View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16169_high_6 (Length: 290)
Name: NF16169_high_6
Description: NF16169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16169_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 23 - 275
Target Start/End: Original strand, 8274580 - 8274832
Alignment:
| Q |
23 |
tagtctaggacattgacagccatccaattccatgatgatgatgctgtttcttatcttattcatattttttataaaaataaattattatttgtcctaaaga |
122 |
Q |
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| T |
8274580 |
tagtctaggacattgacagccatccaattccatgatgatgatgctatttcttatcttattcttattttttataaaaataaattattatttgtcctaaaga |
8274679 |
T |
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| Q |
123 |
aagatccctcttgttttgataatgtacaatttcgtcttgttcctcatccaatctaatccatctcctcgagatataggaaagagagacaaaccaagtctaa |
222 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8274680 |
aagatccctcttcttttgataatgtacaatttcgtcttgttcctcatccaatctaatccatctcctcgagatataggaaagagagacaaaccaagtctaa |
8274779 |
T |
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| Q |
223 |
aacaggactgnnnnnnnggtccctttacatgtgactcattttattagtctctg |
275 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
8274780 |
aacaggactgtgtttttggtccctttacatgtgactcattttattagtctctg |
8274832 |
T |
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