View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16157_high_3 (Length: 359)

Name: NF16157_high_3
Description: NF16157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16157_high_3
NF16157_high_3
[»] chr3 (24 HSPs)
chr3 (11-344)||(37092609-37092941)
chr3 (284-344)||(10040500-10040560)
chr3 (279-343)||(15320124-15320188)
chr3 (283-343)||(29135855-29135915)
chr3 (284-343)||(25294903-25294962)
chr3 (284-343)||(26207906-26207965)
chr3 (282-343)||(42412879-42412940)
chr3 (282-343)||(54261167-54261228)
chr3 (284-343)||(48341963-48342022)
chr3 (282-336)||(32873660-32873714)
chr3 (283-333)||(39849014-39849064)
chr3 (283-328)||(29762275-29762320)
chr3 (284-336)||(35315899-35315951)
chr3 (284-331)||(13893869-13893916)
chr3 (284-343)||(45877397-45877456)
chr3 (284-343)||(46529975-46530034)
chr3 (283-334)||(47471774-47471825)
chr3 (284-334)||(11687223-11687273)
chr3 (287-332)||(6462358-6462403)
chr3 (283-336)||(7328786-7328839)
chr3 (284-333)||(10855327-10855376)
chr3 (284-332)||(29127862-29127910)
chr3 (288-344)||(30767351-30767407)
chr3 (284-332)||(40944826-40944874)
[»] chr4 (24 HSPs)
chr4 (284-343)||(47078406-47078465)
chr4 (287-343)||(6032744-6032800)
chr4 (283-343)||(55920981-55921041)
chr4 (284-343)||(1446774-1446833)
chr4 (283-334)||(3574559-3574610)
chr4 (283-342)||(14567198-14567257)
chr4 (284-343)||(29895735-29895794)
chr4 (284-334)||(6779159-6779209)
chr4 (279-336)||(1940885-1940942)
chr4 (282-335)||(27531769-27531822)
chr4 (284-343)||(24166398-24166457)
chr4 (284-343)||(27248376-27248435)
chr4 (284-343)||(34667706-34667765)
chr4 (284-343)||(53599008-53599067)
chr4 (281-343)||(2559252-2559314)
chr4 (282-343)||(38165973-38166034)
chr4 (284-332)||(41162997-41163045)
chr4 (284-336)||(41339506-41339558)
chr4 (284-344)||(52950030-52950090)
chr4 (284-343)||(12703649-12703708)
chr4 (284-332)||(15829647-15829695)
chr4 (284-332)||(19651560-19651608)
chr4 (284-332)||(33647669-33647717)
chr4 (284-332)||(43458561-43458609)
[»] chr7 (23 HSPs)
chr7 (279-344)||(22993470-22993535)
chr7 (284-343)||(43925458-43925517)
chr7 (281-334)||(19914815-19914868)
chr7 (279-343)||(21530689-21530753)
chr7 (279-343)||(34127724-34127788)
chr7 (284-336)||(45447916-45447968)
chr7 (284-343)||(47341822-47341881)
chr7 (284-343)||(48804629-48804688)
chr7 (282-343)||(13095802-13095863)
chr7 (287-343)||(1797409-1797465)
chr7 (284-343)||(4195306-4195365)
chr7 (284-343)||(16802069-16802128)
chr7 (284-343)||(18785615-18785674)
chr7 (287-336)||(5069926-5069975)
chr7 (283-343)||(4228855-4228915)
chr7 (284-343)||(10047980-10048039)
chr7 (284-343)||(39420784-39420843)
chr7 (282-332)||(11607075-11607125)
chr7 (283-333)||(22268143-22268193)
chr7 (286-343)||(34659174-34659231)
chr7 (283-323)||(5039542-5039582)
chr7 (284-336)||(14650263-14650315)
chr7 (283-323)||(22573758-22573798)
[»] chr6 (17 HSPs)
chr6 (279-344)||(5759570-5759635)
chr6 (279-343)||(8612078-8612142)
chr6 (284-343)||(5253327-5253386)
chr6 (284-343)||(21016855-21016914)
chr6 (284-343)||(21898595-21898654)
chr6 (283-332)||(2271416-2271465)
chr6 (282-332)||(24671981-24672031)
chr6 (282-343)||(6606201-6606262)
chr6 (287-332)||(13036119-13036164)
chr6 (279-332)||(14107473-14107526)
chr6 (283-332)||(15643943-15643992)
chr6 (284-333)||(19230671-19230720)
chr6 (283-335)||(9179848-9179900)
chr6 (284-343)||(13468880-13468939)
chr6 (284-333)||(17115011-17115060)
chr6 (284-332)||(3030733-3030781)
chr6 (284-336)||(29444876-29444928)
[»] chr5 (29 HSPs)
chr5 (283-343)||(5732024-5732084)
chr5 (279-343)||(7866520-7866584)
chr5 (284-343)||(6767155-6767214)
chr5 (279-343)||(9812811-9812875)
chr5 (279-343)||(12704953-12705017)
chr5 (283-343)||(28857071-28857131)
chr5 (284-343)||(19572668-19572727)
chr5 (284-343)||(28856921-28856980)
chr5 (284-343)||(42086271-42086330)
chr5 (279-343)||(12766070-12766134)
chr5 (284-344)||(37263185-37263245)
chr5 (283-343)||(41163563-41163623)
chr5 (284-343)||(8513463-8513522)
chr5 (281-343)||(5079272-5079334)
chr5 (283-344)||(20525781-20525842)
chr5 (282-343)||(30349521-30349582)
chr5 (284-332)||(1538375-1538423)
chr5 (287-343)||(20692880-20692936)
chr5 (284-332)||(23383592-23383640)
chr5 (283-343)||(39728330-39728390)
chr5 (282-344)||(20682720-20682783)
chr5 (282-335)||(24875287-24875340)
chr5 (284-333)||(30995065-30995114)
chr5 (284-333)||(35403626-35403675)
chr5 (284-336)||(11845912-11845964)
chr5 (284-332)||(18136395-18136443)
chr5 (284-336)||(20516512-20516564)
chr5 (295-343)||(25417287-25417335)
chr5 (284-344)||(35561921-35561981)
[»] chr8 (21 HSPs)
chr8 (284-343)||(38922518-38922577)
chr8 (282-343)||(2467222-2467283)
chr8 (282-343)||(24837187-24837248)
chr8 (284-343)||(1013081-1013140)
chr8 (284-343)||(10927553-10927612)
chr8 (284-343)||(44893382-44893441)
chr8 (284-343)||(14666175-14666234)
chr8 (284-343)||(18091348-18091407)
chr8 (287-334)||(38235855-38235902)
chr8 (282-336)||(17981386-17981440)
chr8 (282-343)||(15884659-15884720)
chr8 (279-343)||(2964018-2964082)
chr8 (284-332)||(8141049-8141097)
chr8 (284-336)||(34846761-34846813)
chr8 (284-343)||(10535507-10535566)
chr8 (284-343)||(45521116-45521175)
chr8 (284-333)||(583761-583810)
chr8 (284-332)||(7673769-7673816)
chr8 (284-332)||(9860111-9860159)
chr8 (284-332)||(22810027-22810075)
chr8 (284-336)||(24938673-24938725)
[»] chr1 (25 HSPs)
chr1 (283-344)||(8763934-8763995)
chr1 (284-343)||(18915811-18915870)
chr1 (276-343)||(49078050-49078117)
chr1 (283-343)||(41743216-41743276)
chr1 (283-334)||(15238220-15238271)
chr1 (282-344)||(26325754-26325816)
chr1 (282-332)||(40226358-40226408)
chr1 (283-336)||(33418227-33418280)
chr1 (284-332)||(5503975-5504023)
chr1 (284-332)||(5855466-5855514)
chr1 (284-328)||(11398008-11398052)
chr1 (284-343)||(2981036-2981095)
chr1 (282-332)||(18808207-18808257)
chr1 (285-343)||(41663961-41664019)
chr1 (285-335)||(42744732-42744782)
chr1 (283-336)||(9853389-9853441)
chr1 (282-335)||(17642117-17642170)
chr1 (282-323)||(25165344-25165385)
chr1 (283-344)||(43959925-43959986)
chr1 (288-344)||(32819-32875)
chr1 (283-343)||(937590-937650)
chr1 (288-332)||(14357703-14357747)
chr1 (284-344)||(33004119-33004179)
chr1 (284-332)||(40288593-40288641)
chr1 (284-344)||(48798174-48798234)
[»] chr2 (25 HSPs)
chr2 (284-336)||(8410074-8410126)
chr2 (284-343)||(7747217-7747276)
chr2 (284-343)||(18902634-18902693)
chr2 (284-343)||(22593078-22593137)
chr2 (284-343)||(38005345-38005404)
chr2 (282-343)||(33005693-33005754)
chr2 (284-344)||(2550811-2550871)
chr2 (284-336)||(21180425-21180477)
chr2 (284-343)||(331444-331503)
chr2 (284-334)||(41032018-41032068)
chr2 (282-343)||(3643991-3644052)
chr2 (284-333)||(10026730-10026779)
chr2 (282-343)||(29422156-29422217)
chr2 (287-344)||(31596535-31596592)
chr2 (284-333)||(44945537-44945586)
chr2 (284-332)||(42770766-42770814)
chr2 (284-343)||(15079426-15079485)
chr2 (284-323)||(20612660-20612699)
chr2 (300-343)||(41220594-41220637)
chr2 (282-336)||(37805002-37805056)
chr2 (282-343)||(39201612-39201673)
chr2 (284-332)||(10046591-10046639)
chr2 (287-343)||(21286390-21286446)
chr2 (284-332)||(34356149-34356197)
chr2 (287-343)||(37560119-37560175)
[»] scaffold0005 (2 HSPs)
scaffold0005 (283-342)||(250118-250177)
scaffold0005 (284-336)||(271185-271237)
[»] scaffold0002 (2 HSPs)
scaffold0002 (284-343)||(516-575)
scaffold0002 (282-343)||(319367-319427)
[»] scaffold0006 (1 HSPs)
scaffold0006 (279-336)||(68458-68515)
[»] scaffold0384 (1 HSPs)
scaffold0384 (284-343)||(5919-5978)
[»] scaffold0376 (1 HSPs)
scaffold0376 (279-343)||(12611-12675)
[»] scaffold0016 (1 HSPs)
scaffold0016 (284-332)||(8825-8873)
[»] scaffold0209 (1 HSPs)
scaffold0209 (284-333)||(12521-12570)
[»] scaffold0029 (1 HSPs)
scaffold0029 (284-333)||(40990-41039)


Alignment Details
Target: chr3 (Bit Score: 314; Significance: 1e-177; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 11 - 344
Target Start/End: Complemental strand, 37092941 - 37092609
Alignment:
Q  11 caaagggcaggagtaagtttatcttggttgaaaggattacaagttttatgctactaagcatcttaatttttattacatcctgtgagaaattcctatactc 110  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37092941 caaaaggcaggagtaagtttatcttggttgaaaggattacaagttttatgctactaagcatcttaatttttattacatcctgtgagaaattcctatactc 37092842  T
Q  111 atgatcaattggtgaatcttcttctccaaatgatgcatcttttttaggaaatgaagaaggattaagtaagctcgcgttttcgagttctatcacacctctt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37092841 atgatcaattggtgaatcttcttctccaaatgatgcatcttttttaggaaatgaagaaggattaagtaagctcgcgttttcgagttctatcacacctctt 37092742  T
Q  211 ccctctaaagatcccacctgcacaaccatatctttcttaacacaatgatattcctaactatataaagaaagtaaaccaagttgcttgggttccagtggca 310  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  37092741 ccctctaaagatcccacctgcacaaccatatctttcttaacac-atgatattcctaactatataaagaaagtaaaccaagttgcttgggctccagtggca 37092643  T
Q  311 aggagcttcttcccaggacgtacccgtggaatat 344  Q
    ||||||||||||| ||||||||||||||||||||    
T  37092642 aggagcttcttccaaggacgtacccgtggaatat 37092609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 10040500 - 10040560
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||||| ||||||||||||||||| ||||  |||||||||||| |||||||    
T  10040500 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatat 10040560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 15320124 - 15320188
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  15320124 aagtaaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaata 15320188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 29135855 - 29135915
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||| ||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||    
T  29135855 aaaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaata 29135915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 25294903 - 25294962
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 25294962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 26207965 - 26207906
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||    
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaata 26207906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 42412940 - 42412879
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| |||| |||||||||||| ||||| |||||||| ||| ||||||    
T  42412940 taaaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaata 42412879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 54261167 - 54261228
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| | ||||||    
T  54261167 taaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaata 54261228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 48341963 - 48342022
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||||||||| | ||||||    
T  48341963 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaata 48342022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 32873714 - 32873660
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||||| ||||| |||||||||||||||||  |||| ||||||||||||    
T  32873714 taaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccg 32873660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 333
Target Start/End: Original strand, 39849014 - 39849064
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    ||||||||| ||||||| ||||||||||||||||| ||||| |||||||||    
T  39849014 aaaccaagtcgcttgggctccagtggcaaggagctccttccaaggacgtac 39849064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 328
Target Start/End: Complemental strand, 29762320 - 29762275
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccagga 328  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  29762320 aaaccaagttgcttgggctccagtggcaaggagctccttccaagga 29762275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 35315899 - 35315951
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||||    
T  35315899 aaccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccg 35315951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 331
Target Start/End: Original strand, 13893869 - 13893916
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgt 331  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgt 13893916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 45877397 - 45877456
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| ||||||||||||||||  ||||| |||||||| ||| ||||||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaata 45877456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 46530034 - 46529975
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| ||||||||||||||||| ||| | |||||||||| | ||||||    
T  46530034 aaccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaata 46529975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 283 - 334
Target Start/End: Original strand, 47471774 - 47471825
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    ||||||||||||||||| || |||||||| ||||| ||||| ||||||||||    
T  47471774 aaaccaagttgcttgggctctagtggcaaagagctccttccaaggacgtacc 47471825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 11687273 - 11687223
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    |||||||||| ||||| |||||||||||| |||| ||||| ||||||||||    
T  11687273 aaccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacc 11687223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 332
Target Start/End: Original strand, 6462358 - 6462403
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    ||||||||||||| || |||||||||||||| ||||| ||||||||    
T  6462358 caagttgcttgggctctagtggcaaggagctccttccaaggacgta 6462403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 7328786 - 7328839
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||||||||| | || |||||||||||| | ||||| ||||||||||||    
T  7328786 aaaccaagttgcttgtgctctagtggcaaggagttccttccaaggacgtacccg 7328839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 10855327 - 10855376
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||| ||||    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtac 10855376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 29127862 - 29127910
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||| | ||||| ||||||||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgta 29127910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 30767407 - 30767351
Alignment:
Q  288 aagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||| ||||||||||||||| | ||||| |||| ||||| | |||||||    
T  30767407 aagttgcttgggctccagtggcaaggagttccttccaaggatgtacctggggaatat 30767351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 40944826 - 40944874
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| ||| |||||||| |||| ||||| ||||||||    
T  40944826 aaccaagttgcttgggctccggtggcaagaagctccttccaaggacgta 40944874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 47078406 - 47078465
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaata 47078465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 6032800 - 6032744
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  6032800 caagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 6032744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 55920981 - 55921041
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||    
T  55920981 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaata 55921041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 1446774 - 1446833
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 1446833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 3574610 - 3574559
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  3574610 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacc 3574559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 342
Target Start/End: Original strand, 14567198 - 14567257
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaat 342  Q
    ||||||||||||||||| |||||||||||||||||  |||| |||||||||||| |||||    
T  14567198 aaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 14567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 29895735 - 29895794
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 29895794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 6779159 - 6779209
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    |||||||||| ||||| ||||||||||||||||||||||| ||||||||||    
T  6779159 aaccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacc 6779209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 1940942 - 1940885
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||    
T  1940942 aagtaaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccg 1940885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 27531822 - 27531769
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtaccc 335  Q
    |||||||||||||||||  ||||||||||||||||| ||||| |||||||||||    
T  27531822 taaaccaagttgcttggactccagtggcaaggagctccttccaaggacgtaccc 27531769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 24166398 - 24166457
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||| || ||||||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaata 24166457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 27248376 - 27248435
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||| ||||| ||||| |||||||| ||| ||||||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaata 27248435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 34667765 - 34667706
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| || |||||||||||||| ||||| |||||||||||| ||||||    
T  34667765 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaata 34667706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 53599008 - 53599067
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| |||| |||||||||||| ||||| |||||||||||| ||||||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaata 53599067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 2559252 - 2559314
Alignment:
Q  281 gtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||| ||||| ||||||||||| ||||| ||||| |||||||||| | ||||||    
T  2559252 gtaaaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaata 2559314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 38165973 - 38166034
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||| ||||| |||| |||||||||||| ||||| |||||||| ||| ||||||    
T  38165973 taaaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaata 38166034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 41163045 - 41162997
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgta 41162997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 41339558 - 41339506
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||| ||||| || |||||||||||||| ||||| ||||||||||||    
T  41339558 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccg 41339506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 52950030 - 52950090
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||| ||||| || |||||||||||||| ||||| |||||||||| | |||||||    
T  52950030 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatat 52950090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 12703708 - 12703649
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||| | ||||  ||||||||| || ||||||    
T  12703708 aaccaagttgcttgggctccagtggcaaggagatccttcaaaggacgtactcgaggaata 12703649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 15829647 - 15829695
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||| ||||||||||||| | ||||||||    
T  15829647 aaccaagttgtttgggctccagtgacaaggagcttctttcaaggacgta 15829695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 19651608 - 19651560
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| ||||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgta 19651560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 33647669 - 33647717
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| || |||||||||||||| ||| | ||||||||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgta 33647717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 43458561 - 43458609
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| |||||||||||| ||||  |||| ||||||||    
T  43458561 aaccaagttgcttgggctccagtggcaagaagctcattccaaggacgta 43458609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 4e-17; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 22993535 - 22993470
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||| |||||||    
T  22993535 aagtaaaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatat 22993470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 43925458 - 43925517
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 43925517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 281 - 334
Target Start/End: Complemental strand, 19914868 - 19914815
Alignment:
Q  281 gtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  19914868 gtaaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacc 19914815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 21530689 - 21530753
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| |||||||||| | ||||||    
T  21530689 aagtaaaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaata 21530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 34127788 - 34127724
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||||||| |||| ||||||||| || ||||| |||||||||||| ||||||    
T  34127788 aagtaaaccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaata 34127724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 45447916 - 45447968
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  45447916 aaccaagttgcttgggttctagtggcaaggagctccttccaaggacgtacccg 45447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 47341822 - 47341881
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| |||||||||||||||||  |||| |||||||||||| ||||||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaata 47341881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 48804629 - 48804688
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 48804688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 13095802 - 13095863
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| ||| ||||||||||||| ||| | |||||||||||| ||||||    
T  13095802 taaaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaata 13095863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 1797409 - 1797465
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  1797409 caagttgcttgggctccagtggcaaggagctccttccaaggacgtatccgaggaata 1797465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 4195365 - 4195306
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| || || |||||||| ||| ||||||    
T  4195365 aaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaata 4195306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 16802069 - 16802128
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||| |||| ||||||||||| ||||| ||||| |||||||||||| ||||||    
T  16802069 aaccaagttgcctgggctccagtggcaatgagctccttccaaggacgtacccggggaata 16802128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 18785615 - 18785674
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||| |||| |||||||||||| |||| ||||| |||||||||||| ||||||    
T  18785615 aaccaagttgcatgggctccagtggcaagaagctccttccaaggacgtacccggggaata 18785674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 336
Target Start/End: Complemental strand, 5069975 - 5069926
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  5069975 caagttgtttgggctccagtggcaaggagcttcttctaaggacgtacccg 5069926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 4228915 - 4228855
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||| ||||| ||||| ||||||||||| ||||| |||||||| ||| ||||||    
T  4228915 aaaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaata 4228855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 10048039 - 10047980
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||   ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  10048039 aaccaagttgcttgaactccagtggcaaggagctccttccaaggacgtatccggggaata 10047980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 39420784 - 39420843
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| || |||||||||||||| ||| | |||| ||||||| ||||||    
T  39420784 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaata 39420843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 11607075 - 11607125
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||| ||||||||||||| |||||||||||||| || ||||| ||||||||    
T  11607075 taaatcaagttgcttgggctccagtggcaaggaactccttccaaggacgta 11607125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 333
Target Start/End: Complemental strand, 22268193 - 22268143
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    ||||||||||| ||||| |||||||||||||||||  |||| |||||||||    
T  22268193 aaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtac 22268143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 343
Target Start/End: Original strand, 34659174 - 34659231
Alignment:
Q  286 ccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||| ||||| ||||||||||||||||| |||||  ||| ||||||| ||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaata 34659231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Complemental strand, 5039582 - 5039542
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcc 323  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  5039582 aaaccaagttgtttgggctccagtggcaaggagctccttcc 5039542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 14650263 - 14650315
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||| ||||  || |||||||||||||| ||||| ||||||||||||    
T  14650263 aaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccg 14650315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 323
Target Start/End: Original strand, 22573758 - 22573798
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcc 323  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  22573758 aaaccaagttgcttgggctccagtagcaagaagcttcttcc 22573798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 4e-17; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 5759570 - 5759635
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    ||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||| |||||||    
T  5759570 aagtaaaccaagttgcttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatat 5759635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 8612142 - 8612078
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  8612142 aagtaaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaata 8612078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 5253386 - 5253327
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| |||| |||||||||||| ||||| |||||||||||| ||||||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaata 5253327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 21016914 - 21016855
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| |||||  ||||||||||| ||||||    
T  21016914 aaccaagttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaata 21016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 21898595 - 21898654
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 21898654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 2271465 - 2271416
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  2271465 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgta 2271416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 24672031 - 24671981
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||||| ||||||||||||||||| ||| | ||||||||    
T  24672031 taaaccaagttgcttgggctccagtggcaaggagctcctttcaaggacgta 24671981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 6606262 - 6606201
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||||   ||||||||||||||| ||||| |||||||| ||| ||||||    
T  6606262 taaaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaata 6606201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 332
Target Start/End: Complemental strand, 13036164 - 13036119
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  13036164 caagttgcttgggctccagtggcaaggagctccttccaaggacgta 13036119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 332
Target Start/End: Complemental strand, 14107526 - 14107473
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||| | ||||||    
T  14107526 aagtaaaccaagttgtttgggctccagtggcaaggagctccttccaaagacgta 14107473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 332
Target Start/End: Complemental strand, 15643992 - 15643943
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    ||||||||||||||||| |||||||||||||||||  |||| ||||||||    
T  15643992 aaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgta 15643943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 19230720 - 19230671
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||||||||    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtac 19230671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 335
Target Start/End: Complemental strand, 9179900 - 9179848
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtaccc 335  Q
    ||||||||||| ||||| |||||||||||||||||  |||| |||||||||||    
T  9179900 aaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtaccc 9179848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 13468880 - 13468939
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||  ||||||||||||| ||||| |||||||| ||| ||||||    
T  13468880 aaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtatccggggaata 13468939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 17115060 - 17115011
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||| ||||||||| |||||||||||| |||| ||||| |||||||||    
T  17115060 aaccaaattgcttgggctccagtggcaagaagctccttccaaggacgtac 17115011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 3030781 - 3030733
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| |||||||||||||||||  |||| ||||||||    
T  3030781 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgta 3030733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 29444928 - 29444876
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||| |||||| || |||||||||||||| ||||| | ||||||||||    
T  29444928 aaccaagttacttgggctctagtggcaaggagctccttccaaagacgtacccg 29444876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 5732084 - 5732024
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  5732084 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 5732024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 7866520 - 7866584
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  7866520 aagtaaaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaata 7866584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 6767214 - 6767155
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  6767214 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 6767155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 9812811 - 9812875
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  9812811 aagtaaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaata 9812875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 12704953 - 12705017
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||| ||||  ||||||||||||||||| ||||| |||||||||||| ||||||    
T  12704953 aagtaaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaata 12705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 28857071 - 28857131
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||    
T  28857071 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaata 28857131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 19572668 - 19572727
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 19572727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 28856921 - 28856980
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||    
T  28856921 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaata 28856980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 42086271 - 42086330
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||| ||||||||||||| ||||| |||||||||||| ||||||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaata 42086330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 12766070 - 12766134
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||| ||||  || |||||||||||||| ||||| |||||||||||| ||||||    
T  12766070 aagtaaaccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaata 12766134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 37263185 - 37263245
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||||| ||||||||||||||| | ||||  |||||||||||| |||||||    
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatat 37263245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 41163623 - 41163563
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| || ||||||||| ||||||    
T  41163623 aaaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaata 41163563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 8513463 - 8513522
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||  || |||||||||||||| ||||| |||||||||||| ||||||    
T  8513463 aaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaata 8513522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 343
Target Start/End: Original strand, 5079272 - 5079334
Alignment:
Q  281 gtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||| ||||||||| ||||||| ||||| ||||| || ||||| ||||||||||    
T  5079272 gtaaaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaata 5079334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 20525781 - 20525842
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    ||||||||||||||||| ||||||||||||||||| ||| | |||| ||| ||| |||||||    
T  20525781 aaaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatat 20525842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 30349521 - 30349582
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||| ||||| ||||||||||||||| | ||||| |||||||| ||| ||||||    
T  30349521 taaaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaata 30349582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 1538375 - 1538423
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgta 1538423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 20692880 - 20692936
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||| ||||| || |||||||| ||||||||||| |||||||||||| ||||||    
T  20692880 caagttgtttgggctctagtggcaaagagcttcttccaaggacgtacccggggaata 20692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 23383592 - 23383640
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 23383640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 39728330 - 39728390
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||| ||||| |||||||||||||||||  |||| || ||||||||| ||||||    
T  39728330 aaaccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaata 39728390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 20682783 - 20682720
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttc-ttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||||||| ||||||| ||||||||| | |||  |||||||||||| |||||||    
T  20682783 taaaccaagttgcttgggctccagtgacaaggagctccattctaaggacgtacccggggaatat 20682720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 24875287 - 24875340
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtaccc 335  Q
    ||||||||||| |||||| || || |||||||||||| |||| |||||||||||    
T  24875287 taaaccaagttacttgggctctagcggcaaggagcttattccaaggacgtaccc 24875340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 30995065 - 30995114
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    ||||||||||| ||||||  |||||||||||||| ||||| |||||||||    
T  30995065 aaccaagttgcctgggttttagtggcaaggagctccttccaaggacgtac 30995114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 35403675 - 35403626
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||| ||| ||||| ||||||||||||||||| ||||| |||||||||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtac 35403626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 11845964 - 11845912
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||| |||||| | ||| |||||||||||||| ||||| ||||||||||||    
T  11845964 aaccaatttgctttgattctagtggcaaggagctccttccaaggacgtacccg 11845912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 18136443 - 18136395
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||||| ||||| | ||||||    
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgta 18136395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 20516564 - 20516512
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||| |||||||||||| |||| ||||||||||||| | ||||| ||||||    
T  20516564 aaccaaattgcttgggttctagtgacaaggagcttctttcaaggacatacccg 20516512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 343
Target Start/End: Complemental strand, 25417335 - 25417287
Alignment:
Q  295 ttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||| ||||||||||||||||| ||||| ||||||||| || ||||||    
T  25417335 ttgggctccagtggcaaggagctccttccaaggacgtactcggggaata 25417287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 35561981 - 35561921
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||||  ||||||||||| ||||| ||||| | |||||| ||| |||||||    
T  35561981 aaccaagttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaatat 35561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 38922577 - 38922518
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 38922518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 2467283 - 2467222
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  2467283 taaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 2467222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 24837187 - 24837248
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| ||||||||||||||||| ||||| || ||||||||| ||||||    
T  24837187 taaaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaata 24837248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 1013140 - 1013081
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| |||||||||||||||||| |||| |||||||| ||| ||||||    
T  1013140 aaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaata 1013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 10927553 - 10927612
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| | ||||||||||||||||||| | |||||||||||| ||||||    
T  10927553 aaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaata 10927612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 44893441 - 44893382
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 44893382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 14666234 - 14666175
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| |||||||||||||||||  |||| |||||||| ||| ||||||    
T  14666234 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaata 14666175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 18091348 - 18091407
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| |||||||||||||||||| |||| |||||| ||||||| ||||    
T  18091348 aaccaagttgtttgggctccagtggcaaggagcttattccaaggacgcacccgtgaaata 18091407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 38235855 - 38235902
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  38235855 caagttgcttgggctccagtggcaaggaacttcttccaaggacgtacc 38235902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 336
Target Start/End: Original strand, 17981386 - 17981440
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||| |||||||||||| ||||||||||||||||| ||||| |||| |||||||    
T  17981386 taaactaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccg 17981440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 15884720 - 15884659
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||| ||||| |||||||| |||||||| ||||| |||||||||| | ||||||    
T  15884720 taaaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaata 15884659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 2964018 - 2964082
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||||||  || ||||||||| |||| ||||| || ||||||||| ||||||    
T  2964018 aagtaaaccaagttgcttggactctagtggcaagtagctccttccaagaacgtacccggggaata 2964082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 8141049 - 8141097
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgta 8141097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 34846761 - 34846813
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||| ||||| |||||||||||||||||  |||| ||||||||||||    
T  34846761 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccg 34846813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 10535566 - 10535507
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||  ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  10535566 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaata 10535507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 45521116 - 45521175
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||| |  |||| |||| ||||||| ||||||    
T  45521116 aaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaata 45521175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 583761 - 583810
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||| ||||| || |||||||||||||| ||||| |||||||||    
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtac 583810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 7673816 - 7673769
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    ||||||||||||||| | |||||||||||||||| ||||| ||||||||    
T  7673816 aaccaagttgcttggct-ccagtggcaaggagctccttccaaggacgta 7673769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 9860159 - 9860111
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| ||||||||    
T  9860159 aaccaagttgtttgggatccagtggcaaagagctccttccaaggacgta 9860111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 22810027 - 22810075
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| || |||||||||||||| ||||| ||||||||    
T  22810027 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgta 22810075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 24938725 - 24938673
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||| ||||| ||||||||||||||||| | ||| ||||| ||||||    
T  24938725 aaccaagttgtttgggctccagtggcaaggagctccctccaaggacatacccg 24938673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 283 - 344
Target Start/End: Original strand, 8763934 - 8763995
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    ||||||||||||||||| ||| ||||||||||||| ||||| |||||||||||| |||||||    
T  8763934 aaaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatat 8763995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 18915811 - 18915870
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| | ||||||||||||||||||||| |||||||||||| ||||||    
T  18915811 aaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaata 18915870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 49078050 - 49078117
Alignment:
Q  276 agaaagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||  |||||||| ||| ||||||    
T  49078050 agaaagaaaaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaata 49078117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 283 - 343
Target Start/End: Original strand, 41743216 - 41743276
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||| ||| ||||||||||||| ||||| |||||||| ||| ||||||    
T  41743216 aaaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtatccgaggaata 41743276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 283 - 334
Target Start/End: Complemental strand, 15238271 - 15238220
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    ||||||||||||||||| |||| |||||||||||| ||||| ||||||||||    
T  15238271 aaaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacc 15238220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 26325754 - 26325816
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||| ||| ||||||||||||||||| ||| | |||||||| ||| |||||||    
T  26325754 taaaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatat 26325816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 332
Target Start/End: Complemental strand, 40226408 - 40226358
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||| ||||||| ||||||||||||||| ||||| ||||||||    
T  40226408 taaaccaagttgattgggtttcagtggcaaggagctccttccaaggacgta 40226358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 33418280 - 33418227
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| | ||||||||||    
T  33418280 aaaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccg 33418227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 5503975 - 5504023
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||||||||||||||||||||| ||||| || |||||    
T  5503975 aaccaagttgtttgggttccagtggcaaggagctccttccgagaacgta 5504023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 5855466 - 5855514
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 5855514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 11398052 - 11398008
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccagga 328  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||    
T  11398052 aaccaagttgcttgggctccagtggcaaggagctccttccaagga 11398008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 2981095 - 2981036
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| || |||||||||||||| |||||  ||||||| ||| ||||||    
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaata 2981036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 18808207 - 18808257
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||| ||||| ||||||||||| ||| ||||||| ||||||||    
T  18808207 taaaccaagttgtttgggctccagtggcaatgagtttcttccaaggacgta 18808257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 343
Target Start/End: Complemental strand, 41664019 - 41663961
Alignment:
Q  285 accaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||| ||||| ||||||||||||||||| ||||  |||||||| ||| ||||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaata 41663961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 335
Target Start/End: Original strand, 42744732 - 42744782
Alignment:
Q  285 accaagttgcttgggttccagtggcaaggagcttcttcccaggacgtaccc 335  Q
    ||||||||||||||  ||||||||||| ||||| ||||| |||||||||||    
T  42744732 accaagttgcttggactccagtggcaatgagctccttccaaggacgtaccc 42744782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 9853441 - 9853389
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| |||| |||||||    
T  9853441 aaaccaagttg-ttgggctccagtggcaaggagctccttccaaggatgtacccg 9853389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Complemental strand, 17642170 - 17642117
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtaccc 335  Q
    |||||||||||| ||||| ||||||| ||||||||| |||||  ||||||||||    
T  17642170 taaaccaagttgtttgggctccagtgacaaggagctccttccacggacgtaccc 17642117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 323
Target Start/End: Original strand, 25165344 - 25165385
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcc 323  Q
    |||||||||||||||||| || |||||||||||||| |||||    
T  25165344 taaaccaagttgcttgggctctagtggcaaggagctccttcc 25165385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 344
Target Start/End: Complemental strand, 43959986 - 43959925
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||| |||||| ||||| ||||||||||||| ||| ||||| | |||||||||| |||||||    
T  43959986 aaactaagttgattgggctccagtggcaaggtgctccttccaatgacgtacccggggaatat 43959925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 32819 - 32875
Alignment:
Q  288 aagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||| ||||| ||||||||||| ||||| ||||| |||||||||| | |||||||    
T  32819 aagttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatat 32875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 937650 - 937590
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||| ||||| ||||||| ||| ||||||||| | ||||||||| || ||||||    
T  937650 aaaccaagttgtttgggctccagtgacaatgagcttctttcaaggacgtactcgaggaata 937590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 14357703 - 14357747
Alignment:
Q  288 aagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| | ||||||||||||||| ||||||| ||||||||    
T  14357703 aagttgcttgagctccagtggcaaggagtttcttccaaggacgta 14357747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 33004179 - 33004119
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||||| |||||||   ||||||| ||||| |||||||| ||| |||||||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaatat 33004119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 40288641 - 40288593
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| || ||||||||||||||  |||| ||||||||    
T  40288641 aaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgta 40288593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 48798234 - 48798174
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||| | ||| ||||||||||||||||| ||||| | |||||| ||| |||||||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatat 48798174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 8410074 - 8410126
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccg 8410126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 7747217 - 7747276
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaata 7747276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 18902693 - 18902634
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||||||||| ||||| ||||||||| || ||||||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaata 18902634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 22593078 - 22593137
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||| | ||||||||||||||||| ||||| |||||||||||| ||||||    
T  22593078 aaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaata 22593137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 38005345 - 38005404
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||| ||||| ||||||||||||||||| ||||| |||||||||||| ||||||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaata 38005404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 33005693 - 33005754
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||| ||||||||| |||||||||||||||||  || | |||||||||||||||||||    
T  33005693 taaaccaaattgcttgggctccagtggcaaggagctcatttctaggacgtacccgtggaata 33005754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 2550811 - 2550871
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||||||| ||||||||||||||||| ||| | |||||||| ||| |||||||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatat 2550871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 21180477 - 21180425
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccg 21180425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 331444 - 331503
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||||||||||| |||||  |||| |||||||||||| ||||||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaata 331503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 41032068 - 41032018
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacc 334  Q
    |||||| ||||||||| ||||||||||||||||| ||||| ||||||||||    
T  41032068 aaccaaattgcttgggctccagtggcaaggagctccttccaaggacgtacc 41032018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 3644052 - 3643991
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| |||||||| ||||||||  |||| |||||||| ||| ||||||    
T  3644052 taaaccaagttgcttgggctccagtggaaaggagctcattccaaggacgtatccggggaata 3643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Complemental strand, 10026779 - 10026730
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||||||||| |||| |||||||||||| ||||| |||||||||    
T  10026779 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtac 10026730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 29422156 - 29422217
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||| ||||| |||||| |||||||||| ||| | |||||||||||| ||||||    
T  29422156 taaaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaata 29422217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 31596592 - 31596535
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaatat 344  Q
    |||||||||||| |||||||||||||||||| ||||| | |||||| |||| ||||||    
T  31596592 caagttgcttggattccagtggcaaggagctccttccaaagacgtatccgtagaatat 31596535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 44945537 - 44945586
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||    
T  44945537 aaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtac 44945586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 42770814 - 42770766
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgta 42770766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 15079426 - 15079485
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| ||| |||||||||| |  ||||| |||||||||||| ||||||    
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaata 15079485  T

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Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 20612699 - 20612660
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcc 323  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttcc 20612660  T

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Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 300 - 343
Target Start/End: Original strand, 41220594 - 41220637
Alignment:
Q  300 ttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||    
T  41220594 ttccagtggcaaggagctccttccaaggacgtacccggggaata 41220637  T

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Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 37805056 - 37805002
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||||||||||| | |||||||||||| || || || ||||||||||||    
T  37805056 taaaccaagttgcttgggctacagtggcaaggaactcctcccaaggacgtacccg 37805002  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Complemental strand, 39201673 - 39201612
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||| ||||| |  |||||||||||||| ||||| ||||||||| || ||||||    
T  39201673 taaaccaagttgattgggctatagtggcaaggagctccttccaaggacgtactcgaggaata 39201612  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 10046639 - 10046591
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||||||||| |||| |||||||||||| ||||| || |||||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgta 10046591  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 21286390 - 21286446
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||| ||| | ||||||||||||||||| ||||| |||||||| ||| ||||||    
T  21286390 caagttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaata 21286446  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 332
Target Start/End: Original strand, 34356149 - 34356197
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| |||||||||||||||||  |||| ||||||||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgta 34356197  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 343
Target Start/End: Original strand, 37560119 - 37560175
Alignment:
Q  287 caagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||| ||||| |||||||| ||| |||| ||||| |||||||||||| ||||||    
T  37560119 caagttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaata 37560175  T

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Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 250177 - 250118
Alignment:
Q  283 aaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaat 342  Q
    ||||||||||||||||| |||||||||||||||||  |||| |||||||||||| |||||    
T  250177 aaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 250118  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 271237 - 271185
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    |||||||||||||||| ||  ||||||||||||| ||||| ||||||||||||    
T  271237 aaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtacccg 271185  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 516 - 575
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||||| || |||||||||||||| ||||| |||||||||||| ||||||    
T  516 aaccaagttgcttgggctctagtggcaaggagctccttccaaggacgtacccggggaata 575  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 319367 - 319427
Alignment:
Q  282 taaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    |||||||||||||| || | |||||||||||||||| ||||| |||||||| ||| ||||||    
T  319367 taaaccaagttgctaggct-ccagtggcaaggagctccttccaaggacgtatccggggaata 319427  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 68458 - 68515
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccg 336  Q
    ||||||||||||||| ||||| || |||||||||||||| ||||| ||||||||||||    
T  68458 aagtaaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccg 68515  T

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Target: scaffold0384 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 284 - 343
Target Start/End: Original strand, 5919 - 5978
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||||| |||||||||||||| ||| | ||| |||||||| ||||||    
T  5919 aaccaagttgcttgggttctagtggcaaggagctcctttcaagggcgtacccggggaata 5978  T

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Target: scaffold0376 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 12611 - 12675
Alignment:
Q  279 aagtaaaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtacccgtggaata 343  Q
    ||||||||||||||||||||  || ||||||||| |||| ||||| ||||||| |||| ||||||    
T  12611 aagtaaaccaagttgcttggactctagtggcaagaagctccttccaaggacgtgcccggggaata 12675  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 332
Target Start/End: Complemental strand, 8873 - 8825
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgta 332  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 8825  T

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Target: scaffold0209 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 12521 - 12570
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||| ||||| || |||||||||||||| ||||| |||||||||    
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtac 12570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 333
Target Start/End: Original strand, 40990 - 41039
Alignment:
Q  284 aaccaagttgcttgggttccagtggcaaggagcttcttcccaggacgtac 333  Q
    |||||||||| ||||| ||||||||||||||||| |||||  ||||||||    
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtac 41039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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