View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16169_low_8 (Length: 229)
Name: NF16169_low_8
Description: NF16169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16169_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 3810133 - 3810328
Alignment:
| Q |
18 |
cagtgtcaacagagctgcagggactatagaaaggaaacctataacttctgtgacaagagaggtgaataaaactttcatgatgagcaaaatcttaccagcc |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3810133 |
cagtgtcaacagagctgcagggactatagaaaggaaacctataacttctgtgacaagagaggtgaataaaactttcatgatgagcaaaatcttaccagcc |
3810232 |
T |
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| Q |
118 |
cttaagaattgctggccaatagaagatgtagggaagacaattttcattcaacaagacaatgcaaagtctcatatttctaaagatgatcctgatttt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
3810233 |
cttaagaattgctggccaatagaagatgtagggaagacaattttcattcaacaagagaatgcaaagtctcatatttctaaagatgatcctgatttt |
3810328 |
T |
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