View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16151_low_15 (Length: 320)
Name: NF16151_low_15
Description: NF16151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16151_low_15 |
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| [»] scaffold0147 (1 HSPs) |
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Alignment Details
Target: scaffold0147 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0147
Description:
Target: scaffold0147; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 16258 - 16515
Alignment:
| Q |
11 |
cacagaggaaatccataaagatgctaaacagtcattatttcttaataagtactggaaaaccgttatgttttagagatgtgcaattcaatgaagtagtgga |
110 |
Q |
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| T |
16258 |
cacacaggaaatccataaagatgctaaacagtcattatttcttaataagtactggaaaaccgtaatgttttagagatgtgcaattcaatgaagtagtgga |
16357 |
T |
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| Q |
111 |
tcctccgagaggtttaactctcactgtatgcagcatcaaacatcttaatcgagactatagggttatttgaaagtaccgccagtttagtctttgagattgt |
210 |
Q |
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| T |
16358 |
tcctccgagaggtttaactctcactgtatgcagcatcaaacatcttaatcgagactatagggttatttgaaagtaccgccagtttagtctttgagattgt |
16457 |
T |
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| Q |
211 |
acacataacacgatttggtcattgtagcgaaacttcaaaatgatcttaaaataaaatg |
268 |
Q |
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| T |
16458 |
acacataacacgatttggtcattgtagcgaaatttcaaaatgatcttaaaataaaatg |
16515 |
T |
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