View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16160_low_18 (Length: 216)
Name: NF16160_low_18
Description: NF16160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16160_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 37807393 - 37807570
Alignment:
| Q |
16 |
aatatattaggagtattttcaaataaattcattgattttagtgtttttaatttttctttcatnnnnnnncgtgagtgagtaactcagaagaggagatacg |
115 |
Q |
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| T |
37807393 |
aatatatcaggagtattttcaaataaattcattgattttagtgtttttaatttttctttcataaaaaaacgtgagtgagtaactcacaagaggagatacg |
37807492 |
T |
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| Q |
116 |
tactacttatagacattagacatatagaagatatatgtctctctgtgcttcgattgttctctctaagattattatata |
193 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37807493 |
tactacttatagacattagacatatagatgatatatgtctctctgtgcttcgattgttctctctaagattattatata |
37807570 |
T |
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