View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16152_low_5 (Length: 269)
Name: NF16152_low_5
Description: NF16152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16152_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 27376262 - 27376013
Alignment:
| Q |
1 |
ttaaggtcctattaccctaagtatctttgattataactcactttgtccttctatggcagttgtagagagattggagcaagtggcaatctgagatccatca |
100 |
Q |
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| T |
27376262 |
ttaaggtcctattaccctaagtatctttgattataactcactttgtccttctatggcagttgtagagagattggagcaagtggcaatctgagatccatca |
27376163 |
T |
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| Q |
101 |
agtataggaataagtgaatggactaaggaaatcaaggctgtatcgttgaaagatgctatttcttggagtccagtccaatttttactgttgaactatcata |
200 |
Q |
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| T |
27376162 |
agtataggaataagtgaatggactaaggaaatcaaggctgtatcgttgaaagatgctatttcttggagtcctgtccaatttttactgttgaactatc--a |
27376065 |
T |
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| Q |
201 |
gagtaagattgcaagttaaacgatagtgaaaatttatttgatgaagaattct |
252 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
27376064 |
gagtaagattgcaagttaaacgacagtgaaaatttatttgatgaagaattct |
27376013 |
T |
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