View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16153_low_10 (Length: 277)
Name: NF16153_low_10
Description: NF16153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16153_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 12 - 258
Target Start/End: Original strand, 4132685 - 4132931
Alignment:
| Q |
12 |
acagaacgaactacaatcacaaaatgaaaagctagctacttccaattctcacgaatcacattcattgaagtttgagaactattggctcaaagtcacaccc |
111 |
Q |
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| T |
4132685 |
acagaacgaactacaatcgcaaaatgaaaagctagctacttccaattctcacgaatcacattcattgaagtttgagaactattggctcaaagtcacaccc |
4132784 |
T |
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| Q |
112 |
tccataaagagaaataatccaatagtcagagcacaaatattcccaatcgtttctgcactctgctgagaaagacatcaacgtgctgcgccagaatacaaga |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |
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| T |
4132785 |
tccataaagagaaataatccaatagtcagagcacaaatattcccaatcgtttctgcactctgctgagaaagacatcaacatgctgcgccaaaatacaaga |
4132884 |
T |
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| Q |
212 |
ccgcaaaatagcatagttatacacaccaaaactttatagcgaccttt |
258 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4132885 |
ccgcaaaatagcatagttatacacaccaaaactttatagcgaccttt |
4132931 |
T |
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