View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16167_high_3 (Length: 254)
Name: NF16167_high_3
Description: NF16167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16167_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 10 - 239
Target Start/End: Complemental strand, 47833202 - 47832973
Alignment:
| Q |
10 |
aatatatgaagtgtcataagcatatttatctatgtattctattgtttgttcattatttccttagcctctacccattatttgctatttgaactacactcat |
109 |
Q |
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| T |
47833202 |
aatatatgaagtgtcataagcatatttatctatgtattctattgtttgttcattatttccttagcctctacccattatttgctatttgaactacactcat |
47833103 |
T |
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| Q |
110 |
atgatgaacacttccatacaaaaaataagacattgtgcataccatctggatccttccttaacattctctatggtaaatgcttctagtgactcaaaaggta |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47833102 |
atgatgaacacttccatacaaaaaataagacattgtgcataccatctggatccttccttaacattctctatggtaaatgcttctagtgactcaaaaggta |
47833003 |
T |
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| Q |
210 |
tgtctgtatgcatcctgtgatcagcatagt |
239 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
47833002 |
tgtctgtatgcatcctgtgatcagcatagt |
47832973 |
T |
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