View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16171_low_14 (Length: 221)
Name: NF16171_low_14
Description: NF16171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16171_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 13 - 208
Target Start/End: Complemental strand, 21285566 - 21285371
Alignment:
| Q |
13 |
aatagtggttggagtgatgaaaagtaataagttcgaatttactctaataacaaaaataacaaccaacattagtcattaaaaaatgtcttatttgtatcta |
112 |
Q |
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| T |
21285566 |
aatagtggtttgagtgatgaaaagtaataagttcgaattcactctaataacaaaaataacaaccaacattagtcattaaaaaatgtcttatttgtatcta |
21285467 |
T |
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| Q |
113 |
aactatcctatatttaataaatcctttcaccttcaatcacaatatgcactttttagtattaaaaagaaaccactttatcttaaaaatgagtataat |
208 |
Q |
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|||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
21285466 |
aactatcccatatttaatagatcctttcaccttcaatcacaatatgcactttttagtattaaaaagaaactactttatcttaaaaatgagtataat |
21285371 |
T |
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