View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16161_low_1 (Length: 477)

Name: NF16161_low_1
Description: NF16161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16161_low_1
NF16161_low_1
[»] chr6 (42 HSPs)
chr6 (1-129)||(13853598-13853726)
chr6 (1-129)||(8382974-8383102)
chr6 (1-127)||(2830334-2830460)
chr6 (1-127)||(11572150-11572276)
chr6 (1-127)||(35031006-35031132)
chr6 (1-126)||(6330115-6330240)
chr6 (1-126)||(26602323-26602448)
chr6 (1-127)||(8099529-8099655)
chr6 (3-128)||(33052801-33052926)
chr6 (1-129)||(6068563-6068691)
chr6 (1-126)||(9644696-9644821)
chr6 (1-126)||(9650713-9650838)
chr6 (3-127)||(6143553-6143677)
chr6 (5-111)||(8417802-8417908)
chr6 (7-110)||(28747145-28747248)
chr6 (5-96)||(17992018-17992109)
chr6 (4-74)||(22896514-22896584)
chr6 (34-126)||(13043758-13043850)
chr6 (1-130)||(3788032-3788162)
chr6 (30-114)||(6068974-6069058)
chr6 (8-67)||(7596989-7597048)
chr6 (1-114)||(14936462-14936575)
chr6 (11-107)||(6549902-6549997)
chr6 (4-52)||(8186441-8186489)
chr6 (11-130)||(3421588-3421707)
chr6 (1-42)||(2830340-2830381)
chr6 (1-42)||(6330120-6330161)
chr6 (1-42)||(8099535-8099576)
chr6 (1-42)||(8383053-8383094)
chr6 (1-42)||(11572229-11572270)
chr6 (1-50)||(14936533-14936582)
chr6 (1-42)||(26602328-26602369)
chr6 (1-42)||(33052878-33052919)
chr6 (2-50)||(31849586-31849634)
chr6 (15-63)||(33393165-33393213)
chr6 (6-112)||(5685353-5685459)
chr6 (1-42)||(6143559-6143600)
chr6 (5-42)||(13853677-13853714)
chr6 (1-42)||(35031085-35031126)
chr6 (1-37)||(9644701-9644737)
chr6 (1-37)||(9650718-9650754)
chr6 (1-37)||(22896476-22896512)
[»] chr5 (42 HSPs)
chr5 (1-128)||(36563543-36563670)
chr5 (1-126)||(9395350-9395475)
chr5 (1-126)||(11795168-11795293)
chr5 (1-129)||(37148960-37149088)
chr5 (1-127)||(23359941-23360067)
chr5 (1-127)||(41989412-41989538)
chr5 (1-127)||(13103023-13103149)
chr5 (1-128)||(17025622-17025749)
chr5 (1-127)||(13033050-13033176)
chr5 (1-130)||(20848070-20848198)
chr5 (1-126)||(26350355-26350480)
chr5 (1-129)||(37641950-37642079)
chr5 (1-128)||(4443958-4444085)
chr5 (16-129)||(582986-583099)
chr5 (1-99)||(21575973-21576071)
chr5 (1-105)||(6126845-6126949)
chr5 (48-127)||(38361743-38361822)
chr5 (38-114)||(13539909-13539981)
chr5 (12-121)||(40138806-40138916)
chr5 (10-74)||(2366352-2366416)
chr5 (1-68)||(966206-966273)
chr5 (8-63)||(9006894-9006949)
chr5 (2-112)||(3549553-3549663)
chr5 (13-109)||(2629561-2629657)
chr5 (4-68)||(36595782-36595846)
chr5 (1-42)||(9395355-9395396)
chr5 (1-42)||(13033056-13033097)
chr5 (1-42)||(13103029-13103070)
chr5 (1-42)||(37149039-37149080)
chr5 (9-93)||(39290807-39290891)
chr5 (5-74)||(35904451-35904518)
chr5 (1-42)||(582994-583035)
chr5 (5-42)||(4443969-4444006)
chr5 (1-42)||(11795173-11795214)
chr5 (80-129)||(13033135-13033184)
chr5 (3-40)||(13539949-13539986)
chr5 (1-42)||(17025629-17025670)
chr5 (1-42)||(20848079-20848120)
chr5 (1-42)||(23359947-23359988)
chr5 (1-42)||(26350434-26350475)
chr5 (1-42)||(36563622-36563663)
chr5 (1-42)||(41989491-41989532)
[»] chr8 (59 HSPs)
chr8 (1-130)||(2890167-2890296)
chr8 (1-129)||(54617-54745)
chr8 (1-128)||(7785783-7785910)
chr8 (1-127)||(25601005-25601131)
chr8 (1-126)||(6552655-6552780)
chr8 (1-128)||(7805704-7805831)
chr8 (1-127)||(43199359-43199485)
chr8 (1-126)||(3304283-3304408)
chr8 (1-126)||(7012171-7012296)
chr8 (1-126)||(39571208-39571333)
chr8 (1-126)||(44498192-44498317)
chr8 (2-126)||(12343146-12343270)
chr8 (1-129)||(33289266-33289394)
chr8 (1-127)||(12763659-12763785)
chr8 (1-127)||(32211368-32211494)
chr8 (1-114)||(31654625-31654738)
chr8 (1-126)||(32114480-32114605)
chr8 (1-126)||(15888357-15888482)
chr8 (11-112)||(13578871-13578972)
chr8 (3-128)||(24691986-24692110)
chr8 (1-114)||(8587182-8587295)
chr8 (1-123)||(28463614-28463736)
chr8 (5-74)||(27422242-27422311)
chr8 (64-128)||(4245649-4245713)
chr8 (11-117)||(17006920-17007026)
chr8 (11-117)||(17570221-17570327)
chr8 (1-50)||(28463616-28463665)
chr8 (3-129)||(33057591-33057717)
chr8 (1-50)||(8587175-8587224)
chr8 (4-52)||(15688038-15688086)
chr8 (1-52)||(17006916-17006967)
chr8 (1-52)||(17570280-17570331)
chr8 (12-63)||(35564706-35564757)
chr8 (1-42)||(54696-54737)
chr8 (1-42)||(2890246-2890287)
chr8 (1-42)||(3304362-3304403)
chr8 (1-42)||(4245665-4245706)
chr8 (1-42)||(6552660-6552701)
chr8 (1-42)||(7785862-7785903)
chr8 (1-42)||(7805783-7805824)
chr8 (1-42)||(12343224-12343265)
chr8 (1-42)||(15888436-15888477)
chr8 (76-129)||(27422270-27422323)
chr8 (1-42)||(31654618-31654659)
chr8 (1-42)||(32114559-32114600)
chr8 (1-42)||(43199438-43199479)
chr8 (1-42)||(44498271-44498312)
chr8 (3-91)||(13246801-13246889)
chr8 (1-49)||(30171487-30171535)
chr8 (12-115)||(24202989-24203092)
chr8 (1-40)||(32211449-32211488)
chr8 (11-126)||(41450893-41451008)
chr8 (1-42)||(7012176-7012217)
chr8 (1-42)||(12763738-12763779)
chr8 (1-42)||(25601084-25601125)
chr8 (1-42)||(39571287-39571328)
chr8 (93-129)||(6899416-6899452)
chr8 (69-117)||(13246803-13246851)
chr8 (8-52)||(24692052-24692096)
[»] chr3 (69 HSPs)
chr3 (3-128)||(8817393-8817518)
chr3 (1-128)||(9111499-9111626)
chr3 (1-131)||(10297974-10298104)
chr3 (1-127)||(19557057-19557183)
chr3 (3-129)||(22721928-22722054)
chr3 (1-127)||(49823386-49823512)
chr3 (1-129)||(4238591-4238719)
chr3 (1-129)||(34080035-34080163)
chr3 (1-128)||(44785401-44785528)
chr3 (1-130)||(8437421-8437550)
chr3 (1-114)||(17653724-17653837)
chr3 (1-130)||(21295331-21295460)
chr3 (1-114)||(37508933-37509046)
chr3 (1-130)||(40691001-40691130)
chr3 (1-130)||(42507360-42507489)
chr3 (1-126)||(48340397-48340522)
chr3 (1-129)||(2787837-2787965)
chr3 (1-129)||(38964389-38964517)
chr3 (1-126)||(51406673-51406798)
chr3 (1-127)||(46208029-46208155)
chr3 (6-129)||(42170356-42170479)
chr3 (2-127)||(36095686-36095811)
chr3 (1-110)||(6013341-6013450)
chr3 (1-126)||(35513473-35513598)
chr3 (8-117)||(33942944-33943053)
chr3 (1-127)||(34988074-34988200)
chr3 (26-119)||(29285790-29285881)
chr3 (41-121)||(43323065-43323145)
chr3 (1-128)||(9213514-9213641)
chr3 (1-51)||(9027147-9027197)
chr3 (1-52)||(2131746-2131797)
chr3 (1-42)||(4238599-4238640)
chr3 (1-42)||(10297984-10298025)
chr3 (1-42)||(17653717-17653758)
chr3 (1-42)||(19557136-19557177)
chr3 (1-42)||(21295410-21295451)
chr3 (1-42)||(22721936-22721977)
chr3 (3-112)||(26019487-26019595)
chr3 (1-42)||(34080114-34080155)
chr3 (1-42)||(37508926-37508967)
chr3 (1-42)||(44785480-44785521)
chr3 (1-42)||(46208035-46208076)
chr3 (1-42)||(49823465-49823506)
chr3 (2-42)||(2787916-2787956)
chr3 (1-61)||(5323272-5323332)
chr3 (1-52)||(9213521-9213572)
chr3 (287-358)||(20528961-20529032)
chr3 (5-52)||(34988084-34988131)
chr3 (8-50)||(43323072-43323114)
chr3 (1-55)||(45652074-45652128)
chr3 (94-128)||(54537440-54537474)
chr3 (3-52)||(8092595-8092644)
chr3 (1-42)||(8437430-8437471)
chr3 (5-42)||(8817470-8817507)
chr3 (5-42)||(9111578-9111615)
chr3 (15-52)||(14848276-14848313)
chr3 (5-42)||(35513482-35513519)
chr3 (1-42)||(36095764-36095805)
chr3 (1-42)||(38964397-38964438)
chr3 (1-42)||(42170430-42170471)
chr3 (1-42)||(42507439-42507480)
chr3 (1-42)||(48340402-48340443)
chr3 (1-42)||(51406678-51406719)
chr3 (30-114)||(8092600-8092684)
chr3 (43-87)||(8951943-8951987)
chr3 (80-128)||(17653796-17653844)
chr3 (2-50)||(33128212-33128260)
chr3 (2-42)||(40691080-40691120)
chr3 (83-115)||(45093581-45093613)
[»] chr7 (44 HSPs)
chr7 (1-129)||(1738452-1738580)
chr7 (1-129)||(7240746-7240874)
chr7 (1-128)||(46840858-46840985)
chr7 (1-129)||(9268753-9268881)
chr7 (1-127)||(7482224-7482350)
chr7 (1-127)||(38063918-38064044)
chr7 (1-126)||(23314144-23314269)
chr7 (1-126)||(31319404-31319529)
chr7 (1-129)||(22285696-22285824)
chr7 (5-128)||(1565738-1565861)
chr7 (1-127)||(4790247-4790373)
chr7 (1-126)||(36583395-36583520)
chr7 (1-126)||(38441460-38441585)
chr7 (1-127)||(28536756-28536882)
chr7 (1-114)||(94323-94436)
chr7 (6-114)||(36016206-36016314)
chr7 (2-110)||(33418392-33418500)
chr7 (5-114)||(9575421-9575530)
chr7 (3-114)||(40840126-40840237)
chr7 (3-111)||(7269412-7269520)
chr7 (1-127)||(7661075-7661201)
chr7 (3-54)||(29993251-29993302)
chr7 (1-42)||(1565813-1565854)
chr7 (1-42)||(1738531-1738572)
chr7 (1-42)||(7240754-7240795)
chr7 (1-42)||(7482230-7482271)
chr7 (1-42)||(22285704-22285745)
chr7 (1-42)||(23314223-23314264)
chr7 (1-42)||(28536835-28536876)
chr7 (1-42)||(31319483-31319524)
chr7 (1-42)||(36016280-36016321)
chr7 (1-42)||(36583400-36583441)
chr7 (1-42)||(38063997-38064038)
chr7 (1-42)||(46840865-46840906)
chr7 (2-42)||(94402-94442)
chr7 (1-53)||(7269478-7269530)
chr7 (3-51)||(46877665-46877713)
chr7 (251-358)||(1506907-1507014)
chr7 (6-61)||(2853681-2853736)
chr7 (11-65)||(36033241-36033295)
chr7 (1-42)||(9268761-9268802)
chr7 (80-129)||(36583479-36583528)
chr7 (1-42)||(38441465-38441506)
chr7 (8-61)||(39019840-39019893)
[»] chr4 (63 HSPs)
chr4 (1-129)||(47833608-47833736)
chr4 (1-129)||(3372118-3372246)
chr4 (1-129)||(48336260-48336388)
chr4 (1-129)||(51894587-51894715)
chr4 (1-127)||(47838622-47838748)
chr4 (1-130)||(3992972-3993101)
chr4 (1-126)||(6121898-6122023)
chr4 (1-126)||(20538691-20538816)
chr4 (1-126)||(53337370-53337495)
chr4 (1-129)||(42797729-42797857)
chr4 (1-127)||(33621795-33621921)
chr4 (1-126)||(24704370-24704495)
chr4 (1-126)||(46797725-46797850)
chr4 (2-126)||(5986876-5987000)
chr4 (1-128)||(41469771-41469898)
chr4 (1-128)||(43900547-43900674)
chr4 (1-127)||(3904688-3904814)
chr4 (1-127)||(7579309-7579435)
chr4 (1-114)||(3422073-3422185)
chr4 (5-114)||(52756687-52756796)
chr4 (1-127)||(40913194-40913320)
chr4 (15-127)||(33551200-33551312)
chr4 (3-116)||(41615683-41615796)
chr4 (15-127)||(26231576-26231688)
chr4 (1-127)||(29845644-29845764)
chr4 (9-111)||(50430431-50430533)
chr4 (11-112)||(17344227-17344328)
chr4 (27-114)||(25855095-25855182)
chr4 (1-63)||(4780358-4780420)
chr4 (1-67)||(45478151-45478217)
chr4 (2-50)||(17236864-17236912)
chr4 (1-42)||(3372126-3372167)
chr4 (1-42)||(3992981-3993022)
chr4 (54-114)||(17236845-17236906)
chr4 (1-42)||(20538770-20538811)
chr4 (1-42)||(24704375-24704416)
chr4 (30-111)||(31013036-31013117)
chr4 (1-42)||(33551206-33551247)
chr4 (1-42)||(43900554-43900595)
chr4 (1-114)||(44900092-44900205)
chr4 (1-42)||(47833616-47833657)
chr4 (1-42)||(48336268-48336309)
chr4 (1-42)||(53337375-53337416)
chr4 (8-60)||(1716365-1716417)
chr4 (1-41)||(26231582-26231622)
chr4 (1-52)||(1716306-1716357)
chr4 (1-52)||(44900085-44900136)
chr4 (36-114)||(6924724-6924801)
chr4 (82-112)||(32822295-32822325)
chr4 (5-111)||(43095230-43095336)
chr4 (1-42)||(3904767-3904808)
chr4 (1-42)||(6121977-6122018)
chr4 (1-42)||(7579315-7579356)
chr4 (1-42)||(40913273-40913314)
chr4 (1-42)||(42797737-42797778)
chr4 (5-74)||(45725908-45725977)
chr4 (1-42)||(46797730-46797771)
chr4 (1-42)||(47838701-47838742)
chr4 (80-129)||(48336347-48336396)
chr4 (1-42)||(51894666-51894707)
chr4 (2-50)||(41594660-41594708)
chr4 (15-107)||(41594673-41594765)
chr4 (2-42)||(52756681-52756721)
[»] chr1 (52 HSPs)
chr1 (1-129)||(27159363-27159491)
chr1 (1-129)||(44668098-44668226)
chr1 (1-127)||(9981646-9981772)
chr1 (1-130)||(26471070-26471199)
chr1 (1-126)||(31842800-31842925)
chr1 (1-126)||(39401971-39402096)
chr1 (2-126)||(44955212-44955336)
chr1 (1-128)||(11795931-11796058)
chr1 (1-128)||(14984835-14984962)
chr1 (1-126)||(47216704-47216829)
chr1 (1-127)||(34042695-34042821)
chr1 (1-126)||(1050888-1051013)
chr1 (1-130)||(12483633-12483762)
chr1 (1-114)||(47777486-47777599)
chr1 (1-129)||(25694316-25694444)
chr1 (11-130)||(47588352-47588471)
chr1 (16-126)||(23278021-23278131)
chr1 (1-114)||(17556764-17556878)
chr1 (1-114)||(47969706-47969820)
chr1 (1-127)||(11897053-11897179)
chr1 (1-116)||(11989791-11989906)
chr1 (2-127)||(16448114-16448239)
chr1 (4-114)||(37552153-37552263)
chr1 (6-111)||(12213484-12213589)
chr1 (1-52)||(16448182-16448233)
chr1 (3-121)||(12043609-12043726)
chr1 (1-52)||(11897059-11897110)
chr1 (3-74)||(1598389-1598458)
chr1 (11-92)||(571542-571622)
chr1 (1-42)||(1050893-1050934)
chr1 (1-42)||(9981652-9981693)
chr1 (1-42)||(11795938-11795979)
chr1 (1-42)||(12483712-12483753)
chr1 (1-42)||(26471149-26471190)
chr1 (1-42)||(27159442-27159483)
chr1 (34-119)||(31748338-31748423)
chr1 (1-42)||(31842879-31842920)
chr1 (1-42)||(39402050-39402091)
chr1 (1-42)||(44668177-44668218)
chr1 (1-42)||(47216783-47216824)
chr1 (2-42)||(14984843-14984883)
chr1 (1-40)||(23278087-23278126)
chr1 (1-40)||(34042701-34042740)
chr1 (10-114)||(12047118-12047223)
chr1 (267-305)||(19016022-19016060)
chr1 (2-52)||(21537943-21537993)
chr1 (4-42)||(47777565-47777603)
chr1 (1-90)||(19391910-19391999)
chr1 (1-42)||(44955290-44955331)
chr1 (5-61)||(5392211-5392267)
chr1 (80-128)||(11897138-11897186)
chr1 (4-52)||(12062568-12062616)
[»] chr2 (53 HSPs)
chr2 (1-128)||(37990018-37990145)
chr2 (1-128)||(41478644-41478771)
chr2 (1-127)||(3055557-3055683)
chr2 (1-127)||(15896841-15896967)
chr2 (1-127)||(44398685-44398811)
chr2 (1-126)||(13197715-13197840)
chr2 (3-127)||(16243790-16243914)
chr2 (4-127)||(44397546-44397669)
chr2 (1-127)||(38917527-38917653)
chr2 (1-126)||(12337942-12338067)
chr2 (1-126)||(6648524-6648649)
chr2 (1-114)||(15372238-15372351)
chr2 (1-126)||(16044322-16044447)
chr2 (1-126)||(37666615-37666740)
chr2 (1-128)||(13344482-13344609)
chr2 (1-111)||(9047760-9047870)
chr2 (1-124)||(30099187-30099310)
chr2 (1-114)||(41492901-41493014)
chr2 (15-127)||(4683951-4684063)
chr2 (1-98)||(44804583-44804680)
chr2 (11-126)||(12170414-12170529)
chr2 (1-107)||(16734802-16734908)
chr2 (5-117)||(31150662-31150769)
chr2 (36-101)||(41453084-41453149)
chr2 (1-42)||(3055563-3055604)
chr2 (1-42)||(4684016-4684057)
chr2 (1-42)||(13197794-13197835)
chr2 (1-114)||(13724107-13724220)
chr2 (1-42)||(15896847-15896888)
chr2 (1-42)||(16044401-16044442)
chr2 (1-42)||(37666694-37666735)
chr2 (1-42)||(37990097-37990138)
chr2 (1-42)||(41478723-41478764)
chr2 (1-42)||(44397552-44397593)
chr2 (1-42)||(44398691-44398732)
chr2 (182-222)||(13538917-13538957)
chr2 (1-129)||(23227277-23227405)
chr2 (7-50)||(23227348-23227391)
chr2 (31-114)||(36688894-36688977)
chr2 (26-112)||(10069237-10069323)
chr2 (197-231)||(13538875-13538909)
chr2 (43-129)||(14740464-14740550)
chr2 (10-52)||(20900678-20900720)
chr2 (6-52)||(36688892-36688938)
chr2 (80-130)||(41492892-41492942)
chr2 (1-42)||(15372231-15372272)
chr2 (1-37)||(6648608-6648644)
chr2 (11-63)||(11582647-11582699)
chr2 (11-55)||(15243990-15244034)
chr2 (7-63)||(15271117-15271173)
chr2 (2-42)||(16243867-16243907)
chr2 (2-50)||(31150659-31150707)
chr2 (7-63)||(44425028-44425084)
[»] scaffold0204 (3 HSPs)
scaffold0204 (1-129)||(23782-23910)
scaffold0204 (1-42)||(23790-23831)
scaffold0204 (80-129)||(23869-23918)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-128)||(12858-12985)
scaffold0482 (1-42)||(12865-12906)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-128)||(49503-49630)
scaffold0009 (1-42)||(49510-49551)
[»] scaffold0464 (3 HSPs)
scaffold0464 (1-126)||(6136-6261)
scaffold0464 (1-42)||(6215-6256)
scaffold0464 (80-129)||(6128-6177)
[»] scaffold1707 (2 HSPs)
scaffold1707 (8-127)||(1334-1453)
scaffold1707 (3-42)||(1342-1381)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-126)||(231308-231433)
[»] scaffold0415 (1 HSPs)
scaffold0415 (1-127)||(13736-13857)
[»] scaffold0650 (1 HSPs)
scaffold0650 (12-92)||(1-81)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-97)||(312747-312843)


Alignment Details
Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 13853598 - 13853726
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  13853598 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13853697  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| ||||||||||||||    
T  13853698 tcttataaataggaccgaaggtagtatta 13853726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 8382974 - 8383102
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  8382974 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 8383073  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  8383074 tcttataaataggaccggaggtagtatta 8383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 2830460 - 2830334
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  2830460 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 2830361  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  2830360 tcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 11572150 - 11572276
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  11572150 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 11572249  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  11572250 tcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 35031006 - 35031132
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35031006 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttt 35031105  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  35031106 tcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6330240 - 6330115
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  6330240 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 6330141  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  6330140 tcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26602448 - 26602323
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  26602448 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 26602349  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  26602348 tcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8099655 - 8099529
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||     
T  8099655 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttc 8099556  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  8099555 tcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 33052801 - 33052926
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  33052801 tccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 33052900  T
Q  103 ttataaataggatcgaaggtagtatt 128  Q
    |||||||||||| || ||||||||||    
T  33052901 ttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 6068691 - 6068563
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||    
T  6068691 cctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttt 6068592  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  6068591 tcttataaataggaccggaggtagtatta 6068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9644821 - 9644696
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||     
T  9644821 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttc 9644722  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  9644721 tcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9650838 - 9650713
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||     
T  9650838 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttc 9650739  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  9650738 tcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 6143677 - 6143553
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||    
T  6143677 tccggttctatttataagagaattttgggacaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctc 6143578  T
Q  103 ttataaataggatcgaaggtagtat 127  Q
    ||||||||||||||| |||||||||    
T  6143577 ttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 8417802 - 8417908
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  8417802 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctctt 8417901  T
Q  105 ataaata 111  Q
    |||||||    
T  8417902 ataaata 8417908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 28747145 - 28747248
Alignment:
Q  7 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  28747145 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttat 28747244  T
Q  107 aaat 110  Q
    ||||    
T  28747245 aaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 17992109 - 17992018
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaa 96  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  17992109 cggtcctatttataagagaattttgggtcaacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 22896584 - 22896514
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 74  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  22896584 ccggtcctatttataagagaattttttgtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 22896514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  34 aacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaaggtagta 126  Q
    |||||||||||||||||||||||||||||||| | |||||| ||||| |||||||||||||||||| |||||||||||| | || ||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3788162 - 3788032
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttg-ttgacctaaattt 99  Q
    ||||||||| ||||||||||| || ||| ||||||||||||||||||||| ||||||| ||||||||||| ||  |   | ||||| |||||| || |||    
T  3788162 cctccggtcttatttataagataaatttaggtcaacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgacccaacttt 3788063  T
Q  100 ttcttataaataggatcgaaggtagtattaa 130  Q
     ||||||||||||||||| ||| ||||||||    
T  3788062 ctcttataaataggatcgtagggagtattaa 3788032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 6068974 - 6069058
Alignment:
Q  30 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    |||||||||||| ||| ||||| ||||||||||| || ||||||| ||| |||||||||||||||||| | | ||||||||||||    
T  6068974 ggtcaacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaatagga 6069058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 7596989 - 7597048
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagt 67  Q
    ||||||||||| ||||| |||| ||||| |||||||||||||| ||||||||||||||||    
T  7596989 tcctatttataggagaaatttgagtcaataaaagttgatgtatttagttaaaaattcagt 7597048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14936462 - 14936575
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||| |||||||| || |||| |  ||| |||||||||||| |||||||||||||||| ||||   |||||||| ||  ||| ||||||||| |||| |     
T  14936462 cctctggtcctatatagaagaaacatttaggtcaacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatc 14936561  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  14936562 tcttataaatagga 14936575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 6549997 - 6549902
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttata 107  Q
    |||||||||||||  ||| ||| ||||||||||||||||||||||  ||| ||   | |||||| ||| |||||||||||||||||||| |||||||    
T  6549997 tatttataagagatattttggttaacaaaagttgatgtatctagtccaaattttcat-caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 8186489 - 8186441
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  8186489 ccggtcctatttataaaagaaatttggatcaacaaaagttgatgtatct 8186441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 3421588 - 3421707
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    ||||||||||| || |||| |||||||||||||||| |||||  ||||||| ||| || | ||||||  ||||||||||||  || |||  ||||||| |    
T  3421588 tatttataagaaaaatttgagtcaacaaaagttgatatatcttattaaaaaatcaatctagatatatcaacttttgttgactcaactttcacttataagt 3421687  T
Q  111 aggatcgaaggtagtattaa 130  Q
    |||| | |||| ||||||||    
T  3421688 aggacctaagggagtattaa 3421707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2830340 - 2830381
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  2830340 cctccggtcctatttataagagaaatttaggtcaacaaaagt 2830381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6330120 - 6330161
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  6330120 cctccggtcctatttataagagaaatttaggtcaacaaaagt 6330161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8099535 - 8099576
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  8099535 cctccggtcctatttataagagaaatttaggtcaacaaaagt 8099576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8383094 - 8383053
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  8383094 cctccggtcctatttataagagaaatttaggtcaacaaaagt 8383053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11572270 - 11572229
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  11572270 cctccggtcctatttataagagaaatttaggtcaacaaaagt 11572229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14936582 - 14936533
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    |||| ||||||||||||||||||  ||||||||||||| |||||||||||    
T  14936582 cctctggtcctatttataagagatatttgggtcaacaatagttgatgtat 14936533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26602328 - 26602369
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  26602328 cctccggtcctatttataagagaaatttaggtcaacaaaagt 26602369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33052919 - 33052878
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  33052919 cctccggtcctatttataagagaaatttaggtcaacaaaagt 33052878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 31849586 - 31849634
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    |||||||| |||||||||||||  | |||||||||||||||||||||||    
T  31849586 ctccggtcatatttataagagacatatgggtcaacaaaagttgatgtat 31849634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 33393165 - 33393213
Alignment:
Q  15 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    |||||||||| |||| ||||| |||||||||||||||||||| ||||||    
T  33393165 tataagagaaatttgagtcaataaaagttgatgtatctagtttaaaatt 33393213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 5685459 - 5685353
Alignment:
Q  6 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctta 105  Q
    |||| ||||||||||| |  ||||||||| |||||  ||||||| || ||||| ||||  ||||||||| ||  ||||||||||||| |||| ||| |||    
T  5685459 ggtcttatttataagaaacatttgggtcagcaaaatatgatgtaacttgttaataatttggtccaaatacatcaacttttgttgacccaaatgtttttta 5685360  T
Q  106 taaatag 112  Q
    | |||||    
T  5685359 ttaatag 5685353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6143559 - 6143600
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  6143559 cctccgatcctatttataagagaaatttaggtcaacaaaagt 6143600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 13853714 - 13853677
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  13853714 cggtcctatttataagagaaatttaggtcaacaaaagt 13853677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35031126 - 35031085
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  35031126 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 35031085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9644701 - 9644737
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaaca 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  9644701 cctccggtcctatttataagagaaatttaggtcaaca 9644737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9650718 - 9650754
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaaca 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  9650718 cctccggtcctatttataagagaaatttaggtcaaca 9650754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22896476 - 22896512
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaaca 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  22896476 cctccggtcctatttataagagaagtttaggtcaaca 22896512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 8e-59; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 36563543 - 36563670
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  36563543 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 36563642  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    ||||||||||||||||| ||||||||||    
T  36563643 tcttataaataggatcggaggtagtatt 36563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 9395475 - 9395350
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  9395475 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9395376  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  9395375 tcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 11795293 - 11795168
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  11795293 cctccagtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 11795194  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    ||||||||||||||||| ||||||||    
T  11795193 tcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37148960 - 37149088
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  37148960 cctccggtcctatttataatagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 37149059  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  37149060 tcttataaataggaccggaggtagtatta 37149088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23360067 - 23359941
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  23360067 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 23359968  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| |  |||||||||    
T  23359967 tcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 41989412 - 41989538
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  41989412 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41989511  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    ||||| |||||||| || |||||||||    
T  41989512 tcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13103149 - 13103023
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  13103149 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13103050  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || ||| |||||    
T  13103049 tcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 17025749 - 17025622
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||| |||||||||||     
T  17025749 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttc 17025650  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  17025649 tcttataaataggaccggaggtagtatt 17025622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 13033176 - 13033050
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  13033176 cctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13033077  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || ||| |||||    
T  13033076 tcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 20848198 - 20848070
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  20848198 cctccggtcctatttataagagaattttggg-caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttc 20848100  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  20848099 tcttataaataggaccggaggtagtattaa 20848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 26350355 - 26350480
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  26350355 cctccggtcctatttataaaagaattttgaatcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 26350454  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    ||||||||||||||||| ||| ||||    
T  26350455 tcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 37642079 - 37641950
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcac-ttttgttgacctaaattt 99  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||| |||||||||||||    
T  37642079 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaattt 37641980  T
Q  100 ttcttataaataggatcgaaggtagtatta 129  Q
     |||||||||||||| || |||||||||||    
T  37641979 ctcttataaataggaccggaggtagtatta 37641950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 4444085 - 4443958
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||     
T  4444085 cctccggtcttatttataagagaattttagatcaacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttc 4443986  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| |||||| ||||||    
T  4443985 tcttataaataggaccgaaggaagtatt 4443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 583099 - 582986
Alignment:
Q  16 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggat 115  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||     
T  583099 ataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggac 583000  T
Q  116 cgaaggtagtatta 129  Q
    || |||||||||||    
T  582999 cggaggtagtatta 582986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21576071 - 21575973
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattt 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  21576071 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaattt 21575973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 6126949 - 6126845
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| ||||||||     
T  6126949 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttc 6126850  T
Q  101 tctta 105  Q
    |||||    
T  6126849 tctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 38361743 - 38361822
Alignment:
Q  48 tatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaaggtagtat 127  Q
    |||||| |||||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||| ||| |||||    
T  38361743 tatctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 13539909 - 13539981
Alignment:
Q  38 aaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    ||||||||||||||||||||||||||||||| |||| |||    |||||||||||||||||| ||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaatttat----ttttgttgacctaaatttctcttataaatagga 13539981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 40138806 - 40138916
Alignment:
Q  12 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt-tcttataaat 110  Q
    |||||||| ||||  |||||| || |||||||||||||| |  ||||||||||||| |||||||||| | ||||||||||  || |||| ||||||||||    
T  40138806 atttataaaagaaaattgggttaataaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttgactcaacttttctcttataaat 40138905  T
Q  111 aggatcgaagg 121  Q
    | |||||||||    
T  40138906 atgatcgaagg 40138916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 2366352 - 2366416
Alignment:
Q  10 ctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 74  Q
    ||||||||||||||| ||||||||||||| |||| |||||| | ||||||| |||||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttggttaaaatttcagtccaaata 2366416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 966273 - 966206
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtc 68  Q
    ||||| |||||||||||||||||| ||||| ||||||||| |  |||||||| |||||||||||||||    
T  966273 cctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtatctggttaaaaattcagtc 966206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 9006894 - 9006949
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    |||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||    
T  9006894 tcctatttataacagacttttaggtcaacaaaagttgatgtatctagttcaaaatt 9006949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 3549553 - 3549663
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    ||||||||||||||||||||||| |||   | |||||||||||||||||   |||||||||| || ||| ||| ||| | ||||||||||  |||| | |    
T  3549553 ctccggtcctatttataagagaaatttatattaacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatct 3549652  T
Q  102 cttataaatag 112  Q
    |||||||||||    
T  3549653 cttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 2629561 - 2629657
Alignment:
Q  13 tttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaa 109  Q
    ||||||||| |  |||| ||||| |||| ||||||||| |||||||||| | ||  || ||| ||| |||||||||||||||||| |||||||||||    
T  2629561 tttataagaaacatttgagtcaataaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaa 2629657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 36595782 - 36595846
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtc 68  Q
    |||||| ||||||||||||||  || ||||||||||| |||||||||||  ||||||||||||||    
T  36595782 ccggtcttatttataagagaaagttaggtcaacaaaaattgatgtatctgattaaaaattcagtc 36595846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9395355 - 9395396
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  9395355 cctccggtcctatttataagagaaatttaggtcaacaaaagt 9395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13033056 - 13033097
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  13033056 cctccggtcctatttataagagaaatttaggtcaacaaaagt 13033097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 13103029 - 13103070
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  13103029 cctccggtcctatttataagagaaatttaggtcaacaaaagt 13103070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37149080 - 37149039
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  37149080 cctccggtcctatttataagagaaatttaggtcaacaaaagt 37149039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 39290891 - 39290807
Alignment:
Q  9 cctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacct 93  Q
    ||||||||||||||||  | |  |||||||||||| ||||||||| ||||||||| | |||||||| ||  | ||||||||||||    
T  39290891 cctatttataagagaaagtcgaatcaacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacct 39290807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 35904518 - 35904451
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 74  Q
    ||||| ||||||| ||||||  ||  ||||||||||||  |||||| |||||||||||||||||||||||    
T  35904518 cggtcttatttattagagaaaatttagtcaacaaaagt--atgtatttagttaaaaattcagtccaaata 35904451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 582994 - 583035
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||| ||||    
T  582994 cctccggtcctatttataagagaaatttaggtcaacataagt 583035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 4443969 - 4444006
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  4443969 cggtcctatttataagagaaatttaggtcaacaaaagt 4444006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11795173 - 11795214
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  11795173 cctccgatcctatttataagagaaatttaggtcaacaaaagt 11795214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 13033135 - 13033184
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||| ||| || ||||||||||||||||| ||| |||||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtatta 13033184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 13539986 - 13539949
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaa 40  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  13539986 tccggtcctatttataagagaaatttaggtcaacaaaa 13539949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17025629 - 17025670
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||| ||||||||    
T  17025629 cctccggtcctatttataagagaaatttaggtccacaaaagt 17025670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20848079 - 20848120
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  20848079 cctccggtcctatttataagagaaatttaggtcaataaaagt 20848120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23359947 - 23359988
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||| ||||||||||||||||||| ||| |||||||||||||    
T  23359947 cctctggtcctatttataagagaaatttaggtcaacaaaagt 23359988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26350475 - 26350434
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  26350475 cctccgatcctatttataagagaaatttaggtcaacaaaagt 26350434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36563663 - 36563622
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  36563663 cctccgatcctatttataagagaaatttaggtcaacaaaagt 36563622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41989532 - 41989491
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||| |||||||| ||| |||||||||||||    
T  41989532 cctccggtcctatttgtaagagaaatttaggtcaacaaaagt 41989491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 1e-57; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2890167 - 2890296
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  2890167 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 2890266  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  2890267 tcttataaataggaccggaggtagtattaa 2890296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 54617 - 54745
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  54617 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 54716  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  54717 tcttataaataggaccggaggtagtatta 54745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7785783 - 7785910
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  7785783 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 7785882  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  7785883 tcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25601005 - 25601131
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  25601005 cctccggtcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 25601104  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    ||||||||||||||||| |||||||||    
T  25601105 tcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6552780 - 6552655
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  6552780 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 6552681  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  6552680 tcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 7805704 - 7805831
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  7805704 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 7805803  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  7805804 tcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 43199359 - 43199485
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  43199359 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 43199458  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  43199459 tcttataaataggaccggaggtagtat 43199485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3304283 - 3304408
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3304283 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3304382  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  3304383 tcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 7012296 - 7012171
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  7012296 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttc 7012197  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  7012196 tcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 39571208 - 39571333
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||     
T  39571208 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 39571307  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  39571308 tcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 44498192 - 44498317
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  44498192 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44498291  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  44498292 tcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 12343146 - 12343270
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  12343146 ctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 12343245  T
Q  102 cttataaataggatcgaaggtagta 126  Q
    ||||||||||||| || ||||||||    
T  12343246 cttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 33289266 - 33289394
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||     
T  33289266 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttc 33289365  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  33289366 tcttataaataggaccggaggtagtatta 33289394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12763659 - 12763785
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  12763659 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 12763758  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    ||||||||||| || || |||||||||    
T  12763759 tcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32211368 - 32211494
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||     
T  32211368 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttc 32211467  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  32211468 tcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31654738 - 31654625
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  31654738 cctccggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 31654639  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  31654638 tcttataaatagga 31654625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 32114480 - 32114605
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  32114480 cctccggtcctatttataagaaaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 32114579  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  32114580 tcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 15888357 - 15888482
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||     
T  15888357 cctccagttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttc 15888456  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  15888457 tcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 13578972 - 13578871
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||    
T  13578972 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaat 13578873  T
Q  111 ag 112  Q
    ||    
T  13578872 ag 13578871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 24691986 - 24692110
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||| ||||| ||||||| |||||| || ||| ||  |||||||||||||||| ||||||    
T  24691986 tccggtcctatttttaaaagaaatttgggtcaacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttttc 24692084  T
Q  103 ttataaataggatcgaaggtagtatt 128  Q
    ||||||||||||||||||| ||||||    
T  24692085 ttataaataggatcgaagggagtatt 24692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8587295 - 8587182
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||| ||||||||||||||  ||| ||||| ||||||||||||||||||||||||||| |||| ||||| ||  ||||||||||||| || |||     
T  8587295 cctccggtcttatttataagagaaacttgagtcaataaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttc 8587196  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  8587195 tcttataaatagga 8587182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 28463736 - 28463614
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||| ||||||||||   ||||| |||||||| | ||||||||| ||||| ||| ||||||||||||||||| ||  ||||||||||||| || |||     
T  28463736 cctccgatcctatttattgcagaatattgggtcaccgaaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttc 28463637  T
Q  101 tcttataaataggatcgaaggta 123  Q
    |||||||||||||| || |||||    
T  28463636 tcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 27422311 - 27422242
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 74  Q
    |||||||||||||||||||| ||||||||||||||| |  |||||||| |||||||||||||||||||||    
T  27422311 cggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccaaata 27422242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 4245649 - 4245713
Alignment:
Q  64 cagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaaggtagtatt 128  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 17007026 - 17006920
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    |||||||||||||| |||  ||||| ||||||||||||||||  |||| ||||||||||| ||  ||  ||||||||||||| || ||| ||||||||||    
T  17007026 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17006927  T
Q  111 aggatcg 117  Q
    |||||||    
T  17006926 aggatcg 17006920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 17570221 - 17570327
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    |||||||||||||| |||  ||||| ||||||||||||||||  |||| ||||||||||| ||  ||  ||||||||||||| || ||| ||||||||||    
T  17570221 tatttataagagaaattttagtcaataaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaat 17570320  T
Q  111 aggatcg 117  Q
    |||||||    
T  17570321 aggatcg 17570327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 28463616 - 28463665
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28463616 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtat 28463665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 33057717 - 33057591
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    ||||||| ||||||||||||||  || ||||||||||| ||||||||||| ||||||| |||| |||  ||| |   | ||||||||| | || ||| ||    
T  33057717 tccggtcttatttataagagaaagtttggtcaacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtc 33057618  T
Q  103 ttataaataggatcgaaggtagtatta 129  Q
    |||||||||||| || ||| |||||||    
T  33057617 ttataaataggaccggagggagtatta 33057591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8587175 - 8587224
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||    
T  8587175 cctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtat 8587224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 15688038 - 15688086
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||| ||||||||||||  ||||||||||||||||||||||||||    
T  15688038 ccggtcctgtttataagagaaagttgggtcaacaaaagttgatgtatct 15688086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17006916 - 17006967
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| ||||    
T  17006916 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatct 17006967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 17570331 - 17570280
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||| ||||    
T  17570331 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatct 17570280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 35564706 - 35564757
Alignment:
Q  12 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    |||||||||||| ||||| |||||||||| ||||||||||||||| ||||||    
T  35564706 atttataagagatttttgagtcaacaaaatttgatgtatctagttcaaaatt 35564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 54737 - 54696
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  54737 cctccggtcctatttataagagaaatttaggtcaacaaaagt 54696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 2890287 - 2890246
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  2890287 cctccggtcctatttataagagaaatttaggtcaacaaaagt 2890246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3304403 - 3304362
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3304403 cctccggtcctatttataagagaaatttaggtcaacaaaagt 3304362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4245706 - 4245665
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  4245706 cctccggtcctatttataagagaaatttaggtcaacaaaagt 4245665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 6552660 - 6552701
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  6552660 cctccggtcctatttataagagaaatttaggtcaacaaaagt 6552701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7785903 - 7785862
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  7785903 cctccggtcctatttataagagaaatttaggtcaacaaaagt 7785862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7805824 - 7805783
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  7805824 cctccggtcctatttataagagaaatttaggtcaacaaaagt 7805783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12343265 - 12343224
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  12343265 cctccggtcctatttataagagaaatttaggtcaacaaaagt 12343224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 15888477 - 15888436
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  15888477 cctccggtcctatttataagagaaatttaggtcaacaaaagt 15888436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 27422270 - 27422323
Alignment:
Q  76 attcacttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    ||||| ||||||||||| |||||| |||||||||||||| |||||| |||||||    
T  27422270 attcatttttgttgacccaaatttctcttataaataggaccgaagggagtatta 27422323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31654618 - 31654659
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  31654618 cctccggtcctatttataagagaaatttaggtcaacaaaagt 31654659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32114600 - 32114559
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  32114600 cctccggtcctatttataagagaaatttaggtcaacaaaagt 32114559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 43199479 - 43199438
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  43199479 cctccggtcctatttataagagaaatttaggtcaacaaaagt 43199438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44498312 - 44498271
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  44498312 cctccggtcctatttataagagaaatttaggtcaacaaaagt 44498271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 13246801 - 13246889
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgac 91  Q
    |||| ||||||||||||||||| ||||| ||||||||| |  |||||| |   ||||||||||||||| ||| ||  ||||||||||||    
T  13246801 tccgatcctatttataagagaaatttggatcaacaaaaatgaatgtatttgactaaaaattcagtccagatacatgaacttttgttgac 13246889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30171487 - 30171535
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgta 49  Q
    |||||| ||||||||| |||||||||||| ||||||||||||| |||||    
T  30171487 cctccgatcctatttacaagagaattttgagtcaacaaaagttaatgta 30171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 24202989 - 24203092
Alignment:
Q  12 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaata 111  Q
    |||||||||| |  ||| |||||| ||  |||||||||| | ||| |||||| |   ||||||||| ||||||| ||||| ||||||| |||||||||||    
T  24202989 atttataagaaatattttggtcaataatggttgatgtatttggttcaaaatttaaatcaaatatatccacttttattgacataaatttctcttataaata 24203088  T
Q  112 ggat 115  Q
    ||||    
T  24203089 ggat 24203092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 32211488 - 32211449
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  32211488 cctccggtcctatttataagagaaatttaggtcaacaaaa 32211449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 41450893 - 41451008
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    ||||||||||||||  ||  || ||||||||||||||||  | ||| |||||| ||  || ||||||| |||| |||||| | ||  |||||||||||||    
T  41450893 tatttataagagaaaattaagtaaacaaaagttgatgtacgtggtttaaaatttaggtcagatatattaacttatgttgaacaaacattttcttataaat 41450992  T
Q  111 aggatcgaaggtagta 126  Q
    ||||| ||||| ||||    
T  41450993 aggattgaagggagta 41451008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7012176 - 7012217
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  7012176 cctccggtcctatttataagagaaatttagatcaacaaaagt 7012217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12763779 - 12763738
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  12763779 cctccggtcttatttataagagaaatttaggtcaacaaaagt 12763738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25601125 - 25601084
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  25601125 cctccgatcctatttataagagaaatttaggtcaacaaaagt 25601084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39571328 - 39571287
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  39571328 cctccggtcctatttataagagaaatttagatcaacaaaagt 39571287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 6899452 - 6899416
Alignment:
Q  93 taaatttttcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||||||||||| || |||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagtatta 6899416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 13246851 - 13246803
Alignment:
Q  69 caaatatattcacttttgttgacctaaatttttcttataaataggatcg 117  Q
    |||||| ||||| ||||||||| | |||||| |||||||||||||||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcg 13246803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 24692096 - 24692052
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||||||||| ||  || |||||||||||||||||||||||    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatct 24692052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 1e-57; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 8817393 - 8817518
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  8817393 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 8817492  T
Q  103 ttataaataggatcgaaggtagtatt 128  Q
    |||||||||||| |||||||||||||    
T  8817493 ttataaataggaccgaaggtagtatt 8817518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 9111499 - 9111626
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  9111499 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 9111598  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| |||||||||||||    
T  9111599 tcttataaataggaccgaaggtagtatt 9111626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 10298104 - 10297974
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  10298104 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 10298005  T
Q  101 tcttataaataggatcgaaggtagtattaac 131  Q
    |||||||||||||| || |||||||| ||||    
T  10298004 tcttataaataggaccggaggtagtactaac 10297974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19557057 - 19557183
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  19557057 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 19557156  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  19557157 tcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 3 - 129
Target Start/End: Complemental strand, 22722054 - 22721928
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  22722054 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 22721955  T
Q  103 ttataaataggatcgaaggtagtatta 129  Q
    |||||||||||| || |||||||||||    
T  22721954 ttataaataggaccggaggtagtatta 22721928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 49823386 - 49823512
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  49823386 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 49823485  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  49823486 tcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 4238719 - 4238591
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  4238719 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 4238620  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  4238619 tcttataaataggaccggaggtagtatta 4238591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 34080035 - 34080163
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||     
T  34080035 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 34080134  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  34080135 tcttataaataggaccggaggtagtatta 34080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 44785401 - 44785528
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  44785401 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44785500  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  44785501 tcttataaataggaccggaggtagtatt 44785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 8437550 - 8437421
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  8437550 cctccggtcctatttataagagaattttgagtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttc 8437451  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  8437450 tcttataaataggaccggaggtagtattaa 8437421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17653837 - 17653724
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  17653837 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 17653738  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  17653737 tcttataaatagga 17653724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 21295331 - 21295460
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  21295331 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttc 21295430  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  21295431 tcttataaataggaccggaggtagtattaa 21295460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37509046 - 37508933
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  37509046 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 37508947  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  37508946 tcttataaatagga 37508933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40691001 - 40691130
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||     
T  40691001 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttc 40691100  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || || |||||||||    
T  40691101 tcttataaataggaccggagttagtattaa 40691130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 42507360 - 42507489
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||     
T  42507360 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttc 42507459  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    | |||||||||||| || ||||||||||||    
T  42507460 tattataaataggaccggaggtagtattaa 42507489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 48340522 - 48340397
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  48340522 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 48340423  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||| ||||||||| || ||||||||    
T  48340422 tcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 2787837 - 2787965
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  2787837 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 2787936  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || || ||||||||    
T  2787937 tcttataaataggaccggagatagtatta 2787965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 38964517 - 38964389
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||     
T  38964517 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 38964418  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  38964417 tcttataaataggaccggaggtagtatta 38964389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 51406798 - 51406673
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  51406798 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 51406699  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    ||||||||||| || || ||||||||    
T  51406698 tcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 46208155 - 46208029
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  46208155 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 46208056  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || ||| |||||    
T  46208055 tcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 6 - 129
Target Start/End: Original strand, 42170356 - 42170479
Alignment:
Q  6 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctta 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||| |||||    
T  42170356 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctctta 42170455  T
Q  106 taaataggatcgaaggtagtatta 129  Q
    |||||| || || |||||||||||    
T  42170456 taaataagaccggaggtagtatta 42170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 36095686 - 36095811
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  36095686 ctccggtcttatttacaagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttat 36095785  T
Q  102 cttataaataggatcgaaggtagtat 127  Q
    ||||||||||||| || ||| |||||    
T  36095786 cttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6013341 - 6013450
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  6013341 cctccggtcctatttataagagaattttgggtcaacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 6013440  T
Q  101 tcttataaat 110  Q
    ||||||||||    
T  6013441 tcttataaat 6013450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 35513598 - 35513473
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||| |||||||||||| |||||| ||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  35513598 cctccgatcctatttataaaagaattctggatcaataaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 35513499  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| |||||| ||||    
T  35513498 tcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 33942944 - 33943053
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttata 107  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| | |||||    
T  33942944 tcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttata 33943043  T
Q  108 aataggatcg 117  Q
    ||||||||||    
T  33943044 aataggatcg 33943053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34988200 - 34988074
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |  |||| |||||||| ||||||||||||||||||||||    | ||| ||| ||  ||||||||||||| |||| |     
T  34988200 cctccggtcctatttataagaaatatttgagtcaacaatagttgatgtatctagttaaaaaagtggaccagatagatcaacttttgttgacccaaatgtc 34988101  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    ||| |||||||||| |||||| |||||    
T  34988100 tctaataaataggaccgaagggagtat 34988074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 29285790 - 29285881
Alignment:
Q  26 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaa 119  Q
    ||||| |||||||||||| |||||| ||||| |||||| ||  |  | |||||||||||||||||||||||||| ||||||||||| |||||||    
T  29285790 tttggatcaacaaaagtttatgtatgtagttcaaaatttagatc--agatattcacttttgttgacctaaatttatcttataaataagatcgaa 29285881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 43323145 - 43323065
Alignment:
Q  41 gttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaagg 121  Q
    |||||||||| | |||||||||| | |||||||| ||  ||||||||||||| || ||||||||||||||||||| |||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaataggatggaagg 43323065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9213641 - 9213514
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||| ||||||||||| |||||| ||| ||||||||||| ||||||||| | |||| ||| | |||||| ||| ||  ||||||||||||  |||| |     
T  9213641 cctcccgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtc 9213542  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    | |||||||||||| || ||| ||||||    
T  9213541 ttttataaataggaccggagggagtatt 9213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9027147 - 9027197
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatc 51  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||||    
T  9027147 cctccggtcctatttataagataaagttgggtcaacaaaagttgatgtatc 9027197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2131797 - 2131746
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||||||| |||| |||||  |||||||||||||||||||||||||||    
T  2131797 cctccggtcctacttatgagagacatttgggtcaacaaaagttgatgtatct 2131746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4238599 - 4238640
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  4238599 cctccggtcctatttataagagaaatttaggtcaacaaaagt 4238640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 10297984 - 10298025
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  10297984 cctccggtcctatttataagagaaatttaggtcaacaaaagt 10298025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 17653717 - 17653758
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  17653717 cctccggtcctatttataagagaaatttaggtcaacaaaagt 17653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19557177 - 19557136
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  19557177 cctccggtcctatttataagagaaatttaggtcaacaaaagt 19557136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21295451 - 21295410
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  21295451 cctccggtcctatttataagagaaatttaggtcaacaaaagt 21295410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22721936 - 22721977
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  22721936 cctccggtcctatttataagagaaatttaggtcaacaaaagt 22721977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 26019487 - 26019595
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    |||| |||||||||||||||||  || ||||||| |||||| |||||||| ||| |||||| |||| | ||| ||| || |||||| ||| || ||| ||    
T  26019487 tccgatcctatttataagagaaaatttggtcaaccaaagtttatgtatctggttcaaaatttagtcaagatacattaac-tttgttaacccaactttctc 26019585  T
Q  103 ttataaatag 112  Q
    ||||||||||    
T  26019586 ttataaatag 26019595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34080155 - 34080114
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  34080155 cctccggtcctatttataagagaaatttaggtcaacaaaagt 34080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 37508926 - 37508967
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  37508926 cctccggtcctatttataagagaaatttaggtcaacaaaagt 37508967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44785521 - 44785480
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  44785521 cctccggtcctatttataagagaaatttaggtcaacaaaagt 44785480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46208035 - 46208076
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  46208035 cctccggtcctatttataagagaaatttaggtcaacaaaagt 46208076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 49823506 - 49823465
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  49823506 cctccggtcctatttataagagaaatttaggtcaacaaaagt 49823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 2787956 - 2787916
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  2787956 ctccggtcctatttataagagaaatttaggtcaacaaaagt 2787916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5323332 - 5323272
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaa 61  Q
    |||||| | |||||||||||  || ||||||||||||||||||||||||| | ||||||||    
T  5323332 cctccgatactatttataagtaaaatttgggtcaacaaaagttgatgtatttggttaaaaa 5323272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9213521 - 9213572
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||||||||||| |||  |||  ||||||||||||||||||||||    
T  9213521 cctccggtcctatttataaaagacattttagtcaacaaaagttgatgtatct 9213572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 358
Target Start/End: Original strand, 20528961 - 20529032
Alignment:
Q  287 atattttgatctcaaccaccaataaaattaaagtttaatcttctcacacaacgcttgtaaattttcctcctt 358  Q
    |||||||||| ||||||||||||||  || ||| ||||||||||| || || || |||||| ||||||||||    
T  20528961 atattttgatttcaaccaccaataagtttgaagcttaatcttctcgcataatgcgtgtaaagtttcctcctt 20529032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 34988084 - 34988131
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||||| |||||  ||||||||||||||||||||| |||||    
T  34988084 cggtcctatttattagagacatttgggtcaacaaaagttgatctatct 34988131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 43323072 - 43323114
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    |||||||||||||| ||  ||||||||||||||||||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtat 43323114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45652074 - 45652128
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagt 55  Q
    ||||| |||||||||||||||||  |||| |||||||||| | ||||||||||||    
T  45652074 cctccagtcctatttataagagacatttgagtcaacaaaaatggatgtatctagt 45652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 54537474 - 54537440
Alignment:
Q  94 aaatttttcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||||||||||||||||| ||||||    
T  54537474 aaatttttcttataaataggatcgaagggagtatt 54537440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 8092595 - 8092644
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||||||||||||||  |||  ||||| |||||||||||||||    
T  8092595 tccggtcctatttataagagaaaattgaatcaactaaagttgatgtatct 8092644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 8437430 - 8437471
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||| ||||||    
T  8437430 cctccggtcctatttataagagaaatttaggtcaataaaagt 8437471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 8817507 - 8817470
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  8817507 cggtcctatttataagagaaatttaggtcaacaaaagt 8817470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 9111615 - 9111578
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  9111615 cggtcctatttataagagaaatttaggtcaacaaaagt 9111578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 14848276 - 14848313
Alignment:
Q  15 tataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  14848276 tataagagaaaattgggtcaacaaaagttgatgtatct 14848313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 35513482 - 35513519
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  35513482 cggtcctatttataagagaaatttaggtcaacaaaagt 35513519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36095805 - 36095764
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  36095805 cctccggtcctatttataagataaatttaggtcaacaaaagt 36095764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38964397 - 38964438
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  38964397 cctccggtcctatttataagagaaatttagatcaacaaaagt 38964438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42170471 - 42170430
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  42170471 cctccggtcttatttataagagaaatttaggtcaacaaaagt 42170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42507480 - 42507439
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  42507480 cctccggtcctatttataatagaaatttaggtcaacaaaagt 42507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48340402 - 48340443
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||| ||||||| ||| |||||||||||||    
T  48340402 cctccggtcctatttacaagagaaatttaggtcaacaaaagt 48340443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 51406678 - 51406719
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  51406678 cctccggtcttatttataagagaaatttaggtcaacaaaagt 51406719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 8092684 - 8092600
Alignment:
Q  30 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    |||||||| |||||||||||||| |||||||||| |||| | ||| ||  ||||| |||||   || ||| ||||||||||||||    
T  8092684 ggtcaacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaatagga 8092600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 8951943 - 8951987
Alignment:
Q  43 tgatgtatctagttaaaaattcagtccaaatatattcacttttgt 87  Q
    |||||||| | ||||||||||||||||||||| ||| ||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgt 8951987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 17653796 - 17653844
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatt 128  Q
    ||||||||||||| ||| || |||||||||||||| || ||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtatt 17653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 33128212 - 33128260
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    |||| |||||| ||||||||||| ||| |||||||||||||| ||||||    
T  33128212 ctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtat 33128260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 40691120 - 40691080
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||||| ||| ||| |||||||||    
T  40691120 ctccggtcctatttataagagaaatttaggttaacaaaagt 40691080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 45093613 - 45093581
Alignment:
Q  83 tttgttgacctaaatttttcttataaataggat 115  Q
    |||||||| ||||||||||||||||||||||||    
T  45093613 tttgttgatctaaatttttcttataaataggat 45093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 5e-57; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 1738452 - 1738580
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  1738452 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 1738551  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  1738552 tcttataaataggaccggaggtagtatta 1738580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7240874 - 7240746
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  7240874 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 7240775  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  7240774 tcttataaataggaccggaggtagtatta 7240746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 46840985 - 46840858
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  46840985 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 46840886  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  46840885 tcttataaataggaccggaggtagtatt 46840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9268881 - 9268753
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  9268881 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9268782  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| |  |||||||||||    
T  9268781 tcttataaataggaccagaggtagtatta 9268753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7482350 - 7482224
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  7482350 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 7482251  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  7482250 tcttataaataggaccggaggtagtat 7482224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38063918 - 38064044
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  38063918 cctctggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 38064017  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  38064018 tcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 23314144 - 23314269
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  23314144 cctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 23314243  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  23314244 tcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 31319404 - 31319529
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  31319404 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 31319503  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  31319504 tcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22285824 - 22285696
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  22285824 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 22285725  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || ||| |||||||    
T  22285724 tcttataaataggaccggagggagtatta 22285696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 1565738 - 1565861
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctt 104  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  1565738 cggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctt 1565837  T
Q  105 ataaataggatcgaaggtagtatt 128  Q
    |||||||||| || ||||||||||    
T  1565838 ataaataggaccggaggtagtatt 1565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4790373 - 4790247
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||    
T  4790373 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttt 4790274  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  4790273 tcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 36583520 - 36583395
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||     
T  36583520 cctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttc 36583421  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  36583420 tcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 38441585 - 38441460
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||     
T  38441585 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttc 38441486  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  38441485 tcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 28536756 - 28536882
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||     
T  28536756 cctccggtcctatttataagagaattttggatcaataaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttc 28536855  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  28536856 tcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 94323 - 94436
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||     
T  94323 cctccgatcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttc 94422  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  94423 tcttataaatagga 94436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 36016206 - 36016314
Alignment:
Q  6 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctta 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  36016206 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 36016305  T
Q  106 taaatagga 114  Q
    |||||||||    
T  36016306 taaatagga 36016314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 33418500 - 33418392
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |    
T  33418500 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttct 33418401  T
Q  102 cttataaat 110  Q
    |||| ||||    
T  33418400 cttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 9575530 - 9575421
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctt 104  Q
    ||||||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||| |||||  || ||||||||||||| || ||| ||||    
T  9575530 cggtcctatttataagagaaagtttggtcaacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctctt 9575431  T
Q  105 ataaatagga 114  Q
    | ||||||||    
T  9575430 acaaatagga 9575421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 40840126 - 40840237
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||||||||||| ||| | ||||||| || ||| ||| ||    
T  40840126 tccggtcctatttataagagaaatttttgtcaacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctc 40840225  T
Q  103 ttataaatagga 114  Q
    || |||||||||    
T  40840226 ttctaaatagga 40840237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 7269412 - 7269520
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    ||||||||||||||||||||||  |||||| |||||||||||||| |||| ||||||||||||||  | ||| ||  | ||||||||||| || ||||||    
T  7269412 tccggtcctatttataagagaaagttgggttaacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttc 7269511  T
Q  103 ttataaata 111  Q
    |||||||||    
T  7269512 ttataaata 7269520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7661201 - 7661075
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||| ||||||||||||| ||||  ||||||||||||||||||||||||||||||  ||  ||    |||  || ||  |||||| ||||| |||||||     
T  7661201 cctctggtcctatttatatgagacatttgggtcaacaaaagttgatgtatctagtccaatttttttaccagctacatcaacttttattgacataaatttc 7661102  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    ||||||||||||||||||||| |||||    
T  7661101 tcttataaataggatcgaagggagtat 7661075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 29993251 - 29993302
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctag 54  Q
    ||||||||||||| ||||||||| ||||||||||||||||| || |||||||    
T  29993251 tccggtcctatttgtaagagaatgttgggtcaacaaaagttaatatatctag 29993302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1565854 - 1565813
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  1565854 cctccggtcctatttataagagaaatttaggtcaacaaaagt 1565813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1738572 - 1738531
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  1738572 cctccggtcctatttataagagaaatttaggtcaacaaaagt 1738531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7240754 - 7240795
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  7240754 cctccggtcctatttataagagaaatttaggtcaacaaaagt 7240795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7482230 - 7482271
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  7482230 cctccggtcctatttataagagaaatttaggtcaacaaaagt 7482271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22285704 - 22285745
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  22285704 cctccggtcctatttataagagaaatttaggtcaacaaaagt 22285745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23314264 - 23314223
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  23314264 cctccggtcctatttataagagaaatttaggtcaacaaaagt 23314223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 28536876 - 28536835
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  28536876 cctccggtcctatttataagagaaatttaggtcaacaaaagt 28536835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31319524 - 31319483
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  31319524 cctccggtcctatttataagagaaatttaggtcaacaaaagt 31319483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 36016321 - 36016280
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  36016321 cctccggtcctatttataagagaaatttaggtcaacaaaagt 36016280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 36583400 - 36583441
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  36583400 cctccggtcctatttataagagaaatttaggtcaacaaaagt 36583441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 38064038 - 38063997
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  38064038 cctccggtcctatttataagagaaatttaggtcaacaaaagt 38063997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46840865 - 46840906
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  46840865 cctccggtcctatttataagagaaatttaggtcaacaaaagt 46840906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 94442 - 94402
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  94442 ctccggtcctatttataagagaaatttaggtcaacaaaagt 94402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7269530 - 7269478
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatcta 53  Q
    ||||||||| ||||||||||| ||  |||||||||||||| ||||||||||||    
T  7269530 cctccggtcttatttataagaaaaagttgggtcaacaaaaattgatgtatcta 7269478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 46877713 - 46877665
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatc 51  Q
    ||||||||||| ||||||||||  ||||||||||||||||| |||||||    
T  46877713 tccggtcctatatataagagaaagttgggtcaacaaaagttaatgtatc 46877665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 1506907 - 1507014
Alignment:
Q  251 aagcctccaataataataatcgaaatcaaaggtaatatattttgatctcaaccaccaataaaattaaagtttaatcttctcacacaacgcttgtaaattt 350  Q
    ||||||||| ||||  |||||||||  |||||||||  |||||||| ||||  |||||||| | | ||| ||||| |||||| | || | ||||||||||    
T  1506907 aagcctccactaatggtaatcgaaaataaaggtaatgcattttgatttcaattaccaataagactgaagcttaattttctcatataaagtttgtaaattt 1507006  T
Q  351 tcctcctt 358  Q
    ||||||||    
T  1507007 tcctcctt 1507014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 2853681 - 2853736
Alignment:
Q  6 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaa 61  Q
    |||| ||||| |||||||| ||||| |||||||||||  |||||||||||||||||    
T  2853681 ggtcttatttgtaagagaaatttggatcaacaaaagtatatgtatctagttaaaaa 2853736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 36033241 - 36033295
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattca 65  Q
    ||||||||||| || ||| |||||||||||||||||||||||  | |||||||||    
T  36033241 tatttataagataaatttaggtcaacaaaagttgatgtatctgatcaaaaattca 36033295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9268761 - 9268802
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||| ||||||||||||||||||| ||| |||||||||||||    
T  9268761 cctctggtcctatttataagagaaatttaggtcaacaaaagt 9268802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 36583479 - 36583528
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||| ||| || ||||||||||||||||| ||| |||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatta 36583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38441465 - 38441506
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| |||  ||||||||||||    
T  38441465 cctccggtcctatttataagagaaatttatgtcaacaaaagt 38441506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 39019840 - 39019893
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaa 61  Q
    |||||||||||||||   ||||| ||||||||| ||||||||||||||| ||||    
T  39019840 tcctatttataagaggcatttggatcaacaaaaattgatgtatctagttcaaaa 39019893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 5e-57; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 47833736 - 47833608
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  47833736 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 47833637  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  47833636 tcttataaataggaccggaggtagtatta 47833608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3372246 - 3372118
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3372246 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3372147  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  3372146 tcttataaataggaccggaggtagtatta 3372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 48336388 - 48336260
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  48336388 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 48336289  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  48336288 tcttataaataggaccggaggtagtatta 48336260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 51894587 - 51894715
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||    
T  51894587 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttt 51894686  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  51894687 tcttataaataggaccggaggtagtatta 51894715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 47838622 - 47838748
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||     
T  47838622 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttc 47838721  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    ||||||||||||||||| |||||||||    
T  47838722 tcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 3993101 - 3992972
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||     
T  3993101 cctccggtcttatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttc 3993002  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  3993001 tcttataaataggaccggaggtagtattaa 3992972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6121898 - 6122023
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||     
T  6121898 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 6121997  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  6121998 tcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 20538691 - 20538816
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  20538691 cctccggtcctatttataagagaattttgggtcaacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 20538790  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  20538791 tcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 53337495 - 53337370
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  53337495 cctccggtcctatttataagagaattttgggtcaataaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 53337396  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  53337395 tcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 42797857 - 42797729
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  42797857 cctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 42797758  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    ||||||| |||||| || |||||||||||    
T  42797757 tcttatatataggaccggaggtagtatta 42797729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 33621921 - 33621795
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  33621921 cctccggtcctatttataagataattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 33621822  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||| | |||| |||||||    
T  33621821 tcttataaatagaaccgaaagtagtat 33621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 24704495 - 24704370
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  24704495 cctccgatcctatttataagagaattttgggtcaacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 24704396  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  24704395 tcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 46797850 - 46797725
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  46797850 cctccggtcctatttataagagaattttgggtcaacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 46797751  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||| | || ||||||||    
T  46797750 tcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 2 - 126
Target Start/End: Complemental strand, 5987000 - 5986876
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |    
T  5987000 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttct 5986901  T
Q  102 cttataaataggatcgaaggtagta 126  Q
    ||||||||||| |||| ||||||||    
T  5986900 cttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 41469771 - 41469898
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  41469771 cctccggtcctatttataagagaatttttggtcaacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41469870  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    | |||||||||||| |||||| ||||||    
T  41469871 ttttataaataggaccgaaggaagtatt 41469898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 43900674 - 43900547
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||     
T  43900674 cctccggtcctatttataagagaattttgggttaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttc 43900575  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||| ||||||    
T  43900574 tcttataaataggaccggagggagtatt 43900547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 3904688 - 3904814
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3904688 cctccggtcctatttataagagaattttgggtcaacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3904787  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    | |||||||||||| || |||||||||    
T  3904788 ttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7579435 - 7579309
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||     
T  7579435 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttc 7579336  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  7579335 tcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3422185 - 3422073
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||     
T  3422185 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttc 3422087  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  3422086 tcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 52756796 - 52756687
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctt 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  52756796 cggtcctatttataaaagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctctt 52756697  T
Q  105 ataaatagga 114  Q
    ||||||||||    
T  52756696 ataaatagga 52756687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 40913194 - 40913320
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||||||     
T  40913194 cctccggtcctatttataagagaaatttggatcaacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttc 40913293  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || ||| |||||    
T  40913294 tcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 33551312 - 33551200
Alignment:
Q  15 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  33551312 tataagagaattttgggtttacaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaatagga 33551213  T
Q  115 tcgaaggtagtat 127  Q
     || |||||||||    
T  33551212 ccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 41615683 - 41615796
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| |||||||||| ||| |||||||||||||||| ||| ||    
T  41615683 tccggtcctatttataagagaaaattggatcaacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctc 41615782  T
Q  103 ttataaataggatc 116  Q
    ||||||||||||||    
T  41615783 ttataaataggatc 41615796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 26231688 - 26231576
Alignment:
Q  15 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    |||||||||||||| |||  |||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  26231688 tataagagaattttcggtttacaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaatagga 26231589  T
Q  115 tcgaaggtagtat 127  Q
     || |||||||||    
T  26231588 ccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 29845764 - 29845644
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagtt-gatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattt 99  Q
    ||||||||||||||||||||||      || |||||||||||| ||||||| |||||||||||||||| |||||||||| | ||||||||||||||||||    
T  29845764 cctccggtcctatttataagag------ggatcaacaaaagtttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaattt 29845672  T
Q  100 ttcttataaataggatcgaaggtagtat 127  Q
     |||||||| |||||  ||||| |||||    
T  29845671 ctcttataagtaggactgaagggagtat 29845644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 111
Target Start/End: Original strand, 50430431 - 50430533
Alignment:
Q  9 cctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataa 108  Q
    ||||||||||||| |  ||||||||||||||| ||||||||||| |||||||||||| |||||||| ||  ||||||||||||| || ||  ||||||||    
T  50430431 cctatttataagatatatttgggtcaacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataa 50430530  T
Q  109 ata 111  Q
    |||    
T  50430531 ata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 17344328 - 17344227
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    |||||||||||||| ||||| ||||||||||||||||||||   ||||||||||||| || ||| ||  |||||||||||  ||| ||| ||||||||||    
T  17344328 tatttataagagaaatttggatcaacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaat 17344229  T
Q  111 ag 112  Q
    ||    
T  17344228 ag 17344227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 25855182 - 25855095
Alignment:
Q  27 ttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    ||||||| |||||||| ||||||| | ||||||||||||||||||||| ||| ||||||||||||  || ||| ||| ||||||||||    
T  25855182 ttgggtctacaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaatagga 25855095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 4780420 - 4780358
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||||||||  |||||||||    
T  4780420 cctccggtcctatttataagagaaattttggtcaacaaaagttaatgtatctgattaaaaatt 4780358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45478217 - 45478151
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagt 67  Q
    |||||| ||||||||||||||||| | |||||||| |||||||||||||||  ||||||||||||||    
T  45478217 cctccgatcctatttataagagaaatgtgggtcaataaaagttgatgtatccggttaaaaattcagt 45478151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 17236912 - 17236864
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||    
T  17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtat 17236864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3372126 - 3372167
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3372126 cctccggtcctatttataagagaaatttaggtcaacaaaagt 3372167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3992981 - 3993022
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3992981 cctccggtcctatttataagagaaatttcggtcaacaaaagt 3993022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 17236845 - 17236906
Alignment:
Q  54 gttaaaaattcagtccaaa-tatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    ||||||||||||||| ||| || ||  ||||||||||||| |||||||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaatagga 17236906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 20538811 - 20538770
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  20538811 cctccggtcctatttataagagaaatttaggtcaacaaaagt 20538770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24704375 - 24704416
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  24704375 cctccggtcctatttataagagaaatttaggtcaacaaaagt 24704416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 31013117 - 31013036
Alignment:
Q  30 ggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaata 111  Q
    |||||||||||| |||||||||||||||| |||| |  ||||||| ||  ||||||||||| |||||| | | |||||||||    
T  31013117 ggtcaacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33551206 - 33551247
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  33551206 cctccggtcctatttataagagaaatttaggtcaacaaaagt 33551247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 43900554 - 43900595
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  43900554 cctccggtcctatttataagagaaatttaggtcaacaaaagt 43900595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44900205 - 44900092
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||  ||||   | |||||||||||||||||| |||||| |||||| | |  | ||| ||||||  |||||||||||||  ||| |     
T  44900205 cctccggtcctatttacgagagtcgtctgggtcaacaaaagttgacgtatctggttaaacaattggaccagatatatcaacttttgttgaccagaatatc 44900106  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  44900105 tcttataaatagga 44900092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 47833616 - 47833657
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  47833616 cctccggtcctatttataagagaaatttaggtcaacaaaagt 47833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 48336268 - 48336309
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  48336268 cctccggtcctatttataagagaaatttaggtcaacaaaagt 48336309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 53337375 - 53337416
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  53337375 cctccggtcctatttataagagaaatttaggtcaacaaaagt 53337416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 1716417 - 1716365
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaa 60  Q
    ||||||||||||||||| ||| ||||||| |||||||||| |||| |||||||    
T  1716417 tcctatttataagagaagtttaggtcaaccaaagttgatgcatctggttaaaa 1716365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26231582 - 26231622
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaag 41  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  26231582 cctccggtcctatttataagagaaatttaggtcaacaaaag 26231622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1716306 - 1716357
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||| |||||||||||||   || |||||||||||||||||||||||    
T  1716306 cctccggtcttatttataagagataatttggtcaacaaaagttgatgtatct 1716357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44900085 - 44900136
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||||||||||||||||||  ||  ||||||||||||||||| |||||    
T  44900085 cctccggtcctatttataagagatattctggtcaacaaaagttgatatatct 44900136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 6924724 - 6924801
Alignment:
Q  36 caaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    |||||||||||| ||||  || |||||| || ||||||| ||| |||||||||||||| || |||||||||| ||||||    
T  6924724 caaaagttgatgcatctgattcaaaatttagaccaaatacattaacttttgttgacct-aacttttcttatatatagga 6924801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 112
Target Start/End: Original strand, 32822295 - 32822325
Alignment:
Q  82 ttttgttgacctaaatttttcttataaatag 112  Q
    |||||||||||||||||||||||||||||||    
T  32822295 ttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 43095230 - 43095336
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctt 104  Q
    ||||| |||||||||||||  |||||| |||||||| || |||||| | ||| ||||||  | ||| ||| ||| | |||||||||| ||||| | ||||    
T  43095230 cggtcttatttataagagacgtttgggccaacaaaaattaatgtatatggttcaaaatttggaccagatacattaatttttgttgacttaaatatctctt 43095329  T
Q  105 ataaata 111  Q
    |||||||    
T  43095330 ataaata 43095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 3904808 - 3904767
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||| |||| ||| |||||||||||||    
T  3904808 cctccggtcctatttataaaagaaatttaggtcaacaaaagt 3904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6122018 - 6121977
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  6122018 cctccggtcctatttataagagaaatttagatcaacaaaagt 6121977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7579315 - 7579356
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  7579315 cctccggtcctatttataagagaaatttaggttaacaaaagt 7579356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 40913314 - 40913273
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| | |||||||||||    
T  40913314 cctccggtcctatttataagagaaatttagatcaacaaaagt 40913273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42797737 - 42797778
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||| |||||||||| ||| |||||||||||||    
T  42797737 cctccggtcctatatataagagaaatttaggtcaacaaaagt 42797778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 45725977 - 45725908
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 74  Q
    ||||||||||||||||||||  ||  ||||||||||||| | |||| ||||||| |||| |||| |||||    
T  45725977 cggtcctatttataagagaaagtttcgtcaacaaaagttaacgtatttagttaagaatttagtctaaata 45725908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46797730 - 46797771
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||| ||||||||||||||| ||| |||||||||||||    
T  46797730 cctccggttctatttataagagaaatttaggtcaacaaaagt 46797771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47838742 - 47838701
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||| ||||||||||||||||| ||| |||||||||||||    
T  47838742 cctccgatcctatttataagagaaatttcggtcaacaaaagt 47838701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 48336347 - 48336396
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||| ||| ||||||||||||||||| || ||| |||||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagtatta 48336396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 51894707 - 51894666
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  51894707 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 51894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 41594660 - 41594708
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    ||||||||| |  ||||||||||  ||||||||||||||||||||||||    
T  41594660 ctccggtcccacatataagagaaagttgggtcaacaaaagttgatgtat 41594708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 41594765 - 41594673
Alignment:
Q  15 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttata 107  Q
    ||||||||||  ||||||||||  |||||||||||||| ||| ||||||  | ||| ||| ||  ||||||||||||| || ||| |||||||    
T  41594765 tataagagaaagttgggtcaacttaagttgatgtatctggttcaaaatttggaccatatacatcaacttttgttgacccaactttctcttata 41594673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 52756681 - 52756721
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||||| ||| |||||||| ||||    
T  52756681 ctccggtcctatttataagagaaatttaggtcaacataagt 52756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 5e-57; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 27159363 - 27159491
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  27159363 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 27159462  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  27159463 tcttataaataggaccggaggtagtatta 27159491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 44668098 - 44668226
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  44668098 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44668197  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  44668198 tcttataaataggaccggaggtagtatta 44668226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9981772 - 9981646
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  9981772 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 9981673  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  9981672 tcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 26471070 - 26471199
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  26471070 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 26471169  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  26471170 tcttataaataggaccggaggtagtattaa 26471199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 31842800 - 31842925
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  31842800 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 31842899  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  31842900 tcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 39401971 - 39402096
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  39401971 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 39402070  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  39402071 tcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 44955212 - 44955336
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44955212 ctccggtcctatttataagagaattttaggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaattttt 44955311  T
Q  102 cttataaataggatcgaaggtagta 126  Q
    ||||||||||||| || ||||||||    
T  44955312 cttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 11796058 - 11795931
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||     
T  11796058 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttc 11795959  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  11795958 tcttataaataggaccggaggtagtatt 11795931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 14984962 - 14984835
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  14984962 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 14984863  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || || |||||||    
T  14984862 tcttataaataggaccggagatagtatt 14984835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 47216704 - 47216829
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  47216704 cctccggtactatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 47216803  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  47216804 tcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34042821 - 34042695
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||     
T  34042821 cctccggttctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttc 34042722  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  34042721 tcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 1051013 - 1050888
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||     
T  1051013 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttc 1050914  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  1050913 tcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12483633 - 12483762
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||     
T  12483633 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttc 12483732  T
Q  101 tcttataaataggatcgaaggtagtattaa 130  Q
    |||||||||||||| || ||||||||||||    
T  12483733 tcttataaataggaccggaggtagtattaa 12483762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 47777486 - 47777599
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||     
T  47777486 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttc 47777585  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  47777586 tcttataaatagga 47777599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 25694444 - 25694316
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||| ||||||||     
T  25694444 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttc 25694345  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||||||  ||| |||||||    
T  25694344 tcttataaataggatcagagggagtatta 25694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 47588352 - 47588471
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  47588352 tatttataagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 47588451  T
Q  111 aggatcgaaggtagtattaa 130  Q
    | || |  ||||||||||||    
T  47588452 aagaccagaggtagtattaa 47588471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 23278021 - 23278131
Alignment:
Q  16 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||     
T  23278021 ataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggac 23278120  T
Q  116 cgaaggtagta 126  Q
    || ||||||||    
T  23278121 cggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17556878 - 17556764
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatata-ttcacttttgttgacctaaattt 99  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||| |||    
T  17556878 cctccggtcctatttataagagaaacttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaacttt 17556779  T
Q  100 ttcttataaatagga 114  Q
     ||||||||||||||    
T  17556778 ctcttataaatagga 17556764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 47969820 - 47969706
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||     
T  47969820 cctccggtcctatttataaaataattttggatcaacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttc 47969721  T
Q  101 tc-ttataaatagga 114  Q
    || ||||||||||||    
T  47969720 tctttataaatagga 47969706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 11897179 - 11897053
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||| || ||| ||  |||||||||||||||| |||     
T  11897179 cctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttc 11897080  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || ||| |||||    
T  11897079 tcttataaataggaccggagggagtat 11897053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11989906 - 11989791
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||| |||| |||| ||||| |||| ||||||||| | |||||||||||||||||||||||||   ||||||||||| || |||     
T  11989906 cctccggtcctatttataaaagaaatttgagtcaataaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttc 11989807  T
Q  101 tcttataaataggatc 116  Q
    ||||||||||| ||||    
T  11989806 tcttataaataagatc 11989791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 16448114 - 16448239
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    |||||||| |||||||| | |||| ||||||||||||||||| |||||||| ||| ||||||||||||| ||| ||  ||||||||||||| || ||| |    
T  16448114 ctccggtcttatttataggggaatattgggtcaacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttct 16448213  T
Q  102 cttataaataggatcgaaggtagtat 127  Q
    ||||||||||||| || ||| |||||    
T  16448214 cttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 37552263 - 37552153
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttct 103  Q
    ||||||||||||||||||||| ||||||||||||||| |  |||||||| ||||||||||||||||| ||| ||  ||| ||||||||  || ||| |||    
T  37552263 ccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatct 37552164  T
Q  104 tataaatagga 114  Q
    |||||||||||    
T  37552163 tataaatagga 37552153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 12213484 - 12213589
Alignment:
Q  6 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctta 105  Q
    |||||||||||| ||||||  |||||||||||||| ||||| ||| |||||||||||||| || ||||| ||| | ||||||||||||||  || |||||    
T  12213484 ggtcctatttattagagaaacttgggtcaacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctctta 12213583  T
Q  106 taaata 111  Q
    ||||||    
T  12213584 taaata 12213589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16448233 - 16448182
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  16448233 cctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatct 16448182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 121
Target Start/End: Complemental strand, 12043726 - 12043609
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    ||||||||||||||||||| || |||   ||||||||| || |||||||| |||||||||| | | |||||| ||  |||||||||||| ||||| | |     
T  12043726 tccggtcctatttataagaaaaatttaaatcaacaaaaattaatgtatcttgttaaaaattgaat-caaatacatcaacttttgttgacttaaatatctt 12043628  T
Q  103 ttataaataggatcgaagg 121  Q
    |||||||||||||||||||    
T  12043627 ttataaataggatcgaagg 12043609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11897059 - 11897110
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||||||||||||||||  || |||||||||||||||||||||||    
T  11897059 cctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatct 11897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 1598389 - 1598458
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaata 74  Q
    |||| ||||||||||||||||| | ||| ||||||||| ||||||||| | |||||||||||||||||||||    
T  1598389 tccgatcctatttataagagaaatatgg-tcaacaaaaattgatgtatat-gttaaaaattcagtccaaata 1598458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 571622 - 571542
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacc 92  Q
    |||||||| |||||| || | |||||||||||| ||||| |||||| ||||||||||| ||||| | | |||||||||||||    
T  571622 tatttataggagaatatttgatcaacaaaagttaatgtacctagttcaaaattcagtctaaataca-taacttttgttgacc 571542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1050893 - 1050934
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  1050893 cctccggtcctatttataagagaaatttaggtcaacaaaagt 1050934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9981652 - 9981693
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  9981652 cctccggtcctatttataagagaaatttaggtcaacaaaagt 9981693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 11795938 - 11795979
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  11795938 cctccggtcctatttataagagaaatttaggtcaacaaaagt 11795979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12483753 - 12483712
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  12483753 cctccggtcctatttataagagaaatttaggtcaacaaaagt 12483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26471190 - 26471149
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  26471190 cctccggtcctatttataagagaaatttaggtcaacaaaagt 26471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27159483 - 27159442
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  27159483 cctccggtcctatttataagagaaatttaggtcaacaaaagt 27159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 31748423 - 31748338
Alignment:
Q  34 aacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaa 119  Q
    ||||||||||||| ||||| ||| |||||| || | |||||||| || ||||||||| ||||||||| |||| | ||| |||||||    
T  31748423 aacaaaagttgatatatcttgtttaaaatttagactaaatatatacatttttgttgatctaaattttacttacatataagatcgaa 31748338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31842920 - 31842879
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  31842920 cctccggtcctatttataagagaaatttaggtcaacaaaagt 31842879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 39402091 - 39402050
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  39402091 cctccggtcctatttataagagaaatttaggtcaacaaaagt 39402050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44668218 - 44668177
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  44668218 cctccggtcctatttataagagaaatttaggtcaacaaaagt 44668177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 47216824 - 47216783
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  47216824 cctccggtcctatttataagagaaatttaggtcaacaaaagt 47216783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 14984843 - 14984883
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  14984843 ctccggtcctatttataagagaaatttaggtcaacaaaagt 14984883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 23278126 - 23278087
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  23278126 cctccggtcctatttataagagaaatttaggtcaacaaaa 23278087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 34042701 - 34042740
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaa 40  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  34042701 cctccggtcctatttataagagaaatttaggtcaacaaaa 34042740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 12047223 - 12047118
Alignment:
Q  10 ctatttataagagaattttgggtcaacaaaagttgatgtatctagtt-aaaaattcagtccaaatatattcac-ttttgttgacctaaatttttcttata 107  Q
    ||||||||||||||| ||||| |||| |||  |||||||||| |||| |||||||||||| ||||| | |||| ||||||| ||  || ||| |||||||    
T  12047223 ctatttataagagaaatttggatcaataaagattgatgtatccagttaaaaaattcagtctaaataca-tcactttttgttaactcaactttctcttata 12047125  T
Q  108 aatagga 114  Q
    |||||||    
T  12047124 aatagga 12047118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 267 - 305
Target Start/End: Original strand, 19016022 - 19016060
Alignment:
Q  267 taatcgaaatcaaaggtaatatattttgatctcaaccac 305  Q
    |||||||||||||| ||||||||||||||| ||||||||    
T  19016022 taatcgaaatcaaaagtaatatattttgatttcaaccac 19016060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 21537993 - 21537943
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||| || ||||||||||||||  ||| ||||||||||||||||||||||    
T  21537993 ctccgatcttatttataagagaaaattgagtcaacaaaagttgatgtatct 21537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 47777603 - 47777565
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  47777603 ccggtcctatttataagagaaatttaggtcaacaaaagt 47777565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 19391999 - 19391910
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttga 90  Q
    ||||| ||||||| ||||||||||  ||| || |||||||||| |||||| |  | |||||||  ||| ||||||||| |||||||||||    
T  19391999 cctccagtcctatatataagagaaagttgagtgaacaaaagttaatgtattttctcaaaaatttggtcgaaatatattaacttttgttga 19391910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 44955331 - 44955290
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||||||||||||||||||| || ||| |||||||||||||    
T  44955331 cctccggtcctatttataagaaaaatttaggtcaacaaaagt 44955290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 5392267 - 5392211
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaa 61  Q
    |||||| || |||||||||| ||| |||||| |||||||||||||| | ||||||||    
T  5392267 cggtccaatatataagagaaatttaggtcaataaaagttgatgtatttggttaaaaa 5392211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 128
Target Start/End: Original strand, 11897138 - 11897186
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatt 128  Q
    ||||||||||||| |||||| |||||||||||||| || ||| ||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 11897186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 12062568 - 12062616
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||||||||||| |||  ||| | |||||||||||||||||||||    
T  12062568 ccggtcctatttataaaagatattttgatcaacaaaagttgatgtatct 12062616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 37990018 - 37990145
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  37990018 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 37990117  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  37990118 tcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 41478644 - 41478771
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  41478644 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 41478743  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  41478744 tcttataaataggaccggaggtagtatt 41478771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3055683 - 3055557
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  3055683 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 3055584  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  3055583 tcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15896967 - 15896841
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  15896967 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 15896868  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  15896867 tcttataaataggaccggaggtagtat 15896841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44398811 - 44398685
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  44398811 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 44398712  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  44398711 tcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 13197715 - 13197840
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  13197715 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 13197814  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  13197815 tcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 16243790 - 16243914
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttc 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16243790 tccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttc 16243889  T
Q  103 ttataaataggatcgaaggtagtat 127  Q
    |||||||||||| || || ||||||    
T  16243890 ttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 44397669 - 44397546
Alignment:
Q  4 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttct 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||    
T  44397669 ccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 44397570  T
Q  104 tataaataggatcgaaggtagtat 127  Q
    ||||||||||| || |||||||||    
T  44397569 tataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 38917527 - 38917653
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  38917527 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaattta 38917626  T
Q  101 tcttataaataggatcgaaggtagtat 127  Q
    |||||||||||||| || |||||||||    
T  38917627 tcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 12337942 - 12338067
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  12337942 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttt 12338041  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||| | || ||||||||    
T  12338042 tcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6648524 - 6648649
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||     
T  6648524 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttc 6648623  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  6648624 tcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15372351 - 15372238
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||     
T  15372351 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 15372252  T
Q  101 tcttataaatagga 114  Q
    ||||||||||||||    
T  15372251 tcttataaatagga 15372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 16044322 - 16044447
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  16044322 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 16044421  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  16044422 tcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 37666615 - 37666740
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||     
T  37666615 cctccggtcctatttataagagaattttgggtcaactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttc 37666714  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  37666715 tcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13344609 - 13344482
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||     
T  13344609 cctccggtcctatttataagagaattttggatcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttc 13344510  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||| | || ||||||||||    
T  13344509 tcttataaatagaaccggaggtagtatt 13344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9047760 - 9047870
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||     
T  9047760 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttc 9047859  T
Q  101 tcttataaata 111  Q
    |||||||||||    
T  9047860 tcttataaata 9047870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30099187 - 30099310
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||     
T  30099187 cctccggtcctatttattagagaattttgggtcaacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttc 30099286  T
Q  101 tcttataaataggatcgaaggtag 124  Q
    ||||||||||||||||| ||||||    
T  30099287 tcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41492901 - 41493014
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||     
T  41492901 cctccggtcctatttataagagaaatttgggtcaacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttc 41493000  T
Q  101 tcttataaatagga 114  Q
    | ||||||||||||    
T  41493001 ttttataaatagga 41493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 4683951 - 4684063
Alignment:
Q  15 tataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  4683951 tataagagaattttcggtttacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 4684050  T
Q  115 tcgaaggtagtat 127  Q
     || |||||||||    
T  4684051 ccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 44804583 - 44804680
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatt 98  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  44804583 cctccggtcctatttataagagaattttaagttaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 12170414 - 12170529
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaat 110  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||| ||| |||| |||||    
T  12170414 tatttataagagaaacttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaat 12170513  T
Q  111 aggatcgaaggtagta 126  Q
    ||||||| ||| ||||    
T  12170514 aggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 16734908 - 16734802
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||| ||||||||||||||||||  ||| || ||||||||||||||||| | ||||||||||||||||| ||| ||  ||||||||||||| || |||     
T  16734908 cctccagtcctatttataagagaaagttgagtaaacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttc 16734809  T
Q  101 tcttata 107  Q
    |||||||    
T  16734808 tcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 31150769 - 31150662
Alignment:
Q  5 cggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttctt 104  Q
    ||||||||||||||||||||   ||||||||||||      |||||||||||||||||| |||||||||| ||  ||||||||||||  || ||| ||||    
T  31150769 cggtcctatttataagagaaacatgggtcaacaaat-----tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctctt 31150675  T
Q  105 ataaataggatcg 117  Q
    |||||||||||||    
T  31150674 ataaataggatcg 31150662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 41453149 - 41453084
Alignment:
Q  36 caaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaattttt 101  Q
    ||||||||||||||| | ||||||||||||||||||||| ||| |||||| ||||||||| |||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaacttttt 41453084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 3055563 - 3055604
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  3055563 cctccggtcctatttataagagaaatttaggtcaacaaaagt 3055604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4684057 - 4684016
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  4684057 cctccggtcctatttataagagaaatttaggtcaacaaaagt 4684016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13197835 - 13197794
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  13197835 cctccggtcctatttataagagaaatttaggtcaacaaaagt 13197794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13724107 - 13724220
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||| ||||||  | | ||||||||||||||||||||| | |||||||| |  | ||| ||| ||  |||||||||||||  ||| |     
T  13724107 cctccggtcctatttacaagagacatctaggtcaacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatc 13724206  T
Q  101 tcttataaatagga 114  Q
     |||||||||||||    
T  13724207 gcttataaatagga 13724220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15896847 - 15896888
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  15896847 cctccggtcctatttataagagaaatttaggtcaacaaaagt 15896888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 16044442 - 16044401
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  16044442 cctccggtcctatttataagagaaatttaggtcaacaaaagt 16044401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37666735 - 37666694
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  37666735 cctccggtcctatttataagagaaatttaggtcaacaaaagt 37666694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 37990138 - 37990097
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  37990138 cctccggtcctatttataagagaaatttaggtcaacaaaagt 37990097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41478764 - 41478723
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  41478764 cctccggtcctatttataagagaaatttaggtcaacaaaagt 41478723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44397552 - 44397593
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  44397552 cctccggtcctatttataagagaaatttaggtcaacaaaagt 44397593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44398691 - 44398732
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  44398691 cctccggtcctatttataagagaaatttaggtcaacaaaagt 44398732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 13538957 - 13538917
Alignment:
Q  182 ataaagttggtaaataacatgaaacagaaatagatgattaa 222  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  13538957 ataaagttggtaaataacatgaaacagaaataaattattaa 13538917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 23227277 - 23227405
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||| |||| ||||||||||| |  ||| |||||||||||  ||||||||||   ||| ||||  | ||||||| ||  ||||||||||||| |||| |     
T  23227277 cctctggtcatatttataagaaatatttaggtcaacaaaatgtgatgtatctgactaagaatttggaccaaatacatcaacttttgttgaccaaaatgtc 23227376  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||||  ||||| |||||||    
T  23227377 tcttataaataggactgaaggaagtatta 23227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 23227391 - 23227348
Alignment:
Q  7 gtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    |||||||||||||||||  ||| |||||||||||||||||||||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtat 23227348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 36688977 - 36688894
Alignment:
Q  31 gtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatagga 114  Q
    |||||||||| ||||||||||| ||| ||||||||| | | ||| ||  || |||||||||| || ||| ||||||||||||||    
T  36688977 gtcaacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaatagga 36688894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 10069237 - 10069323
Alignment:
Q  26 tttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaatag 112  Q
    |||| ||||| ||||||| |||||||| |||||||| |  | | | ||| ||| |||||||||||||||||| ||||||| ||||||    
T  10069237 tttgagtcaataaaagtttatgtatctggttaaaaaattggactagatacattaacttttgttgacctaaatatttcttaaaaatag 10069323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 231
Target Start/End: Complemental strand, 13538909 - 13538875
Alignment:
Q  197 aacatgaaacagaaatagatgattaacttagagac 231  Q
    |||||||||||||||||||||||||||| ||||||    
T  13538909 aacatgaaacagaaatagatgattaactaagagac 13538875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 129
Target Start/End: Complemental strand, 14740550 - 14740464
Alignment:
Q  43 tgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    |||||||||| ||||||||||  | | ||||| |||  |||||||||||  |||| | ||||||| ||||||||||||| |||||||    
T  14740550 tgatgtatctggttaaaaatttggacgaaatacattaccttttgttgacacaaatatctcttatatataggatcgaagggagtatta 14740464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 20900678 - 20900720
Alignment:
Q  10 ctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    ||||||||||||||  ||||||||| |||||||||||||||||    
T  20900678 ctatttataagagacatttgggtcagcaaaagttgatgtatct 20900720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 36688892 - 36688938
Alignment:
Q  6 ggtcctatttataagagaattttgggtcaacaaaagttgatgtatct 52  Q
    |||||||||||||||||||  || |||||||||| ||||||||||||    
T  36688892 ggtcctatttataagagaaagtttggtcaacaaacgttgatgtatct 36688938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 41492942 - 41492892
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtattaa 130  Q
    ||||||||||||| |||||| |||||||||||||| || ||| ||||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtattaa 41492892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 15372231 - 15372272
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    ||||| |||||||||||||||||| ||| |||||||||||||    
T  15372231 cctccagtcctatttataagagaaatttaggtcaacaaaagt 15372272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6648644 - 6648608
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaaca 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  6648644 cctccggtcctatttataagagaaatttaggtcaaca 6648608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 11582647 - 11582699
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    ||||||||| ||  ||||| ||||||||||||||||| |||||||| ||||||    
T  11582647 tatttataaaagggttttgagtcaacaaaagttgatgaatctagttcaaaatt 11582699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 15243990 - 15244034
Alignment:
Q  11 tatttataagagaattttgggtcaacaaaagttgatgtatctagt 55  Q
    |||||||||||||  ||||  ||||||||||||||||||||||||    
T  15243990 tatttataagagatatttgaatcaacaaaagttgatgtatctagt 15244034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 15271173 - 15271117
Alignment:
Q  7 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    |||||||||||||||||  ||||||| |||||||||| | |||| ||||| ||||||    
T  15271173 gtcctatttataagagatgtttgggtgaacaaaagttaaagtatgtagttcaaaatt 15271117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 16243907 - 16243867
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||| || ||| |||||||||||||    
T  16243907 ctccggtcctatttataagaaaaatttaggtcaacaaaagt 16243867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 31150659 - 31150707
Alignment:
Q  2 ctccggtcctatttataagagaattttgggtcaacaaaagttgatgtat 50  Q
    ||||| |||||||||||||||||  ||| ||||||||||||| ||||||    
T  31150659 ctccgatcctatttataagagaaagttgcgtcaacaaaagtttatgtat 31150707  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 44425084 - 44425028
Alignment:
Q  7 gtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaatt 63  Q
    |||||||| ||||||||  ||||  |||||||||||| |||||||||||| ||||||    
T  44425084 gtcctattaataagagatatttgaatcaacaaaagtttatgtatctagttcaaaatt 44425028  T

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Target: scaffold0204 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23910 - 23782
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  23910 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 23811  T
Q  101 tcttataaataggatcgaaggtagtatta 129  Q
    |||||||||||||| || |||||||||||    
T  23810 tcttataaataggaccggaggtagtatta 23782  T

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Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23790 - 23831
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  23790 cctccggtcctatttataagagaaatttaggtcaacaaaagt 23831  T

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Target: scaffold0204; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 23869 - 23918
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||| ||| ||||||||||||||||| || ||| |||||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagtatta 23918  T

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Target: scaffold0482 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 12985 - 12858
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||     
T  12985 cctccggtcctatttataagagaattttgggtcagcaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 12886  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  12885 tcttataaataggaccggaggtagtatt 12858  T

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Target: scaffold0482; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12865 - 12906
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  12865 cctccggtcctatttataagagaaatttaggtcaacaaaagt 12906  T

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Target: scaffold0009 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 49630 - 49503
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||     
T  49630 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttc 49531  T
Q  101 tcttataaataggatcgaaggtagtatt 128  Q
    |||||||||||||| || ||||||||||    
T  49530 tcttataaataggaccggaggtagtatt 49503  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49510 - 49551
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  49510 cctccggtcctatttataagagaaatttaggtcaacaaaagt 49551  T

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Target: scaffold0464 (Bit Score: 102; Significance: 2e-50; HSPs: 3)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 6136 - 6261
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||     
T  6136 cctccggtcctatttataagaaaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttc 6235  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||||||||| || ||||||||    
T  6236 tcttataaataggaccggaggtagta 6261  T

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Target: scaffold0464; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6256 - 6215
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||||| ||| |||||||||||||    
T  6256 cctccggtcctatttataagagaaatttaggtcaacaaaagt 6215  T

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Target: scaffold0464; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 129
Target Start/End: Complemental strand, 6177 - 6128
Alignment:
Q  80 acttttgttgacctaaatttttcttataaataggatcgaaggtagtatta 129  Q
    ||||||||||||| ||| ||||||||||||||||| || ||| |||||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagtatta 6128  T

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Target: scaffold1707 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 1453 - 1334
Alignment:
Q  8 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttttcttata 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  1453 tcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 1354  T
Q  108 aataggatcgaaggtagtat 127  Q
    ||||||| || | |||||||    
T  1353 aataggaccggatgtagtat 1334  T

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Target: scaffold1707; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 1342 - 1381
Alignment:
Q  3 tccggtcctatttataagagaattttgggtcaacaaaagt 42  Q
    |||||||||||||||||||||| ||| |||||||||||||    
T  1342 tccggtcctatttataagagaaatttaggtcaacaaaagt 1381  T

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Target: scaffold0011 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 231308 - 231433
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatttt 100  Q
    |||||||||||||||||| |||||| || ||||||||||||||||| || |||||| ||||||||||||| ||| ||  ||||||||||| | || |||     
T  231308 cctccggtcctatttataggagaatattaggtcaacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttc 231407  T
Q  101 tcttataaataggatcgaaggtagta 126  Q
    |||||||| |||||||| ||| ||||    
T  231408 tcttataattaggatcggagggagta 231433  T

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Target: scaffold0415 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13736 - 13857
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagtt--gatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaatt 98  Q
    ||||||||||||||||||||||      || ||||||||||||  ||||||| |||||||||||||||| |||||||||| | |||||||||||||||||    
T  13736 cctccggtcctatttataagag------ggatcaacaaaagttttgatgtat-tagttaaaaattcagttcaaatatattaatttttgttgacctaaatt 13828  T
Q  99 tttcttataaataggatcgaaggtagtat 127  Q
    | |||||||| |||||  ||||| |||||    
T  13829 tctcttataagtaggactgaagggagtat 13857  T

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Target: scaffold0650 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 1 - 81
Alignment:
Q  12 atttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacc 92  Q
    |||||||||||||  | | |||||||||||||||||||| | |||||||||| |||||||||| ||  |||||||||||||    
T  1 atttataagagaaagtcgagtcaacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgacc 81  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 312843 - 312747
Alignment:
Q  1 cctccggtcctatttataagagaattttgggtcaacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgacctaaat 97  Q
    ||||||||  |||||| |||||| |||| | ||||||||| ||||||||||||||| ||||||  |  || ||| ||| ||||||||||||| ||||    
T  312843 cctccggttttatttaaaagagactttttgatcaacaaaaattgatgtatctagtttaaaatttggatcagatacattaacttttgttgaccaaaat 312747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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