View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16152_low_10 (Length: 221)
Name: NF16152_low_10
Description: NF16152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16152_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 35828823 - 35829022
Alignment:
| Q |
16 |
aatattcaagttctagtatacacaaaataaaatgagaccaaatagactcaaatggataaaactgtgcatgtaaaatgtgaaattttgttccttatttata |
115 |
Q |
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| T |
35828823 |
aatattcaagttctagtatacacaaaataaaatgagaccaaatagactcaaatggataaaactgtgcatgtaaaatgtgaaattttgttccttatttata |
35828922 |
T |
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| Q |
116 |
aatattttacccnnnnnnnaaactcggtat---------------ctatagataaattgtagtgtttaattttatttcaaaatagccataggacaggaat |
200 |
Q |
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| T |
35828923 |
aat-ttttaccc-ttttttaaactcagtatctaatcaattatcgactatagataaattgtagtgtttaattttatttcaaaatagccataggacaggaat |
35829020 |
T |
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