View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16165_low_20 (Length: 279)
Name: NF16165_low_20
Description: NF16165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16165_low_20 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 9720392 - 9720480
Alignment:
| Q |
19 |
aatcaaaagtagtgccaacattaggggaccatatctttacacaatataaaactgtccattttcttatttctatttaccctacattttag |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
9720392 |
aatcaaaagtagtgccaacattaggggaccatatctttacacaatataaatctgtccattttcttatttttatttaccccacattttag |
9720480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University