View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF16167_high_5 (Length: 216)
Name: NF16167_high_5
Description: NF16167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16167_high_5 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 17 - 193
Target Start/End: Original strand, 30357315 - 30357491
Alignment:
| Q |
17 |
cataggtaataggaggaagtggcttaccttttcagattggatggccttaacagtgaagttaaattgccttctagaaggtaattgatggagtggggaagag |
116 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30357315 |
cataagtaataggaggaagtggcttaccttttcagattggatggccttaacagtgaagttaaattgccttctagaaggtaattgatggagtggggaagag |
30357414 |
T |
|
| Q |
117 |
ccacaaagacctctaggtgtgaccaaaggtctagtgaagctggacttgagttggcttgccataggagaagcagctgc |
193 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30357415 |
ccacaaagtcctctaggtgtgaccaaaggtctagtgaagctggacttgagttggcttgccataggagaagcagctgc |
30357491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University