View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16159_high_6 (Length: 487)
Name: NF16159_high_6
Description: NF16159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16159_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 435; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 10 - 468
Target Start/End: Complemental strand, 37338021 - 37337563
Alignment:
| Q |
10 |
ataatacttacttcacctattcacaaatatatcactatggctaactccaaaaccctattatgcctaaccttcttcacaacctttctcttttcttcctttg |
109 |
Q |
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| T |
37338021 |
ataatactaacttcacctattcacaaatatatcactatggctaactccaaaaccctattatgcctaaccttcttcacaacctttctcttttcttcctttg |
37337922 |
T |
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| Q |
110 |
ttaacgccacttactaccaaaatatttctccatcataccttggtttcaaacaagagaaacttactcacatccattttttcttgcatgacatcgtttctgg |
209 |
Q |
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| T |
37337921 |
ttaacgccacttactaccaaaatatttctccatcataccttggtttcaaacaagagaaactcactcacatccattttttcttgcatgacatcgtttctgg |
37337822 |
T |
|
| Q |
210 |
cccaaagcctaccgtagtcatatcagctgaatcgcccttaaacggtaaatccaaatcacccttaccatttggctccatagtggttttggaggacccatta |
309 |
Q |
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| T |
37337821 |
cccaaagcctaccgtagtcatatcagctgaatcacccttaaacggtaaatccaaatcacccttaccatttggctccatagtggttttggaggacccatta |
37337722 |
T |
|
| Q |
310 |
accgttggacctgaccttaaatctacacaaattggaaaagcacaaggtttttatctaacagtgtctcaagaagctgtgcttgaattggaacttgttatgg |
409 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37337721 |
accgttggacctgaccttaaatctacacaaattggaaaagcacaaggtttttacctaacagtgtctcaagaagctgtgcttgaattggaacttgttatgg |
37337622 |
T |
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| Q |
410 |
gcatgacctttgcgtttacggaagggaaattcaatggtagcacgcttagtgtgttaggg |
468 |
Q |
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||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |
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| T |
37337621 |
gcatgacctttgcgtttacggaaggaaaattcaacggtagcacgcttagtgtgttaggg |
37337563 |
T |
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