View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16159_high_16 (Length: 299)
Name: NF16159_high_16
Description: NF16159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16159_high_16 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 8553671 - 8553387
Alignment:
| Q |
1 |
tgaacatgaaaagagggaacactgctgtaatccagacaaagccatgggaacaggaacccggcaaccttacctcaactcttaggtggattggagtttttgt |
100 |
Q |
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| T |
8553671 |
tgaacatgaaaagagggaacactgctgtaatccagacaaagccatgggaacaggaacccggcaaccttacctcaactcttaggtggattggagtttttgt |
8553572 |
T |
|
| Q |
101 |
tggattctacctttgttaactcccaacaacaacatctttctttgttacttccaaattattaaacc--atatgaggccagctgtttaatttatcatagttt |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
8553571 |
tggattctacctttgttaactcccaacaacaacatctttctttgttacttccaaattattaaaccatatatgaggccagctgtttaatttatcatagttt |
8553472 |
T |
|
| Q |
199 |
cttaatgcatgacatatcttgagtttaatatcttggcaactagcatatactagtagtagtaattattgttatgccaaagatattg |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8553471 |
cttaatgcatgacatatcttgagtttaatatcttggcaactagcatatactagtagtagtaattattgttatgccaaagatattg |
8553387 |
T |
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