View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16171_low_4 (Length: 370)

Name: NF16171_low_4
Description: NF16171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16171_low_4
NF16171_low_4
[»] chr3 (9 HSPs)
chr3 (1-363)||(13307965-13308327)
chr3 (1-363)||(10149530-10149892)
chr3 (1-363)||(14694316-14694678)
chr3 (6-363)||(10780924-10781281)
chr3 (1-156)||(16467042-16467197)
chr3 (1-156)||(16470903-16471058)
chr3 (8-94)||(15201058-15201144)
chr3 (8-110)||(14135468-14135570)
chr3 (8-77)||(15240262-15240331)
[»] chr2 (7 HSPs)
chr2 (1-356)||(23201723-23202078)
chr2 (1-356)||(23675564-23675919)
chr2 (2-356)||(22637061-22637415)
chr2 (1-355)||(24910638-24910992)
chr2 (1-355)||(23815646-23816000)
chr2 (4-94)||(19118882-19118972)
chr2 (4-79)||(25117532-25117607)
[»] chr7 (6 HSPs)
chr7 (1-356)||(18172730-18173085)
chr7 (6-363)||(14343746-14344103)
chr7 (4-356)||(15763761-15764112)
chr7 (1-356)||(11978017-11978372)
chr7 (103-363)||(18134625-18134885)
chr7 (1-109)||(18139895-18140003)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-356)||(37344-37699)
[»] chr6 (6 HSPs)
chr6 (1-363)||(23433840-23434201)
chr6 (4-363)||(19036267-19036625)
chr6 (4-356)||(1552263-1552614)
chr6 (1-232)||(16211728-16211959)
chr6 (3-172)||(19270432-19270601)
chr6 (4-59)||(17801880-17801935)
[»] chr4 (3 HSPs)
chr4 (1-356)||(13290464-13290819)
chr4 (4-363)||(14773657-14774016)
chr4 (1-337)||(18564918-18565254)
[»] chr8 (4 HSPs)
chr8 (1-363)||(17423944-17424306)
chr8 (1-363)||(22349854-22350216)
chr8 (1-356)||(22066503-22066858)
chr8 (160-363)||(15913038-15913241)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-356)||(16138-16493)
[»] scaffold0080 (1 HSPs)
scaffold0080 (4-356)||(4319-4671)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-363)||(28423-28775)
[»] chr5 (6 HSPs)
chr5 (1-355)||(21509732-21510086)
chr5 (1-347)||(26271951-26272296)
chr5 (8-94)||(22853604-22853690)
chr5 (4-94)||(23658376-23658466)
chr5 (4-94)||(23800104-23800194)
chr5 (7-139)||(25557181-25557313)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-363)||(127813-128174)
[»] chr1 (3 HSPs)
chr1 (1-363)||(22806927-22807289)
chr1 (6-357)||(41381419-41381770)
chr1 (66-355)||(21166246-21166535)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-356)||(24950-25305)
[»] scaffold0023 (3 HSPs)
scaffold0023 (1-356)||(64074-64429)
scaffold0023 (1-356)||(73252-73607)
scaffold0023 (1-145)||(4723-4867)
[»] scaffold0005 (1 HSPs)
scaffold0005 (4-363)||(65714-66073)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-355)||(140060-140414)
[»] scaffold0656 (1 HSPs)
scaffold0656 (1-356)||(3784-4139)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-356)||(38690-39044)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-363)||(6628-6990)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-356)||(3845-4200)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-356)||(160163-160518)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-299)||(32494-32791)
[»] scaffold0740 (1 HSPs)
scaffold0740 (1-173)||(289-461)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-356)||(180400-180755)
[»] scaffold0362 (1 HSPs)
scaffold0362 (15-290)||(13226-13501)
[»] scaffold0013 (6 HSPs)
scaffold0013 (6-356)||(146539-146889)
scaffold0013 (7-356)||(82529-82878)
scaffold0013 (7-356)||(120201-120550)
scaffold0013 (112-356)||(147685-147929)
scaffold0013 (6-116)||(133294-133404)
scaffold0013 (6-116)||(137823-137933)
[»] scaffold0319 (1 HSPs)
scaffold0319 (4-185)||(8632-8813)
[»] scaffold0053 (1 HSPs)
scaffold0053 (15-356)||(43376-43717)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-355)||(68765-69119)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-337)||(134699-135035)
[»] scaffold0241 (1 HSPs)
scaffold0241 (257-363)||(10472-10578)
[»] scaffold1714 (1 HSPs)
scaffold1714 (1-79)||(1367-1445)
[»] scaffold0757 (1 HSPs)
scaffold0757 (4-78)||(1880-1954)
[»] scaffold0401 (2 HSPs)
scaffold0401 (8-94)||(1397-1483)
scaffold0401 (237-357)||(1626-1746)


Alignment Details
Target: chr3 (Bit Score: 299; Significance: 1e-168; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 13308327 - 13307965
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13308327 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagccagaac 13308228  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
     |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  13308227 gaataggttccctaagaaagagaaagttgcttatatcgatactagggatagtgagccagaattcgattggggttccgattctgtagaagataacgaaata 13308128  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    |||||||||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| |  |||||| |||||||||||||||||||||    
T  13308127 aatctcgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgcagaagaacccaaaaatgataaatatcccc 13308028  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13308027 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctgatg 13307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 10149530 - 10149892
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| || ||||| |||||||||||||| | |||    
T  10149530 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaaagccaaaac 10149629  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | ||||||||||||| || |||||||||||||||| |||||||    
T  10149630 aaataggttccctaagaaagagaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagataacgaaata 10149729  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||| || |||||| | |||||||||||||||||||    
T  10149730 aatcttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaatgggaaaaacgtagaagaaccaaaaaatgataaatatcccc 10149829  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  10149830 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagttgctgatg 10149892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 14694678 - 14694316
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  14694678 ctgtccgaaagaaattggatatacaataccttagggatatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaaagccaggac 14694579  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||| | |||||||||||||||  |||||||| |||||||||||| ||    
T  14694578 aaataggttccctaagaaagaaaaagttgcttatatcgaaactggggaaagtgagccagaattcgattggggtttcgattctgtcgaagatagcgaagta 14694479  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    |||||||| ||||||||||||||||  ||||||||||| ||||| |||||||||||||| |||||||| || |||||| |||||||||||||||||||||    
T  14694478 aatctcgcggaattaaaagatgggccgccttacacttgtaaattattaaggccatcaaacgggaaaaacgtagaagaacccaaaaatgataaatatcccc 14694379  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||    
T  14694378 caaaaacttatacttttgatgtgtctaagtgtgaagaaatattcgatcttttagttgctgatg 14694316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 6 - 363
Target Start/End: Original strand, 10780924 - 10781281
Alignment:
Q  6 cgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaata 105  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| || || |||||||    
T  10780924 cgaaagaaattggatacacaataccttagggacatggcacaattagcagatagagtccgccaagtggaaagactcaaggctgaaaaggccaggacaaata 10781023  T
Q  106 ggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatct 205  Q
    | |||||||||||||| ||||||| ||| ||||| |||||||||||||||| | |||||||||||||||  ||||| || || || ||||||||||||||    
T  10781024 gattccctaagaaagaaaaagttggttacatcgaaactggggatagtgagccagaattcgattggggtttcgattccgttgaggacagcgaaataaatct 10781123  T
Q  206 cgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaa 305  Q
    ||| || |||||||| ||||  |||||||||||||||||||||||||||||||| || ||||| || |||||  |||||||| ||||||||||| |||||    
T  10781124 cgcggagttaaaagaagggccgccttacacttgcaaattgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaattataaatatccctcaaaa 10781223  T
Q  306 acttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||| |||||||| |||||| | ||||||||||||||||||||||||| |||||    
T  10781224 acttatacgtttgatgtatctaaaagcgaagaaatatttgatcttttagttgctgatg 10781281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16467042 - 16467197
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||    
T  16467042 ctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaaagccaaaac 16467141  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagc 156  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  16467142 aaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagc 16467197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16471058 - 16470903
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||    
T  16471058 ctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaaagccaaaac 16470959  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagc 156  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||    
T  16470958 aaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagc 16470903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 15201058 - 15201144
Alignment:
Q  8 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 94  Q
    ||||||||||||||  |||||||| || || ||||| |||||||||||||||||||| ||||| |||||||| || |||||||||||    
T  15201058 aaagaaattagatatgcaatatctaagagatatggcacaattagcagatagagtccgacaagtcgaaagacttaaagctgaaaaagc 15201144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 110
Target Start/End: Original strand, 14135468 - 14135570
Alignment:
Q  8 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatagg 107  Q
    ||||||| |||||||||||||||| || || ||||| |||||||| ||||||||| | ||||| | |||||| || | ||||||||| || || ||||||    
T  14135468 aaagaaactagatacacaatatctaagagatatggcacaattagctgatagagtctgacaagtcggaagacttaaagatgaaaaagcaaggactaatagg 14135567  T
Q  108 ttc 110  Q
    |||    
T  14135568 ttc 14135570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 15240262 - 15240331
Alignment:
Q  8 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaaga 77  Q
    ||||||||||||||  |||||||| || || || ||||||||||||||||||||||| ||||| ||||||    
T  15240262 aaagaaattagatatgcaatatctaagagatatagcgcaattagcagatagagtccgacaagtcgaaaga 15240331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 280; Significance: 1e-157; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 23202078 - 23201723
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||| |||||    
T  23202078 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaaagccagaac 23201979  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  23201978 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagataacgaaata 23201879  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  23201878 aatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatcccc 23201779  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  23201778 taaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatcttctagtt 23201723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 23675919 - 23675564
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||| |||||    
T  23675919 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaaagccagaac 23675820  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  23675819 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagccagaattcgattggggttcagattctgtagaagataacgaaata 23675720  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  23675719 aatcttgcagaattaaaagatgggccgccttacacttgcaaattgttgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatcccc 23675620  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  23675619 taaaaacttatactttttatgtgtctaaatgtgaagaaatatttgatcttctagtt 23675564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 2 - 356
Target Start/End: Original strand, 22637061 - 22637415
Alignment:
Q  2 tgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaaca 101  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||||||||||||| ||||||    
T  22637061 tgttcgaaagaaattagatacacaatatcttagggacatggcgaaattagcagatagggttcaccaagtggaaagactcaaggctgaaaaagccagaaca 22637160  T
Q  102 aataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| ||||||||    
T  22637161 aataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagctagaattcgattggggttcagattctgtagaagataacgaaataa 22637260  T
Q  202 atctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatccccc 301  Q
    |||| | |||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| || |||||| ||||||||||||||||||||||    
T  22637261 atcttgtagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatccccc 22637360  T
Q  302 aaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22637361 aaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 22637415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 24910638 - 24910992
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||| || ||||| |||||||||||||| |||||    
T  24910638 ctgttcggaagaaattagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagtcgagagacttaaggctgaaaaagccagaac 24910737  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| || |||| |||||||    
T  24910738 aaataggttccctaagaaagaaaaagttgcttatgtcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggataacgaaata 24910837  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    |||||||| ||||||||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||| | || ||| | ||||||||||| |||| ||    
T  24910838 aatctcgcggaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaggaacctaaaaatgataagtatcacc 24910937  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 355  Q
    | ||||| || ||||| ||||| |||||||||||||| || ||||||||| ||||    
T  24910938 cgaaaacatacactttcgatgtatctaaatgtgaagagatttttgatcttctagt 24910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 23815646 - 23816000
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||| |||||| || ||||| || || ||||| || ||||| || || ||||| |||||||| ||||| |||||||| |||||||||||| |  | ||    
T  23815646 ctgttctaaagaagttggatactcagtaccttagagatatggcacagttggcagacagagtccgacaagtcgaaagacttaaggctgaaaaaccccggac 23815745  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||| | |||||| || |  ||||||||||| || || || ||  | || ||||| | | ||| |||||  || ||  || |||| |||||||  ||| |     
T  23815746 aaacaagttccccaaaagggagaaagttgcctacatagacacaagagacagtgacccagaatacgattaagggtcatatactgtcgaagataatgaagtt 23815845  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| | ||||||||||||||| |  || ||  ||||||||||  |||||||||| ||||| ||||||   |||||| | ||||| || |||||||| |    
T  23815846 aatcttgtagaattaaaagatggaccgccctatgcttgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaacgacaaatatcctc 23815945  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 355  Q
      ||||| |||||||| ||||| |||||||||||||| || || ||||| |||||    
T  23815946 ttaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatctcttagt 23816000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 19118972 - 19118882
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 94  Q
    ||||||||||||||||||| || ||||| || || ||||| ||||||||||||||| |||| ||||| |||||||  || |||||||||||    
T  19118972 ttcgaaagaaattagatacgcagtatctaagagatatggcacaattagcagatagaatccgacaagtcgaaagacataaagctgaaaaagc 19118882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 25117607 - 25117532
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagact 79  Q
    ||||||||||||||||||| || ||||| || || ||||  ||| |||||||||||||||| ||||| ||||||||    
T  25117607 ttcgaaagaaattagatactcagtatctaagagatatggtacaactagcagatagagtccgacaagtcgaaagact 25117532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 18173085 - 18172730
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  18173085 ctgttcgaaagaaagtagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagttgaaagactcaaggctgaaaaagctagaac 18172986  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  18172985 aaataggttccctaagaaagagaaagttgcttatatcgatactgaggatagtgagccagaattcgattggggttcagattctgtagaagataacgaaata 18172886  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||| ||||||||||  ||||||||||||||||| || |||||||||||||| ||||| || |||||| ||||||||||||| |||||||    
T  18172885 aatcttgcagaattgaaagatgggccgccttacacttgcaaattattgaggccatcaaatggaaaaaacgtagaagaacccaaaaatgataagtatcccc 18172786  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18172785 cgaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 18172730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 6 - 363
Target Start/End: Complemental strand, 14344103 - 14343746
Alignment:
Q  6 cgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaata 105  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  14344103 cgaaagaaattggatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaaagccaggacaaata 14344004  T
Q  106 ggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatct 205  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||| | | |||||||||||||||  |||||||| ||||||||||||||||||||    
T  14344003 ggttccctaagaaagaaaaagttgcttatatcgaaactggggatagtgaaccagaattcgattggggtttcgattctgtcgaagatagcgaaataaatct 14343904  T
Q  206 cgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaa 305  Q
    ||| |||||||||||||||| |||||||||||| ||| |||||||||||||||| || ||||| || |||||  |||||||||||||||||||||| |||    
T  14343903 cgcggaattaaaagatgggccaccttacacttgtaaaatgttaaggccatcaaacggaaaaaacgtagaagagcccaaaaatgataaatatccccccaaa 14343804  T
Q  306 acttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14343803 acttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctgatg 14343746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 356
Target Start/End: Original strand, 15763761 - 15764112
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||    
T  15763761 ttcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaaaagccagaacaaa 15763859  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaat 203  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| || |||| |||| |||||    
T  15763860 taggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggataacgaagtaaat 15763959  T
Q  204 ctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaa 303  Q
    |||||||||||||||||||| |  ||||| ||||| || ||  |||||||||  ||||| |||||| | |||||| | ||||||||||| ||||||||||    
T  15763960 ctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgataagtatcccccaa 15764059  T
Q  304 aaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||| |||| ||||||||| |||||||||||||| || ||||||||| |||||    
T  15764060 aaacatatagttttgatgtatctaaatgtgaagagatttttgatcttctagtt 15764112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 11978372 - 11978017
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| || |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| |||||| || |||||||||||||| || ||    
T  11978372 ctgttcggaaaaaattagatacacaatatcttagggatatggcacaattagcagatagagtctgccaagctgaaaggcttaaggctgaaaaagccaggac 11978273  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| || |||||||||||||||||| | |||||||| | | ||||||||||||| ||||| ||||| || |||| |||||||    
T  11978272 aaataggttccctaagaaagaaaaggttgcttatatcgatactcgagatagtgatccagaattcgattggggatctgagtctgttgatgataacgaaata 11978173  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||   |||| ||||| || ||  ||||| |||||||||| |||||| |||||||| | |||||||||||||||||||    
T  11978172 aatcttgcagaattaaaagatgggccggcttatacttgtaagttactaaggtcatcaaatggaaaaaatctggaagaacctaaaaatgataaatatcccc 11978073  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | ||||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
T  11978072 cgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 11978017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 103 - 363
Target Start/End: Complemental strand, 18134885 - 18134625
Alignment:
Q  103 ataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaa 202  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||| | | |||||||||||||  ||||| || || ||||||||| ||||    
T  18134885 ataggttccctaagaaagaaaaagttgcttatatcgaagctggggatagtgagccagagttcgattggggtttcgattccgtcgaggatagcgaagtaaa 18134786  T
Q  203 tctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatccccca 302  Q
    ||||||  |||||||||||||||  ||||||||||| |||||||||||||||||||| || ||||| || ||||| ||||||||||||||||||||||||    
T  18134785 tctcgcgaaattaaaagatgggccgccttacacttgtaaattgttaaggccatcaaacggaaaaaacgtagaagagtccaaaaatgataaatatccccca 18134686  T
Q  303 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18134685 aaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgctgatg 18134625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 18140003 - 18139895
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||    
T  18140003 ctgttcgaaagaaattagatacacaataccttagagacatggcacaattagcagatagagtccgccaagttgaaagactcaaagctgaaaaagccaggac 18139904  T
Q  101 aaataggtt 109  Q
    |||||||||    
T  18139903 aaataggtt 18139895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 37344 - 37699
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||||| |||||    
T  37344 ctgttcgaaagaaattagatacacaatatcttagggacatagcgcaattagcagatagggttcgccaagtcgaaagactcaaggctgaaaaagccagaac 37443  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||| ||||  |||||||||| |||||||    
T  37444 aaataggttccttaagaaagagaaacttgcttatatcgatattggggatagtgagccagaattcgattggggttcagatttagtagaagataacgaaata 37543  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||||||||||||||| || |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  37544 aatcttgcagaattaaaagatgggccgccttacacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatcccc 37643  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37644 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 37699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 23433840 - 23434201
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||| |||||    
T  23433840 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagtagatagggttcgccaagtcgaaagactcaaggctgaaaaagccagaac 23433939  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
     ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||||||||||||| |||| ||||||||||| |||||||    
T  23433940 gaataggttccctaagaaagagaaagttgcttatattgatactggg-atagtgagccagaattcgattggggttcagattatgtagaagataacgaaata 23434038  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  |||| |||||||||||| || |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  23434039 aatcttgcagaattaaaagatgggccgcctttcacttgcaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatcccc 23434138  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  23434139 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtttatgatg 23434201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 4 - 363
Target Start/End: Complemental strand, 19036625 - 19036267
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||| |||||||||||||| ||||||||    
T  19036625 ttcgaaagaaattagatacacaatatcatagggacatggcgcaattagcagatagagttcgccaagtcgagagacttaaggctgaaaaagccagaacaaa 19036526  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaat 203  Q
    ||| |||||||||||||||||| |||||||||| |||||||| |||||||||| | ||||||||||||| || |||||||||||||||| ||||||||||    
T  19036525 tagattccctaagaaagagaaatttgcttatatagatactggagatagtgagccagaattcgattggggatcagattctgtagaagataacgaaataaat 19036426  T
Q  204 ctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaa 303  Q
    || |||||||||||||||||||  ||||||||||| |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  19036425 cttgcagaattaaaagatgggccgccttacacttgtaaattgttaaggcc-tcaaatgggaaaaatgtagaagaacccaaaaatgataaatatcccccaa 19036327  T
Q  304 aaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||    
T  19036326 aaacttatacttttaatgtgtctaaatgtgaagaaatatttgatcttctagttgctgatg 19036267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 4 - 356
Target Start/End: Complemental strand, 1552614 - 1552263
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||    
T  1552614 ttcgaaagaaactagatacacaatatcttagggatatggcacaattagcagatagagtccgcca-gttgagagacttaaggctgaaaaagccagaacaaa 1552516  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaat 203  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| || |||| |||| |||||    
T  1552515 taggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaggataacgaagtaaat 1552416  T
Q  204 ctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaa 303  Q
    |||||||||||||||||||| |  ||||| ||||| || ||  |||||||||  ||||| |||||| | |||||| | ||||||||||| ||||||||||    
T  1552415 ctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccattgaatggaaaaaatatagaagaacctaaaaatgataagtatcccccaa 1552316  T
Q  304 aaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||| |||| ||||||||| |||||||||||||| || ||||||||| |||||    
T  1552315 aaacatatagttttgatgtatctaaatgtgaagagatttttgatcttctagtt 1552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 16211728 - 16211959
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| || ||||  || |||||||| || |||||    
T  16211728 ctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacataaagctgaaaaggccagaac 16211827  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||| | |||||||    
T  16211828 aaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagaaaacgaaata 16211927  T
Q  201 aatctcgcagaattaaaagatgggcaacctta 232  Q
    ||||||||||||||||| ||||||| ||||||    
T  16211928 aatctcgcagaattaaaggatgggccacctta 16211959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 172
Target Start/End: Complemental strand, 19270601 - 19270432
Alignment:
Q  3 gttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaa 102  Q
    |||||||||||  | ||||| ||||| |||||||| ||||| ||||||||||||| ||| || ||||| ||||| || |||||||| |||||  ||||||    
T  19270601 gttcgaaagaatatggatactcaataccttagggatatggcacaattagcagatatagttcgacaagtcgaaaggcttaaggctgagaaagcccgaacaa 19270502  T
Q  103 ataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattgggg 172  Q
    |||||||||| || |  ||||||||||| ||| | || || || || ||||| | | |||||||||||||    
T  19270501 ataggttcccaaaaagggagaaagttgcctatgtagacacaggagacagtgacccagaattcgattgggg 19270432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 17801935 - 17801880
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagataga 59  Q
    ||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||    
T  17801935 ttcgaaagaaattagatacgcagtatctaagggatatggcgcaattagcagataga 17801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 13290819 - 13290464
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||| || |||||    
T  13290819 ctgttcgaaagaaattagatacacaatatattagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaaggccagaac 13290720  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | | |||||||||||||||| ||||||| ||| |||| |||||||    
T  13290719 aaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgaaccagaattcgattggggttcagattctggagaggataacgaaata 13290620  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  13290619 aatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatcccc 13290520  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13290519 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 13290464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 363
Target Start/End: Complemental strand, 14774016 - 14773657
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||| || |||||||| |  ||||||||    
T  14774016 ttcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaaggtcagaacaaa 14773917  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaat 203  Q
    |||||||||||||||||| ||||| |||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||| ||||||||||    
T  14773916 taggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagataacgaaataaat 14773817  T
Q  204 ctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaa 303  Q
    || |||||||| || ||||||| |||||| ||||| || || ||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |    
T  14773816 cttgcagaattgaaggatgggccaccttatacttgtaacttattaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgataaatatcccccga 14773717  T
Q  304 aaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    ||| ||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
T  14773716 aaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 14773657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 18565254 - 18564918
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||| || || || ||||| ||||| || |||||  |  | ||||| |||||||| ||||| ||||| || ||||||||||||||  | ||    
T  18565254 ctgttcgaaagaagttggacactcaataccttagagatatggcatagctggcagacagagtccgacaagtcgaaaggcttaaggctgaaaaagcccggac 18565155  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    || || |||||||||||  ||||||||||| ||  | || |||||  | ||||| | | ||||||||||||| || ||| |||| |||||||  ||||||    
T  18565154 aagtaagttccctaagagggagaaagttgcctacgtagacactggaaacagtgacccagaattcgattgggggtcagatactgtcgaagataatgaaata 18565055  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| ||||||||||||||||| |  |  ||  | ||||||||  |||||||||| ||||| ||||||   |||||| | |||||||| |||||||| |    
T  18565054 aatcttgcagaattaaaagatggaccgctctatgcctgcaaattactaaggccatcgaatggaaaaaatcctgaagaacctaaaaatgacaaatatcctc 18564955  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaaga 337  Q
    | ||||| |||||||| ||||| ||||||||||||||    
T  18564954 ctaaaacatatactttcgatgtttctaaatgtgaaga 18564918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 17424306 - 17423944
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17424306 ctgttcgaaagaaattagatacacagtatcttagggacatggcgcaattagcagatagagtccgccaagtggaaagactcaaggctgaaaaagccagaac 17424207  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||    |||||||||| ||||||||||||    
T  17424206 aaataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccaaaattcgattggggtcacaattctgtagaggatagcgaaata 17424107  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||||||||||||||| ||| |||  ||||||| ||||||||| || ||||||||||| |||||||| || |||||  |||||||||| ||||||||||    
T  17424106 aatctcgcagaattaaaggataggccgccttacatttgcaaattattgaggccatcaaacgggaaaaacgtagaagagcccaaaaatgacaaatatcccc 17424007  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  17424006 caaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttttagttgctgatg 17423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 22350216 - 22349854
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||||| |||||    
T  22350216 ctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaaagccagaac 22350117  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||| ||| |||    
T  22350116 aaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagataacgagata 22350017  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||| ||||| || || |||||||||| |||||| ||||| || ||||| ||||||||||||||||||||||    
T  22350016 aatcttgcagaattaaaagatgggccgccttatacttgtaagttattaaggccataaaatggaaaaaacgtagaagagtccaaaaatgataaatatcccc 22349917  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  |||||| |||||    
T  22349916 caaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatctcctagttgctgatg 22349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 22066503 - 22066858
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||  | |||||||||||||| || ||    
T  22066503 ctgttcggaagaaattagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaaggtttaaggctgaaaaagccaggac 22066602  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||| |||||||| | | ||||||||||||| ||| | ||||| || |||| |||||||    
T  22066603 aaataggttccctaagaaagaaatggttgcttatatagatactggagatagtgatccagaattcgattggggatctaaatctgttgatgataacgaaata 22066702  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||||||||||||||||||||||| |||||| ||||| || ||  |||||||||||||||| |||||| | |||||| | |||||||||||||||||||    
T  22066703 aatctcgcagaattaaaagatgggccaccttatacttgtaagttactaaggccatcaaatggaaaaaatctagaagaacctaaaaatgataaatatcccc 22066802  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | | ||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
T  22066803 cgataacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 22066858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 363
Target Start/End: Original strand, 15913038 - 15913241
Alignment:
Q  160 aattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaa 259  Q
    ||||||||| ||| || ||| |||| |||||||  || || |||||||||||||||||||||||||  | |||  | || ||| ||||||||||||| ||    
T  15913038 aattcgattagggatcagatactgtcgaagataatgagattaatctcgcagaattaaaagatgggcctctttatgcatgtaaactgttaaggccatcgaa 15913137  T
Q  260 tgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgat 359  Q
    ||| ||||||   |||||| | || ||||| ||||| || || ||||| ||||  |||||||| ||||| || || ||||| ||||||||||| |||| |    
T  15913138 tggaaaaaatcctgaagaaccaaagaatgacaaataccctcctaaaacatatatctttgatgtttctaagtgcgaggaaatctttgatcttttggttgct 15913237  T
Q  360 gatg 363  Q
    ||||    
T  15913238 gatg 15913241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 16138 - 16493
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||| |||||    
T  16138 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgaaagactcaaggctgaaaaagccagaac 16237  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| | |||||| ||||||||| ||||||||||| |||| ||| |||    
T  16238 aaataggttccctaataaagagaaagttgcttatatcgatactggtgattgtgagccagaattcgtttggggttcagattctgtagatgataacgatata 16337  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| ||||| |||||||||||||||    
T  16338 aatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaacatgataaatatcccc 16437  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16438 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttctagtt 16493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 4 - 356
Target Start/End: Original strand, 4319 - 4671
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| || ||||| |||||||||||||| ||||||||    
T  4319 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagacagggttcgccaagtcgagagacttaaggctgaaaaagccagaacaaa 4418  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaat 203  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||| ||||||||||    
T  4419 taggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgtggaagataacgaaataaat 4518  T
Q  204 ctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaa 303  Q
    || |||||||||||||||||||  |||||||| || ||||||||||||||||||||||| ||||| || |||||||||||||||| ||||||||||||||    
T  4519 cttgcagaattaaaagatgggccgccttacacctgtaaattgttaaggccatcaaatggaaaaaacgtagaagaatccaaaaatgttaaatatcccccaa 4618  T
Q  304 aaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||| |||||    
T  4619 aaacttatacttttgatgtatctaagtgtgaagagatatttgatcttctagtt 4671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 28423 - 28775
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||   |||       ||||||  ||| ||| |||||||||||||| |||||    
T  28423 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattag---ata-------ccaagtcaaaaaacttaaggctgaaaaagccagaac 28512  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||| |||||||||||||||| |||||||    
T  28513 aaataggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccagaattcgattggggttcagattctgtagaagataacgaaata 28612  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||| || |||||||||||||||||||| || |||||| |||||||||||||||||||||    
T  28613 aatcttgcagaattaaaagatgggccgccttacacttgtaaattattgaggccatcaaatgggaaaaacgtagaagaacccaaaaatgataaatatcccc 28712  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||    
T  28713 caaaaacttatacttttgatgtgtctaaatgtgaagagatatttgatcttctagttgctgatg 28775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 235; Significance: 1e-130; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 355
Target Start/End: Original strand, 21509732 - 21510086
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| || |||||||| || ||||| |||||||||||||| |||||    
T  21509732 ctgttcgaaagaaattagatacataatatcttagggacatggcacaattagcagatagggttcgccaagtcgagagacttaaggctgaaaaagccagaac 21509831  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||| |||||||| ||||||| ||| |||    
T  21509832 aaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctgttgaagataacgagata 21509931  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  | ||||||||| ||||| ||||||||||||||||||||||| || |||||  |||||||||||||||||||||    
T  21509932 aatcttgcagaattaaaagatgggccgctttacacttgtaaattattaaggccatcaaatgggaaaaacgtagaagagcccaaaaatgataaatatcccc 21510031  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 355  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  21510032 caaaaacttatacctttgatgtatctaaatgtgaagaaatatttgatcttctagt 21510086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 26272296 - 26271951
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| || ||||| |||||||||||||| |||||    
T  26272296 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagggtttgccaagtcgagagacttaaggctgaaaaagccagaac 26272197  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||| | |||||||||||||||| |||||| | || |||| ||| |||    
T  26272196 aaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagcgagccagaattcgattggggttcagattctattgaggataacgagata 26272097  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||| ||||||||||||  ||||||||||| |||||||| |||||||||||||||||||| || |||||  ||||||| |||||||||||||    
T  26272096 aatcttgcagaactaaaagatgggccgccttacacttgtaaattgttgaggccatcaaatgggaaaaacgtagaagagcccaaaaa-gataaatatcccc 26271998  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgat 347  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  26271997 caaaaacttatacttttgatgtatctaaatgtgaagaaatatttgat 26271951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 22853690 - 22853604
Alignment:
Q  8 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 94  Q
    ||||||||||||||| || ||||| || || ||| | ||| ||||||||||| |||| |||||||||||||| || |||||||||||    
T  22853690 aaagaaattagatactcagtatctaagagatatgacacaactagcagatagactccgacaagttgaaagacttaaagctgaaaaagc 22853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 23658376 - 23658466
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 94  Q
    ||||||| ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||||  |||||||| || |||||||||||    
T  23658376 ttcgaaataaattagatacgcagtatctaagagatatggcacagttagcagatagagtccgacaagccgaaagacttaaagctgaaaaagc 23658466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 23800194 - 23800104
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 94  Q
    ||||||| ||||||||||| || ||||| || || ||||| || ||||||||||||||||| ||||  |||||||| || |||||||||||    
T  23800194 ttcgaaataaattagatacgcagtatctaagagatatggcacagttagcagatagagtccgacaagccgaaagacttaaagctgaaaaagc 23800104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 25557181 - 25557313
Alignment:
Q  7 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 106  Q
    ||||||||||||| || | |||| | | ||||||||  ||||| ||||||| ||| |  |||||||| || ||||| |||||||| ||||| |||| ||     
T  25557181 gaaagaaattagacactcgatatttaatggacatggtccaattggcagataaagttcaacaagttgagaggctcaaagctgaaaaggctaggacaagtaa 25557280  T
Q  107 gttccctaagaaagagaaagttgcttatatcga 139  Q
     | || ||| |||||||| ||||||||| ||||    
T  25557281 ataccataaaaaagagaaggttgcttatgtcga 25557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 128174 - 127813
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||| |||||||||||||| |||||    
T  128174 ctgttcgaaagaaattagatacacaatatcttagggacatggtgcaattagcagatagggttcgccaagtcgagagacttaaggctgaaaaagccagaac 128075  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || |||| ||| |||||||  || |||    
T  128074 aaataggttccctaacaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagattttgttgaagataatgagata 127975  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||  ||||||||||| || |  ||||||||||||||||||||||| || ||||| |||||||||||| |||||||||    
T  127974 aatcttgcagaattaaaagatgggccgccttacacttgtaagtcattaaggccatcaaatgggaaaaacgtagaagagtccaaaaatgat-aatatcccc 127876  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||    
T  127875 caaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagttgctgatg 127813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 22807289 - 22806927
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||| || |||||||| || ||||| || |||||||| || |||||    
T  22807289 ctgttcaaaagaaattagatacacagtatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaaggccagaac 22807190  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||| |||||||||| ||||||||||||||| || |||||||| ||||||| |||||||    
T  22807189 aaataggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccaaaattcgattggggatccgattctgttgaagataacgaaata 22807090  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||| |||||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||    
T  22807089 aatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgataaatatcccc 22806990  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    | |||||||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
T  22806989 cgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 22806927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 6 - 357
Target Start/End: Complemental strand, 41381770 - 41381419
Alignment:
Q  6 cgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaata 105  Q
    ||||||||||| ||||||||||| ||||| |||||||| ||||||||| |||| ||||||||||| |||||||||||||||||||| || || |||||||    
T  41381770 cgaaagaaattggatacacaataccttagagacatggcacaattagcaaatagggtccgccaagtggaaagactcaaggctgaaaaggccaggacaaata 41381671  T
Q  106 ggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatct 205  Q
    |||||||||||||||| ||||||||||| ||||| |||||||||||||||| | |||||||||||||||   |||| || || ||||||||| |||||||    
T  41381670 ggttccctaagaaagataaagttgcttacatcgaaactggggatagtgagccagaattcgattggggtttcaattccgttgaggatagcgaagtaaatct 41381571  T
Q  206 cgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaa 305  Q
    ||| || |||||||| ||||  |||||||||| |||||| ||||||| |||||| ||||||||||| |||||  ||||||| ||||||||||||||||||    
T  41381570 cgcggagttaaaagaggggccgccttacactttcaaattattaaggcaatcaaacgggaaaaatgtagaagagcccaaaaacgataaatatcccccaaaa 41381471  T
Q  306 acttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttg 357  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  41381470 acttatacttttgatgtatctaaatgcgaagaaatatttgatcttttagttg 41381419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 355
Target Start/End: Complemental strand, 21166535 - 21166246
Alignment:
Q  66 caagttgaaagactcaaggctgaaaaagctagaacaaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcg 165  Q
    ||||| ||||| || |||||||| |||||  | | |||||| ||||||||||| ||||||||||| ||| | ||||| || || ||||| | | ||||||    
T  21166535 caagtcgaaaggcttaaggctgagaaagcccggagaaatagattccctaagaaggagaaagttgcctatgtggataccggagacagtgatccagaattcg 21166436  T
Q  166 attggggttctgattctgtagaagatagcgaaataaatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaa 265  Q
    ||||||| || ||| |||| |||||||  ||||||||||||||||||||||||||||||| |||||| || |||||||| ||||||||||||||||| ||    
T  21166435 attgggggtcagatactgtcgaagataatgaaataaatctcgcagaattaaaagatgggccaccttatacctgcaaattattaaggccatcaaatggcaa 21166336  T
Q  266 aaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 355  Q
    |||    |||||| | |||||||| |||||||| || ||||| ||||| |||||||| |||||||||||||| || || |||||||||||    
T  21166335 aaaccatgaagaacctaaaaatgacaaatatcctccgaaaacatatacctttgatgtttctaaatgtgaagagatcttcgatcttttagt 21166246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 24950 - 25305
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||  || |||||||| |||||||| ||||||||||| || |||||    
T  24950 ctgttcgaaagaaattagacacccaatatcttagggacatggcgcaattagcagataaggttcgccaagtcgaaagacttaaggctgaaaaggccagaac 25049  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||| | ||||||||||||| || |||||||||||||||| |||||||    
T  25050 aaataggttccttaagaaagagaaagtcgcttatatcgatactagagatagtgagccagaattcgattggggatcagattctgtagaagataacgaaata 25149  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| || ||||| |||||||||| |||||||||||| ||| | || |||||||| || |||||||| || || ||| ||||||| |||||||||||||    
T  25150 aatcttgcggaattgaaagatgggccaccttacacttgtaaagtattgaggccatcgaacgggaaaaacgtagaggaacccaaaaacgataaatatcccc 25249  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
T  25250 caaaaacttaaacttttgaagtgtctaaatgcgaagaaatatttgatcttctagtt 25305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 208; Significance: 1e-114; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 64074 - 64429
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||||| |||||    
T  64074 ctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaaagccagaac 64173  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || || ||||   |||||| ||| |||    
T  64174 aaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagataacgagata 64273  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||   |||| ||||| || || ||||||||||||| ||| ||||| || ||||| | ||||||||||||||||||||    
T  64274 aatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgataaatatcccc 64373  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  64374 caaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagtt 64429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 73252 - 73607
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || |||||||| || ||||| |||||||||||||| |||||    
T  73252 ctgttcgaaagaaattagatacacaatatcttagggatatggcgcagttagcagatagggttcgccaagtcgagagacttaaggctgaaaaagccagaac 73351  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||| | ||||||||||||| || || ||||   |||||| ||| |||    
T  73352 aaataggttcccttagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattggggatcagactctgcttaagataacgagata 73451  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||||||||||||||   |||| ||||| || || ||||||||||||| ||| ||||| || ||||| | ||||||||||||||||||||    
T  73452 aatcttgcagaattaaaagatgggccggcttatacttgtaagttattaaggccatcaagtggaaaaaacgtagaagagttcaaaaatgataaatatcccc 73551  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  73552 caaaaacttatacttttgatgtatctaaatgtgaagaaatatttgatcttctagtt 73607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4867 - 4723
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| ||||| |||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  4867 ctgttcggaagaagttagatacacaataccttagggatatggcacaattagtagatagagtccgccaagttgagagacttaaggctaaaaaagctagaac 4768  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactgg 145  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||    
T  4767 aaattggttccctaagaaagaaaaagttgcttatatcgacactgg 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 4 - 363
Target Start/End: Original strand, 65714 - 66073
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||| || |||||||| |  ||||||||    
T  65714 ttcgaaagaaattagatacacaatatcttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaaagctgaaaaggtcagaacaaa 65813  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaat 203  Q
    |||||||||||||||||| ||||| |||||| |||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||| ||||||||||    
T  65814 taggttccctaagaaagaaaaagtcgcttatgtcgatactggagatagtgagccagaattcgattggggatccgattctgttgaagataacgaaataaat 65913  T
Q  204 ctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaa 303  Q
    || |||||||| || ||||||| |||||| ||||| || || ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||| |    
T  65914 cttgcagaattgaatgatgggccaccttatacttgtaatttattaaggccatcaaatggaaaaaacgtagaagaatctaaaaatgataaatatcccccga 66013  T
Q  304 aaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    ||| ||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
T  66014 aaatttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 66073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 140414 - 140060
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||| || |||||||| || ||||| ||| ||||||| || |||||    
T  140414 ctgtttgaaagaaattagatacacaataccttagggatatggcgcaattagcagatagggttcgccaagtcgagagacttaagtctgaaaaggccagaac 140315  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| | ||||||||||||| || |||||||| ||||||| |||||||    
T  140314 aaataggttccctaagaaagaaaaaattgcttatatcgatactggagatagtgagccagaattcgattggggatcagattctgttgaagataacgaaata 140215  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| ||||||||||| |||||||  ||||| ||||| ||  |  |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  140214 aatcttgcagaattaaaggatgggccgccttatacttgtaagctactaaggccatcaaatgggaaaaacgtagaagaatccaaaaatgataaatatcccc 140115  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 355  Q
    | ||||| || ||||| ||||| ||||||||||||||||| ||||||||| ||||    
T  140114 cgaaaacgtacactttcgatgtatctaaatgtgaagaaatttttgatcttctagt 140060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0656 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 3784 - 4139
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||||| ||||||| |||||||||||||||||||||| ||||| || |||||||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  3784 ctgttccaaagaaactagatacacaatatcttagggatatggcacagttagcagatagagttcgccaagttgagagacttaaggctgaaaaagccagaac 3883  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| | ||||||||||| | || |||||||| || |||| |||||||    
T  3884 aaataggttccctaagaaagaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggtgatcagattctgttgatgataacgaaata 3983  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||||||||||||||||||||| |  ||||| ||||| || ||  |||||||||| |||||||||||| | |||||| | ||||||||||| |||||||    
T  3984 aatctcgcagaattaaaagatggaccgccttatacttgtaagttactaaggccatcgaatgggaaaaatttagaagaacctaaaaatgataagtatcccc 4083  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | ||||| |||||||||||||| |||||||||||||| || ||||||||| |||||    
T  4084 cgaaaacatatacttttgatgtatctaaatgtgaagagatttttgatcttctagtt 4139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 39044 - 38690
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||| |  |||||    
T  39044 ctgttcgaaagaa-ttagacacccaatatcttagggacatggcgcaattagcagatagggttcgccaagtcgaaagacttaaggctgaaaaggacagaac 38946  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| | ||||||||||||| || |||| ||||||||| | |||||||    
T  38945 aaataggttccctaagaaagagaaagtcgcttatatcgatactggagatagtgagccagaattcgattggggatcagattatgtagaagacaacgaaata 38846  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| || ||| | |||||||||| |||||||||||| ||| | || |||||||| ||| ||||||| || || ||| ||||||| |||||||||||||    
T  38845 aatcttgcggaactgaaagatgggccaccttacacttgtaaagtattgaggccatcgaattggaaaaacgtagaggaacccaaaaacgataaatatcccc 38746  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||||||| |||||    
T  38745 caaaaacttacacttttgacgtgtctaaatgcgaagaaatatttgatcttctagtt 38690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 183; Significance: 6e-99; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 6990 - 6628
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||  | |||||||| || ||||| || |||||||| || |||||    
T  6990 ctgttcgaaagaaattagatacacagtatcttagggatatggcgcaattagtagataggattcgccaagtcgagagacttaaagctgaaaaggccagaac 6891  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||| |||||| |||| | ||| |||||||||| | ||||| ||||||| ||  ||||||| ||||||| |||||||    
T  6890 aaataggttccctaagaaagaaaaagtcgcttatgtcgacattggagatagtgagccagaattcaattggggatccaattctgttgaagataacgaaata 6791  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| |||||||| |||||||||| |||||| ||||| || || ||||||| ||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  6790 aatcttgcagaattgaaagatgggccaccttatacttgtaagttattaaggctatcaaatggaaaaaacgtagaagaatctaaaattgataaatatcccc 6691  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagttgatgatg 363  Q
    | |||||||||||||| ||||| || |||||||||||||||||||||||| |||||| |||||    
T  6690 cgaaaacttatactttcgatgtatccaaatgtgaagaaatatttgatcttctagttgctgatg 6628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 180; Significance: 4e-97; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 3845 - 4200
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||| | |||    
T  3845 ctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcagatagagtccgccaagttgaaagacttaaggctaaaaaagccaaaac 3944  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||| | ||||||||||||||||||||| | |||||||||| | ||||||||||||| ||||||| ||| || |||| |||||||    
T  3945 aaataggttccctaagaaacaaaaagttgcttatatcgatactagagatagtgagccagaattcgattggggatctgattatgttgatgataacgaaata 4044  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||||||||||||||||||||| |  ||||| ||||| || ||  || ||||||||||||| |||||| | |||||| | || ||||||| ||||||||    
T  4045 aatctcgcagaattaaaagatggaccgccttatacttgtaagttactacggccatcaaatggaaaaaatatagaagaacctaagaatgatacatatcccc 4144  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | ||||| || ||||||||||| |||||||| ||||| || ||||||||| |||||    
T  4145 cgaaaacatacacttttgatgtatctaaatgcgaagagatttttgatcttctagtt 4200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 180; Significance: 4e-97; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 160518 - 160163
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||| |||||| || ||||| || || |||||||| |||||    
T  160518 ctgttcgaaagaagttagatacacaatatcttagggatatgacacaattagcatatagagtccaccaagtcgagagacttaaagcagaaaaagccagaac 160419  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| | ||||| ||||||| || |||||||| || |||| |||||||    
T  160418 aaataggtttcctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcaattggggatcagattctgttgatgataacgaaata 160319  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    |||||||||||||||||||||||||  ||||| ||||| || ||  |||||||||| |||||||||||| |  ||||| | |||||||||||||||||||    
T  160318 aatctcgcagaattaaaagatgggccgccttatacttgtaagttactaaggccatcgaatgggaaaaatataaaagaacctaaaaatgataaatatcccc 160219  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | ||||| || ||||||| ||| |||||||||||||| || ||||||||| |||||    
T  160218 cgaaaacatacacttttgctgtatctaaatgtgaagagatttttgatcttctagtt 160163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 32494 - 32791
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||| || || |||||| |||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||| ||||||||||| || |||||    
T  32494 ctgttcgcaaaaagttagatgcacaatatcttagggatatggcacaattagcagatag-gtcctccaagttgaaagacttaaggctgaaaaggccagaac 32592  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| | ||||||||| ||| ||||||||||| || |||| |||||||    
T  32593 aaataggttccctaagaaagaaaaagttgcttatatcgatactggagatagtgagccagaattcgattagggatctgattctgttgatgataacgaaata 32692  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatccc 299  Q
    ||||||| |||||||||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||| | |||||| | || |||||||||||||||    
T  32693 aatctcgtagaattaaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatatagaagaacctaagaatgataaatatccc 32791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 289 - 461
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  289 ctgttcgaaagaaattagatacaaaatatcttagggacatggcgcaattagcagatagagttcgccaagtggaaagactcaaggctgaaaaagccagaac 388  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggt 173  Q
    | |||||||||| |||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||    
T  389 agataggttccccaagaaagaaaaagttgcttatatcgatactggggatagtgaaccagaattcgattggggt 461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 356
Target Start/End: Complemental strand, 180755 - 180400
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    |||| |||||||| || || || |||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||| || || |||||||| || || ||    
T  180755 ctgtccgaaagaagttggacactcaatatcttagggatatggcacaattggcaaatagagtccgacaagttgaaaggcttaaagctgaaaaggccaggac 180656  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||| ||||||||||| ||||||||||||||  | |||||||| || |||||   | |||||||||||||||| ||| |||| ||||||| ||| |||    
T  180655 aaatagattccctaagaaggagaaagttgcttacgtagatactggtgacagtgacgcataattcgattggggttccgatactgtcgaagataacgagata 180556  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||||||||||||||||||||||| ||| || || ||||| || ||||||||||||||||| |||||    |||||| | || ||||| |||||||| |    
T  180555 aatctcgcagaattaaaagatgggccaccatatacctgcaagttattaaggccatcaaatggaaaaaacccagaagaaccaaagaatgacaaatatcctc 180456  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | ||||| || ||||| ||||| |||||||| ||||| || ||||||||| |||||    
T  180455 ctaaaacatacactttcgatgtttctaaatgcgaagagatctttgatcttctagtt 180400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 290
Target Start/End: Original strand, 13226 - 13501
Alignment:
Q  15 ttagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaataggttcccta 114  Q
    |||||||||||| |||||||||| ||||| ||||| |||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||    
T  13226 ttagatacacaacatcttagggatatggcacaattggcagatagagtccgccaagttgaaaggcttaaggctgaaaaagccaggacaaataggttcccta 13325  T
Q  115 agaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaatt 214  Q
    ||||||| || ||||||||||||||  |||| |||||||| | | |||| |||||||| || ||  | || || |||| | ||||||||||||| |||||    
T  13326 agaaagaaaaggttgcttatatcgacgctggagatagtgatccagaatttgattggggatccgaggcggttgatgataacaaaataaatctcgccgaatt 13425  T
Q  215 aaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgat 290  Q
     ||||||||||  ||||| ||||| || ||  |||||||||||||||| |||||||| |||||| |||||||||||    
T  13426 gaaagatgggccgccttatacttgtaagttactaaggccatcaaatggaaaaaatgtagaagaacccaaaaatgat 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 119; Significance: 1e-60; HSPs: 6)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 6 - 356
Target Start/End: Original strand, 146539 - 146889
Alignment:
Q  6 cgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaata 105  Q
    |||||||| || ||||| ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || ||||||||||| || || |||||||    
T  146539 cgaaagaagttggatacccaataccttagggatatggcataattggcagatagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaata 146638  T
Q  106 ggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatct 205  Q
    | |||||||||||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||| ||| || | ||||||| ||| ||||||||    
T  146639 gattccctaagaaagagaaagttgcttacattgatactggagacaatgacccataatttgattggggttccgatactctcgaagataacgagataaatct 146738  T
Q  206 cgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaa 305  Q
    |||||||||||||||||||| ||| || || ||  | ||  |||||||||||||||| || ||    |||||| | || ||||| |||||||| || |||    
T  146739 cgcagaattaaaagatgggccaccatatacctgttagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgacaaatatcctcctaaa 146838  T
Q  306 acttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    || || ||||||||||| |||||||| ||||| || ||||||||| |||||    
T  146839 acatacacttttgatgtttctaaatgcgaagagatctttgatcttctagtt 146889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 356
Target Start/End: Original strand, 82529 - 82878
Alignment:
Q  7 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 106  Q
    ||||||| || ||||| ||||| |||||||| ||||| ||||| |||| ||||||||| ||||||||||| || ||||||||||| || || ||||||||    
T  82529 gaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaatag 82628  T
Q  107 gttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctc 206  Q
     ||||||| |||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||  ||| || |  |||||| ||| |||||||||    
T  82629 attccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagataacgagataaatctc 82728  T
Q  207 gcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaa 306  Q
    ||||||||||||||||||| ||| || || || || ||  |||||||||||||||| || ||    |||||| | || ||||| |||||||| || ||||    
T  82729 gcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgacaaatatcctcctaaaa 82828  T
Q  307 cttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | || || || ||||| |||||||| ||||| || ||| ||||| |||||    
T  82829 catacaccttagatgtttctaaatgcgaagagatctttcatcttctagtt 82878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 7 - 356
Target Start/End: Original strand, 120201 - 120550
Alignment:
Q  7 gaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaatag 106  Q
    ||||||| || ||||| ||||| |||||||| ||||| ||||| |||| ||||||||| ||||||||||| || ||||||||||| || || ||||||||    
T  120201 gaaagaagttggatacccaataccttagggatatggcacaattggcagttagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaatag 120300  T
Q  107 gttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctc 206  Q
     ||||||| |||||||||||||||||| || |||||||| || | ||| | | |||| ||||||||||  ||| || |  |||||| ||| |||||||||    
T  120301 attccctaggaaagagaaagttgcttacattgatactggagacaatgacccagaatttgattggggtttcgatactctcaaagataacgagataaatctc 120400  T
Q  207 gcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaa 306  Q
    ||||||||||||||||||| ||| || || || || ||  |||||||||||||||| || ||    |||||| | || ||||| |||||||| || ||||    
T  120401 gcagaattaaaagatgggccaccatatacctgtaagttactaaggccatcaaatggaaagaaccctgaagaaccaaagaatgacaaatatcctcctaaaa 120500  T
Q  307 cttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    | || || || ||||| |||||||| ||||| || ||| ||||| |||||    
T  120501 catacaccttagatgtttctaaatgcgaagagatctttcatcttctagtt 120550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 112 - 356
Target Start/End: Original strand, 147685 - 147929
Alignment:
Q  112 ctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcaga 211  Q
    |||||||||||||||||||||| || |||||||| || ||||| | | ||||||||| |||||| ||| || | ||||||| ||| ||||||||||||||    
T  147685 ctaagaaagagaaagttgcttacattgatactggagacagtgacccagaattcgattagggttccgatactctcgaagataacgagataaatctcgcaga 147784  T
Q  212 attaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttat 311  Q
    |||||||||||||| ||| || || || || ||  |||||||||||||||| |||||    |||||| | || ||||| |||||||| || ||||| ||     
T  147785 attaaaagatgggccaccatatacctgaaagttaataaggccatcaaatggaaaaaacccagaagaaccaaagaatgacaaatatcctcctaaaacatac 147884  T
Q  312 acttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    ||||| ||||| |||||||| ||||| || ||||||||| |||||    
T  147885 actttcgatgtttctaaatgcgaagagatctttgatcttctagtt 147929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 133294 - 133404
Alignment:
Q  6 cgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaata 105  Q
    |||||||| || ||||  ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || ||||||||||| || || |||||||    
T  133294 cgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaata 133393  T
Q  106 ggttccctaag 116  Q
    | |||||||||    
T  133394 gattccctaag 133404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 137823 - 137933
Alignment:
Q  6 cgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaata 105  Q
    |||||||| || ||||  ||||| |||||||| |||||  |||| |||||||||||||| ||||||||||| || ||||||||||| || || |||||||    
T  137823 cgaaagaagttggataaccaataccttagggatatggcaaaattggcagatagagtccgacaagttgaaaggcttaaggctgaaaaggccaggacaaata 137922  T
Q  106 ggttccctaag 116  Q
    | |||||||||    
T  137923 gattccctaag 137933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 4 - 185
Target Start/End: Original strand, 8632 - 8813
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaa 103  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||| | || ||||||||||| ||||||||    
T  8632 ttcgaaagaaattagatacacaatatcttagggacatggcgcagttagcagatagggttcgccaagtcgagagagttaatgctgaaaaagccagaacaaa 8731  T
Q  104 taggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgta 185  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||   ||||||||||||| || |||| ||||    
T  8732 taggttccctaagaaagagaaagttgcttatatcgatactggagatagtgagccggaattcgattggggatcagattttgta 8813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 118; Significance: 4e-60; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 15 - 356
Target Start/End: Complemental strand, 43717 - 43376
Alignment:
Q  15 ttagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaacaaataggttcccta 114  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||| | |||||  |||| || ||||| |||||||| || ||||||||||| |||     
T  43717 ttagatacacaatatcttagggatatggtacaattagcagatagagtctggcaagtcaaaagccttaaggccgaaaaagccaggacaaataggtttcctt 43618  T
Q  115 agaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaataaatctcgcagaatt 214  Q
    ||||||| || ||||||||||||| |||||| || || || | | ||||||||||||| |||||| |||| || |||| ||| |||||||| |||||||     
T  43617 agaaagaaaaggttgcttatatcgttactggagacagcgacccagaattcgattggggatctgatactgtcgatgataacgagataaatcttgcagaatc 43518  T
Q  215 aaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatact 314  Q
    |||||||||||  || || ||||| || ||  |||||||||||||||| || |||   |||||| | || |||||||||||||| |||||||| || |||    
T  43517 aaaagatgggccgccctatacttgtaagttactaaggccatcaaatggaaagaatcctgaagaagcaaagaatgataaatatcctccaaaaacatacact 43418  T
Q  315 tttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||| | |||||||| ||||| || ||||||||| |||||    
T  43417 tttgatttatctaaatgcgaagagatttttgatcttctagtt 43376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 355
Target Start/End: Complemental strand, 69119 - 68765
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||||||||||| || || || |||||||||||||| ||||| ||| | ||||| |||||||| ||||| ||||| || | |||||| |||||  | ||    
T  69119 ctgttcgaaagaagttggacactcaatatcttagggatatggcacaagtggcagacagagtccgacaagtcgaaaggcttatggctgagaaagcccggac 69020  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||| ||||||||||| || |||||||| ||  | ||||| || || | ||| | | ||||||||||||| || ||| |||| |||||||  ||||||    
T  69019 aaatagattccctaagaaggaaaaagttgcctacgtggataccggagacaatgacccataattcgattgggggtcagatactgtcgaagataatgaaata 68920  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||||||||| ||||||||||||| |||||| |  |||||||| ||||||||||||||||| |||||    |||||| | |||||||| |||||| | |    
T  68919 aatctcgcagagttaaaagatgggccaccttataactgcaaattattaaggccatcaaatggaaaaaaccctgaagaacctaaaaatgacaaatattctc 68820  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagt 355  Q
    | ||||| |||||||| ||||| |||||||||||||| || || |||||||||||    
T  68819 ctaaaacatatactttcgatgtttctaaatgtgaagagatcttcgatcttttagt 68765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 135035 - 134699
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagctagaac 100  Q
    ||||| ||||||| || || || |||||||||||||| || ||||| || ||||| |||| ||| ||||| ||||| || |||||||| |||||    ||    
T  135035 ctgtttgaaagaagttggacactcaatatcttagggatatagcgcagttggcagacagagcccgacaagtcgaaaggcttaaggctgagaaagcccagac 134936  T
Q  101 aaataggttccctaagaaagagaaagttgcttatatcgatactggggatagtgagcgaaaattcgattggggttctgattctgtagaagatagcgaaata 200  Q
    |||||||||||||||||| ||||||||| | ||  | ||||||||  | ||||| | | ||||||||||||| || ||| |||| |||||||  ||||||    
T  134935 aaataggttccctaagaaggagaaagtttcctaagtagatactggatacagtgacccagaattcgattggggatcagatactgttgaagataatgaaata 134836  T
Q  201 aatctcgcagaattaaaagatgggcaaccttacacttgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccc 300  Q
    ||||| ||||||||||||||||||| ||||||  | ||||||||  |||||||||| || || || |||   ||||||   |||||||| |||||||| |    
T  134835 aatcttgcagaattaaaagatgggccaccttatgcctgcaaattactaaggccatcgaacggaaagaatcctgaagaacttaaaaatgacaaatatcctc 134736  T
Q  301 caaaaacttatacttttgatgtgtctaaatgtgaaga 337  Q
    | ||||| |||||||| ||||| ||||||||||||||    
T  134735 ctaaaacatatactttcgatgtttctaaatgtgaaga 134699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 257 - 363
Target Start/End: Original strand, 10472 - 10578
Alignment:
Q  257 aaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaagaaatatttgatcttttagtt 356  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  10472 aaatggaaaaaatgtagaagagtccaaaaatgataaatatcccccaaaaacttatacttttgatgtatctaagtgtgaagaaatatttgatcttctagtt 10571  T
Q  357 gatgatg 363  Q
    | |||||    
T  10572 gctgatg 10578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1714 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1714
Description:

Target: scaffold1714; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1367 - 1445
Alignment:
Q  1 ctgttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagact 79  Q
    ||||||| || || ||||||||||||||||||||||| ||||| |||||||| |||||| |||||||||||||||||||    
T  1367 ctgttcggaaaaagttagatacacaatatcttagggatatggcacaattagcggatagaatccgccaagttgaaagact 1445  T

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Target: scaffold0757 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 1880 - 1954
Alignment:
Q  4 ttcgaaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagac 78  Q
    ||||||||||| ||||||| |||||||| || || ||||| |||||||| ||||||||||| |||||||||||||    
T  1880 ttcgaaagaaactagatacgcaatatctcagagatatggcacaattagctgatagagtccgacaagttgaaagac 1954  T

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Target: scaffold0401 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 1397 - 1483
Alignment:
Q  8 aaagaaattagatacacaatatcttagggacatggcgcaattagcagatagagtccgccaagttgaaagactcaaggctgaaaaagc 94  Q
    |||||||||||||||||||||||| || || ||||| |||||||| ||||| ||||  ||||| |||||||| || |||||||||||    
T  1397 aaagaaattagatacacaatatctaagagatatggcacaattagctgatagggtccaacaagtcgaaagacttaaagctgaaaaagc 1483  T

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Target: scaffold0401; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 357
Target Start/End: Original strand, 1626 - 1746
Alignment:
Q  237 tgcaaattgttaaggccatcaaatgggaaaaatgtggaagaatccaaaaatgataaatatcccccaaaaacttatacttttgatgtgtctaaatgtgaag 336  Q
    |||||| | |||| |||||| ||||| ||||||   || ||| | ||||||||||||||| |  | ||||| ||||| ||||||||  | |||||||| |    
T  1626 tgcaaagtattaaagccatctaatggcaaaaatcatgaggaacctaaaaatgataaatatgcatctaaaacatatacatttgatgttaccaaatgtgatg 1725  T
Q  337 aaatatttgatcttttagttg 357  Q
    |||| || |||||||||||||    
T  1726 aaatcttcgatcttttagttg 1746  T

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