View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1616_low_2 (Length: 492)

Name: NF1616_low_2
Description: NF1616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1616_low_2
NF1616_low_2
[»] chr2 (27 HSPs)
chr2 (11-478)||(39371809-39372276)
chr2 (12-80)||(39379530-39379598)
chr2 (148-269)||(39179550-39179673)
chr2 (12-119)||(39386325-39386432)
chr2 (147-261)||(39386436-39386551)
chr2 (148-269)||(39224558-39224679)
chr2 (12-82)||(39217461-39217531)
chr2 (12-84)||(39179713-39179785)
chr2 (12-84)||(39396222-39396294)
chr2 (364-423)||(39154055-39154114)
chr2 (19-111)||(39224691-39224783)
chr2 (30-74)||(39419841-39419885)
chr2 (187-263)||(39188479-39188557)
chr2 (189-263)||(39419997-39420071)
chr2 (9-82)||(2363546-2363619)
chr2 (26-74)||(39471488-39471537)
chr2 (195-263)||(39452109-39452177)
chr2 (30-82)||(44748567-44748619)
chr2 (187-269)||(39139828-39139908)
chr2 (47-82)||(44625143-44625178)
chr2 (12-94)||(39125272-39125354)
chr2 (187-233)||(39379675-39379721)
chr2 (378-420)||(39412244-39412286)
chr2 (370-423)||(39453738-39453791)
chr2 (26-82)||(39139996-39140052)
chr2 (187-263)||(39145001-39145077)
chr2 (50-82)||(39425302-39425334)
[»] chr5 (3 HSPs)
chr5 (187-263)||(33563213-33563289)
chr5 (12-92)||(33563372-33563452)
chr5 (30-71)||(17061239-17061280)
[»] chr6 (1 HSPs)
chr6 (12-84)||(16115260-16115332)
[»] chr4 (1 HSPs)
chr4 (11-78)||(33153120-33153187)


Alignment Details
Target: chr2 (Bit Score: 416; Significance: 0; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 11 - 478
Target Start/End: Complemental strand, 39372276 - 39371809
Alignment:
Q  11 atgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaattccacatcaccgtaacttactagaaca 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39372276 atgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaattccacatcaccgtaacttactagaaca 39372177  T
Q  111 ggcataaaataagttataaacttcgaattaatgaaggaaaaaattaagcagattgtactgaatatttcnnnnnnnttcaaaccatttataaaatagaaga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||    
T  39372176 ggcataaaataagttataaacttcgaattaatgaaggaaaaaattaagcagattgtactgaatatttcaaaaaaattcaaaccatttataaaatagaaga 39372077  T
Q  211 gatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaaaaccaatcacatatcagtttttctccaccaactaataaattaatctt 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39372076 gatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaaaaccaatcacatatcagtttttctccaccaactaataaattaatctt 39371977  T
Q  311 agtatctttgcatataatgtccatagttattacttctaatctagttcaactttgcaaatttaaaaaagagttgtccaatttcttaaaatgattcatttcg 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39371976 agtatctttgcatataatgtccatagttattacttctaatctagttcaactttgcaaatttaaaaaagagttgtccaatttcttaaaatgattcatttcg 39371877  T
Q  411 cccatttcctttaactggttcnnnnnnnnnctccaccaattgacaatggcattttaacaacaaaaaat 478  Q
    |||||||||||||||||||||         |||| |||||||||||||||||||||||||||||||||    
T  39371876 cccatttcctttaactggttctttttttttctcctccaattgacaatggcattttaacaacaaaaaat 39371809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 39379530 - 39379598
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaaga 80  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  39379530 tgaatctaacagctacaacaaattgcttcctcttgataagattctcaacaaaatctgcaaggtgcaaga 39379598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 39179673 - 39179550
Alignment:
Q  148 aaaaaattaagcagattgtactgaatatttcnnnnnnnttcaaaccatttataaaatagaagagatacataaaa--ggagagataaatttcaagtctgct 245  Q
    |||||| ||||||||||| |||||| |||||        |||||||||||| ||||||||||||||||||||||   ||||||||||||||||||||  |    
T  39179673 aaaaaactaagcagattgaactgaacatttcacaatttatcaaaccatttagaaaatagaagagatacataaaaagagagagataaatttcaagtctaat 39179574  T
Q  246 tcactttccaagcattaaaaccaa 269  Q
    ||| |||| |||||||||||||||    
T  39179573 tcattttcaaagcattaaaaccaa 39179550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 39386325 - 39386432
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaattccacatcaccgtaacttactagaacag 111  Q
    |||||||||||||| ||||||||||||||||| | ||||||| || ||||||||||| ||| ||||||||||| ||| ||| | ||||||| |||||||     
T  39386325 tgaatctaacagcttcaacaaattgcttcctcttgataagatgcttaacaaaatctggaagatgcaagaaatttcacttcatcataacttattagaacat 39386424  T
Q  112 gcataaaa 119  Q
     |||||||    
T  39386425 acataaaa 39386432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 39386436 - 39386551
Alignment:
Q  147 gaaaaaattaagcagattgtactgaatatttcnnnnnnnttcaaaccatttataaaatagaagagatacataaaaggagagataaatttc-aagtctgct 245  Q
    ||||||| ||||||||||| ||||||||||||        |||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||  |    
T  39386436 gaaaaaactaagcagattgaactgaatatttcaaaatttgtcaaaccatttagaaactagaagagatacataaaaggagagataaatttcgaagtctaat 39386535  T
Q  246 tcactttccaagcatt 261  Q
    ||| |||| |||||||    
T  39386536 tcattttcaaagcatt 39386551  T

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Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 148 - 269
Target Start/End: Complemental strand, 39224679 - 39224558
Alignment:
Q  148 aaaaaattaagcagattgtactgaatatttcnnnnnnnttcaaaccatttataaaatagaagagatacataaaaggagagataaatttcaagtctgcttc 247  Q
    ||||||||||||||| || ||||||||||||        |||||||||||| ||||||| | |||||||  ||| |||||||||||||||| |||| |||    
T  39224679 aaaaaattaagcagaatgaactgaatatttcaaattttgtcaaaccatttagaaaatagtatagatacaagaaaagagagataaatttcaattctgtttc 39224580  T
Q  248 actttccaagcattaaaaccaa 269  Q
    | |||| |||||||||||||||    
T  39224579 attttcaaagcattaaaaccaa 39224558  T

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Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 82
Target Start/End: Complemental strand, 39217531 - 39217461
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaa 82  Q
    |||||||||||||| |||||||||| ||  ||||||||||||||| ||||||| |||||||||||||||||    
T  39217531 tgaatctaacagctccaacaaattgttttttcctaataagattcttaacaaaacctgcaaggtgcaagaaa 39217461  T

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Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 39179785 - 39179713
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaatt 84  Q
    |||||||||||||| |||||| |||||||||  | ||||||| || ||||||||||||||| |||||||||||    
T  39179785 tgaatctaacagctgcaacaatttgcttcctgttgataagatgcttaacaaaatctgcaagatgcaagaaatt 39179713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 39396222 - 39396294
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaatt 84  Q
    |||||||||||||||||||||| ||||| ||||| |||||||| | |||||||||||| |||  |||||||||    
T  39396222 tgaatctaacagctacaacaaactgctttctcctgataagatttttaacaaaatctgcgaggaacaagaaatt 39396294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 364 - 423
Target Start/End: Complemental strand, 39154114 - 39154055
Alignment:
Q  364 gcaaatttaaaaaagagttgtccaatttcttaaaatgattcatttcgcccatttccttta 423  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||| |||||||| ||||    
T  39154114 gcaaatttaaacaagagttgtcttatttcttaaaatgattcatttcacccatttctttta 39154055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 39224783 - 39224691
Alignment:
Q  19 aacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaattccacatcaccgtaacttactagaacag 111  Q
    ||||||| |||||| |||||||||| | ||||||  || ||||||||||||||| ||||||||||| ||| ||| |  ||||||||| |||||    
T  39224783 aacagcttcaacaatttgcttcctcatgataagacgcttaacaaaatctgcaagatgcaagaaatttcacttcatcaaaacttactacaacag 39224691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 74
Target Start/End: Original strand, 39419841 - 39419885
Alignment:
Q  30 caaattgcttcctcctaataagattctcaacaaaatctgcaaggt 74  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  39419841 caaattgcttcctccttataagattctcaacaaaatctgcgaggt 39419885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 39188479 - 39188557
Alignment:
Q  187 tcaaaccatttataaaatagaagagatacata--aaaggagagataaatttcaagtctgcttcactttccaagcattaa 263  Q
    |||||||||||  ||||||||||| |||||||  ||| ||||||||||||| |||||| ||||| |||| |||||||||    
T  39188479 tcaaaccatttgaaaaatagaagaaatacatataaaaagagagataaatttgaagtctacttcaatttcgaagcattaa 39188557  T

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Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 39419997 - 39420071
Alignment:
Q  189 aaaccatttataaaatagaagagatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaa 263  Q
    |||||||||| ||||| |||||||| | ||||| |||||||||||||||||| |  |||| ||| ||||||||||    
T  39419997 aaaccatttagaaaatggaagagatgcgtaaaaagagagataaatttcaagtatatttcattttacaagcattaa 39420071  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 2363619 - 2363546
Alignment:
Q  9 agatgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaa 82  Q
    ||||||||||||||||  ||| | |||||| | || | |||||||||| |||||||||||||||||||| ||||    
T  2363619 agatgaatctaacagcctcaatatattgctgcttcatgataagattctgaacaaaatctgcaaggtgcaggaaa 2363546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 39471488 - 39471537
Alignment:
Q  26 acaacaaattgcttcctcctaataag-attctcaacaaaatctgcaaggt 74  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  39471488 acaacaaattgcttcttcctaataagttttctcaacaaaatctgcaaggt 39471537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 39452177 - 39452109
Alignment:
Q  195 tttataaaatagaagagatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaa 263  Q
    |||| ||||| |||||||| ||||||| |||||||| ||||||||||   |||| ||||||||||||||    
T  39452177 tttagaaaatggaagagatgcataaaaagagagatacatttcaagtcaatttcattttccaagcattaa 39452109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 44748619 - 44748567
Alignment:
Q  30 caaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaa 82  Q
    |||||| |||| || | ||||||||||||||||||||||||||||| ||||||    
T  44748619 caaatttcttcatcttgataagattctcaacaaaatctgcaaggtgtaagaaa 44748567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 39139908 - 39139828
Alignment:
Q  187 tcaaaccatttataaaatagaagagatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaaaaccaa 269  Q
    ||||||||||||||| || |||||||||||| ||  ||||||| ||||| ||||||  |||| |||||| ||||||| |||||    
T  39139908 tcaaaccatttataacatggaagagatacatgaa--gagagatgaatttgaagtctatttcattttccacgcattaacaccaa 39139828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 82
Target Start/End: Complemental strand, 44625178 - 44625143
Alignment:
Q  47 ataagattctcaacaaaatctgcaaggtgcaagaaa 82  Q
    ||||||||||||||||||||||||||||| ||||||    
T  44625178 ataagattctcaacaaaatctgcaaggtgtaagaaa 44625143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 39125354 - 39125272
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaattccacatcacc 94  Q
    |||||||||||||| || || ||||||  ||| | ||||||||||| |||||| |||||||||  |||||||| ||| |||||    
T  39125354 tgaatctaacagcttcatcatattgctgtctcttgataagattctcgacaaaaactgcaaggtttaagaaatttcacttcacc 39125272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 233
Target Start/End: Original strand, 39379675 - 39379721
Alignment:
Q  187 tcaaaccatttataaaatagaagagatacataaaaggagagataaat 233  Q
    |||||||||||| ||||||||| |||||||||||  |||||||||||    
T  39379675 tcaaaccatttagaaaatagaaaagatacataaatagagagataaat 39379721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 420
Target Start/End: Original strand, 39412244 - 39412286
Alignment:
Q  378 gagttgtccaatttcttaaaatgattcatttcgcccatttcct 420  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||    
T  39412244 gagttgtcctatttcttaaaaggattcatttcacccatttcct 39412286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 423
Target Start/End: Complemental strand, 39453791 - 39453738
Alignment:
Q  370 ttaaaaaagagttgtccaatttcttaaaatgattcatttcgcccatttccttta 423  Q
    ||||| ||||||||| | ||||| ||||| |||||||||| |||||||||||||    
T  39453791 ttaaacaagagttgttctatttcataaaaggattcatttcacccatttccttta 39453738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 39140052 - 39139996
Alignment:
Q  26 acaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaa 82  Q
    ||||||||||||||| |||| |||||||  |||||||| |||| ||||| |||||||    
T  39140052 acaacaaattgcttcttcctgataagatcttcaacaaattctgtaaggtacaagaaa 39139996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 39145077 - 39145001
Alignment:
Q  187 tcaaaccatttataaaatagaagagatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaa 263  Q
    |||||||||||  ||||||||||| ||||||| ||  ||||||| |||| ||| || ||||| |||| |||||||||    
T  39145077 tcaaaccatttgaaaaatagaagaaatacatataaaaagagatatatttgaagcctacttcaatttcaaagcattaa 39145001  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 39425302 - 39425334
Alignment:
Q  50 agattctcaacaaaatctgcaaggtgcaagaaa 82  Q
    ||||| |||||||||||||||||||||||||||    
T  39425302 agattatcaacaaaatctgcaaggtgcaagaaa 39425334  T

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Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 263
Target Start/End: Complemental strand, 33563289 - 33563213
Alignment:
Q  187 tcaaaccatttataaaatagaagagatacataaaaggagagataaatttcaagtctgcttcactttccaagcattaa 263  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  |||| |||| |||||||||    
T  33563289 tcaaaccatttagaaaatagaagagatacataaaatgagagataaatttcaagtctatttcattttcaaagcattaa 33563213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 33563452 - 33563372
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaattccacatca 92  Q
    |||||||||||||| |||||| |||||||||  | ||||||| || ||||||||||||||| ||||||||||| ||| |||    
T  33563452 tgaatctaacagctgcaacaatttgcttcctgttgataagatgcttaacaaaatctgcaagatgcaagaaatttcacttca 33563372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 17061280 - 17061239
Alignment:
Q  30 caaattgcttcctcctaataagattctcaacaaaatctgcaa 71  Q
    |||||| ||||||| | |||||||||||||||||||||||||    
T  17061280 caaattccttcctcttgataagattctcaacaaaatctgcaa 17061239  T

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Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 16115332 - 16115260
Alignment:
Q  12 tgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaagaaatt 84  Q
    |||||||||||||| ||||||||||||| ||||| |||||||  | ||||||||||||||||| |||||||||    
T  16115332 tgaatctaacagcttcaacaaattgctttctcctgataagatatttaacaaaatctgcaaggtacaagaaatt 16115260  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 33153187 - 33153120
Alignment:
Q  11 atgaatctaacagctacaacaaattgcttcctcctaataagattctcaacaaaatctgcaaggtgcaa 78  Q
    ||||||||||||||| ||| |  ||||||| |||  |||||||||| ||||||||||||||| |||||    
T  33153187 atgaatctaacagcttcaatatgttgcttcttccggataagattctgaacaaaatctgcaagttgcaa 33153120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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