View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16171_low_5 (Length: 356)
Name: NF16171_low_5
Description: NF16171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16171_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 3e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 154 - 321
Target Start/End: Original strand, 52626206 - 52626373
Alignment:
| Q |
154 |
actcttcatttctacggtcgttagctaataaataactcaaccttgtccatcattttcctttccaaacatcaacaactcgattatgttgtccttagttgaa |
253 |
Q |
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| T |
52626206 |
actcttcatttctacggtccttagctaataaataactcaaccttgtccatcattttcctttccaaacatcaacaactcgattatgttgtccttagttgaa |
52626305 |
T |
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| Q |
254 |
catattttcatcaatcaccttgcccacacaagctctgccttccacacatcttgaattgtattgttatt |
321 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
52626306 |
catattttcatcaatcaccttgcccgcacaagctctgccttccacacatcttgaattgtattgttatt |
52626373 |
T |
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