View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16172_low_32 (Length: 239)
Name: NF16172_low_32
Description: NF16172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16172_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 33049586 - 33049807
Alignment:
| Q |
1 |
tccttccgcatttcctccggcgccggtgctgattgctccggtgcataaacgaggagagatccgtcggagcatcctaagaggagtttggaaccgtaggatt |
100 |
Q |
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| T |
33049586 |
tccttccgcatttcctccggagccggtactgaatgctctggcgcataaacgaggagagatccgttggagcatcctaagaggagtttggaaccgtaggatt |
33049685 |
T |
|
| Q |
101 |
cgatggattcgattttggagggtgagtttgtgagaagctcgaaggaatcataagcagtgtgcaccattgttgagaaattgcattgacgagtgaaaatgga |
200 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33049686 |
cgatggattcgattttggaggttgagtttgtgagaagctcgaaggaatcataagcagtgtgcaccattgttgagaaattgcattgacgagtgaaaatgga |
33049785 |
T |
|
| Q |
201 |
aatttcaggaaacgatgtcgtt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
33049786 |
aatttcaggaaacgatgtcgtt |
33049807 |
T |
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