View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16165_high_23 (Length: 232)

Name: NF16165_high_23
Description: NF16165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16165_high_23
NF16165_high_23
[»] chr5 (6 HSPs)
chr5 (1-222)||(7452943-7453161)
chr5 (1-79)||(18593597-18593675)
chr5 (1-78)||(698722-698799)
chr5 (1-78)||(18313303-18313380)
chr5 (1-79)||(29087833-29087904)
chr5 (1-78)||(34378454-34378531)
[»] chr8 (16 HSPs)
chr8 (1-74)||(16457128-16457201)
chr8 (1-78)||(9519861-9519938)
chr8 (1-78)||(12897925-12898002)
chr8 (1-78)||(22773976-22774053)
chr8 (1-79)||(15821025-15821102)
chr8 (1-78)||(20138781-20138858)
chr8 (1-78)||(31207011-31207088)
chr8 (1-78)||(32065934-32066011)
chr8 (18-79)||(9659474-9659535)
chr8 (1-75)||(35815896-35815970)
chr8 (5-78)||(24995044-24995117)
chr8 (1-78)||(36631178-36631254)
chr8 (1-74)||(37986508-37986581)
chr8 (1-47)||(27889201-27889247)
chr8 (1-47)||(27947859-27947905)
chr8 (1-77)||(35821610-35821685)
[»] chr1 (10 HSPs)
chr1 (1-78)||(30685573-30685650)
chr1 (1-79)||(31584688-31584765)
chr1 (1-71)||(46814121-46814191)
chr1 (1-78)||(7002542-7002619)
chr1 (1-78)||(40216155-40216232)
chr1 (1-79)||(24449579-24449656)
chr1 (1-79)||(41920812-41920890)
chr1 (1-78)||(6804893-6804969)
chr1 (1-79)||(24684141-24684218)
chr1 (1-78)||(14320678-14320755)
[»] chr7 (21 HSPs)
chr7 (1-79)||(31971783-31971861)
chr7 (1-79)||(5859931-5860009)
chr7 (1-78)||(10244535-10244612)
chr7 (1-77)||(3867470-3867545)
chr7 (1-79)||(42454382-42454460)
chr7 (1-78)||(44353213-44353290)
chr7 (1-78)||(47325534-47325611)
chr7 (2-78)||(3419048-3419124)
chr7 (10-78)||(33434480-33434548)
chr7 (9-76)||(37795359-37795426)
chr7 (9-76)||(37795687-37795754)
chr7 (16-78)||(40726140-40726202)
chr7 (1-78)||(6585241-6585318)
chr7 (1-78)||(25161163-25161240)
chr7 (1-78)||(34391537-34391614)
chr7 (1-78)||(48161690-48161766)
chr7 (1-76)||(11378772-11378846)
chr7 (2-64)||(3419321-3419383)
chr7 (4-78)||(35745481-35745555)
chr7 (1-39)||(38306615-38306653)
chr7 (1-77)||(41089396-41089469)
[»] chr3 (19 HSPs)
chr3 (1-79)||(47236053-47236131)
chr3 (1-78)||(2392152-2392229)
chr3 (1-78)||(2393915-2393992)
chr3 (1-78)||(19176861-19176938)
chr3 (1-78)||(21343702-21343779)
chr3 (1-78)||(45164208-45164285)
chr3 (1-78)||(53248255-53248332)
chr3 (1-72)||(40023224-40023295)
chr3 (1-79)||(31483235-31483313)
chr3 (1-79)||(34475406-34475484)
chr3 (1-78)||(23327997-23328074)
chr3 (1-48)||(30352118-30352165)
chr3 (1-76)||(37158661-37158735)
chr3 (15-78)||(47439284-47439347)
chr3 (1-79)||(50305222-50305300)
chr3 (1-71)||(17551312-17551382)
chr3 (1-51)||(43012732-43012782)
chr3 (1-78)||(4463734-4463811)
chr3 (1-78)||(25506719-25506796)
[»] chr6 (5 HSPs)
chr6 (1-78)||(3254312-3254389)
chr6 (1-74)||(3117849-3117922)
chr6 (1-78)||(15944354-15944431)
chr6 (5-73)||(14663414-14663480)
chr6 (1-79)||(15132488-15132566)
[»] chr4 (12 HSPs)
chr4 (1-79)||(2826136-2826214)
chr4 (1-79)||(35329362-35329440)
chr4 (1-78)||(46698428-46698505)
chr4 (1-74)||(49528441-49528514)
chr4 (12-79)||(30964803-30964870)
chr4 (1-78)||(27555579-27555657)
chr4 (1-78)||(7703042-7703118)
chr4 (1-78)||(8705789-8705866)
chr4 (1-78)||(9750122-9750198)
chr4 (12-78)||(30167212-30167278)
chr4 (1-79)||(4306060-4306137)
chr4 (1-72)||(35341006-35341079)
[»] chr2 (10 HSPs)
chr2 (1-78)||(14436916-14436993)
chr2 (1-77)||(15457817-15457893)
chr2 (1-79)||(3745696-3745774)
chr2 (1-79)||(5254608-5254685)
chr2 (1-78)||(10524453-10524529)
chr2 (1-78)||(14405554-14405630)
chr2 (1-79)||(43816095-43816173)
chr2 (1-78)||(387531-387608)
chr2 (1-62)||(17116553-17116614)
chr2 (1-78)||(39338510-39338587)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-77)||(19273-19349)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-72)||(6060-6131)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-47)||(2353-2399)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-78)||(48690-48767)
[»] scaffold0068 (1 HSPs)
scaffold0068 (26-79)||(35472-35525)


Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7452943 - 7453161
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattcnnnnnnnnnnnnntacatttt 100  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||| |||||||||||||              ||||||||    
T  7452943 atatgcggcaccatttgtatcttgatttgtccataccttgcgtcttgcatggatgatgtttaataatatttgccgatt---aaaaaaaaacatacatttt 7453039  T
Q  101 gtttttctacatctttccaagtccaacactttattttctccttattcctctctttctataacatcatcaaactattacattacatgtatcatttcactct 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7453040 gtttttctacatctttccaaatccaacactttattttctccttattcctctctttctataacatcatcaaactattacattacatgtatcatatcactct 7453139  T
Q  201 ttgttctctttgttttcctttg 222  Q
    ||||||||||||||||||||||    
T  7453140 ttgttctctttgttttcctttg 7453161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18593597 - 18593675
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||| | ||||||| |||| ||||||||| | |||||| ||||||| ||||||| ||||||||||||||    
T  18593597 atatgcggcaccatatttatcttgtttcgtccataccttgcatcttgcggggatgacgtttaataatatttgccgattc 18593675  T

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Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 698722 - 698799
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||||||| |  |||  |||||||||||||||||||| ||||  ||||||| |||||||| ||||    
T  698722 atatgcggcaccatttgtatcatatttcatccataccttacgtcttgcagagatgtcgtttaataatatttgctgatt 698799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18313380 - 18313303
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||| |||||| |||  ||||||||| |||||| |||| |||| ||||||| |||||| ||||||    
T  18313380 atatgcggcaccatttgcatcttgtttcatccataccttgcgtcttacaggaatgacgtttaataatatttaccgatt 18313303  T

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Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29087833 - 29087904
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||||       ||||||||||||| ||||||| |||||| |||||||    
T  29087833 atatgcggcaccatttgtatcttgtttcgtccatac-------cttgcagggatgacgtttaataatattttccgattc 29087904  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34378454 - 34378531
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||| |  ||| |||| |||| |||||||| | ||||  ||||||| ||||||| |||||    
T  34378454 atatgcggcaccatttgtatctcgtctcgtccatgccttgcgtcttgcggagatggcgtttaataatatttgtcgatt 34378531  T

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Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16457201 - 16457128
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  16457201 atatgtggcaccatttgtatcttgtttcgtccataccttacgtcttgcagggatgacgtttaataatatttgcc 16457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9519861 - 9519938
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| |||||||| ||||||| |||||    
T  9519861 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgtagggatggtgtttaataatatttgtcgatt 9519938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12898002 - 12897925
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||| ||| | |||||| ||||||| ||||||| |||||||||||||    
T  12898002 atatgcggcaccatttgtatcttgtttcgtccatatcttgcatcttgcggggatgacgtttaataatatttgccgatt 12897925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22773976 - 22774053
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||  ||||||| |||||||||||||    
T  22773976 atatgcggcaccatttgtatctagtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccgatt 22774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15821102 - 15821025
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| | || ||||||||| ||||||||| |||||| ||||||| |||||||| |||||    
T  15821102 atatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgca-ggatgacgtttaataatatttgctgattc 15821025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20138781 - 20138858
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||  ||||||| |||||| ||||||    
T  20138781 atatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccgatt 20138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31207088 - 31207011
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||||||||  |||||  ||||||| |||||||||||||    
T  31207088 atatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcgaggatggcgtttaataatatttgccgatt 31207011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32066011 - 32065934
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||| | ||||  ||||||| |||||||||||||    
T  32066011 atatgcggcaccatttgtatcttgtttcgtccataccttgcatcttgcggtgatggcgtttaataatatttgccgatt 32065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 9659474 - 9659535
Alignment:
Q  18 tatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  9659474 tatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgattc 9659535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35815970 - 35815896
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 75  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||| ||||  |||||  ||||||| ||||||||||    
T  35815970 atatgtggcaccatttgtatcttgtttcgtccataccttgcgttttgcgaggatggcgtttaataatatttgccg 35815896  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24995117 - 24995044
Alignment:
Q  5 gcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||| |||| ||||||||| |||||| | ||||||  ||| ||| |||||||| ||||    
T  24995117 gcggcaccatttgtatcttgtttcgtccataccttgcgtcttacggggatggcgttcaataatatttgctgatt 24995044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36631178 - 36631254
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||||||||  || |||| |||||| ||||||    
T  36631178 atatgcggcaccatttgtatcttgtttc-ttcataccttgcgtcttgcagggatggcgtataataatattttccgatt 36631254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37986581 - 37986508
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    |||||| ||||||||||||||||| |||| || | |||| |||||||| |||||||  |||||| |||||||||    
T  37986581 atatgcagcaccatttgtatcttgtttcgtccgtgccttgcgtcttgcggggatgacatttaataatatttgcc 37986508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27889201 - 27889247
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttg 47  Q
    |||||||||||||||||||||||| |||| | ||||||| |||||||    
T  27889201 atatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27889247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27947859 - 27947905
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttg 47  Q
    |||||||||||||||||||||||| |||| | ||||||| |||||||    
T  27947859 atatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27947905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35821610 - 35821685
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    |||||||||| |||||||||| || |||| |||| |||| |||||||| | ||||  ||||||| ||||||||||||    
T  35821610 atatgcggcatcatttgtatcatgtttcgtccat-ccttgcgtcttgcggagatggcgtttaataatatttgccgat 35821685  T

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Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30685650 - 30685573
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||||||||||    
T  30685650 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 30685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31584765 - 31584688
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||||  ||||| |||||||| ||||||||||||||    
T  31584765 atatgcggcaccatttgtatcttgtttcgtc-ataccttgcgtcttgcgaggatggtgtttaataatatttgccgattc 31584688  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46814191 - 46814121
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 71  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||  |||||  ||||||| ||||||    
T  46814191 atatgcggcaccatttgtatcttgtttcgtccataccttacgtcttgcgaggatggcgtttaataatattt 46814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7002542 - 7002619
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||| ||||||||||| |||| ||||||||||| | ||||  |||||| ||||||| |||||||||||||    
T  7002542 atatgcggcaccttttgtatcttgtttcgtccataccttacattttgcgaggatgacgtttaataatatttgccgatt 7002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40216232 - 40216155
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||||||||||||||| ||||| ||  ||||||||  |||||| ||||||| |||||||| ||||    
T  40216232 atatgcggcaccatttgtatcttgattcgtccatatctggcgtcttgcgaggatgacgtttaataatatttgctgatt 40216155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24449656 - 24449579
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| |||| ||||||||| | |||||| ||||||  ||||||| ||||||||| ||||    
T  24449656 atatgcagcaccatttgtatcttgtttcgtccataccttgcatcttgc-gggatggcgtttaataatatttgccaattc 24449579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41920812 - 41920890
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| |||| |||||||| ||  |||| |||||||||||||||||| | ||||| ||||||| ||||||| ||||||    
T  41920812 atatgcagcacaatttgtattttatttcgtccataccttacgtcttgcggagatgacgtttaataatatttgtcgattc 41920890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6804893 - 6804969
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||  |||| ||||||||| |||||||| |||||   ||||||| |||||| ||||||    
T  6804893 atatgcggcaccatttgtatctt-tttcgtccataccttgcgtcttgcggggatagcgtttaataatatttaccgatt 6804969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24684218 - 24684141
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||| |||||||||||||||||| || |  |||||||| | ||||||||||||||  | |||| ||||||||||||||    
T  24684218 atatgtggcaccatttgtatcttgttt-gttcataccttgcatcttgcagggatgacatataataatatttgccgattc 24684141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14320678 - 14320755
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||| |||||||||||| | | || | ||||||||| | |||||  ||||||| ||||||| |||||||||||||    
T  14320678 atatgcgacaccatttgtatttggttttgtccataccttgcatcttgtggggatgacgtttaataatatttgccgatt 14320755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31971861 - 31971783
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||  ||||||| ||||||||||||||    
T  31971861 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccgattc 31971783  T

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Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5860009 - 5859931
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| ||||||| ||||||||||||||    
T  5860009 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaataatatttgccgattc 5859931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10244535 - 10244612
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| | ||||  ||||||| |||||||||||||    
T  10244535 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggagatggagtttaataatatttgccgatt 10244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3867470 - 3867545
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    ||||| |||||||||||||||||| |||| | |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  3867470 atatgtggcaccatttgtatcttgtttcgtcaataccttacgtcttgc-gggatgaagtttaataatatttgccgat 3867545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42454460 - 42454382
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||||||||||||||| |||| |||| | ||| ||| |||||||| ||||||||||||||| |||||||| |||||    
T  42454460 atatgcggcaccatttgtaccttgtttcgtctatatcttgcgtcttgcggggatgatgtttaataatatttgctgattc 42454382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44353290 - 44353213
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||  ||||||| |||||| ||||||    
T  44353290 atatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccgatt 44353213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47325611 - 47325534
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| ||||||||||||||||| |||| ||||||||| |||||| |  |||||| ||||||| |||||||||||||    
T  47325611 atatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttacgaggatgacgtttaataatatttgccgatt 47325534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 3419124 - 3419048
Alignment:
Q  2 tatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||| | ||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||| |||||    
T  3419124 tatgcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgtcgatt 3419048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 33434548 - 33434480
Alignment:
Q  10 accatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||| |||| ||||||||| ||| |||| ||||||  ||||||| |||||||||||||    
T  33434548 accatttgtatcttgcttcgtccataccttgcgtattgcggggatggcgtttaataatatttgccgatt 33434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37795359 - 37795426
Alignment:
Q  9 caccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    |||||||||||||||| |||| ||||||||| |||||||  |||| || ||||||| |||||||||||    
T  37795359 caccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccga 37795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37795687 - 37795754
Alignment:
Q  9 caccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    |||||||||||||||| |||| ||||||||| |||||||  |||| || ||||||| |||||||||||    
T  37795687 caccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccga 37795754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 40726202 - 40726140
Alignment:
Q  16 tgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||| |||| ||||||||| |||||||| |||||||  |||||| |||||||||||||    
T  40726202 tgtatcttgtttcgtccataccttgcgtcttgcggggatgacatttaataatatttgccgatt 40726140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6585241 - 6585318
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||| |||||||||||||||||| |||| |||| |||| | |||||| ||||||  ||||||| |||||||| ||||    
T  6585241 atatgtggcaccatttgtatcttgtttcgtccattccttgcatcttgcggggatggcgtttaataatatttgctgatt 6585318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25161163 - 25161240
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| |||||||||||| |||||| ||||  |||||||||  |||| | ||||||| ||||||| |||||||||||||    
T  25161163 atatacggcaccatttgcatcttgtttcgttcataccttaaatcttacggggatgacgtttaataatatttgccgatt 25161240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34391537 - 34391614
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||  |||||||||||| |||| ||||||| | |||| ||| ||||||| ||||||| |||||||| ||||    
T  34391537 atatgcggcattatttgtatcttgtttcgtccataccctgcgtcctgcggggatgacgtttaataatatttgctgatt 34391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48161766 - 48161690
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||| |||||||| ||| |||| ||||| |||  ||||||||||||||| ||||||| |||||||| ||||    
T  48161766 atatgcggcactatttgtattttg-ttcgtccatatcttgtgtcttgcagggatgacgtttaataatatttgctgatt 48161690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11378846 - 11378772
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    |||||||||| ||| |||||||| ||||| ||||||||| |||||||| ||| ||  ||||||| |||||||||||    
T  11378846 atatgcggcatcatctgtatctt-attcgtccataccttgcgtcttgcggggttggcgtttaataatatttgccga 11378772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 3419383 - 3419321
Alignment:
Q  2 tatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaat 64  Q
    ||||||||| | ||||||||||| |||| ||||||||| |||||||| ||||||  |||||||    
T  3419383 tatgcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaat 3419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 35745555 - 35745481
Alignment:
Q  4 tgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| |||||||||||||||| |||| ||||||||| ||| || | | ||||| ||||||| |||||||| ||||    
T  35745555 tgcgacaccatttgtatcttgtttcgtccataccttgcgttttacggagatgacgtttaataatatttgctgatt 35745481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38306615 - 38306653
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccatacctt 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  38306615 atatgcggcaccatttgtatcttgtttcgtccatacctt 38306653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41089469 - 41089396
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    ||||||||||||||| |||||||| |||| |||||||||  ||||||||| ||||   |||||| ||||||||||||    
T  41089469 atatgcggcaccatt-gtatcttgtttcgtccatacctt--gtcttgcagagatggcatttaataatatttgccgat 41089396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47236053 - 47236131
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||  ||||||| |||||||| |||||    
T  47236053 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcagggatggcgtttaataatatttgctgattc 47236131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2392229 - 2392152
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||| ||||||    
T  2392229 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccgatt 2392152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2393992 - 2393915
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||| ||||||    
T  2393992 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccgatt 2393915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19176861 - 19176938
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||||||| || |||| |||||| || ||||||||||| |||| ||||||| |||||||||||||    
T  19176861 atatgcggcaccatttgtatcatgtttcgtccatactttgcgtcttgcaggaatgacgtttaataatatttgccgatt 19176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21343702 - 21343779
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||||||  ||||||| ||||||| ||||||| ||||||| |||||    
T  21343702 atatgcggcaccatttgtatcttgtttcgtccataccttgtgtcttgccgggatgacgtttaataatatttgtcgatt 21343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45164208 - 45164285
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| || | ||||||||| | |||||| ||||| ||||||||| |||||||||||||    
T  45164208 atatgcggcaccatttgtatcttgtttagtccataccttgcatcttgcggggataatgtttaataatatttgccgatt 45164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 53248255 - 53248332
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||| |||||||||||||||| || | |||||||||||| ||||| ||||||| ||||||| ||||||| |||||    
T  53248255 atatgcgacaccatttgtatcttgttttgtccataccttacgccttgcggggatgacgtttaataatatttgtcgatt 53248332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40023295 - 40023224
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 72  Q
    |||||||||| ||||||||||||| |||| ||||||  | |||||||| ||||||||||||||| |||||||    
T  40023295 atatgcggcatcatttgtatcttgtttcgtccatacaatgcgtcttgcggggatgatgtttaataatatttg 40023224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31483235 - 31483313
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| || |  |||||||| |||||||  |||||| |||||||| ||||||||||||||    
T  31483235 atatgcagcaccatttgtatcttgttttgttcataccttgcgtcttgtggggatggtgtttaataatatttgccgattc 31483313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34475484 - 34475406
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||| |||||||||||||||||| ||||  |||||| | |||||||| ||||||| ||||||| |||| |||||||||    
T  34475484 atatggggcaccatttgtatcttgtttcgttcataccctgcgtcttgcggggatgacgtttaataatatgtgccgattc 34475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23328074 - 23327997
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||| ||||||| |||| ||||||||| ||| ||||||||||   ||||||| |||||||| ||||    
T  23328074 atatgcggcaccatttatatcttgtttcgtccataccttgcgtattgcagggatagcgtttaataatatttgctgatt 23327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30352165 - 30352118
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgc 48  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  30352165 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgc 30352118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37158661 - 37158735
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    ||||||||||||||||||||| || |||| ||||||||| |||||||| ||||||  |||| || |||||||||||    
T  37158661 atatgcggcaccatttgtatcctgtttcgtccataccttgcgtcttgcggggatggcgttt-ataatatttgccga 37158735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 47439284 - 47439347
Alignment:
Q  15 ttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||| |||| |||||||||| |||||| |||||||| ||||| | |||||||||||||    
T  47439284 ttgtatcttgtttcgtccataccttatgtcttgtagggatgacgtttagtaatatttgccgatt 47439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50305300 - 50305222
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||| |||||||||||||||| | || ||||||||| |||||||| || |||  ||||||| |||||||| |||||    
T  50305300 atatgcgacaccatttgtatcttgttccgtccataccttgcgtcttgcgggaatggcgtttaataatatttgctgattc 50305222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17551312 - 17551382
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 71  Q
    |||||||||||||||||||| ||| ||||  |||||| | | |||||||||||| | ||||||| ||||||    
T  17551312 atatgcggcaccatttgtattttgtttcgttcataccctgcatcttgcagggataacgtttaataatattt 17551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43012732 - 43012782
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagg 51  Q
    |||||||||||||||||||| ||| ||||  |||||||| |||||||||||    
T  43012732 atatgcggcaccatttgtatattgtttcgttcataccttgcgtcttgcagg 43012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4463811 - 4463734
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||| | ||| |||| ||||  ||| |||||||  ||| ||| ||||||| |||||||||||||    
T  4463811 atatgcggcaccatttgtgtgttgtttcgtccatgtcttgcgtcttgtggggttgacgtttaataatatttgccgatt 4463734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25506796 - 25506719
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||| ||| || |   ||| |||  ||||||| ||||||||||||||| ||||||| |||||    
T  25506796 atatgcggcaccatttgtatattgttttgtttatatcttgggtcttgcggggatgatgtttaataatatttgtcgatt 25506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3254312 - 3254389
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| ||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||||||||||    
T  3254312 atatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 3254389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3117849 - 3117922
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    |||||| ||||||||||||||||  |||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  3117849 atatgctgcaccatttgtatcttatttcgtccataccttacgtcttgcaggaatgacgtttaataatatttgcc 3117922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15944354 - 15944431
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||| |||||||||||||||  |  | ||||||||| |||||| ||||||||  ||||||| |||||||||||||    
T  15944354 atatgcgacaccatttgtatcttcttctgtccataccttgcgtcttacagggatggcgtttaataatatttgccgatt 15944431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 14663414 - 14663480
Alignment:
Q  5 gcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgc 73  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||| |||||| ||||||| ||||||||    
T  14663414 gcggcagcatttgtatcttg-ttcgtccatacctttcgtcttgca-ggatgacgtttaataatatttgc 14663480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15132566 - 15132488
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||| ||||| ||||||||||||| || | ||||||||||||||||||   ||||  ||||||| |||||||| |||||    
T  15132566 atatacggcatcatttgtatcttgttttgtccataccttacgtcttgcgatgatggcgtttaataatatttgctgattc 15132488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2826136 - 2826214
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| | || ||||||||| |||||||||| ||||| ||||||| |||||||| |||||    
T  2826136 atatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgcagagatgacgtttaataatatttgctgattc 2826214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35329362 - 35329440
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||  ||||| | ||||||||||||||    
T  35329362 atatgcagcaccatttgtatcttgtttcgtccataccttacgtcttgcggggatggcgtttactaatatttgccgattc 35329440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46698505 - 46698428
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||| || |||||| ||||||| |||||||| ||||    
T  46698505 atatgcggcaccatttgtatcttgtttcgaccataccttgcgtctttcatggatgacgtttaataatatttgctgatt 46698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 49528441 - 49528514
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    |||||||||||||||||||||||| |||| |||||||||| || |||| ||| || ||||||||||||||||||    
T  49528441 atatgcggcaccatttgtatcttgtttcgtccataccttatgttttgcggggttggtgtttaatgatatttgcc 49528514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 30964803 - 30964870
Alignment:
Q  12 catttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  30964803 catttgtatcttgtttcgtccataccttgcgtcttgcagggatggtgtttaataatatttgtcgattc 30964870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27555657 - 27555579
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgc-agggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||| |||||||||||| |||| ||||||||| ||||||||  ||||||  ||||||| |||||||||||||    
T  27555657 atatgcggcacaatttgtatcttgtttcgtccataccttgcgtcttgcgggggatggcgtttaataatatttgccgatt 27555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7703042 - 7703118
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||  |||  |||||||||  ||||||| ||||||| ||||||| |||||||||||||    
T  7703042 atatgcggcaccatttgtatcttt-ttcatccataccttgtgtcttgcggggatgacgtttaataatatttgccgatt 7703118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8705866 - 8705789
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| |||||||||||||| ||  ||| ||||||||  ||||||| |||||||| ||||||| |||||||||||||    
T  8705866 atatgcagcaccatttgtatcctgcctcgtccatacctcgcgtcttgaagggatgacgtttaataatatttgccgatt 8705789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9750122 - 9750198
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||| ||| | |||||||| ||||||| ||||||| ||||||| |||||    
T  9750122 atatgcggcaccatttgtatcttgtttcgtccaaacc-tgcgtcttgcggggatgacgtttaataatatttgtcgatt 9750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 30167278 - 30167212
Alignment:
Q  12 catttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||| |||| ||||||||| ||||||||  |||||| ||||||| ||||||| |||||    
T  30167278 catttgtatcttgtttcgtccataccttgcgtcttgcgaggatgacgtttaataatatttgtcgatt 30167212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4306060 - 4306137
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||| ||||||  ||||  |||||||| |||||| | |||||||  |||||| ||||||||||||||    
T  4306060 atatgcggcaccatttatatcttt-ttcgttcataccttgcgtcttccggggatgacatttaataatatttgccgattc 4306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35341079 - 35341006
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgc--agggatgatgtttaatgatatttg 72  Q
    ||||| |||||||||||||||||| |||| |||||| || ||||||||   ||||||| ||||||| |||||||    
T  35341079 atatgtggcaccatttgtatcttgtttcgtccatacattgcgtcttgcggggggatgacgtttaataatatttg 35341006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14436993 - 14436916
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||  ||||||| |||||||| ||||    
T  14436993 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgctgatt 14436916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15457817 - 15457893
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    |||||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| |||||||  |||||||||||    
T  15457817 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaatattatttgccgat 15457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3745696 - 3745774
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| |||| ||||||||| ||||||   |||||||  |||||| ||||||||||||||    
T  3745696 atatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttatggggatgacatttaataatatttgccgattc 3745774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5254608 - 5254685
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||||  |||||| ||||||| |||||||| |||||    
T  5254608 atatgcggcaccatttgtatctat-ttcgtccataccttacgtcttgcgaggatgacgtttaataatatttgctgattc 5254685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10524453 - 10524529
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| ||||||||||||| ||| |||| ||||||||| |||||||||||| ||  ||||||| |||||||||||||    
T  10524453 atatgctgcaccatttgtatattgtttcgtccataccttgcgtcttgcaggg-tggcgtttaataatatttgccgatt 10524529  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14405554 - 14405630
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| ||||||||||||||||| ||||  |||||||||||||||||||| || | ||||||| |||||||| ||||    
T  14405554 atatgcagcaccatttgtatcttg-ttcgttcataccttacgtcttgcaggaataacgtttaataatatttgctgatt 14405630  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43816173 - 43816095
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||| ||||||||  ||| |||| ||||||||| ||| |||| || |||| ||||||| ||||||||||||||    
T  43816173 atatgcggcatcatttgtactttgtttcgtccataccttgcgttttgcgggaatgacgtttaataatatttgccgattc 43816095  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 387531 - 387608
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||| | || ||||| | ||||| ||||||| |||| || |||||    
T  387531 atatgcggcaccatttgtatcttgtttcgtccataccctgcgacttgcggtgatgacgtttaataatatctgtcgatt 387608  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17116614 - 17116553
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgttta 62  Q
    |||||||||| |||||||||||||  ||| ||||||||| |||||||| ||||||| |||||    
T  17116614 atatgcggcatcatttgtatcttgtctcgtccataccttgcgtcttgcggggatgacgttta 17116553  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39338587 - 39338510
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||| || |||||| |   ||||  ||||||| |||||||||||||    
T  39338587 atatgcggcaccatttgtatcttgtttcgtccatacattgcgtcttacgatgatggcgtttaataatatttgccgatt 39338510  T

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Target: scaffold0172 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19273 - 19349
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    |||||||||||||||||||||||| |||| ||||||| | ||||||||  |||||| ||||||| ||||||||||||    
T  19273 atatgcggcaccatttgtatcttgtttcgtccataccatgcgtcttgcgaggatgacgtttaataatatttgccgat 19349  T

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Target: scaffold0343 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6060 - 6131
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 72  Q
    |||| |||||||||||||||||||  |||  |||| ||| |||||||| ||||||| ||||||| |||||||    
T  6060 atatacggcaccatttgtatcttgtctcgttcatatcttgcgtcttgcggggatgacgtttaataatatttg 6131  T

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Target: scaffold0434 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2399 - 2353
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttg 47  Q
    |||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  2399 atatgcggcaccatctgtatcttgtttcgtccataccttgcgtcttg 2353  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48690 - 48767
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| || | ||||| |||  ||||||| |||| || ||| ||| |||||||| ||||    
T  48690 atatgcggcaccatttgtatcttgtttagtccatatcttgtgtcttgcggggaggacgttgaataatatttgcggatt 48767  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 35525 - 35472
Alignment:
Q  26 ttcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||| |||||||||||||||| | ||||||| ||| ||| ||||||||||||||    
T  35525 ttcgtccataccttacgtcttacggggatgacgttcaataatatttgccgattc 35472  T

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