View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16167_low_1 (Length: 710)

Name: NF16167_low_1
Description: NF16167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16167_low_1
NF16167_low_1
[»] chr7 (1 HSPs)
chr7 (21-692)||(26920802-26921473)


Alignment Details
Target: chr7 (Bit Score: 606; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 606; E-Value: 0
Query Start/End: Original strand, 21 - 692
Target Start/End: Complemental strand, 26921473 - 26920802
Alignment:
Q  21 aacaagagcgaaaattaaaacacaaccagagaatcatttcgcctcctatcaagatcaatcaacctcagtcgaacaggacgaagactaggaacaagctaca 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26921473 aacaagagcgaaaattaaaacacaaccagagaatcatttcgcctcctatcaagatcaatcaacctcagtcgaacaggacgaagactaggaacaagctaca 26921374  T
Q  121 gagtcgaccaacccctagacaaatccgcaacatgacattgcacttttaataccctacctgaccaaatactaccatttccatccgtaatgttgtttggtgt 220  Q
    ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26921373 gagtcgaccaacccctagacaaatccgcagcatgacattgcaaatttaataccctacctgaccaaatactaccatttccatccgtaatgttgtttggtgt 26921274  T
Q  221 gaactctgaactactaatctcctgattctcactcaagaatcgtaaacgtatggctgctgtatcataatgaaacgccttggatatagcatattcatttaca 320  Q
    |||||||||||||||||||||||||||||||    ||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  26921273 gaactctgaactactaatctcctgattctca----agaatcgtatacgtatagctgctgtatcataatgaaacgccttggatattgcatattcatttaca 26921178  T
Q  321 agttttaatatactatattacatgaatcttagataagctaagaaattcat----gcatgcctcgtcagctaacaaagaatctgattgaggttggtaagat 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26921177 agttttaatatactatattacatgaatcttagataagctaagaaattcattcatgcatgcctcgtcagctaacaaagaatctgattgaggttggtaagat 26921078  T
Q  417 aagatcatttgctcttgcaatgaatttaatattactagcttgctcatcatctacgggtcttcatctattaaacagacacatatcttatcttttgatatat 516  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26921077 aagatcatttcctcttgcaatgaatttaatattactagcttgctcatcatctacgggtcttcatctattaaacagacacatatcttatcttttgatatat 26920978  T
Q  517 agacacactaccaactgatattgttatctacaagagttacattcagcataaaaaatcattcagcatataaataagtaatctaccctacagctagtagaac 616  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26920977 agacacactaccaactgatattgttatctacaagaattacattcagcataaaaaatcattcagcatataaataagtaatctaccctacagctagtagaac 26920878  T
Q  617 ctatggtaaaataaatagttttaataataattaatttttatttccagattttgcgtgtaaggcttcatttcttgtt 692  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26920877 ctatggtaaaataaatagttttaataataattcatttttatttccagattttgcgtgtaaggcttcatttcttgtt 26920802  T

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