View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16165_low_28 (Length: 232)

Name: NF16165_low_28
Description: NF16165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16165_low_28
NF16165_low_28
[»] chr5 (6 HSPs)
chr5 (1-222)||(7452943-7453161)
chr5 (1-79)||(18593597-18593675)
chr5 (1-78)||(698722-698799)
chr5 (1-78)||(18313303-18313380)
chr5 (1-79)||(29087833-29087904)
chr5 (1-78)||(34378454-34378531)
[»] chr8 (16 HSPs)
chr8 (1-74)||(16457128-16457201)
chr8 (1-78)||(9519861-9519938)
chr8 (1-78)||(12897925-12898002)
chr8 (1-78)||(22773976-22774053)
chr8 (1-79)||(15821025-15821102)
chr8 (1-78)||(20138781-20138858)
chr8 (1-78)||(31207011-31207088)
chr8 (1-78)||(32065934-32066011)
chr8 (18-79)||(9659474-9659535)
chr8 (1-75)||(35815896-35815970)
chr8 (5-78)||(24995044-24995117)
chr8 (1-78)||(36631178-36631254)
chr8 (1-74)||(37986508-37986581)
chr8 (1-47)||(27889201-27889247)
chr8 (1-47)||(27947859-27947905)
chr8 (1-77)||(35821610-35821685)
[»] chr1 (10 HSPs)
chr1 (1-78)||(30685573-30685650)
chr1 (1-79)||(31584688-31584765)
chr1 (1-71)||(46814121-46814191)
chr1 (1-78)||(7002542-7002619)
chr1 (1-78)||(40216155-40216232)
chr1 (1-79)||(24449579-24449656)
chr1 (1-79)||(41920812-41920890)
chr1 (1-78)||(6804893-6804969)
chr1 (1-79)||(24684141-24684218)
chr1 (1-78)||(14320678-14320755)
[»] chr7 (21 HSPs)
chr7 (1-79)||(31971783-31971861)
chr7 (1-79)||(5859931-5860009)
chr7 (1-78)||(10244535-10244612)
chr7 (1-77)||(3867470-3867545)
chr7 (1-79)||(42454382-42454460)
chr7 (1-78)||(44353213-44353290)
chr7 (1-78)||(47325534-47325611)
chr7 (2-78)||(3419048-3419124)
chr7 (10-78)||(33434480-33434548)
chr7 (9-76)||(37795359-37795426)
chr7 (9-76)||(37795687-37795754)
chr7 (16-78)||(40726140-40726202)
chr7 (1-78)||(6585241-6585318)
chr7 (1-78)||(25161163-25161240)
chr7 (1-78)||(34391537-34391614)
chr7 (1-78)||(48161690-48161766)
chr7 (1-76)||(11378772-11378846)
chr7 (2-64)||(3419321-3419383)
chr7 (4-78)||(35745481-35745555)
chr7 (1-39)||(38306615-38306653)
chr7 (1-77)||(41089396-41089469)
[»] chr3 (19 HSPs)
chr3 (1-79)||(47236053-47236131)
chr3 (1-78)||(2392152-2392229)
chr3 (1-78)||(2393915-2393992)
chr3 (1-78)||(19176861-19176938)
chr3 (1-78)||(21343702-21343779)
chr3 (1-78)||(45164208-45164285)
chr3 (1-78)||(53248255-53248332)
chr3 (1-72)||(40023224-40023295)
chr3 (1-79)||(31483235-31483313)
chr3 (1-79)||(34475406-34475484)
chr3 (1-78)||(23327997-23328074)
chr3 (1-48)||(30352118-30352165)
chr3 (1-76)||(37158661-37158735)
chr3 (15-78)||(47439284-47439347)
chr3 (1-79)||(50305222-50305300)
chr3 (1-71)||(17551312-17551382)
chr3 (1-51)||(43012732-43012782)
chr3 (1-78)||(4463734-4463811)
chr3 (1-78)||(25506719-25506796)
[»] chr6 (5 HSPs)
chr6 (1-78)||(3254312-3254389)
chr6 (1-74)||(3117849-3117922)
chr6 (1-78)||(15944354-15944431)
chr6 (5-73)||(14663414-14663480)
chr6 (1-79)||(15132488-15132566)
[»] chr4 (12 HSPs)
chr4 (1-79)||(2826136-2826214)
chr4 (1-79)||(35329362-35329440)
chr4 (1-78)||(46698428-46698505)
chr4 (1-74)||(49528441-49528514)
chr4 (12-79)||(30964803-30964870)
chr4 (1-78)||(27555579-27555657)
chr4 (1-78)||(7703042-7703118)
chr4 (1-78)||(8705789-8705866)
chr4 (1-78)||(9750122-9750198)
chr4 (12-78)||(30167212-30167278)
chr4 (1-79)||(4306060-4306137)
chr4 (1-72)||(35341006-35341079)
[»] chr2 (10 HSPs)
chr2 (1-78)||(14436916-14436993)
chr2 (1-77)||(15457817-15457893)
chr2 (1-79)||(3745696-3745774)
chr2 (1-79)||(5254608-5254685)
chr2 (1-78)||(10524453-10524529)
chr2 (1-78)||(14405554-14405630)
chr2 (1-79)||(43816095-43816173)
chr2 (1-78)||(387531-387608)
chr2 (1-62)||(17116553-17116614)
chr2 (1-78)||(39338510-39338587)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-77)||(19273-19349)
[»] scaffold0343 (1 HSPs)
scaffold0343 (1-72)||(6060-6131)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-47)||(2353-2399)
[»] scaffold0085 (1 HSPs)
scaffold0085 (1-78)||(48690-48767)
[»] scaffold0068 (1 HSPs)
scaffold0068 (26-79)||(35472-35525)


Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 7452943 - 7453161
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattcnnnnnnnnnnnnntacatttt 100  Q
    ||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||||||| |||||||||||||              ||||||||    
T  7452943 atatgcggcaccatttgtatcttgatttgtccataccttgcgtcttgcatggatgatgtttaataatatttgccgatt---aaaaaaaaacatacatttt 7453039  T
Q  101 gtttttctacatctttccaagtccaacactttattttctccttattcctctctttctataacatcatcaaactattacattacatgtatcatttcactct 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7453040 gtttttctacatctttccaaatccaacactttattttctccttattcctctctttctataacatcatcaaactattacattacatgtatcatatcactct 7453139  T
Q  201 ttgttctctttgttttcctttg 222  Q
    ||||||||||||||||||||||    
T  7453140 ttgttctctttgttttcctttg 7453161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 18593597 - 18593675
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||| | ||||||| |||| ||||||||| | |||||| ||||||| ||||||| ||||||||||||||    
T  18593597 atatgcggcaccatatttatcttgtttcgtccataccttgcatcttgcggggatgacgtttaataatatttgccgattc 18593675  T

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Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 698722 - 698799
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||||||| |  |||  |||||||||||||||||||| ||||  ||||||| |||||||| ||||    
T  698722 atatgcggcaccatttgtatcatatttcatccataccttacgtcttgcagagatgtcgtttaataatatttgctgatt 698799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 18313380 - 18313303
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||| |||||| |||  ||||||||| |||||| |||| |||| ||||||| |||||| ||||||    
T  18313380 atatgcggcaccatttgcatcttgtttcatccataccttgcgtcttacaggaatgacgtttaataatatttaccgatt 18313303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29087833 - 29087904
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||||       ||||||||||||| ||||||| |||||| |||||||    
T  29087833 atatgcggcaccatttgtatcttgtttcgtccatac-------cttgcagggatgacgtttaataatattttccgattc 29087904  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34378454 - 34378531
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||| |  ||| |||| |||| |||||||| | ||||  ||||||| ||||||| |||||    
T  34378454 atatgcggcaccatttgtatctcgtctcgtccatgccttgcgtcttgcggagatggcgtttaataatatttgtcgatt 34378531  T

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Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 16457201 - 16457128
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    ||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||    
T  16457201 atatgtggcaccatttgtatcttgtttcgtccataccttacgtcttgcagggatgacgtttaataatatttgcc 16457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9519861 - 9519938
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| |||||||| ||||||| |||||    
T  9519861 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgtagggatggtgtttaataatatttgtcgatt 9519938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12898002 - 12897925
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||| ||| | |||||| ||||||| ||||||| |||||||||||||    
T  12898002 atatgcggcaccatttgtatcttgtttcgtccatatcttgcatcttgcggggatgacgtttaataatatttgccgatt 12897925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22773976 - 22774053
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||| | |||| ||||||||| |||||||| ||||||  ||||||| |||||||||||||    
T  22773976 atatgcggcaccatttgtatctagtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccgatt 22774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15821102 - 15821025
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| | || ||||||||| ||||||||| |||||| ||||||| |||||||| |||||    
T  15821102 atatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgca-ggatgacgtttaataatatttgctgattc 15821025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20138781 - 20138858
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||  ||||||| |||||| ||||||    
T  20138781 atatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccgatt 20138858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31207088 - 31207011
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||||||||  |||||  ||||||| |||||||||||||    
T  31207088 atatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcgaggatggcgtttaataatatttgccgatt 31207011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32066011 - 32065934
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| | |||||| | ||||  ||||||| |||||||||||||    
T  32066011 atatgcggcaccatttgtatcttgtttcgtccataccttgcatcttgcggtgatggcgtttaataatatttgccgatt 32065934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 9659474 - 9659535
Alignment:
Q  18 tatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||||||||||    
T  9659474 tatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgattc 9659535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 35815970 - 35815896
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccg 75  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||| ||||  |||||  ||||||| ||||||||||    
T  35815970 atatgtggcaccatttgtatcttgtttcgtccataccttgcgttttgcgaggatggcgtttaataatatttgccg 35815896  T

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Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Complemental strand, 24995117 - 24995044
Alignment:
Q  5 gcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||| |||| ||||||||| |||||| | ||||||  ||| ||| |||||||| ||||    
T  24995117 gcggcaccatttgtatcttgtttcgtccataccttgcgtcttacggggatggcgttcaataatatttgctgatt 24995044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36631178 - 36631254
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||||||||  || |||| |||||| ||||||    
T  36631178 atatgcggcaccatttgtatcttgtttc-ttcataccttgcgtcttgcagggatggcgtataataatattttccgatt 36631254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 37986581 - 37986508
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    |||||| ||||||||||||||||| |||| || | |||| |||||||| |||||||  |||||| |||||||||    
T  37986581 atatgcagcaccatttgtatcttgtttcgtccgtgccttgcgtcttgcggggatgacatttaataatatttgcc 37986508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27889201 - 27889247
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttg 47  Q
    |||||||||||||||||||||||| |||| | ||||||| |||||||    
T  27889201 atatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27889247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27947859 - 27947905
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttg 47  Q
    |||||||||||||||||||||||| |||| | ||||||| |||||||    
T  27947859 atatgcggcaccatttgtatcttgtttcgtcaataccttgcgtcttg 27947905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 35821610 - 35821685
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    |||||||||| |||||||||| || |||| |||| |||| |||||||| | ||||  ||||||| ||||||||||||    
T  35821610 atatgcggcatcatttgtatcatgtttcgtccat-ccttgcgtcttgcggagatggcgtttaataatatttgccgat 35821685  T

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Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 30685650 - 30685573
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||||||||||    
T  30685650 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 30685573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31584765 - 31584688
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| | ||||||| ||||||||  ||||| |||||||| ||||||||||||||    
T  31584765 atatgcggcaccatttgtatcttgtttcgtc-ataccttgcgtcttgcgaggatggtgtttaataatatttgccgattc 31584688  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46814191 - 46814121
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 71  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||  |||||  ||||||| ||||||    
T  46814191 atatgcggcaccatttgtatcttgtttcgtccataccttacgtcttgcgaggatggcgtttaataatattt 46814121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7002542 - 7002619
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||| ||||||||||| |||| ||||||||||| | ||||  |||||| ||||||| |||||||||||||    
T  7002542 atatgcggcaccttttgtatcttgtttcgtccataccttacattttgcgaggatgacgtttaataatatttgccgatt 7002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 40216232 - 40216155
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||||||||||||||| ||||| ||  ||||||||  |||||| ||||||| |||||||| ||||    
T  40216232 atatgcggcaccatttgtatcttgattcgtccatatctggcgtcttgcgaggatgacgtttaataatatttgctgatt 40216155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24449656 - 24449579
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| |||| ||||||||| | |||||| ||||||  ||||||| ||||||||| ||||    
T  24449656 atatgcagcaccatttgtatcttgtttcgtccataccttgcatcttgc-gggatggcgtttaataatatttgccaattc 24449579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41920812 - 41920890
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| |||| |||||||| ||  |||| |||||||||||||||||| | ||||| ||||||| ||||||| ||||||    
T  41920812 atatgcagcacaatttgtattttatttcgtccataccttacgtcttgcggagatgacgtttaataatatttgtcgattc 41920890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6804893 - 6804969
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||  |||| ||||||||| |||||||| |||||   ||||||| |||||| ||||||    
T  6804893 atatgcggcaccatttgtatctt-tttcgtccataccttgcgtcttgcggggatagcgtttaataatatttaccgatt 6804969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24684218 - 24684141
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||| |||||||||||||||||| || |  |||||||| | ||||||||||||||  | |||| ||||||||||||||    
T  24684218 atatgtggcaccatttgtatcttgttt-gttcataccttgcatcttgcagggatgacatataataatatttgccgattc 24684141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14320678 - 14320755
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||| |||||||||||| | | || | ||||||||| | |||||  ||||||| ||||||| |||||||||||||    
T  14320678 atatgcgacaccatttgtatttggttttgtccataccttgcatcttgtggggatgacgtttaataatatttgccgatt 14320755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31971861 - 31971783
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||  ||||||| ||||||||||||||    
T  31971861 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgccgattc 31971783  T

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Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 5860009 - 5859931
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| ||||||| ||||||||||||||    
T  5860009 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaataatatttgccgattc 5859931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10244535 - 10244612
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| | ||||  ||||||| |||||||||||||    
T  10244535 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggagatggagtttaataatatttgccgatt 10244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3867470 - 3867545
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    ||||| |||||||||||||||||| |||| | |||||||||||||||| ||||||| ||||||| ||||||||||||    
T  3867470 atatgtggcaccatttgtatcttgtttcgtcaataccttacgtcttgc-gggatgaagtttaataatatttgccgat 3867545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42454460 - 42454382
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||||||||||||||| |||| |||| | ||| ||| |||||||| ||||||||||||||| |||||||| |||||    
T  42454460 atatgcggcaccatttgtaccttgtttcgtctatatcttgcgtcttgcggggatgatgtttaataatatttgctgattc 42454382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44353290 - 44353213
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||  ||||||| |||||| ||||||    
T  44353290 atatgcggcaccatttgtatcttgtttcgtccatactttgcgtcttgcggggatggcgtttaataatatttaccgatt 44353213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 47325611 - 47325534
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| ||||||||||||||||| |||| ||||||||| |||||| |  |||||| ||||||| |||||||||||||    
T  47325611 atatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttacgaggatgacgtttaataatatttgccgatt 47325534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 3419124 - 3419048
Alignment:
Q  2 tatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||| | ||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| ||||||| |||||    
T  3419124 tatgcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgtcgatt 3419048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 78
Target Start/End: Complemental strand, 33434548 - 33434480
Alignment:
Q  10 accatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||| |||| ||||||||| ||| |||| ||||||  ||||||| |||||||||||||    
T  33434548 accatttgtatcttgcttcgtccataccttgcgtattgcggggatggcgtttaataatatttgccgatt 33434480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37795359 - 37795426
Alignment:
Q  9 caccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    |||||||||||||||| |||| ||||||||| |||||||  |||| || ||||||| |||||||||||    
T  37795359 caccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccga 37795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 37795687 - 37795754
Alignment:
Q  9 caccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    |||||||||||||||| |||| ||||||||| |||||||  |||| || ||||||| |||||||||||    
T  37795687 caccatttgtatcttgtttcgtccataccttgcgtcttgtggggacgacgtttaataatatttgccga 37795754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 40726202 - 40726140
Alignment:
Q  16 tgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||| |||| ||||||||| |||||||| |||||||  |||||| |||||||||||||    
T  40726202 tgtatcttgtttcgtccataccttgcgtcttgcggggatgacatttaataatatttgccgatt 40726140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6585241 - 6585318
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||| |||||||||||||||||| |||| |||| |||| | |||||| ||||||  ||||||| |||||||| ||||    
T  6585241 atatgtggcaccatttgtatcttgtttcgtccattccttgcatcttgcggggatggcgtttaataatatttgctgatt 6585318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 25161163 - 25161240
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| |||||||||||| |||||| ||||  |||||||||  |||| | ||||||| ||||||| |||||||||||||    
T  25161163 atatacggcaccatttgcatcttgtttcgttcataccttaaatcttacggggatgacgtttaataatatttgccgatt 25161240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 34391537 - 34391614
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||  |||||||||||| |||| ||||||| | |||| ||| ||||||| ||||||| |||||||| ||||    
T  34391537 atatgcggcattatttgtatcttgtttcgtccataccctgcgtcctgcggggatgacgtttaataatatttgctgatt 34391614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48161766 - 48161690
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||| |||||||| ||| |||| ||||| |||  ||||||||||||||| ||||||| |||||||| ||||    
T  48161766 atatgcggcactatttgtattttg-ttcgtccatatcttgtgtcttgcagggatgacgtttaataatatttgctgatt 48161690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 11378846 - 11378772
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    |||||||||| ||| |||||||| ||||| ||||||||| |||||||| ||| ||  ||||||| |||||||||||    
T  11378846 atatgcggcatcatctgtatctt-attcgtccataccttgcgtcttgcggggttggcgtttaataatatttgccga 11378772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 3419383 - 3419321
Alignment:
Q  2 tatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaat 64  Q
    ||||||||| | ||||||||||| |||| ||||||||| |||||||| ||||||  |||||||    
T  3419383 tatgcggcaacgtttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaat 3419321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 35745555 - 35745481
Alignment:
Q  4 tgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| |||||||||||||||| |||| ||||||||| ||| || | | ||||| ||||||| |||||||| ||||    
T  35745555 tgcgacaccatttgtatcttgtttcgtccataccttgcgttttacggagatgacgtttaataatatttgctgatt 35745481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38306615 - 38306653
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccatacctt 39  Q
    |||||||||||||||||||||||| |||| |||||||||    
T  38306615 atatgcggcaccatttgtatcttgtttcgtccatacctt 38306653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 41089469 - 41089396
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    ||||||||||||||| |||||||| |||| |||||||||  ||||||||| ||||   |||||| ||||||||||||    
T  41089469 atatgcggcaccatt-gtatcttgtttcgtccatacctt--gtcttgcagagatggcatttaataatatttgccgat 41089396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47236053 - 47236131
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||  ||||||| |||||||| |||||    
T  47236053 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcagggatggcgtttaataatatttgctgattc 47236131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2392229 - 2392152
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||| ||||||    
T  2392229 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccgatt 2392152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 2393992 - 2393915
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||| ||||||    
T  2393992 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatattttccgatt 2393915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 19176861 - 19176938
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||||||||||| || |||| |||||| || ||||||||||| |||| ||||||| |||||||||||||    
T  19176861 atatgcggcaccatttgtatcatgtttcgtccatactttgcgtcttgcaggaatgacgtttaataatatttgccgatt 19176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21343702 - 21343779
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||||||  ||||||| ||||||| ||||||| ||||||| |||||    
T  21343702 atatgcggcaccatttgtatcttgtttcgtccataccttgtgtcttgccgggatgacgtttaataatatttgtcgatt 21343779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 45164208 - 45164285
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| || | ||||||||| | |||||| ||||| ||||||||| |||||||||||||    
T  45164208 atatgcggcaccatttgtatcttgtttagtccataccttgcatcttgcggggataatgtttaataatatttgccgatt 45164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 53248255 - 53248332
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||| |||||||||||||||| || | |||||||||||| ||||| ||||||| ||||||| ||||||| |||||    
T  53248255 atatgcgacaccatttgtatcttgttttgtccataccttacgccttgcggggatgacgtttaataatatttgtcgatt 53248332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 40023295 - 40023224
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 72  Q
    |||||||||| ||||||||||||| |||| ||||||  | |||||||| ||||||||||||||| |||||||    
T  40023295 atatgcggcatcatttgtatcttgtttcgtccatacaatgcgtcttgcggggatgatgtttaataatatttg 40023224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 31483235 - 31483313
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| || |  |||||||| |||||||  |||||| |||||||| ||||||||||||||    
T  31483235 atatgcagcaccatttgtatcttgttttgttcataccttgcgtcttgtggggatggtgtttaataatatttgccgattc 31483313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34475484 - 34475406
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||| |||||||||||||||||| ||||  |||||| | |||||||| ||||||| ||||||| |||| |||||||||    
T  34475484 atatggggcaccatttgtatcttgtttcgttcataccctgcgtcttgcggggatgacgtttaataatatgtgccgattc 34475406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23328074 - 23327997
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||| ||||||| |||| ||||||||| ||| ||||||||||   ||||||| |||||||| ||||    
T  23328074 atatgcggcaccatttatatcttgtttcgtccataccttgcgtattgcagggatagcgtttaataatatttgctgatt 23327997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 30352165 - 30352118
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgc 48  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||    
T  30352165 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgc 30352118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 37158661 - 37158735
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccga 76  Q
    ||||||||||||||||||||| || |||| ||||||||| |||||||| ||||||  |||| || |||||||||||    
T  37158661 atatgcggcaccatttgtatcctgtttcgtccataccttgcgtcttgcggggatggcgttt-ataatatttgccga 37158735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 47439284 - 47439347
Alignment:
Q  15 ttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||| |||| |||||||||| |||||| |||||||| ||||| | |||||||||||||    
T  47439284 ttgtatcttgtttcgtccataccttatgtcttgtagggatgacgtttagtaatatttgccgatt 47439347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 50305300 - 50305222
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||| |||||||||||||||| | || ||||||||| |||||||| || |||  ||||||| |||||||| |||||    
T  50305300 atatgcgacaccatttgtatcttgttccgtccataccttgcgtcttgcgggaatggcgtttaataatatttgctgattc 50305222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17551312 - 17551382
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatattt 71  Q
    |||||||||||||||||||| ||| ||||  |||||| | | |||||||||||| | ||||||| ||||||    
T  17551312 atatgcggcaccatttgtattttgtttcgttcataccctgcatcttgcagggataacgtttaataatattt 17551382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43012732 - 43012782
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagg 51  Q
    |||||||||||||||||||| ||| ||||  |||||||| |||||||||||    
T  43012732 atatgcggcaccatttgtatattgtttcgttcataccttgcgtcttgcagg 43012782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4463811 - 4463734
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||| | ||| |||| ||||  ||| |||||||  ||| ||| ||||||| |||||||||||||    
T  4463811 atatgcggcaccatttgtgtgttgtttcgtccatgtcttgcgtcttgtggggttgacgtttaataatatttgccgatt 4463734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 25506796 - 25506719
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||| ||| || |   ||| |||  ||||||| ||||||||||||||| ||||||| |||||    
T  25506796 atatgcggcaccatttgtatattgttttgtttatatcttgggtcttgcggggatgatgtttaataatatttgtcgatt 25506719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3254312 - 3254389
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||| ||||||||||||||||||| |||| ||||||||| |||||||| ||||||| ||||||| |||||||||||||    
T  3254312 atatacggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatgacgtttaataatatttgccgatt 3254389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3117849 - 3117922
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    |||||| ||||||||||||||||  |||| ||||||||||||||||||||| |||| ||||||| |||||||||    
T  3117849 atatgctgcaccatttgtatcttatttcgtccataccttacgtcttgcaggaatgacgtttaataatatttgcc 3117922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15944354 - 15944431
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||| |||||||||||||||  |  | ||||||||| |||||| ||||||||  ||||||| |||||||||||||    
T  15944354 atatgcgacaccatttgtatcttcttctgtccataccttgcgtcttacagggatggcgtttaataatatttgccgatt 15944431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 14663414 - 14663480
Alignment:
Q  5 gcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgc 73  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||| |||||| ||||||| ||||||||    
T  14663414 gcggcagcatttgtatcttg-ttcgtccatacctttcgtcttgca-ggatgacgtttaataatatttgc 14663480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 15132566 - 15132488
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||| ||||| ||||||||||||| || | ||||||||||||||||||   ||||  ||||||| |||||||| |||||    
T  15132566 atatacggcatcatttgtatcttgttttgtccataccttacgtcttgcgatgatggcgtttaataatatttgctgattc 15132488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 2826136 - 2826214
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||||||||||| | || ||||||||| |||||||||| ||||| ||||||| |||||||| |||||    
T  2826136 atatgcggcaccatttgtatcttgttccgtccataccttgcgtcttgcagagatgacgtttaataatatttgctgattc 2826214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35329362 - 35329440
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| |||| |||||||||||||||||| ||||||  ||||| | ||||||||||||||    
T  35329362 atatgcagcaccatttgtatcttgtttcgtccataccttacgtcttgcggggatggcgtttactaatatttgccgattc 35329440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46698505 - 46698428
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||| || |||||| ||||||| |||||||| ||||    
T  46698505 atatgcggcaccatttgtatcttgtttcgaccataccttgcgtctttcatggatgacgtttaataatatttgctgatt 46698428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 49528441 - 49528514
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgcc 74  Q
    |||||||||||||||||||||||| |||| |||||||||| || |||| ||| || ||||||||||||||||||    
T  49528441 atatgcggcaccatttgtatcttgtttcgtccataccttatgttttgcggggttggtgtttaatgatatttgcc 49528514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 79
Target Start/End: Original strand, 30964803 - 30964870
Alignment:
Q  12 catttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||||||||| |||| ||||||||| ||||||||||||||| |||||||| ||||||| ||||||    
T  30964803 catttgtatcttgtttcgtccataccttgcgtcttgcagggatggtgtttaataatatttgtcgattc 30964870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 27555657 - 27555579
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgc-agggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||| |||||||||||| |||| ||||||||| ||||||||  ||||||  ||||||| |||||||||||||    
T  27555657 atatgcggcacaatttgtatcttgtttcgtccataccttgcgtcttgcgggggatggcgtttaataatatttgccgatt 27555579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7703042 - 7703118
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||  |||  |||||||||  ||||||| ||||||| ||||||| |||||||||||||    
T  7703042 atatgcggcaccatttgtatcttt-ttcatccataccttgtgtcttgcggggatgacgtttaataatatttgccgatt 7703118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 8705866 - 8705789
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| |||||||||||||| ||  ||| ||||||||  ||||||| |||||||| ||||||| |||||||||||||    
T  8705866 atatgcagcaccatttgtatcctgcctcgtccatacctcgcgtcttgaagggatgacgtttaataatatttgccgatt 8705789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 9750122 - 9750198
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||| ||| | |||||||| ||||||| ||||||| ||||||| |||||    
T  9750122 atatgcggcaccatttgtatcttgtttcgtccaaacc-tgcgtcttgcggggatgacgtttaataatatttgtcgatt 9750198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 30167278 - 30167212
Alignment:
Q  12 catttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    ||||||||||||| |||| ||||||||| ||||||||  |||||| ||||||| ||||||| |||||    
T  30167278 catttgtatcttgtttcgtccataccttgcgtcttgcgaggatgacgtttaataatatttgtcgatt 30167212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4306060 - 4306137
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||||||||| ||||||  ||||  |||||||| |||||| | |||||||  |||||| ||||||||||||||    
T  4306060 atatgcggcaccatttatatcttt-ttcgttcataccttgcgtcttccggggatgacatttaataatatttgccgattc 4306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 35341079 - 35341006
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgc--agggatgatgtttaatgatatttg 72  Q
    ||||| |||||||||||||||||| |||| |||||| || ||||||||   ||||||| ||||||| |||||||    
T  35341079 atatgtggcaccatttgtatcttgtttcgtccatacattgcgtcttgcggggggatgacgtttaataatatttg 35341006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 14436993 - 14436916
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||||| |||||||| ||||||  ||||||| |||||||| ||||    
T  14436993 atatgcggcaccatttgtatcttgtttcgtccataccttgcgtcttgcggggatggcgtttaataatatttgctgatt 14436916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15457817 - 15457893
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    |||||||||||||||||||||||| |||| ||||| | | |||||||| ||||||| |||||||  |||||||||||    
T  15457817 atatgcggcaccatttgtatcttgtttcgtccatatcatgcgtcttgcggggatgacgtttaatattatttgccgat 15457893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3745696 - 3745774
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||| ||||||||||||||||| |||| ||||||||| ||||||   |||||||  |||||| ||||||||||||||    
T  3745696 atatgcagcaccatttgtatcttgtttcgtccataccttgcgtcttatggggatgacatttaataatatttgccgattc 3745774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 5254608 - 5254685
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||||  |||||| ||||||| |||||||| |||||    
T  5254608 atatgcggcaccatttgtatctat-ttcgtccataccttacgtcttgcgaggatgacgtttaataatatttgctgattc 5254685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10524453 - 10524529
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| ||||||||||||| ||| |||| ||||||||| |||||||||||| ||  ||||||| |||||||||||||    
T  10524453 atatgctgcaccatttgtatattgtttcgtccataccttgcgtcttgcaggg-tggcgtttaataatatttgccgatt 10524529  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14405554 - 14405630
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||| ||||||||||||||||| ||||  |||||||||||||||||||| || | ||||||| |||||||| ||||    
T  14405554 atatgcagcaccatttgtatcttg-ttcgttcataccttacgtcttgcaggaataacgtttaataatatttgctgatt 14405630  T

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Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 43816173 - 43816095
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||||||||| ||||||||  ||| |||| ||||||||| ||| |||| || |||| ||||||| ||||||||||||||    
T  43816173 atatgcggcatcatttgtactttgtttcgtccataccttgcgttttgcgggaatgacgtttaataatatttgccgattc 43816095  T

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Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 387531 - 387608
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| ||||||| | || ||||| | ||||| ||||||| |||| || |||||    
T  387531 atatgcggcaccatttgtatcttgtttcgtccataccctgcgacttgcggtgatgacgtttaataatatctgtcgatt 387608  T

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Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 17116614 - 17116553
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgttta 62  Q
    |||||||||| |||||||||||||  ||| ||||||||| |||||||| ||||||| |||||    
T  17116614 atatgcggcatcatttgtatcttgtctcgtccataccttgcgtcttgcggggatgacgttta 17116553  T

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Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39338587 - 39338510
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| |||| |||||| || |||||| |   ||||  ||||||| |||||||||||||    
T  39338587 atatgcggcaccatttgtatcttgtttcgtccatacattgcgtcttacgatgatggcgtttaataatatttgccgatt 39338510  T

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Target: scaffold0172 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19273 - 19349
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgat 77  Q
    |||||||||||||||||||||||| |||| ||||||| | ||||||||  |||||| ||||||| ||||||||||||    
T  19273 atatgcggcaccatttgtatcttgtttcgtccataccatgcgtcttgcgaggatgacgtttaataatatttgccgat 19349  T

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Target: scaffold0343 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 6060 - 6131
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttg 72  Q
    |||| |||||||||||||||||||  |||  |||| ||| |||||||| ||||||| ||||||| |||||||    
T  6060 atatacggcaccatttgtatcttgtctcgttcatatcttgcgtcttgcggggatgacgtttaataatatttg 6131  T

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Target: scaffold0434 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2399 - 2353
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttg 47  Q
    |||||||||||||| ||||||||| |||| ||||||||| |||||||    
T  2399 atatgcggcaccatctgtatcttgtttcgtccataccttgcgtcttg 2353  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 48690 - 48767
Alignment:
Q  1 atatgcggcaccatttgtatcttgattcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgatt 78  Q
    |||||||||||||||||||||||| || | ||||| |||  ||||||| |||| || ||| ||| |||||||| ||||    
T  48690 atatgcggcaccatttgtatcttgtttagtccatatcttgtgtcttgcggggaggacgttgaataatatttgcggatt 48767  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 35525 - 35472
Alignment:
Q  26 ttcggccataccttacgtcttgcagggatgatgtttaatgatatttgccgattc 79  Q
    |||| |||||||||||||||| | ||||||| ||| ||| ||||||||||||||    
T  35525 ttcgtccataccttacgtcttacggggatgacgttcaataatatttgccgattc 35472  T

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