View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16152_low_4 (Length: 350)
Name: NF16152_low_4
Description: NF16152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16152_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 13 - 333
Target Start/End: Original strand, 34203852 - 34204171
Alignment:
| Q |
13 |
cataaaaaatggagatatcaataaaaacaagggccctagttaaaaatgtaatcacctttacaaaaaacatgacatgttttatagacttatcttgtataaa |
112 |
Q |
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| T |
34203852 |
cataaaaaatggagatatcaataaaaagaagggcactagttaaaaatgtaatcacctttacaaaa-acatgacatgtcttatagacttatcttgtatgaa |
34203950 |
T |
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| Q |
113 |
tctcaacctatatacattttgaaaaagtagaagaaataaaactgtaaatcactgtgttcattaatcttatgagtctaacttgtaccctacgtagaataag |
212 |
Q |
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| T |
34203951 |
tctcaacctatatacattttgaaaaagtagaagaaataaaactgtaaatcactgtgttcattaatcttatgagtctaacttgtaccctacgtagaataag |
34204050 |
T |
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| Q |
213 |
aaaaataactagttactatttctctgtgtgactggtagatagaatttaatttgtgataatggttgccagatggtagctccatggctttattataagaata |
312 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34204051 |
aaaaataactagttactatttctctgtgtgactggtagatagaatttaatttgtgataatggttgccagatggtagctccatggctttattataagaata |
34204150 |
T |
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| Q |
313 |
aatcactaatataatccgcca |
333 |
Q |
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||||||||||||||||||||| |
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| T |
34204151 |
aatcactaatataatccgcca |
34204171 |
T |
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