View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16172_low_7 (Length: 498)

Name: NF16172_low_7
Description: NF16172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16172_low_7
NF16172_low_7
[»] chr6 (44 HSPs)
chr6 (1-481)||(2732904-2733384)
chr6 (32-112)||(14399814-14399893)
chr6 (31-142)||(1912458-1912569)
chr6 (12-100)||(28640488-28640576)
chr6 (1-112)||(33532473-33532583)
chr6 (20-90)||(2457203-2457273)
chr6 (22-112)||(11602521-11602611)
chr6 (17-133)||(7939859-7939975)
chr6 (22-93)||(9163745-9163816)
chr6 (27-93)||(26373077-26373143)
chr6 (48-125)||(9074105-9074182)
chr6 (33-93)||(9194433-9194493)
chr6 (70-129)||(33282734-33282793)
chr6 (37-95)||(653351-653409)
chr6 (34-112)||(770343-770421)
chr6 (57-95)||(2231090-2231128)
chr6 (47-121)||(14933137-14933211)
chr6 (18-96)||(21869848-21869926)
chr6 (22-112)||(29243074-29243164)
chr6 (60-94)||(33735435-33735469)
chr6 (17-102)||(1906845-1906930)
chr6 (35-112)||(2766868-2766945)
chr6 (27-80)||(4886204-4886257)
chr6 (21-94)||(8432017-8432090)
chr6 (33-93)||(264555-264615)
chr6 (35-107)||(6012248-6012320)
chr6 (40-96)||(14933023-14933079)
chr6 (16-100)||(33996332-33996416)
chr6 (65-112)||(739704-739751)
chr6 (35-98)||(5730189-5730252)
chr6 (65-112)||(19390976-19391023)
chr6 (83-154)||(30532117-30532188)
chr6 (70-129)||(33260438-33260497)
chr6 (49-100)||(33851279-33851330)
chr6 (33-79)||(3736992-3737038)
chr6 (33-91)||(26494408-26494466)
chr6 (19-89)||(31322632-31322702)
chr6 (19-93)||(31694723-31694797)
chr6 (67-129)||(33386192-33386254)
chr6 (66-99)||(4354338-4354371)
chr6 (67-132)||(9075206-9075271)
chr6 (31-84)||(29404955-29405008)
chr6 (65-102)||(32392369-32392406)
chr6 (33-93)||(24769309-24769369)
[»] chr1 (38 HSPs)
chr1 (19-102)||(15606321-15606404)
chr1 (33-117)||(7347693-7347777)
chr1 (33-112)||(6025952-6026031)
chr1 (31-101)||(17473136-17473206)
chr1 (17-94)||(52517064-52517141)
chr1 (27-94)||(30882449-30882515)
chr1 (19-93)||(44417783-44417857)
chr1 (33-158)||(43391470-43391595)
chr1 (33-102)||(47847982-47848050)
chr1 (36-102)||(3240482-3240548)
chr1 (19-156)||(15794029-15794165)
chr1 (33-101)||(15955893-15955961)
chr1 (35-91)||(32868272-32868328)
chr1 (38-93)||(33651660-33651715)
chr1 (40-102)||(15592675-15592737)
chr1 (62-112)||(26161587-26161637)
chr1 (33-102)||(3950673-3950742)
chr1 (31-112)||(7991516-7991597)
chr1 (33-102)||(15923758-15923827)
chr1 (16-121)||(26360296-26360401)
chr1 (33-94)||(32721421-32721482)
chr1 (33-84)||(11766188-11766237)
chr1 (33-117)||(12764017-12764101)
chr1 (17-101)||(28067473-28067557)
chr1 (39-110)||(400901-400972)
chr1 (27-102)||(11049047-11049122)
chr1 (47-94)||(46331109-46331156)
chr1 (33-99)||(3335145-3335211)
chr1 (36-93)||(4541583-4541638)
chr1 (20-94)||(15190855-15190929)
chr1 (36-112)||(15364936-15365009)
chr1 (46-96)||(19392212-19392262)
chr1 (22-100)||(50322030-50322108)
chr1 (33-94)||(14643201-14643262)
chr1 (33-90)||(15956878-15956935)
chr1 (38-94)||(1880082-1880137)
chr1 (33-93)||(46937570-46937630)
chr1 (18-90)||(48432631-48432703)
[»] chr7 (38 HSPs)
chr7 (17-101)||(7245942-7246026)
chr7 (19-100)||(6894305-6894386)
chr7 (31-101)||(1110401-1110471)
chr7 (33-102)||(38774312-38774381)
chr7 (37-112)||(24942499-24942574)
chr7 (20-94)||(2219525-2219599)
chr7 (33-155)||(30900051-30900173)
chr7 (33-87)||(39417762-39417816)
chr7 (33-102)||(23747323-23747392)
chr7 (33-133)||(38921262-38921362)
chr7 (31-89)||(1109354-1109412)
chr7 (33-95)||(13380906-13380968)
chr7 (47-101)||(21451517-21451571)
chr7 (33-143)||(23218571-23218681)
chr7 (19-72)||(400623-400676)
chr7 (65-102)||(5260422-5260459)
chr7 (33-90)||(21450959-21451016)
chr7 (48-96)||(8095907-8095955)
chr7 (33-93)||(23117360-23117420)
chr7 (48-112)||(44124546-44124610)
chr7 (33-112)||(1662624-1662703)
chr7 (65-112)||(10455094-10455141)
chr7 (67-154)||(24673364-24673451)
chr7 (34-97)||(33007893-33007955)
chr7 (35-94)||(37233722-37233781)
chr7 (19-102)||(38622871-38622954)
chr7 (19-89)||(7982345-7982415)
chr7 (19-77)||(21343694-21343752)
chr7 (20-90)||(25268805-25268875)
chr7 (51-93)||(30885321-30885363)
chr7 (31-113)||(33581726-33581808)
chr7 (67-101)||(40869547-40869581)
chr7 (26-91)||(30408257-30408321)
chr7 (19-112)||(31838837-31838929)
chr7 (33-94)||(32231762-32231823)
chr7 (60-113)||(32888963-32889016)
chr7 (69-102)||(34925312-34925345)
chr7 (20-92)||(25314032-25314104)
[»] chr5 (39 HSPs)
chr5 (19-94)||(11257714-11257789)
chr5 (25-102)||(21047059-21047136)
chr5 (33-82)||(39647139-39647188)
chr5 (33-133)||(7430118-7430218)
chr5 (33-97)||(27731590-27731654)
chr5 (19-102)||(39159727-39159810)
chr5 (21-102)||(16973824-16973905)
chr5 (20-160)||(34156643-34156783)
chr5 (33-97)||(41894417-41894481)
chr5 (32-94)||(41015003-41015065)
chr5 (33-102)||(6202589-6202658)
chr5 (33-94)||(33342728-33342789)
chr5 (19-100)||(41991173-41991254)
chr5 (17-90)||(43283418-43283491)
chr5 (47-158)||(9446286-9446400)
chr5 (18-94)||(31029562-31029638)
chr5 (33-101)||(40677960-40678028)
chr5 (25-93)||(40990949-40991017)
chr5 (19-90)||(16033019-16033090)
chr5 (19-102)||(29466168-29466250)
chr5 (58-92)||(17855226-17855260)
chr5 (33-103)||(18551479-18551549)
chr5 (17-55)||(18839185-18839223)
chr5 (31-93)||(19115099-19115160)
chr5 (33-91)||(20981270-20981328)
chr5 (31-101)||(40213882-40213951)
chr5 (32-102)||(41376333-41376402)
chr5 (33-62)||(1792110-1792139)
chr5 (17-142)||(6586502-6586627)
chr5 (27-92)||(7477556-7477621)
chr5 (33-102)||(14956693-14956762)
chr5 (33-94)||(38346862-38346923)
chr5 (26-79)||(39647243-39647296)
chr5 (58-102)||(631483-631527)
chr5 (66-142)||(4787945-4788021)
chr5 (58-90)||(13996378-13996410)
chr5 (47-99)||(34451993-34452045)
chr5 (36-96)||(37056370-37056430)
chr5 (66-94)||(41399570-41399598)
[»] chr2 (37 HSPs)
chr2 (55-140)||(27317996-27318081)
chr2 (22-89)||(33958230-33958297)
chr2 (32-102)||(26174925-26174994)
chr2 (31-112)||(11530027-11530108)
chr2 (34-93)||(41631885-41631944)
chr2 (37-112)||(42616723-42616798)
chr2 (28-122)||(17442941-17443035)
chr2 (17-97)||(44458225-44458305)
chr2 (33-96)||(4204949-4205011)
chr2 (49-104)||(18569435-18569490)
chr2 (26-133)||(31790447-31790554)
chr2 (24-95)||(39597568-39597639)
chr2 (19-89)||(20547095-20547165)
chr2 (33-121)||(2045047-2045133)
chr2 (32-90)||(11328128-11328188)
chr2 (48-93)||(28044715-28044760)
chr2 (33-102)||(28804336-28804405)
chr2 (70-111)||(32321501-32321542)
chr2 (45-94)||(33971657-33971706)
chr2 (66-118)||(3110516-3110568)
chr2 (19-103)||(20265521-20265605)
chr2 (33-101)||(29378509-29378577)
chr2 (38-102)||(29728763-29728827)
chr2 (66-97)||(12749997-12750028)
chr2 (31-93)||(16733711-16733773)
chr2 (39-93)||(29415748-29415802)
chr2 (59-101)||(31235209-31235251)
chr2 (33-94)||(18104051-18104112)
chr2 (33-102)||(25694401-25694470)
chr2 (66-95)||(44460364-44460393)
chr2 (61-101)||(31246953-31246993)
chr2 (32-112)||(32562372-32562450)
chr2 (33-93)||(33623675-33623735)
chr2 (61-109)||(35538056-35538104)
chr2 (65-93)||(36300414-36300442)
chr2 (26-102)||(38475860-38475936)
chr2 (33-97)||(42172801-42172865)
[»] chr3 (34 HSPs)
chr3 (34-102)||(25252041-25252109)
chr3 (21-93)||(32251006-32251078)
chr3 (37-112)||(50402635-50402710)
chr3 (33-102)||(43381176-43381245)
chr3 (33-97)||(15802573-15802637)
chr3 (19-102)||(38692427-38692510)
chr3 (58-133)||(50251516-50251591)
chr3 (47-94)||(53855744-53855791)
chr3 (16-94)||(21754221-21754299)
chr3 (35-92)||(25490545-25490602)
chr3 (19-87)||(14199985-14200053)
chr3 (17-93)||(48236287-48236363)
chr3 (19-93)||(10275819-10275894)
chr3 (31-93)||(2990983-2991045)
chr3 (27-93)||(6994327-6994393)
chr3 (33-94)||(11338510-11338573)
chr3 (34-78)||(16169188-16169232)
chr3 (35-122)||(29279205-29279293)
chr3 (33-113)||(31386057-31386136)
chr3 (35-87)||(51295684-51295736)
chr3 (46-94)||(54842196-54842244)
chr3 (48-91)||(27016927-27016970)
chr3 (35-93)||(20690081-20690139)
chr3 (54-112)||(42064160-42064218)
chr3 (18-79)||(48198079-48198141)
chr3 (28-113)||(1813265-1813349)
chr3 (31-92)||(24830135-24830196)
chr3 (16-101)||(32954243-32954328)
chr3 (66-99)||(39544175-39544208)
chr3 (48-121)||(43307600-43307673)
chr3 (69-102)||(50376231-50376264)
chr3 (33-93)||(162903-162963)
chr3 (33-93)||(29208265-29208325)
chr3 (66-94)||(34363256-34363284)
[»] chr8 (39 HSPs)
chr8 (37-94)||(33120560-33120617)
chr8 (33-93)||(2302706-2302766)
chr8 (19-131)||(27483037-27483149)
chr8 (33-123)||(30560088-30560179)
chr8 (19-97)||(26273036-26273114)
chr8 (33-94)||(8282849-8282910)
chr8 (19-112)||(21226911-21227004)
chr8 (17-102)||(37632120-37632205)
chr8 (33-94)||(45371098-45371159)
chr8 (18-101)||(4050427-4050511)
chr8 (17-100)||(27400521-27400604)
chr8 (54-112)||(13869826-13869884)
chr8 (36-94)||(30692459-30692517)
chr8 (31-112)||(29749219-29749300)
chr8 (65-133)||(3556650-3556718)
chr8 (28-112)||(40710077-40710160)
chr8 (21-111)||(13850991-13851079)
chr8 (31-74)||(18737690-18737733)
chr8 (21-92)||(24855531-24855602)
chr8 (37-112)||(26445499-26445574)
chr8 (34-93)||(32616769-32616828)
chr8 (66-101)||(44617697-44617732)
chr8 (27-93)||(9112412-9112478)
chr8 (32-102)||(12196923-12196992)
chr8 (32-102)||(12441351-12441420)
chr8 (60-98)||(24857327-24857365)
chr8 (19-112)||(2701657-2701749)
chr8 (33-94)||(4114736-4114796)
chr8 (22-91)||(14928232-14928301)
chr8 (67-96)||(16950289-16950318)
chr8 (32-93)||(42843363-42843424)
chr8 (33-94)||(44806258-44806319)
chr8 (17-112)||(1318620-1318716)
chr8 (33-81)||(3238297-3238345)
chr8 (22-86)||(8284356-8284420)
chr8 (17-92)||(12856408-12856481)
chr8 (18-102)||(14730294-14730378)
chr8 (40-112)||(39550949-39551021)
chr8 (17-101)||(43935142-43935226)
[»] chr4 (44 HSPs)
chr4 (33-102)||(415145-415214)
chr4 (30-91)||(55314493-55314554)
chr4 (33-93)||(13298529-13298589)
chr4 (27-102)||(50794568-50794643)
chr4 (46-112)||(34581592-34581658)
chr4 (39-92)||(2843583-2843636)
chr4 (33-112)||(3301608-3301687)
chr4 (33-164)||(7295045-7295176)
chr4 (19-98)||(17223403-17223482)
chr4 (19-90)||(20709960-20710031)
chr4 (19-102)||(25402826-25402909)
chr4 (42-105)||(31675030-31675093)
chr4 (33-99)||(27722407-27722473)
chr4 (38-100)||(34417827-34417889)
chr4 (66-111)||(3144541-3144586)
chr4 (33-93)||(37538421-37538484)
chr4 (33-94)||(37579590-37579651)
chr4 (28-93)||(48244443-48244508)
chr4 (68-113)||(56049770-56049815)
chr4 (54-94)||(1202394-1202434)
chr4 (17-101)||(1276902-1276986)
chr4 (33-101)||(2562482-2562550)
chr4 (66-102)||(20989525-20989561)
chr4 (19-143)||(39032511-39032635)
chr4 (17-100)||(13458783-13458866)
chr4 (66-101)||(18968308-18968343)
chr4 (35-93)||(19062218-19062274)
chr4 (19-58)||(39064896-39064935)
chr4 (35-102)||(47789165-47789232)
chr4 (34-100)||(26275534-26275600)
chr4 (27-93)||(33714228-33714294)
chr4 (46-100)||(34417346-34417400)
chr4 (32-86)||(38596717-38596771)
chr4 (65-94)||(4762551-4762580)
chr4 (33-86)||(9318706-9318759)
chr4 (33-94)||(47486045-47486106)
chr4 (35-100)||(53768201-53768266)
chr4 (49-93)||(681986-682030)
chr4 (19-79)||(3625744-3625804)
chr4 (57-133)||(8721885-8721961)
chr4 (33-93)||(30617270-30617329)
chr4 (33-93)||(34416907-34416967)
chr4 (58-102)||(37854003-37854047)
chr4 (66-102)||(41367197-41367233)
[»] scaffold0428 (2 HSPs)
scaffold0428 (70-129)||(11459-11518)
scaffold0428 (70-129)||(4494-4553)
[»] scaffold0940 (1 HSPs)
scaffold0940 (18-100)||(2031-2113)
[»] scaffold0491 (1 HSPs)
scaffold0491 (31-74)||(4389-4432)
[»] scaffold0041 (1 HSPs)
scaffold0041 (67-101)||(96701-96735)
[»] scaffold0898 (1 HSPs)
scaffold0898 (33-94)||(534-594)
[»] scaffold0223 (1 HSPs)
scaffold0223 (33-164)||(10608-10740)
[»] scaffold0194 (1 HSPs)
scaffold0194 (33-101)||(13786-13854)


Alignment Details
Target: chr6 (Bit Score: 469; Significance: 0; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 1 - 481
Target Start/End: Original strand, 2732904 - 2733384
Alignment:
Q  1 atagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2732904 atagcggcattatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 2733003  T
Q  101 agaggcgctataatactattgtatagcggaattcaaacaaactactatcttctgcgattgacaacattgtatcacatacaatcagtaaaacagcccttaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2733004 agaggcgctataatactattgtatagcggaattcaaacaaactactatcttctgcgattgacaacaatgtatcacatacaatcagtaaaacagcccttaa 2733103  T
Q  201 tagtgaatatataaacacagattgtagcacggagatatctctaactttggccatcaaatgacacattgaccctttgaaaatggatcatgcaaagcttcca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733104 tagtgaatatataaacacagattgtagcacggagatatctctaactttggccatcaaatgacacattgaccctttgaaaatggatcatgcaaagcttcca 2733203  T
Q  301 acagaaataatgcaaagcaaagtttacaatatacactcattactatattctcacaagcatgtataccaatctttcaagaataaccagcagtgcataaagc 400  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733204 acagaaataatgcaaagcaaagtttacaatatacactcattaatatattctcacaagcatgtataccaatctttcaagaataaccagcagtgcataaagc 2733303  T
Q  401 aattttagatacttacaagcgtagagtacgtcctcttgcagattcaattgcttcaggttctgtaagatgtaataataaata 481  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2733304 aattttagatacttacaagcgtagagtacgtcctcttgcagattcaattgcttcaggttctgtaagatgtaataataaata 2733384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 14399814 - 14399893
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||| |||||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  14399814 aaatttaaacaaaccgctattgttttgtgata-gctatttagtacaaagtgttgtcaaatagcagctatagaggctctata 14399893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 1912569 - 1912458
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgga 130  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| | ||||||||||||  |||||| | |||||||  ||  ||| ||||||||    
T  1912569 gaaatttgaacaaatcgctattgttctgcgatatactatttagtacaaattattgtcaaatagcgactatagtgacgctatagcaccgttgcatagcgga 1912470  T
Q  131 attcaaacaaac 142  Q
    |||  |||||||    
T  1912469 atttgaacaaac 1912458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 28640488 - 28640576
Alignment:
Q  12 atagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||||| ||||||| |||||||||||||||| |||| ||||||| ||| ||| ||| ||| |||||||||| ||||||||||| |||||    
T  28640488 atagccgctatagcatagtgaaatttgaacagatcgatattgttctgcaatacgctgtttcgtacaaaatgctgtcaaatagcggctat 28640576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33532583 - 33532473
Alignment:
Q  1 atagcggcgttatagccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||||| |||||| |||||||||||    |||||||||||||||| ||||||   | ||| ||||||||||||| |||||||||||| |||||||||    
T  33532583 atagcggcgctatagc-actatagcgtaacagaatttgaacaaatcgccattgttacactatacgctatttagtacagaatgttgtcaaacagcagctat 33532485  T
Q  101 agaggcgctata 112  Q
    ||  ||||||||    
T  33532484 agttgcgctata 33532473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 2457203 - 2457273
Alignment:
Q  20 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||| |||||| |||||||| |||   ||||||||||| |||||||||||||||||||||||||||||||    
T  2457203 tatagtgtagtggaatttgaaaaaacgactattgttttgtgatatgctatttagtacaaaatgttgtcaaa 2457273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 11602611 - 11602521
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||||||||||||||||||||||||||||||  | |  | |||||||| ||| ||||||||||||| |||| |||  ||||||||    
T  11602611 tagcgtagtgaaatttgaacaaatcgctattgttttgtaacaaacaatttagtataaagtgttgtcaaatagaagctttagctgcgctata 11602521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 7939859 - 7939975
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatac 116  Q
    |||||||||||| ||||||||||  ||||| |||||||| || ||||  ||||| |||||||| || ||||||||||| ||||||| ||| |||||  ||    
T  7939859 cactatagcgtaatgaaatttgattaaatcactattgttctgagatactctattcagtacaaagtgatgtcaaatagcggctatagtggctctatagcac 7939958  T
Q  117 tattgtatagcggaatt 133  Q
    | | | |||||||||||    
T  7939959 tgtagcatagcggaatt 7939975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 9163745 - 9163816
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||  ||||||||||||||| ||||||||  |  ||| |||||||||||||||||||||||||||||    
T  9163745 tagcgtagaaaaatttgaacaaatccctattgttccgttatacgctatttagtacaaaatgttgtcaaatag 9163816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 26373077 - 26373143
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||| |||||||| || |||||||| || |||| ||||||||||||||| |||||||||||||    
T  26373077 tagtgaaaattgaacaactcactattgttctgtgatacgctatttagtacaaagtgttgtcaaatag 26373143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 9074182 - 9074105
Alignment:
Q  48 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtata 125  Q
    ||||||||||||||||  ||||||| ||||||||||| ||||||||  ||||||| |||||||||  ||| |||||||    
T  9074182 ctattgttttgcgatacactatttactacaaaatgttatcaaatagaggctatagcggcgctatagcactgttgtata 9074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 9194493 - 9194433
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||| |||||||| ||||||||| ||| ||| | |||||||||||||||||||||||||||    
T  9194493 aattggaacaaattgctattgttctgctatacggtatttagtacaaaatgttgtcaaatag 9194433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 33282734 - 33282793
Alignment:
Q  70 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 129  Q
    ||||| ||||||||||| |||||||| |||||| |||||||||| |||||||| ||||||    
T  33282734 ttagtgcaaaatgttgtgaaatagcatctatagtggcgctataaaactattgtgtagcgg 33282793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 653351 - 653409
Alignment:
Q  37 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagca 95  Q
    ||||||||||| ||||| | || |||||||||||||| ||||| |||||||||||||||    
T  653351 tgaacaaatcggtattgatatgtgatatgctatttagcacaaactgttgtcaaatagca 653409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 112
Target Start/End: Original strand, 770343 - 770421
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||||||| |||||||  | |||| |||||||||||||||  ||||||||||||| |||  || |||||||||    
T  770343 atttgaacaaatcggtattgttccgtgatacgctatttagtacaaagggttgtcaaatagcggctgcagtggcgctata 770421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 95
Target Start/End: Complemental strand, 2231128 - 2231090
Alignment:
Q  57 tgcgatatgctatttagtacaaaatgttgtcaaatagca 95  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  2231128 tgcgatatgctatttagtacaaaatgttgtccaatagca 2231090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 14933137 - 14933211
Alignment:
Q  47 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattg 121  Q
    ||||||||| |||||||  || ||||||||||| |||||||| ||||| | ||||| |||||||||| |||||||    
T  14933137 gctattgttctgcgatacactctttagtacaaattgttgtcagatagcggatatagtggcgctataacactattg 14933211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 21869848 - 21869926
Alignment:
Q  18 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 96  Q
    ||||||||||||   |||| |||||||||  |||||||  | ||||  |||||||||||||||||||||||||||||||    
T  21869848 actatagcgtagcagaattcgaacaaatcattattgttccgtgatacactatttagtacaaaatgttgtcaaatagcag 21869926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 29243164 - 29243074
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||| ||||||||||| || |||||||| || ||||  ||||||| || ||||| | ||||||| || ||||||| |||||||||    
T  29243164 tagcgtagtggaatttgaacaattctctattgttctgggatacactatttaatataaaatctagtcaaattgcggctatagtggcgctata 29243074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 33735469 - 33735435
Alignment:
Q  60 gatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||||||||||||||||||||||||    
T  33735469 gatatgctatttagtacaaaatgttgtcaaatagc 33735435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 1906930 - 1906845
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||| | |||| |||||||||||||| |||||||| ||| | |   ||||||||||||| |||| |||||||||||| ||||    
T  1906930 cactatagtgcagtggaatttgaacaaatcactattgttctgcaacaaaatatttagtacaaattgttatcaaatagcagcgatag 1906845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 2766868 - 2766945
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||||| |||||||| || |||| | ||||||||| ||||| ||||||||||| ||| ||||| || |||||    
T  2766868 tttgaacaaatctctattgttatgtgatacgttatttagtataaaatattgtcaaatagtagccatagaagcactata 2766945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 4886204 - 4886257
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaa 80  Q
    ||||| |||||||||||||| ||||||||  ||||||||||||||||| |||||    
T  4886204 tagtggaatttgaacaaatctctattgttccgcgatatgctatttagtgcaaaa 4886257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 8432017 - 8432090
Alignment:
Q  21 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||  ||||||||||||||||||||| ||  || | |||||| |||||||||| || |||||||||||    
T  8432017 atagcgtagcaaaatttgaacaaatcgctattattcagcaagatgctaattagtacaaagtgctgtcaaatagc 8432090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 264555 - 264615
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||| | ||||||| || | || ||||||||||||||| |||||||||||||    
T  264555 aatttgaacaaattgttattgttctgtggtaggctatttagtacaaagtgttgtcaaatag 264615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Original strand, 6012248 - 6012320
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcg 107  Q
    |||||||| |||||||||| | || ||||  ||||||||| |||| |||||||||||||||||| ||| ||||    
T  6012248 tttgaacacatcgctattgctctgtgatactctatttagttcaaactgttgtcaaatagcagctttagcggcg 6012320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 14933079 - 14933023
Alignment:
Q  40 acaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 96  Q
    ||||| |||||||||| ||| |||  ||||||||||||||||||||||| |||||||    
T  14933079 acaaaccgctattgttctgcaatacactatttagtacaaaatgttgtcagatagcag 14933023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33996416 - 33996332
Alignment:
Q  16 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||||| ||||||| | |||||||||||| ||||||||||  || ||  ||| |||| |||||||||||||| |||||| |||||    
T  33996416 ccactaaagcgtagcggaatttgaacaaaccgctattgttccgcaatccgctttttactacaaaatgttgtctaatagctgctat 33996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 739704 - 739751
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||| ||||||||||| |||||||||||||||||||| ||| |||||    
T  739704 gctatatagtacaaaatattgtcaaatagcagctatagtggcactata 739751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 5730252 - 5730189
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagct 98  Q
    |||||| |||||||| |||||    |||||||||||||||||||||| ||||||||||| ||||    
T  5730252 tttgaataaatcgctcttgttccatgatatgctatttagtacaaaatcttgtcaaatagtagct 5730189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 19390976 - 19391023
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||||||    
T  19390976 gctatttagtacaaagtattgtcaaatagcagttatagtggcgctata 19391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 30532188 - 30532117
Alignment:
Q  83 ttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctg 154  Q
    |||||||||||| | ||||||||||||||| |||| | || ||| ||||||| ||||||| ||||| |||||    
T  30532188 ttgtcaaatagcggttatagaggcgctatagtactgtagtgtagaggaattcgaacaaaccactattttctg 30532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 33260438 - 33260497
Alignment:
Q  70 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 129  Q
    ||||| ||||||||||| |||||||| |||||| || ||||||| |||||||| ||||||    
T  33260438 ttagtgcaaaatgttgtgaaatagcatctatagtggtgctataaaactattgtgtagcgg 33260497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 33851330 - 33851279
Alignment:
Q  49 tattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||||||  ||||||||||||||| ||||||||| |||||||| |||||    
T  33851330 tattgttttgtcatatgctatttagtataaaatgttgccaaatagctgctat 33851279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 3736992 - 3737038
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 79  Q
    ||||||||||||| | ||||||| |||||||||||||| ||||||||    
T  3736992 aatttgaacaaattgttattgttctgcgatatgctattcagtacaaa 3737038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 26494408 - 26494466
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    ||||||||| ||| ||||||||| ||| ||  ||||||||||||||| |||||||||||    
T  26494408 aatttgaactaattgctattgttctgcaattcgctatttagtacaaactgttgtcaaat 26494466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 31322632 - 31322702
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 89  Q
    ||||||||||||| ||||||||||||| | |||| || || ||||  ||||||  ||||||||||||||||    
T  31322632 ctatagcgtagtggaatttgaacaaattgttattattctgtgatacactatttcttacaaaatgttgtcaa 31322702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 31694797 - 31694723
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||| |||||||| |||||  |||||  ||||||||| || ||||  ||||||||||||||||||| ||||||||    
T  31694797 ctatggcgtagtggaatttagacaaactgctattgttctgtgatacactatttagtacaaaatgttttcaaatag 31694723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 33386192 - 33386254
Alignment:
Q  67 tatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 129  Q
    ||||| || ||||||||||| |||||||  |||||| |||||||||| |||||||| ||||||    
T  33386192 tatttggttcaaaatgttgtgaaatagcctctatagtggcgctataaaactattgtgtagcgg 33386254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Complemental strand, 4354371 - 4354338
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagcta 99  Q
    ||||||||||||||||||||| ||||||||||||    
T  4354371 ctatttagtacaaaatgttgtaaaatagcagcta 4354338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 9075206 - 9075271
Alignment:
Q  67 tatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    |||| ||||||||||||||||||||||  | ||||| |||||||||  ||| ||||||| ||||||    
T  9075206 tattaagtacaaaatgttgtcaaatagaggttatagcggcgctatagcactgttgtataacggaat 9075271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 29405008 - 29404955
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgtt 84  Q
    |||||||||| |||| ||||||||||  ||||||| ||||||||||||| ||||    
T  29405008 gaaatttgaaaaaattgctattgtttcacgatatgttatttagtacaaagtgtt 29404955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 32392406 - 32392369
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  32392406 gctatttagtacaaagtattgtcaaatagcagctatag 32392369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 24769309 - 24769369
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||||  ||||||| ||| |||  |||||||||||||| | |||||||||||    
T  24769309 aatttgaacaaatcattattgttctgcaatacactatttagtacaaagtattgtcaaatag 24769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 15606404 - 15606321
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||| | ||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||    
T  15606404 ctatagcattgtgaaatttaaacaaatcactattgttctgctatatgctatttagtacaaaatgttgtcaaataacagctatag 15606321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 7347693 - 7347777
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatact 117  Q
    ||||||||||||| ||||||||||||| |||  |||||||||||||||| |||| ||||||| ||||||||||||||||| ||||    
T  7347693 aatttgaacaaattgctattgttttgcaatacactatttagtacaaaatattgtgaaatagcggctatagaggcgctatagtact 7347777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 6026031 - 6025952
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||  |||||||  ||||||||    
T  6026031 aatttgaacaaatagttattgttccgcgatatgctatttagtacaaaatgttgtcaaatagtggctatagcagcgctata 6025952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 17473136 - 17473206
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||| ||||||  ||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  17473136 gaaatttaaacaaaatgctattgttttgcaatatgctatttagtacaaaatattgtcaaatagccgctata 17473206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 52517141 - 52517064
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||| |||||| ||||||||| ||| |||||| ||||| |||||| ||||||||||||||| ||||||||||||    
T  52517141 cactatagagtagtggaatttgaactaattgctattattttgtgatatgttatttagtacaaaatattgtcaaatagc 52517064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 30882449 - 30882515
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||  ||||||||||    
T  30882449 tagtggaatttgaacaaatcactattgttttgcgatatgcta-ttagtacaaaatgacgtcaaatagc 30882515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 44417783 - 44417857
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||  |||||||||||| || |||||||||| |||||| |||||||| |||| |||||||||||||    
T  44417783 ctatagcgtagtagaatttgaacaaaccgttattgttttgggatatgttatttagtgcaaagtgttgtcaaatag 44417857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 43391595 - 43391470
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    |||||||||||||||||||||||   ||||   |||||||||||||||||||||||||| || |||||||    ||||||  ||| ||| ||||| |||     
T  43391595 aatttgaacaaatcgctattgttccccgatgcactatttagtacaaaatgttgtcaaatggcggctatagcattgctatagcactgttgcatagcagaac 43391496  T
Q  133 tcaaacaaactactatcttctgcgat 158  Q
    ||||||||||| |||| || ||||||    
T  43391495 tcaaacaaactgctattttttgcgat 43391470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 47848050 - 47847982
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||||||||||   |||||||| |||| |||||||||||||||||||||| |||||||    
T  47848050 aatttgaacaaatcgctattgttccacgatatgccattt-gtacaaaatgttgtcaaatagcggctatag 47847982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 102
Target Start/End: Original strand, 3240482 - 3240548
Alignment:
Q  36 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||| |||||||||||||||| |||||||| || | |||||||||||||||  |||||||    
T  3240482 ttgaacaaatcactattgttttgcgatacgctatttattaaacaatgttgtcaaatagaggctatag 3240548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 156
Target Start/End: Original strand, 15794029 - 15794165
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 118  Q
    |||||||| |||| |||||||||| |||  | ||||| || |||| |||||||||||||||||| |||| | | |  ||||||  |||||||||  ||||    
T  15794029 ctatagcgcagtggaatttgaacagatcatttttgttctgagatacgctatttagtacaaaatgctgtc-agtcggtgctataacggcgctatagcacta 15794127  T
Q  119 ttgtatagcggaattcaaacaaactactatcttctgcg 156  Q
    |||| ||| ||||||||||||||  ||||| |||||||    
T  15794128 ttgtgtagtggaattcaaacaaatcactattttctgcg 15794165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 15955893 - 15955961
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||||||||| | ||||| || ||||  |||||||| ||||||||||||||||||||| |||||    
T  15955893 aatttgaacaaatcgttcttgttatgtgatacactatttaggacaaaatgttgtcaaatagcatctata 15955961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 32868272 - 32868328
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    ||||||||||||||||||||| ||| |||| ||||||||| |||| |||||||||||    
T  32868272 tttgaacaaatcgctattgttctgcaatatactatttagtgcaaattgttgtcaaat 32868328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 33651660 - 33651715
Alignment:
Q  38 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||| ||||||| | | ||||||||||||||| |||||||||||||||||    
T  33651660 gaacaaatcgttattgttctacaatatgctatttagtataaaatgttgtcaaatag 33651715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 15592737 - 15592675
Alignment:
Q  40 acaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||| || ||||||||| ||||||||||| ||  |||||||||||||||||| |||||||    
T  15592737 acaaatcactcttgttttgcaatatgctatttggtgtaaaatgttgtcaaatagcggctatag 15592675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 26161637 - 26161587
Alignment:
Q  62 tatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||||||||||| | ||||||||||||||||||||  ||||||||    
T  26161637 tatgctatttagtacaaagtattgtcaaatagcagctatagccgcgctata 26161587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 3950673 - 3950742
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||| ||||||||  |||||| |||||||||||| ||||  ||| ||||||| |||||||    
T  3950673 aatttgaacaaatcactattgttccgcgatacgctatttagtaccaaataatgtgaaatagctgctatag 3950742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 7991516 - 7991597
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||||||| | ||||||||  | |||| || |||||||||| ||| |||| |||||||||||| || |||||||||    
T  7991516 gaaatttgaacaaaccactattgttccgtgatacgccatttagtacataatattgtgaaatagcagctagagtggcgctata 7991597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 15923827 - 15923758
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||| |||||||||||||||| ||||  |||||| |||| || |||||| | |||||||||||||    
T  15923827 aatttgaactaatcgctattgttttgtgatacactattttgtacgaagtgttgttagatagcagctatag 15923758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26360401 - 26360296
Alignment:
Q  16 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataata 115  Q
    |||||||| ||| ||| |||||| ||||| ||| ||||||   || ||| ||||||||||||||||| | |||||||||  |||||| |||| |||| ||    
T  26360401 ccactataacgtggtggaatttggacaaaccgcaattgttccccggtatactatttagtacaaaatgctatcaaatagcgactatagtggcgatatagta 26360302  T
Q  116 ctattg 121  Q
    ||||||    
T  26360301 ctattg 26360296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 32721421 - 32721482
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||| |||||||| | |||||||||||||    |||||||||||||||||||||||||||||    
T  32721421 aattcgaacaaattgttattgttttgcgaagcactatttagtacaaaatgttgtcaaatagc 32721482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 11766237 - 11766188
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgtt 84  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||| ||||    
T  11766237 aatttgaacaaatagctattgtttt--gatatgctatttagtacaaagtgtt 11766188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 12764017 - 12764101
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatact 117  Q
    ||||| |||||||  |||||||| ||| |||||||||||| ||| || ||||  |||||||| ||||||| ||||||||| ||||    
T  12764017 aattttaacaaattactattgttctgcaatatgctatttaatacgaagtgtttccaaatagcggctatagtggcgctatagtact 12764101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 28067473 - 28067557
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||| ||| | |||||||  ||||| || ||||||||||||||| ||||| ||| ||||| ||||| ||| |||||||||    
T  28067473 cactatagcataggggaatttgatgaaatcactgttgttttgcgatatgttatttggtataaaatattgtcgaattgcagctata 28067557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 110
Target Start/End: Original strand, 400901 - 400972
Alignment:
Q  39 aacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgcta 110  Q
    |||||||| | |||||| |||||||| | |||||||||||| | ||||||||||| || ||||| |||||||    
T  400901 aacaaatcaccattgttctgcgatatacaatttagtacaaagtattgtcaaatagaagttatagtggcgcta 400972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 11049047 - 11049122
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||| |||||||||||||||||| || |   |||||  |||| ||||||||||| || |||||||||||||||||    
T  11049047 tagtggaatttgaacaaatcgctactgctccacgatacactatctagtacaaaatcttatcaaatagcagctatag 11049122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 46331156 - 46331109
Alignment:
Q  47 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||||||    
T  46331156 gctattgttttatgatatgctattaagtacaaaatggtgtcaaatagc 46331109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Original strand, 3335145 - 3335211
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagcta 99  Q
    |||||||||||||| ||||||||  |||| |  || ||||||| ||| |||||||||||||||||||    
T  3335145 aatttgaacaaatcactattgttccgcgacaccctgtttagtataaagtgttgtcaaatagcagcta 3335211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 4541583 - 4541638
Alignment:
Q  36 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||| ||||||||||| ||||||||||| ||||  | |||||||||||||    
T  4541583 ttgaacaaatcgttattgttttgcaatatgctatttggtac--agtgttgtcaaatag 4541638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 15190855 - 15190929
Alignment:
Q  20 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||| ||| | ||||| || |||| ||||||||| | |||||  ||||| |||||||||||||||||||||||    
T  15190855 tatagcctagcggaatttaaagaaattgctattgttctacgatacactattcagtacaaaatgttgtcaaatagc 15190929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 15365009 - 15364936
Alignment:
Q  36 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||| |||||||||||| ||||   || |||||||||| |||||| ||||||| |||||| |||| |||||    
T  15365009 ttgaacaaattgctattgttttgtgata---tacttagtacaaagtgttgttaaatagcggctatacaggcactata 15364936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 19392212 - 19392262
Alignment:
Q  46 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 96  Q
    |||||||||||  |||||| ||||| |||||||||| ||||||||||||||    
T  19392212 cgctattgtttcacgatatactattaagtacaaaatattgtcaaatagcag 19392262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 50322030 - 50322108
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||| ||||| |||||||||||| | |||||||| | |||||  | |||||||| ||||| ||||||||| ||||||||    
T  50322030 tagcatagtggaatttgaacaaaccactattgttctacgatacacaatttagtataaaatattgtcaaattgcagctat 50322108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 14643262 - 14643201
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||||||| || ||||||  |||||| ||||||||||| || ||||| |||||||||    
T  14643262 aatttgaacaaattgccattgttcagcgatacgctatttagtagaagatgttttcaaatagc 14643201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 15956878 - 15956935
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||||||||||| | |||||||  || ||| ||||||||||||||| ||||||||||    
T  15956878 aatttgaacaaattgttattgttccgccatacgctatttagtacaaagtgttgtcaaa 15956935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 1880137 - 1880082
Alignment:
Q  38 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||| ||||||||| || ||||  ||||| |||||||||||||||||||||||    
T  1880137 gaacaaattgctattgttatgtgatactctatt-agtacaaaatgttgtcaaatagc 1880082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 46937570 - 46937630
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||  |||||||||  |||||  ||||||||||||||||| |||| ||||||    
T  46937570 aatttgaacaaagtgctattgttccgcgatgcgctatttagtacaaaatattgtgaaatag 46937630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 48432703 - 48432631
Alignment:
Q  18 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||||||||||   |||||| ||| | | |||||||||||  ||| ||||||||||||| ||||||||||||    
T  48432703 actatagcgtagcagaatttggacacaccactattgttttgtaatacgctatttagtacacaatgttgtcaaa 48432631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 7246026 - 7245942
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||| ||| ||| ||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| ||||||    
T  7246026 cactataccgtggtggaatttaaacaaatcgctattcttttgcgatacgctatttagtacaaagtgttgtcaaatagcggctata 7245942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 6894386 - 6894305
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||||||||| ||||||||||||| ||||||||||  | |||  ||||| ||||||||||||||||||||| |||||||    
T  6894386 ctatagcgtagtggaatttgaacaaattgctattgtttaacaatacactattaagtacaaaatgttgtcaaataacagctat 6894305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 1110471 - 1110401
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||||||||| |||||||||| | ||||||||||||||| | || ||||||||||||||| |||||    
T  1110471 gaaatttgaacaaattgctattgtttcgggatatgctatttagttctaagtgttgtcaaatagcaactata 1110401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 38774381 - 38774312
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||  ||||||||||||||| |||||||    
T  38774381 aatttgaacaaatcactattgttcagcgttatgctatttagtacatcatgttgtcaaatagcggctatag 38774312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 24942499 - 24942574
Alignment:
Q  37 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||| ||||||||||||    |||| |||| ||||||||||||||||||||||||||||| ||| |||||||||    
T  24942499 tgaacagatcgctattgttccatgatacgctaattagtacaaaatgttgtcaaatagcagctgtagcggcgctata 24942574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 2219599 - 2219525
Alignment:
Q  20 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||| |||||  |||||||||| |||| ||||||| |  |||||||||||||||||||||| ||||||||||||    
T  2219599 tatagtgtagtagaatttgaacatatcgttattgttctctgatatgctatttagtacaaaatattgtcaaatagc 2219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 155
Target Start/End: Complemental strand, 30900173 - 30900051
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    ||||||||| |||||||||||||  ||||||  |||||||||||||||| |||| ||||||  ||||| | || |||||| |||| ||  ||||||||||    
T  30900173 aatttgaacgaatcgctattgttcagcgatacactatttagtacaaaatattgtgaaatagtggctatcgcggtgctatagtactgttacatagcggaat 30900074  T
Q  133 tcaaacaaactactatcttctgc 155  Q
    |  | ||||| ||||| ||||||    
T  30900073 ttgagcaaaccactattttctgc 30900051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 39417762 - 39417816
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtc 87  Q
    |||||||||||||| ||||||||  |||||||||||| |||||||||||||||||    
T  39417762 aatttgaacaaatcactattgttccgcgatatgctatatagtacaaaatgttgtc 39417816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 23747323 - 23747392
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||| ||||  ||||||||    
T  23747323 aatttgaacaaatagctattgttctgtgatatgctagttagtacaaactgttgtcgaataatagctatag 23747392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 38921262 - 38921362
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    |||||||||||||| || ||||| |||||||| ||||||||| |||||| |||| || ||| ||||| || |||||||||  | | |||| |||||||||    
T  38921262 aatttgaacaaatcactgttgttctgcgatatactatttagtgcaaaatattgtgaagtagtagctacagtggcgctatagcattgttgtgtagcggaat 38921361  T
Q  133 t 133  Q
    |    
T  38921362 t 38921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 1109412 - 1109354
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 89  Q
    |||||||||||||||| | ||||||  ||||||  ||||||||||||||||||||||||    
T  1109412 gaaatttgaacaaatccccattgttccgcgatacactatttagtacaaaatgttgtcaa 1109354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 13380906 - 13380968
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagca 95  Q
    ||||||||||||| |||| |||| ||| ||  |||||||||||||||||||||||||| ||||    
T  13380906 aatttgaacaaattgctactgttctgctatccgctatttagtacaaaatgttgtcaaacagca 13380968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 21451571 - 21451517
Alignment:
Q  47 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||| ||||||| || |||||||||||||| |||||||||||| ||||||    
T  21451571 gctattgttctgcgatacgcaatttagtacaaaatcttgtcaaatagcggctata 21451517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 143
Target Start/End: Complemental strand, 23218681 - 23218571
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    |||||| ||||||||  |||||| |  |||| |||||||| ||||||||||||||||||||||  ||||  |||||||||  |||  || ||| ||||||    
T  23218681 aatttggacaaatcgtcattgttctatgatacgctatttaatacaaaatgttgtcaaatagcaaatataatggcgctatagcactgctgcataacggaat 23218582  T
Q  133 tcaaacaaact 143  Q
    | |||||||||    
T  23218581 ttaaacaaact 23218571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 400676 - 400623
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctattta 72  Q
    ||||| ||||||| ||||||||||||||||||||| | ||| ||||||||||||    
T  400676 ctatatcgtagtggaatttgaacaaatcgctattgctatgcaatatgctattta 400623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 102
Target Start/End: Original strand, 5260422 - 5260459
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  5260422 gctatttagtacaaaatattgtcaaatagcagctatag 5260459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 21451016 - 21450959
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    |||||||||||||| |||||||| ||  ||||||||||||||||||| | ||||||||    
T  21451016 aatttgaacaaatcactattgttctggaatatgctatttagtacaaactattgtcaaa 21450959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 8095907 - 8095955
Alignment:
Q  48 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 96  Q
    ||||||| ||||||||  |||||||||||||||||||||| ||||||||    
T  8095907 ctattgtgttgcgatacactatttagtacaaaatgttgtcgaatagcag 8095955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 23117420 - 23117360
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||||||||| ||    |||||||||||||| |||||||||||| ||||||    
T  23117420 aatttgaacaaatcgctatttttccatgatatgctatttagcacaaaatgttgtgaaatag 23117360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 112
Target Start/End: Original strand, 44124546 - 44124610
Alignment:
Q  48 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||| |||||||  |||||||||||| ||| |||||||||||| | ||||| |||||||||    
T  44124546 ctattgttctgcgatacactatttagtacagaatattgtcaaatagctgatatagcggcgctata 44124610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 1662703 - 1662624
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||||||  ||||||| ||||||  ||||||||||  ||||||||||||||| |   |||||||||| |||||    
T  1662703 aatttgaacaaatcattattgttctgcgatgcgctatttagtgaaaaatgttgtcaaatggtgactatagaggcactata 1662624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Original strand, 10455094 - 10455141
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||||||||| ||||||||| || ||||||| |||||||||    
T  10455094 gctatttagtacaaaattttgtcaaattgcggctatagtggcgctata 10455141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 154
Target Start/End: Complemental strand, 24673451 - 24673364
Alignment:
Q  67 tatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaaactactatcttctg 154  Q
    |||| ||||||||||||||||||||||| ||||||| ||| | |||  ||| ||| ||||| |||||  ||||||| ||||| |||||    
T  24673451 tattcagtacaaaatgttgtcaaatagccgctatagcggcaccatatcactgttgcatagctgaatttgaacaaaccactattttctg 24673364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 33007955 - 33007893
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||||||||| ||||||| ||  |||||| |||||| || |||||||||||||||||||||||    
T  33007955 atttgaacaaaccgctattattccgcgataagctatt-agcacaaaatgttgtcaaatagcagc 33007893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 37233722 - 37233781
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||| || | |||||||   ||||| |||||||||||||||||||||||||||||    
T  37233722 tttgaacaattcacaattgtttcaggatatcctatttagtacaaaatgttgtcaaatagc 37233781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 38622954 - 38622871
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||   |||||||| |||||| |||||||    ||||  |||||||| |||||||||||||||||||| |||||||    
T  38622954 ctatagcgtagcagaatttgaataaatcgatattgttccatgatacactatttagcacaaaatgttgtcaaatagcggctatag 38622871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 7982415 - 7982345
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 89  Q
    ||||||| ||||| ||||||||||||| |||||||||||| ||||  ||||| | | |||| |||||||||    
T  7982415 ctatagcatagtggaatttgaacaaattgctattgttttgtgatacactattcactgcaaattgttgtcaa 7982345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 21343752 - 21343694
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtaca 77  Q
    ||||||||||| | ||| |||||||||| || |||||||||||||  ||||||||||||    
T  21343752 ctatagcgtagaggaatatgaacaaatcactgttgttttgcgatacactatttagtaca 21343694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 90
Target Start/End: Original strand, 25268805 - 25268875
Alignment:
Q  20 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||||||||   ||||||||||||||| ||||||| ||| |||  |||||||||| ||||| ||||||||    
T  25268805 tatagcgtagcagaatttgaacaaatcgttattgttctgctatacactatttagtataaaatattgtcaaa 25268875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 30885363 - 30885321
Alignment:
Q  51 ttgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||| ||||||||||||||||||||||||  |||||||||||    
T  30885363 ttgttctgcgatatgctatttagtacaaaacattgtcaaatag 30885321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 33581726 - 33581808
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 113  Q
    |||||||||||||||| | ||||||  | |||| |||||||  ||||| ||||||||||||||| || |||| || |||||||    
T  33581726 gaaatttgaacaaatcaccattgttacgggatacgctatttgatacaatatgttgtcaaatagcggccatagtggtgctataa 33581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Complemental strand, 40869581 - 40869547
Alignment:
Q  67 tatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||||||||||||||||||||| ||||||    
T  40869581 tatttagtacaaaatgttgtcaaatagcggctata 40869547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 30408321 - 30408257
Alignment:
Q  26 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    |||| ||||||||||||| | |||||||||| | ||||| ||| ||||||||||||||| ||||||    
T  30408321 gtagcgaaatttgaacaagtggctattgttt-gtgatattctaattagtacaaaatgttttcaaat 30408257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 31838837 - 31838929
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||| ||||| | ||| |||||||  |||||||| ||| ||||| ||||||||||||| ||||||  |||||||||| ||| || ||||||    
T  31838837 ctatagcatagtggagttttaacaaatttctattgttctgcaatatg-tatttagtacaaattgttgttcaatagcagctctagtggtgctata 31838929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 32231762 - 32231823
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||| ||| |||| || |||||| ||||||| ||||||| |||| |||||||    
T  32231762 aatttgaacaaatctctagtgttctgtgatatgttatttagcacaaaatattgtgaaatagc 32231823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 32888963 - 32889016
Alignment:
Q  60 gatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 113  Q
    |||||||||||||||||||| | |||||||||||  ||||| | ||||||||||    
T  32888963 gatatgctatttagtacaaagtattgtcaaatagtggctattgcggcgctataa 32889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 34925345 - 34925312
Alignment:
Q  69 tttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||||||||||||| |||||||    
T  34925345 tttagtacaaaatgttgtcaaatagcggctatag 34925312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 25314104 - 25314032
Alignment:
Q  20 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    |||||| ||| | ||||||||||||||| ||||||| || ||||  |||||| ||||||| |||||| |||||    
T  25314104 tatagcatagaggaatttgaacaaatcgttattgttctgtgatacactatttggtacaaagtgttgttaaata 25314032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 11257714 - 11257789
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||| |||| | ||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  11257714 ctatagtgtagcggaatatgaacaaatcgctattgttatacgatatgctatttagtacaaaatgttgtcaaatagc 11257789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 21047136 - 21047059
Alignment:
Q  25 cgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||  ||||| ||||||||  | |||||||||||||||| |||||||||||||||| | |||||||    
T  21047136 cgtagtgaaatttgataaaatcactattgttccgtgatatgctatttagtaaaaaatgttgtcaaataacggctatag 21047059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 39647188 - 39647139
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatg 82  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  39647188 aatttgaacaaatcgttattgttctgcgatatgctatttagtacaaaatg 39647139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 7430118 - 7430218
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    |||||| ||||| ||||||||||   | ||| |||||||||||||| ||||||||||||||| ||||| |  ||||||||| |||| ||| |||||||||    
T  7430118 aatttggacaaaccgctattgttccacaatacgctatttagtacaagatgttgtcaaatagcggctattgtagcgctataacactactgtgtagcggaat 7430217  T
Q  133 t 133  Q
    |    
T  7430218 t 7430218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 27731654 - 27731590
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||| |||||| |||||||||||  ||||||||||||||||||||| | |||||||||||||||    
T  27731654 aatttaaacaaaccgctattgtttaccgatatgctatttagtacaaagttttgtcaaatagcagc 27731590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 39159810 - 39159727
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||| | ||||| |||||| | |||||||| || ||||||| ||||||||||||  |||| ||||||||||||||||    
T  39159810 ctatagcgtagcggaattttaacaaaccactattgttctgtgatatgcaatttagtacaaagcgttgacaaatagcagctatag 39159727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Complemental strand, 16973905 - 16973824
Alignment:
Q  21 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||| | ||||  |||||||| ||||||||  |||||| | | ||||||||||||| ||||||||||||||||||||    
T  16973905 atagcgtagaggaattcaaacaaatcactattgttccgcgatacgttgtttagtacaaaattttgtcaaatagcagctatag 16973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 160
Target Start/End: Original strand, 34156643 - 34156783
Alignment:
Q  20 tatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactat 119  Q
    ||||||||||   ||||||||| ||||||| ||| |  | |||| |||||||||| ||||||||||| |||||||| |||||   | ||||||  ||| |    
T  34156643 tatagcgtagcagaatttgaactaatcgcttttgctccgtgatacgctatttagtgcaaaatgttgttaaatagcaactatatttgtgctatagcactgt 34156742  T
Q  120 tgtatagcggaattcaaacaaactactatcttctgcgattg 160  Q
    || ||||| |||||  |||||||  ||||||||||||||||    
T  34156743 tgcatagcagaatttgaacaaacagctatcttctgcgattg 34156783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 41894417 - 41894481
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||||||||||| | ||||||| ||| ||| |||||||| |||||| |||||||||||||||||    
T  41894417 aatttgaacaaattgttattgttctgcaatacgctatttactacaaagtgttgtcaaatagcagc 41894481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 41015065 - 41015003
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||  |||||||||  | |||||||||||||||||||| |||||||| |||||    
T  41015065 aaatttgaacaaactgctattgttccgtgatatgctatttagtacaaagtgttgtcatatagc 41015003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 6202589 - 6202658
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||| ||||||||||||||| | || |||||||||||||||||||||   ||| |||||||||| ||||    
T  6202589 aattttaacaaatcgctattgctatgtgatatgctatttagtacaaaacaatgtgaaatagcagccatag 6202658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 33342728 - 33342789
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||| |||||||||||||| |||||||  ||||| |||||||| | ||||||||||||    
T  33342728 aatttgaataaatcgctattgttatgcgatacactattaagtacaaagtattgtcaaatagc 33342789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 41991173 - 41991254
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||| ||||| ||||| ||||||||| |||| || ||| ||| || |||||||||||| ||||||  ||||||||||||    
T  41991173 ctatagcatagtggaatttaaacaaatcgatattattctgctatacgcaatttagtacaaagtgttgtttaatagcagctat 41991254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 43283491 - 43283418
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||||||| ||| | ||||||||||||||||| |||||  || ||| ||||||| | ||||||||||||||||    
T  43283491 cactatagcatagcgtaatttgaacaaatcgctgttgttccgcaatacgctatttgggacaaaatgttgtcaaa 43283418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 9446286 - 9446400
Alignment:
Q  47 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata---gaggcgctataatactattgtatagcggaattcaaacaaact 143  Q
    ||||||||| ||| ||||||||||||||||||||| || | ||||||| ||||||   | || ||||||  ||| |||| ||||||||||  | ||||||    
T  9446286 gctattgttatgcaatatgctatttagtacaaaatattatgaaatagcggctatagtggtggtgctatagcactgttgtgtagcggaatttgagcaaact 9446385  T
Q  144 actatcttctgcgat 158  Q
     |||| |||||||||    
T  9446386 gctattttctgcgat 9446400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 31029562 - 31029638
Alignment:
Q  18 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||| ||| ||||||||| |||||| || ||||| ||||||||  || || ||||||| ||||||||||||||    
T  31029562 actatagcttagagaaatttgatcaaatcactgttgttctgcgatatattactttgtacaaagtgttgtcaaatagc 31029638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Complemental strand, 40678028 - 40677960
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||||||  |  |||||| |||||| |||| |||||||||||| ||||||||||||| ||||||    
T  40678028 aatttgaacaaactggaattgttctgcgatgtgctgtttagtacaaaaagttgtcaaatagcggctata 40677960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 40990949 - 40991017
Alignment:
Q  25 cgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||| |||||  ||||| ||||||| || || || | |||||||||||||||||||||||||||||    
T  40990949 cgtagtggaatttagacaaaccgctattcttctgtgacacgctatttagtacaaaatgttgtcaaatag 40991017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 16033019 - 16033090
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||||||||  | |||||||||||||| || |||||  || ||| |||| |||||||||||||||||||||    
T  16033019 ctatagcgtatcggaatttgaacaaatctcttttgttacgcaatacgctacttagtacaaaatgttgtcaaa 16033090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 29466168 - 29466250
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||| | |||| |||||||||| ||| | || |||||| ||||||||||||||||||||||  ||||||||| ||| |||||    
T  29466168 ctatagtggagtggaatttgaacatatcaccatcgttttgtgatatgctatttagtacaaaat-atgtcaaataacagttatag 29466250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 17855226 - 17855260
Alignment:
Q  58 gcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    |||||||||| ||||||||||||||||||||||||    
T  17855226 gcgatatgctttttagtacaaaatgttgtcaaata 17855260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 18551549 - 18551479
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctataga 103  Q
    ||||| ||||||  |||||||||| | ||||||| |||||||||||| |||||||| |||||  |||||||    
T  18551549 aattttaacaaacagctattgtttcgagatatgcaatttagtacaaagtgttgtcatatagcgtctataga 18551479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 18839223 - 18839185
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgtt 55  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  18839223 cactatagcgtagtgatatttgaacaaatagctattgtt 18839185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 19115160 - 19115099
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||| || ||| |||||| || ||||| |||||||||||||| ||||||||||||    
T  19115160 gaaatttgaacagattgctgttgttt-gcaatatgatatttagtacaaaacgttgtcaaatag 19115099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 20981270 - 20981328
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    ||||||||| |||| |||||||| ||| ||| ||||||||||| ||||| |||||||||    
T  20981270 aatttgaactaatcactattgttctgcaatacgctatttagtataaaatattgtcaaat 20981328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 40213951 - 40213882
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||| ||||||||||| ||||||||  || ||| ||||| ||||||||||||||||||||| | |||||||    
T  40213951 gaaaattgaacaaatcactattgttc-gcaatacgctatgtagtacaaaatgttgtcaaatggtagctata 40213882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 41376402 - 41376333
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||| ||  | ||||||||||||||||||| ||||||||| |  |||| |||||||||||||||    
T  41376402 aaatttgaacatatgtccattgttttgcgatatgcta-ttagtacaacacattgtgaaatagcagctatag 41376333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 1792139 - 1792110
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgat 62  Q
    ||||||||||||||||||||||||||||||    
T  1792139 aatttgaacaaatcgctattgttttgcgat 1792110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 142
Target Start/End: Original strand, 6586502 - 6586627
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatac 116  Q
    ||||||||| ||||| |  || ||||||||||||||||    | ||||| |||||||| |||||| |||||||| ||| | ||||| | |||||||  ||    
T  6586502 cactatagcatagtggatattcaacaaatcgctattgtcccacaatatggtatttagtgcaaaatattgtcaaacagcggttatagtgccgctatagaac 6586601  T
Q  117 tattgtatagcggaattcaaacaaac 142  Q
    ||||| |||| ||||||  |||||||    
T  6586602 tattgcatagaggaatttgaacaaac 6586627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 7477621 - 7477556
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    ||||| ||||| || ||||| ||||||||  ||||| | |||||||||||||| ||||||||||||    
T  7477621 tagtggaattttaataaatcactattgttccgcgatttactatttagtacaaagtgttgtcaaata 7477556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 14956762 - 14956693
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||| ||||| || || ||||| |||||||| || |  ||||||||||||||| ||||||    
T  14956762 aatttgaacaaatcactattattctgtgatattctatttagcactatgtgttgtcaaatagcatctatag 14956693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 38346862 - 38346923
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||| || || |||||||| || ||||  ||||||| |||||||||||||||||||||    
T  38346862 aatttgaaaaagtcactattgttctgtgatacactatttactacaaaatgttgtcaaatagc 38346923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 39647296 - 39647243
Alignment:
Q  26 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 79  Q
    |||||| |||||||| |||||| ||||||| ||||||||||| ||||| |||||    
T  39647296 gtagtggaatttgaataaatcgttattgttctgcgatatgctgtttagcacaaa 39647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 631527 - 631483
Alignment:
Q  58 gcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||| ||||||||||||||||| |||||| ||||| |||||||    
T  631527 gcgatacgctatttagtacaaaatattgtcatatagcggctatag 631483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 4787945 - 4788021
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaaac 142  Q
    ||||||||||||||||||||||||||||  |||| | |||| |||||  ||| || |||| |||||||  |||||||    
T  4787945 ctatttagtacaaaatgttgtcaaatagtggctacacaggcactatagcactgttttatatcggaatttgaacaaac 4788021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 13996410 - 13996378
Alignment:
Q  58 gcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    |||||| ||||||||||||||||||||||||||    
T  13996410 gcgatacgctatttagtacaaaatgttgtcaaa 13996378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 34452045 - 34451993
Alignment:
Q  47 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagcta 99  Q
    |||||||||| ||||||||| |||||||||||| | |||| ||||| ||||||    
T  34452045 gctattgtttagcgatatgcaatttagtacaaagtattgtaaaatatcagcta 34451993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 37056370 - 37056430
Alignment:
Q  36 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 96  Q
    |||||||||| |||||||||  | | || ||| |||||||| |||||||||||||||||||    
T  37056370 ttgaacaaattgctattgttccgtggtacgctgtttagtacgaaatgttgtcaaatagcag 37056430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 94
Target Start/End: Complemental strand, 41399598 - 41399570
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||||||||||||||||||    
T  41399598 ctatttagtacaaaatgttgtcaaatagc 41399570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 5e-17; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 27317996 - 27318081
Alignment:
Q  55 tttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaattcaaacaa 140  Q
    ||||| ||||||||||||||| |||||| ||||||||||| ||||||| |||||||||  |||||||  |||||||||| ||||||    
T  27317996 tttgctatatgctatttagtaaaaaatgctgtcaaatagcggctatagtggcgctatataactattgcctagcggaatttaaacaa 27318081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 33958230 - 33958297
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 89  Q
    |||||||||| ||||||||||| ||||||||||| ||| |||||||||| | ||||||||||||||||    
T  33958230 tagcgtagtggaatttgaacaactcgctattgttctgcaatatgctattgaatacaaaatgttgtcaa 33958297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 26174925 - 26174994
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||| ||||||||| |||||||  |||||||||| || |||||||||||||||||||||||    
T  26174925 aaatttgaacaaat-gctattgttctgcgatacactatttagtataatatgttgtcaaatagcagctatag 26174994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 11530027 - 11530108
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||||||||| |||||||| |||||||  |||||||||||| ||| |||| ||||||| ||||||| ||| |||||    
T  11530027 gaaatttgaacaaatcactattgttctgcgatacactatttagtacataatattgtgaaatagcggctatagtggcactata 11530108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 41631944 - 41631885
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||| |||||||||||| ||||||||||||||||| || ||||||| |||||    
T  41631944 atttgaacaaattgctattgttttgtgatatgctatttagtacgaagtgttgtcgaatag 41631885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 42616798 - 42616723
Alignment:
Q  37 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||| | |||||||||||||||   |||||||||||||| |||||||||||||||| ||||| ||| |||||    
T  42616798 tgaacaaaccactattgttttgcgatccactatttagtacaaagtgttgtcaaatagcagttatagtggcactata 42616723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 17443035 - 17442941
Alignment:
Q  28 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgt 122  Q
    |||| ||||||||||||| |||||||||  |   || | |||||||| ||||||||||| |||||||| |||||| |||||||||| ||||||||    
T  17443035 agtggaatttgaacaaattgctattgttcagaattacgatatttagtgcaaaatgttgtgaaatagcatctatagtggcgctataaaactattgt 17442941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 44458305 - 44458225
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||||||| ||||| |||| ||||||| ||||||||||  ||||||   ||||||||||||| | |||||||||||||||    
T  44458305 cactatagcatagtggaattcgaacaaaccgctattgttccgcgatacaatatttagtacaaagtattgtcaaatagcagc 44458225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 4205011 - 4204949
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcag 96  Q
    |||||||| ||| ||||||||||  | |||||||||||||||| ||||||||||||||||||||    
T  4205011 aatttgaaaaaaccgctattgttccgtgatatgctatttagta-aaaatgttgtcaaatagcag 4204949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 18569435 - 18569490
Alignment:
Q  49 tattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagag 104  Q
    ||||||| || |||||||||||||||| ||| |||||||||||||| |||||||||    
T  18569435 tattgttctgtgatatgctatttagtataaagtgttgtcaaatagccgctatagag 18569490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 26 - 133
Target Start/End: Complemental strand, 31790554 - 31790447
Alignment:
Q  26 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtata 125  Q
    ||||||||||||| |||||  ||||||||| ||| |||  |||||||||| |||||||||||| ||||  | ||||| |||||||||  | ||||| |||    
T  31790554 gtagtgaaatttggacaaacagctattgttctgccatacactatttagtataaaatgttgtcatatagtggatatagtggcgctatatcagtattgcata 31790455  T
Q  126 gcggaatt 133  Q
    || |||||    
T  31790454 gcagaatt 31790447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 39597568 - 39597639
Alignment:
Q  24 gcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagca 95  Q
    |||||| | ||||| || ||||||||||||||  |||||| ||||||||||||||||| |||| ||||||||    
T  39597568 gcgtagcggaatttaaataaatcgctattgttccgcgatacgctatttagtacaaaatattgtgaaatagca 39597639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 20547165 - 20547095
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaa 89  Q
    |||||| || ||| |||||||| ||||||| |||||| ||| ||||||| ||||| |||||||||||||||    
T  20547165 ctatagggttgtggaatttgaagaaatcgccattgttctgcaatatgctctttagcacaaaatgttgtcaa 20547095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 2045133 - 2045047
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattg 121  Q
    |||||||||| |||| ||||||||||  |||  ||||||||||  |||| || ||||||||||||||||| ||| ||| ||||||||||    
T  2045133 aatttgaacacatcgttattgttttgttatacactatttagta--aaatattatcaaatagcagctatagtggctctaaaatactattg 2045047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 11328128 - 11328188
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctat--ttagtacaaaatgttgtcaaa 90  Q
    ||||||||||| ||||||||||| | || |||||||||  |||||||||||||||||||||    
T  11328128 aaatttgaacatatcgctattgtctcgcaatatgctattattagtacaaaatgttgtcaaa 11328188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 28044760 - 28044715
Alignment:
Q  48 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||    
T  28044760 ctattgttttgtgatatgcgatttagtacaaagtgttgtcaaatag 28044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 28804336 - 28804405
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||||||||||||||||    ||| ||||||||||||||| | |||||||||| | |||||||    
T  28804336 aatttgaacaaatcgctattgtttcagaataagctatttagtacaaagtattgtcaaataacggctatag 28804405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 32321501 - 32321542
Alignment:
Q  70 ttagtacaaaatgttgtcaaatagcagctatagaggcgctat 111  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  32321501 ttagtacaaaatgttgtcaaatagcagctatagcgccgctat 32321542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 94
Target Start/End: Original strand, 33971657 - 33971706
Alignment:
Q  45 tcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||||| ||| |||| |||||||||||||| ||||||||||||||    
T  33971657 tcgctattgttatgcaatatcctatttagtacaaattgttgtcaaatagc 33971706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 3110568 - 3110516
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 118  Q
    ||||||||||||||  ||||||||||||  ||||||| |||||||||||||||    
T  3110568 ctatttagtacaaagcgttgtcaaatagtggctatagcggcgctataatacta 3110516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 20265605 - 20265521
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctataga 103  Q
    ||||||||||| | |||||| ||| | ||||| |||||||||||| || |||||||| | |||||||||| || || ||||||||    
T  20265605 ctatagcgtagcggaatttggacacaccgctaatgttttgcgatacgcaatttagtatacaatgttgtcacattgctgctataga 20265521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 29378509 - 29378577
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||||||| | ||||||| ||||||| ||||||| ||||||| | ||||| |||||| ||||||    
T  29378509 aatttgaacaaattgatattgttctgcgatacgctattttgtacaaagtattgtctaatagcggctata 29378577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 29728763 - 29728827
Alignment:
Q  38 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||  |||||||||||||||| ||| || ||||||||| |||| ||||||||| |||||||    
T  29728763 gaacaaactgctattgttttgcgatttgcaatgtagtacaaagtgttctcaaatagcggctatag 29728827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 97
Target Start/End: Original strand, 12749997 - 12750028
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||||||||||||||||||||||||||||||    
T  12749997 ctatttagtacaaaatgttgtcaaatagcagc 12750028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 16733773 - 16733711
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||| |||| ||||||||| ||||||  ||||||||||||| | |||| ||||||||    
T  16733773 gaaatttgaataaattgctattgttctgcgattcgctatttagtacacagtgttttcaaatag 16733711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 29415802 - 29415748
Alignment:
Q  39 aacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||| ||||||||| || |||||||  || ||||||||||||||||||||||    
T  29415802 aacaaattgctattgttctgtgatatgccgttcagtacaaaatgttgtcaaatag 29415748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 31235251 - 31235209
Alignment:
Q  59 cgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||| ||||||| |||| |||||||||||||||||||||    
T  31235251 cgatatgcaatttagttcaaagtgttgtcaaatagcagctata 31235209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 18104051 - 18104112
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||| |||||||||||||||||||  |||||  ||||| ||| |||||| ||||||||||||    
T  18104051 aattagaacaaatcgctattgtttcacgatacactattcagttcaaaatcttgtcaaatagc 18104112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 102
Target Start/End: Complemental strand, 25694470 - 25694401
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||  |||||| ||| ||||||| |  ||| ||||||||||||||||||||||  |||||||    
T  25694470 aatttgaacaacccgctatcgttctgcgataagtgattcagtacaaaatgttgtcaaatagacgctatag 25694401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 95
Target Start/End: Original strand, 44460364 - 44460393
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagca 95  Q
    ||||||||||||||||||||||||||||||    
T  44460364 ctatttagtacaaaatgttgtcaaatagca 44460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 101
Target Start/End: Complemental strand, 31246993 - 31246953
Alignment:
Q  61 atatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||| ||||||| ||||||||||||||||||||| ||||    
T  31246993 atatgcaatttagttcaaaatgttgtcaaatagcagttata 31246953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 32562372 - 32562450
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||| ||||||||||| || |||||||  |||||||||||||  |||| ||||| ||| |||||| ||||||||||    
T  32562372 aaatttgaa-aaatcgctattattctgcgatacactatttagtacaagttgttatcaaacagc-gctataaaggcgctata 32562450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 33623735 - 33623675
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||| |||||||| ||||||||   | ||||||||||||||||||| |||||||| ||||    
T  33623735 aattttaacaaatcactattgttccactatatgctatttagtacaaagtgttgtcatatag 33623675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 109
Target Start/End: Complemental strand, 35538104 - 35538056
Alignment:
Q  61 atatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgct 109  Q
    ||||||| |||| ||||||||||||||||||| | ||||||| ||||||    
T  35538104 atatgctctttaatacaaaatgttgtcaaataacggctatagcggcgct 35538056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 36300414 - 36300442
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||||||||||||||||||    
T  36300414 gctatttagtacaaaatgttgtcaaatag 36300442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 38475860 - 38475936
Alignment:
Q  26 gtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||| || |||||  |||||||||||||  |||||||||||| |||  |||| |||||| |||||| ||||||||    
T  38475860 gtagtggaacttgaatcaatcgctattgttccgcgatatgctatgtaggtcaaagtgttgttaaatagtagctatag 38475936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 42172865 - 42172801
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||||||||||||| | | ||| ||| ||| |||| | | ||||||||||||||||||||||||    
T  42172865 aatttgaacaaatcgttgtagttctgccatacgctagtaattacaaaatgttgtcaaatagcagc 42172801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 25252041 - 25252109
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||| |||||| | |||| ||||||||||||||||||||||| |||| |||||||||    
T  25252041 atttgaacaaatcgctcttgtttcgtgatacgctatttagtacaaaatgttgtctaataacagctatag 25252109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 32251078 - 32251006
Alignment:
Q  21 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||| ||||||||||||| |||||||||||| ||| ||| |||||||||||||||||| ||| ||||||    
T  32251078 atagcgtactgaaatttgaacacatcgctattgttatgcaataagctatttagtacaaaatgctgtgaaatag 32251006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 50402710 - 50402635
Alignment:
Q  37 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||| ||||||||  || ||||||||||||||| ||| ||||||||||||||||||||||  ||||||||    
T  50402710 tgaacaaatcactattgttccgcaatatgctatttagtataaagtgttgtcaaatagcagctatagctgcgctata 50402635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 43381176 - 43381245
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||| ||||||||||| ||  ||||||||| ||||| |||||||||||||||||||| ||||||||    
T  43381176 aatttgaataaatcgctattattccgcgatatgcaatttaatacaaaatgttgtcaaatagaagctatag 43381245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 15802573 - 15802637
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    |||||||||||||||||||| ||  |||||||| ||| ||||||||| |||||||||||||||||    
T  15802573 aatttgaacaaatcgctattcttccgcgatatgttatatagtacaaagtgttgtcaaatagcagc 15802637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 38692510 - 38692427
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||| |||| | |||||||||||| ||||| |||||||| |||  | |||||||||||| |||||||||||||| |||||||    
T  38692510 ctatagggtagcggaatttgaacaaaccgctagtgttttgcaatacacgatttagtacaaagtgttgtcaaatagcggctatag 38692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 50251591 - 50251516
Alignment:
Q  58 gcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaatt 133  Q
    |||||||||||||||||| |||||||||||||||||| ||||||  ||||||| |  | |||||| ||||||||||    
T  50251591 gcgatatgctatttagtagaaaatgttgtcaaatagctgctataacggcgctaaagcattattgtgtagcggaatt 50251516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 53855791 - 53855744
Alignment:
Q  47 gctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  53855791 gctattgttctgcaatatgctatttagtacaaaatgttgtcaaatagc 53855744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 21754221 - 21754299
Alignment:
Q  16 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||  |||| |||||||  ||||||||||||||||  ||||||  |||||||||||||| ||||||||||||||    
T  21754221 ccactatattgtagcgaaatttagacaaatcgctattgttccgcgatacactatttagtacaaattgttgtcaaatagc 21754299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 25490545 - 25490602
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    |||||||||||| |||||| | || |||||| ||||||||||||||||||||||||||    
T  25490545 tttgaacaaatcactattgatctgtgatatgatatttagtacaaaatgttgtcaaata 25490602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 87
Target Start/End: Original strand, 14199985 - 14200053
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtc 87  Q
    ||||||| ||||| ||||||||||||  |||| |||| ||||||||||||||| ||||||| |||||||    
T  14199985 ctatagcttagtgtaatttgaacaaactgctaatgttctgcgatatgctatttggtacaaagtgttgtc 14200053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 48236363 - 48236287
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||| | ||| |||||||||||||||| || || ||| | |||||||||||||||  |||||||||||||||||    
T  48236363 cactataacatagcgaaatttgaacaaatcactgttatttcgggatatgctatttagtgtaaaatgttgtcaaatag 48236287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 10275894 - 10275819
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtac-aaaatgttgtcaaatag 93  Q
    ||||||| ||||| ||||||||||||||  | ||||| |||||||||||||||| ||| ||||| |||||||||||    
T  10275894 ctatagcatagtggaatttgaacaaatcattgttgttctgcgatatgctatttattacaaaaatattgtcaaatag 10275819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 2991045 - 2990983
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||||  || |||||   ||||| |||||||||||||||||||||||||||||    
T  2991045 gaaatttgaacaaatttcttttgttccacgatacgctatttagtacaaaatgttgtcaaatag 2990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 6994327 - 6994393
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||| ||||| |||||| | |||||||| || |||||||||||||| ||| |||||||||||||||    
T  6994327 tagtggaatttaaacaaaacactattgttatgggatatgctatttagcacagaatgttgtcaaatag 6994393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 11338510 - 11338573
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctattta--gtacaaaatgttgtcaaatagc 94  Q
    |||||| |||| ||||| ||||| ||||||||||||||||   |||||||||||||||||||||    
T  11338510 aatttggacaagtcgctgttgttctgcgatatgctatttaatatacaaaatgttgtcaaatagc 11338573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 16169232 - 16169188
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaa 78  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||    
T  16169232 atttgaactaatcgctattgttctgcgatatgctattgagtacaa 16169188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 29279205 - 29279293
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctattt-agtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgt 122  Q
    |||||||||||| ||||||||| | |||||| ||||| | ||||  | ||||||||||||| ||||| | |||||||||| ||||||||    
T  29279205 tttgaacaaatcactattgtttcgtgatatgatattttaatacagcaagttgtcaaatagcggctatggcggcgctataacactattgt 29279293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 31386136 - 31386057
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 113  Q
    ||||||||||||| | || ||||||| |||| | |||||||| |||| |||||||||||| ||||||||||  ||||||||    
T  31386136 aatttgaacaaatagttaatgttttgtgata-gttatttagttcaaagtgttgtcaaataacagctatagaaccgctataa 31386057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 51295684 - 51295736
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtc 87  Q
    ||||| ||||||| |||||||| | |||| |||||||||||||||||||||||    
T  51295684 tttgatcaaatcgttattgtttcgtgatacgctatttagtacaaaatgttgtc 51295736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 54842244 - 54842196
Alignment:
Q  46 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||| || |||| ||||||||||| ||||||||||||||||||    
T  54842244 cgctattgttctgtgatacgctatttagtataaaatgttgtcaaatagc 54842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 27016970 - 27016927
Alignment:
Q  48 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||    
T  27016970 ctattattttgtgatatactatttagtacaaaatgttgtcaaat 27016927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 20690139 - 20690081
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||||||||||  ||||||  ||||||||  ||||||||| ||||||||    
T  20690139 tttgaacaaatcgctattgttcggcgatacactatttagagcaaaatgttatcaaatag 20690081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 112
Target Start/End: Original strand, 42064160 - 42064218
Alignment:
Q  54 ttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||| |||||||||||||||| ||||||||||| || || || | |||||||||    
T  42064160 ttttgcgatctgctatttagtacaaagtgttgtcaaatggctgccattgcggcgctata 42064218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 48198141 - 48198079
Alignment:
Q  18 actatagcgtagt-gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 79  Q
    |||||||| |||| ||| ||||||| ||||||||||||| || |||||| |||||||||||||    
T  48198141 actatagcttagtagaattttgaactaatcgctattgttctgtgatatgttatttagtacaaa 48198079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 113
Target Start/End: Original strand, 1813265 - 1813349
Alignment:
Q  28 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 113  Q
    |||| |||||||||||||| ||||||||  ||||||||| | |||| || || |||||||||||||  ||||||| ||| ||||||    
T  1813265 agtggaatttgaacaaatcactattgttccgcgatatgcca-ttagcacgaagtgttgtcaaatagtggctatagcggcactataa 1813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 24830135 - 24830196
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    |||| ||||| |||||||||||||| | | |||  |||||||||| ||||||||||||||||    
T  24830135 gaaagttgaaaaaatcgctattgttctacaatacactatttagtataaaatgttgtcaaata 24830196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 32954243 - 32954328
Alignment:
Q  16 ccactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||| ||| | |||||| |||||| ||| || ||   | ||| |||||||||||||||||||||||| |||| |||||||    
T  32954243 ccactatagcatagcggaatttggacaaattgcttttattccacaatacgctatttagtacaaaatgttgtcatatagaagctata 32954328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 39544175 - 39544208
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagcta 99  Q
    ||||||||||||||||||||||||| ||||||||    
T  39544175 ctatttagtacaaaatgttgtcaaagagcagcta 39544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 43307673 - 43307600
Alignment:
Q  48 ctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattg 121  Q
    ||||||||||| |||| ||| |||||||||||||||||| | ||||  | ||||| |||||||||  |||||||    
T  43307673 ctattgttttgtgatacgctgtttagtacaaaatgttgttagatagtggttatagtggcgctatagcactattg 43307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 50376264 - 50376231
Alignment:
Q  69 tttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||||||||||||| |||||||    
T  50376264 tttagtacaaaatgttgtcaaatagcggctatag 50376231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 162903 - 162963
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||| | |||| || ||||||  ||||||||||||||||| |||| ||||||    
T  162903 aatttgaacaaattgttattattctgcgatgcgctatttagtacaaaatattgtgaaatag 162963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 29208265 - 29208325
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||||| |||||||   ||||| ||| |||||||||||||||| | ||||||    
T  29208265 aatttgaacaaatcgttattgttccacgatacgctgtttagtacaaaatgttttgaaatag 29208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 94
Target Start/End: Original strand, 34363256 - 34363284
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||||||||||||||||||    
T  34363256 ctatttagtacaaaatgttgtcaaatagc 34363284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 33120617 - 33120560
Alignment:
Q  37 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||||| | ||||| ||| ||||||||||||||||||||||||||||||||||    
T  33120617 tgaacaaatcgttgttgttctgcaatatgctatttagtacaaaatgttgtcaaatagc 33120560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 2302766 - 2302706
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||||||||||| |||||||  |||||||| |||||||||||||||||| ||||||||    
T  2302766 aatttgaacaaatcgatattgttaggcgatatgttatttagtacaaaatgttatcaaatag 2302706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 27483037 - 27483149
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 118  Q
    ||||| ||||| | |||||||||||| ||||||| || || |||| |||||  |||||||||| |||||||||||| ||||||| ||| |||||  ||||    
T  27483037 ctataacgtagaggaatttgaacaaaccgctattattctgagatacgctatccagtacaaaatattgtcaaatagcggctatagtggcactatagcacta 27483136  T
Q  119 ttgtatagcggaa 131  Q
    ||| | |||||||    
T  27483137 ttgcacagcggaa 27483149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 33 - 123
Target Start/End: Original strand, 30560088 - 30560179
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaa-tgttgtcaaatagcagctatagaggcgctataatactattgta 123  Q
    |||||| ||||| | ||||||||||||||||  |||||||||| |||| ||||||||||| |||||||||| ||| |||||  |||||||||    
T  30560088 aatttggacaaaccactattgttttgcgatacactatttagtaaaaaaatgttgtcaaattgcagctatagtggcactatagcactattgta 30560179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 26273114 - 26273036
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagc 97  Q
    ||||||||||| | |||||||| ||||| |||||||| || |||| ||| ||||||||||| ||||||| |||||||||    
T  26273114 ctatagcgtagaggaatttgaataaatcactattgttctgtgatacgctgtttagtacaaagtgttgtccaatagcagc 26273036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 8282910 - 8282849
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||||||| |||||||| ||| ||||||| ||||| ||||||||||| |||||||||    
T  8282910 aatttgaacaaatagctattgtcttgtgatatgcgatttattacaaaatgttctcaaatagc 8282849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 21226911 - 21227004
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||| ||| | ||||||||||||  |||||||||   | ||| |||||| ||||||||||||||||||||||| |||||||  ||||||||    
T  21226911 ctatagcatagcggaatttgaacaaaaagctattgttcctccatacgctattcagtacaaaatgttgtcaaatagctgctatagtagcgctata 21227004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 37632205 - 37632120
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||| ||||||||| |||| |||||||||| || ||||   ||||| |||||||| ||||||||| | |||||||||||||||||    
T  37632205 cactacagcgtagtggaattggaacaaatcgttactgttccacgatacgctatttattacaaaatggtatcaaatagcagctatag 37632120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 45371159 - 45371098
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||| ||||| | ||||||||  || ||||||||||||||||||||||||||||||||||    
T  45371159 aatttggacaaaccactattgttccgcaatatgctatttagtacaaaatgttgtcaaatagc 45371098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 4050427 - 4050511
Alignment:
Q  18 actatagcgtagtgaaatttgaacaaa-tcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||||| | |||||||| ||| ||| ||||||||  | |||||||||||||| |||||| |||||||||||||| ||||    
T  4050427 actatagcgtagcggaatttgaaaaaaatcgttattgtttcaccatatgctatttagtccaaaatattgtcaaatagcaggtata 4050511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 27400521 - 27400604
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||||| | ||| |||||||||||||||||||||||  ||  ||||||||  |||||||||| | |||||||| |||||||    
T  27400521 cactatagcatggtggaatttgaacaaatcgctattgttccgcagtatgctataaagtacaaaatatcgtcaaataacagctat 27400604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 13869884 - 13869826
Alignment:
Q  54 ttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||| ||||||||||||||||||||||||||||||| ||  || ||||||| ||||||    
T  13869884 ttttgtgatatgctatttagtacaaaatgttgtcaaacagtggcaatagaggtgctata 13869826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 30692517 - 30692459
Alignment:
Q  36 ttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||| |  ||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  30692517 ttgaacaaaccaatattgttttgccatatgctatgtagtacaaagtgttgtcaaatagc 30692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 112
Target Start/End: Original strand, 29749219 - 29749300
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||||||||  |||||||||| |||||| ||  ||||| ||| |||||| ||||||||| |||||  ||||||||    
T  29749219 gaaatttgaacaaatcattattgttttgtgatatgttaactagtaaaaagtgttgttaaatagcagttatagcagcgctata 29749300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 3556718 - 3556650
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaatt 133  Q
    ||||||||| |||||||||||||||||||  | || || |||||||||| || ||||| ||||||||||    
T  3556718 gctatttagcacaaaatgttgtcaaatagttgttacagtggcgctataacaccattgtgtagcggaatt 3556650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 112
Target Start/End: Complemental strand, 40710160 - 40710077
Alignment:
Q  28 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||| |||||||||||||   ||||||| |||||| || |||| |||||||||||||| | |||||||||||||| || ||||||    
T  40710160 agtggaatttgaacaaattattattgttatgcgatgtgttatt-agtacaaaatgttgactaatagcagctatagtggtgctata 40710077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 111
Target Start/End: Complemental strand, 13851079 - 13850991
Alignment:
Q  21 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctat 111  Q
    ||||||||| | ||||||| ||| | ||||||  |||| ||||| ||||||||||||||||||| ||||||||  || ||||||| |||||    
T  13851079 atagcgtagaggaatttgagcaagttgctatt--tttgtgatatactatttagtacaaaatgttatcaaatagtggcaatagaggtgctat 13850991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 18737690 - 18737733
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagt 74  Q
    ||||||||||||||| |||||||||| | |||||||||||||||    
T  18737690 gaaatttgaacaaattgctattgtttcgggatatgctatttagt 18737733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 24855602 - 24855531
Alignment:
Q  21 atagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    ||||||||| | |||||||||||||| |||||||| |||  ||| ||||||||||| |||  ||||||||||    
T  24855602 atagcgtagcggaatttgaacaaatcactattgttctgcagtatactatttagtactaaaaattgtcaaata 24855531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 26445574 - 26445499
Alignment:
Q  37 tgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||||| || |||||| | |||   ||||||||||||||  ||||||||||||||| ||||| |||||||||    
T  26445574 tgaacaaatcacttttgtttcgtgatccactatttagtacaaagcgttgtcaaatagcagttatagtggcgctata 26445499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 32616828 - 32616769
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||| ||||  ||| |||| |||||||||||||||||| | |||||||||||    
T  32616828 atttgaacaaattgctacagttctgcgttatgctatttagtacaaagtattgtcaaatag 32616769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 44617697 - 44617732
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||||||| |||||||||||||||||||||    
T  44617697 ctatttagtacaaagtgttgtcaaatagcagctata 44617732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 9112412 - 9112478
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||| ||||| | || ||| |||||||| ||||||||||||||||||||| ||| |||| ||||||    
T  9112412 tagtggaatttaaccagatcactattgttctgcgatatgctatttagtacagaatattgtgaaatag 9112478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 12196923 - 12196992
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||| |||||| ||||||||||| || ||||| | ||||||||||  |||||| |||||||||||||||    
T  12196923 aaattttaacaaaccgctattgtttcgctatatg-tgtttagtacaatgtgttgtaaaatagcagctatag 12196992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 102
Target Start/End: Original strand, 12441351 - 12441420
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||| |||||| ||||||||||| || ||||| | ||||||||||  |||||| |||||||||||||||    
T  12441351 aaattttaacaaaccgctattgtttcgctatatg-tgtttagtacaatgtgttgtaaaatagcagctatag 12441420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 98
Target Start/End: Complemental strand, 24857365 - 24857327
Alignment:
Q  60 gatatgctatttagtacaaaatgttgtcaaatagcagct 98  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  24857365 gatatgctattttgtacaaaatgttgtcaaatagaagct 24857327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 2701657 - 2701749
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||| | ||| |||||||||||||| ||||  || ||||||||||| ||||||| | |||||  ||||| | ||||| |||||||||    
T  2701657 ctatagcgtagcggaatatgaacaaatcgctaatgttccgcaatatgctattttgtacaaattattgtc-gatagccgttatagcggcgctata 2701749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 4114736 - 4114796
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||| |||||||| | ||||| | || ||| |||||||||||||||||||||    
T  4114736 aatttgaacaaatcactattgttctacgataag-tagttactacaaaatgttgtcaaatagc 4114796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 14928301 - 14928232
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    |||| ||||||||||||||||||||  |||||||    |||| |||||| |||||||| |||||||||||    
T  14928301 tagcttagtgaaatttgaacaaatctttattgttacatgatacgctattaagtacaaagtgttgtcaaat 14928232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 96
Target Start/End: Original strand, 16950289 - 16950318
Alignment:
Q  67 tatttagtacaaaatgttgtcaaatagcag 96  Q
    ||||||||||||||||||||||||||||||    
T  16950289 tatttagtacaaaatgttgtcaaatagcag 16950318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 42843363 - 42843424
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||| |||||||||  | |||| |||||| |||| ||| |||||||||||||    
T  42843363 aaatttgaacaaattgctattgttccgggataagctattaagtataaattgttgtcaaatag 42843424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 44806258 - 44806319
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||||||  |||| | |||  ||||| ||||||||||||||| ||||||||||||||    
T  44806258 aatttgaacaaactgctactatttcacgataggctatttagtacaaagtgttgtcaaatagc 44806319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 1318716 - 1318620
Alignment:
Q  17 cactatagcgt-agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||| | || ||||||||||| ||  |||||||  || ||| ||||||||| || | ||||||||||||||||||| ||| | |||||||    
T  1318716 cactatagcgtgaatggaatttgaacaagtccttattgttccgcaataagctatttagaactacatgttgtcaaatagcagctgtagtgacgctata 1318620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 3238345 - 3238297
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaat 81  Q
    ||||||||| ||||||||||||| ||| ||||| || ||||||||||||    
T  3238345 aatttgaactaatcgctattgttctgcaatatgttaattagtacaaaat 3238297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 8284420 - 8284356
Alignment:
Q  22 tagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgt 86  Q
    |||| ||||| |||||||||||||| | ||||||  |||||| ||| ||||||||||| ||||||    
T  8284420 tagcatagtggaatttgaacaaatcaccattgttccgcgatacgctttttagtacaaagtgttgt 8284356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 12856481 - 12856408
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    ||||||| ||||||| ||||||||||||| || ||||  || ||||| ||||||||||||||| | |||| |||||    
T  12856481 cactataccgtagtggaatttgaacaaattgcaattg--ttacgatacgctatttagtacaaactattgttaaata 12856408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 14730294 - 14730378
Alignment:
Q  18 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||| | ||||||||| || |||||| ||||| | | |||| ||| |||||||||| |  |||||||||||| ||||||    
T  14730294 actatagcgtggcgaaatttgatcagatcgctgttgttctacaatatactacttagtacaaagtactgtcaaatagcatctatag 14730378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 39550949 - 39551021
Alignment:
Q  40 acaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||| ||||||||||||| ||||  ||||| ||||  || |||||||||||||| ||||||| ||| |||||    
T  39550949 acaaaccgctattgttttgtgatacactattgagtatgaagtgttgtcaaatagcggctatagtggcactata 39551021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 43935226 - 43935142
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||| || ||||| |||||||||||||  ||||||||  | |||| ||| ||||| ||||||| |||| |||||||| |||||    
T  43935226 cactattgcatagtggaatttgaacaaatgactattgttccgtgatacgctgtttagcacaaaatattgtgaaatagcaactata 43935142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 415145 - 415214
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||| |||||||||||| | ||| ||||||||||||||||||||||| ||||||  |||||||    
T  415145 aatttgaacaagtcgctattgtttcgtgatttgctatttagtacaaaatgttgtgaaatagttgctatag 415214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 55314493 - 55314554
Alignment:
Q  30 tgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaat 91  Q
    |||||||||||||||| ||||||||| |||||||||||| |||||||||| |||| ||||||    
T  55314493 tgaaatttgaacaaattgctattgttctgcgatatgctaattagtacaaagtgttatcaaat 55314554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 13298529 - 13298589
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||| |||||||| || |||||||||||||||||||| || ||||||||||    
T  13298529 aatttgaacaaatcactattgttctgtgatatgctatttagtacaaagtgctgtcaaatag 13298589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 50794568 - 50794643
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||| |||||||||||||||  |||||| |||  ||||||| |||||||||| |||||||||||||||| |||||    
T  50794568 tagtggaatttgaacaaatcgtcattgttctgcactatgctagttagtacaaagtgttgtcaaatagcagttatag 50794643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 34581592 - 34581658
Alignment:
Q  46 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    ||||||||||  | |||| |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  34581592 cgctattgttccgtgatacgctatttagtacaaaatgttgtcaaatagcggctatagtagcgctata 34581658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 2843636 - 2843583
Alignment:
Q  39 aacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaata 92  Q
    |||||||| |||||||| |||||||  |||||||||||||||||||||||||||    
T  2843636 aacaaatcactattgttctgcgatacactatttagtacaaaatgttgtcaaata 2843583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 3301687 - 3301608
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctata 112  Q
    |||||||| || | ||| |||||||||||||  ||||||||||||| || |||| ||||||||||||||| | |||||||    
T  3301687 aatttgaaaaatttgctgttgttttgcgatactctatttagtacaatattttgttaaatagcagctatagtgacgctata 3301608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 7295045 - 7295176
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaat 132  Q
    |||||||||||||| ||||||||||| |||| |||||||| | |||||  |||||||  ||  |||| | |||||||||| |||| | || | ||||||     
T  7295045 aatttgaacaaatcactattgttttgtgataggctatttaatgcaaaacattgtcaataagtggctacaaaggcgctatagtactgtagtgtcgcggaac 7295144  T
Q  133 tcaaacaaactactatcttctgcgattgacaa 164  Q
    |  ||||||||||||| ||| | |||||||||    
T  7295145 ttgaacaaactactattttccgtgattgacaa 7295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 17223403 - 17223482
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagct 98  Q
    ||||||||||| | ||||| ||||||| | | |||||||||||||  | |||||||||||| |||||||| |||||||||    
T  17223403 ctatagcgtagcggaattttaacaaattgttgttgttttgcgatacacgatttagtacaaattgttgtcatatagcagct 17223482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 20710031 - 20709960
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaa 90  Q
    ||||| ||||| | ||||||||||||||||||||||| ||| ||| |||||||||| |||| |||| |||||    
T  20710031 ctataacgtagcggaatttgaacaaatcgctattgttctgcaatacgctatttagtgcaaagtgttatcaaa 20709960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 25402826 - 25402909
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||   |||||||||| |||||||||||||   |||| | ||| || ||||||||||||||||||||||| |||||    
T  25402826 ctatagcgtagcagaatttgaacagatcgctattgtttaatgatacgatatgtaatacaaaatgttgtcaaatagcagttatag 25402909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 31675093 - 31675030
Alignment:
Q  42 aaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagagg 105  Q
    |||| |||||||| ||| |||| | ||||||||||||||||||||||||| | |||||||||||    
T  31675093 aaattgctattgtcttgtgatacgttatttagtacaaaatgttgtcaaattggagctatagagg 31675030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 27722473 - 27722407
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagcta 99  Q
    ||||||||| ||| |||||||||   |||||||||||| |||||||||| |||||||||| ||||||    
T  27722473 aatttgaactaattgctattgttccacgatatgctattaagtacaaaatattgtcaaatatcagcta 27722407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 34417827 - 34417889
Alignment:
Q  38 gaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||||||| ||||||||| ||||||   |||||||||||||| |||||||||||||| |||||    
T  34417827 gaacaaatagctattgttctgcgatcctctatttagtacaaagtgttgtcaaatagccgctat 34417889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 3144541 - 3144586
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctatagaggcgctat 111  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||    
T  3144541 ctatttagtacaaaatgttgtcaactggcagcgatagaggcgctat 3144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 37538421 - 37538484
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatt---tagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||||||||||||||||| ||||||| |   || |||||| |||||||||||||    
T  37538421 aatttgaacaaatcgctattgttttgcggtatgctacttactattacaaagtgttgtcaaatag 37538484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 37579651 - 37579590
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||| || |||||| |||||||  ||||||||||||||||||| || ||||||||||||||    
T  37579651 aattttaataaatcgttattgttccgcgatatgctatttagtactaagtgttgtcaaatagc 37579590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 93
Target Start/End: Complemental strand, 48244508 - 48244443
Alignment:
Q  28 agtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||| ||||| ||||||||||||||||| |||||||  || |||||||||  ||||||||||||||    
T  48244508 agtggaatttaaacaaatcgctattgttctgcgatacactgtttagtacagtatgttgtcaaatag 48244443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 56049815 - 56049770
Alignment:
Q  68 atttagtacaaaatgttgtcaaatagcagctatagaggcgctataa 113  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||    
T  56049815 atttagtacaaagtgttgtcaaatagcagctatagtagcgctataa 56049770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 1202434 - 1202394
Alignment:
Q  54 ttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  1202434 ttttgcgatatgctatttagtataaaatattgtcaaatagc 1202394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 1276902 - 1276986
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||| | ||| |||||||||||||| | |||||||| || |||| ||| || |||| ||| | |||||||||||||||||||    
T  1276902 cactatatcatagggaaatttgaacaaaccactattgttatgtgatacgctgttcagtaaaaagttttgtcaaatagcagctata 1276986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 2562482 - 2562550
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||||||||||||  |||   |||| ||| ||||||||||||  |||||||||||||||||||    
T  2562482 aatttgaacaaatcgctataatttcctgatacgctgtttagtacaaaacattgtcaaatagcagctata 2562550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 20989525 - 20989561
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||||||||||||||||||||| |||||||    
T  20989525 ctatttagtacaaaatgttgtcaaatagcggctatag 20989561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 143
Target Start/End: Complemental strand, 39032635 - 39032511
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatacta 118  Q
    ||||||||||||| | |||||||||| ||||| || |  | |||||| ||||| ||||||||||||||| ||||   |||| || |||||||||  ||||    
T  39032635 ctatagcgtagtggagtttgaacaaaccgctaatgctccgtgatatgttatttggtacaaaatgttgtcgaataatggctacaggggcgctatagcacta 39032536  T
Q  119 ttgtatagcggaattcaaacaaact 143  Q
    |||  |||| |||||  ||||||||    
T  39032535 ttgcgtagcagaatttcaacaaact 39032511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 13458866 - 13458783
Alignment:
Q  17 cactatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||| | |||||||||||||||||||| | ||||||  |  ||| ||||||||||| ||| ||||||||||| ||| ||||    
T  13458866 cactatatcatagtgaaatttgaacaaatcaccattgttccgtaatacgctatttagtataaagtgttgtcaaatggcaactat 13458783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 101
Target Start/End: Original strand, 18968308 - 18968343
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    ||||||||||||||||||||||||||||| ||||||    
T  18968308 ctatttagtacaaaatgttgtcaaatagcggctata 18968343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 19062274 - 19062218
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||| |||||||||||  ||||||||||||||||||| | |||| ||||||    
T  19062274 tttgaacaaatctctattgttttg--atatgctatttagtacaaagttttgtaaaatag 19062218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 58
Target Start/End: Complemental strand, 39064935 - 39064896
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttg 58  Q
    ||||||||||||| ||||||||||||| ||||||||||||    
T  39064935 ctatagcgtagtggaatttgaacaaattgctattgttttg 39064896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 47789165 - 47789232
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    ||||||||||||| ||| ||| ||| |||  |||||||||||||| |||||||||||||  |||||||    
T  47789165 tttgaacaaatcgttatcgttctgcaatactctatttagtacaaactgttgtcaaatagtggctatag 47789232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 26275600 - 26275534
Alignment:
Q  34 atttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||||||||||||||||||     ||| ||||||||||||||||| |||| ||||||| |||||    
T  26275600 atttgaacaaatcgctattgttccaaaatacgctatttagtacaaaatattgtgaaatagcggctat 26275534  T

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Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 33714294 - 33714228
Alignment:
Q  27 tagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||| ||||||||||||||||| |||||   ||||| || |||||||||||||| |||| ||||||    
T  33714294 tagtggaatttgaacaaatcgctgttgttccacgataagccatttagtacaaaatattgtgaaatag 33714228  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 100
Target Start/End: Original strand, 34417346 - 34417400
Alignment:
Q  46 cgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    ||||||||||  |||||  ||||||||||||||| |||||||||||||| |||||    
T  34417346 cgctattgttccgcgatccgctatttagtacaaagtgttgtcaaatagccgctat 34417400  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 38596717 - 38596771
Alignment:
Q  32 aaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgt 86  Q
    ||||||||| ||||||||| ||||||||||||  ||||| |||||||||| ||||    
T  38596717 aaatttgaagaaatcgctactgttttgcgatacactattcagtacaaaatattgt 38596771  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 4762580 - 4762551
Alignment:
Q  65 gctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||||||||||||||||||||||||||||    
T  4762580 gctatttagtacaaaatgttgtcaaatagc 4762551  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 9318706 - 9318759
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgt 86  Q
    |||||||||||||   |||||||| | |||||||||||||||||||||| ||||    
T  9318706 aatttgaacaaattcatattgtttagtgatatgctatttagtacaaaatattgt 9318759  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 47486106 - 47486045
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    |||||||||||| | ||||||||  |||| ||||||||||||||||||| || | |||||||    
T  47486106 aatttgaacaaacctctattgttccgcgacatgctatttagtacaaaatattttgaaatagc 47486045  T

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Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 53768266 - 53768201
Alignment:
Q  35 tttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||||||||| ||||||||||    ||| |||||| ||||||||  ||||||||||||||||||||    
T  53768266 tttgaacaaaccgctattgttccatgatctgctatatagtacaacgtgttgtcaaatagcagctat 53768201  T

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Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 681986 - 682030
Alignment:
Q  49 tattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    ||||||| |||||| ||||| ||||||||| ||||||||||||||    
T  681986 tattgttctgcgatgtgctagttagtacaacatgttgtcaaatag 682030  T

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Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 3625744 - 3625804
Alignment:
Q  19 ctatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaa 79  Q
    |||||| |||||| |||||||||| |||||||||||| ||| ||| ||| | |||||||||    
T  3625744 ctatagtgtagtggaatttgaacagatcgctattgttctgcaatacgctgtgtagtacaaa 3625804  T

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Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 8721961 - 8721885
Alignment:
Q  57 tgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaatt 133  Q
    ||||||| ||||||||||||||||| ||||| ||| | |||||||| | ||||||   |||||||  ||||||||||    
T  8721961 tgcgatacgctatttagtacaaaatattgtcgaatggaagctatagtgtcgctatggcactattgcgtagcggaatt 8721885  T

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Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 30617329 - 30617270
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||||||||||||||||| |||| || |||| |||| |||||||||||| |||| ||||||    
T  30617329 aatttgaacaaatcgctagtgttctgtgatacgcta-ttagtacaaaatattgtgaaatag 30617270  T

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Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 34416907 - 34416967
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatag 93  Q
    |||| |||||||| |||||||||  |||||   |||||||||||||| |||||||||||||    
T  34416907 aattggaacaaatagctattgttccgcgatcctctatttagtacaaagtgttgtcaaatag 34416967  T

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Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 37854047 - 37854003
Alignment:
Q  58 gcgatatgctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||||| ||||| |||| |||||| ||||||||    
T  37854047 gcgatatgctatttagtataaaattttgttaaatagaagctatag 37854003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 102
Target Start/End: Original strand, 41367197 - 41367233
Alignment:
Q  66 ctatttagtacaaaatgttgtcaaatagcagctatag 102  Q
    |||||||||||||||||||| |||||||||| |||||    
T  41367197 ctatttagtacaaaatgttgccaaatagcagttatag 41367233  T

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Target: scaffold0428 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 129
Target Start/End: Complemental strand, 11518 - 11459
Alignment:
Q  70 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 129  Q
    ||||| ||||||||||| |||||||| |||||| |||||||||| |||||||| ||||||    
T  11518 ttagtgcaaaatgttgtgaaatagcatctatagtggcgctataaaactattgtgtagcgg 11459  T

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Target: scaffold0428; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 4494 - 4553
Alignment:
Q  70 ttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcgg 129  Q
    ||||| ||||||||||| |||||||| |||||| || ||||||| |||||||| ||||||    
T  4494 ttagtgcaaaatgttgtgaaatagcatctatagtggtgctataaaactattgtgtagcgg 4553  T

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Target: scaffold0940 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 100
Target Start/End: Original strand, 2031 - 2113
Alignment:
Q  18 actatagcgtagtgaaatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctat 100  Q
    |||||| | ||| |||||||| ||||| |  | ||||| |||||||||||||||| |||||| |||||||||||||| |||||    
T  2031 actatatcatagcgaaatttggacaaaccattgttgttctgcgatatgctatttaatacaaagtgttgtcaaatagctgctat 2113  T

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Target: scaffold0491 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 4389 - 4432
Alignment:
Q  31 gaaatttgaacaaatcgctattgttttgcgatatgctatttagt 74  Q
    ||||||||||||||| |||||||||| | |||||||||||||||    
T  4389 gaaatttgaacaaattgctattgtttcgggatatgctatttagt 4432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 101
Target Start/End: Original strand, 96701 - 96735
Alignment:
Q  67 tatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||||||||||||||||||||| ||||||    
T  96701 tatttagtacaaaatgttgtcaaatagcggctata 96735  T

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Target: scaffold0898 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0898
Description:

Target: scaffold0898; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 534 - 594
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagc 94  Q
    ||||| |||||| | |||||||| || |||| ||||||||||||||| ||||||||||||||    
T  534 aatttaaacaaacctctattgttctgggata-gctatttagtacaaattgttgtcaaatagc 594  T

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Target: scaffold0223 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 164
Target Start/End: Complemental strand, 10740 - 10608
Alignment:
Q  33 aatttgaacaaatcgctattgtt-ttgcgatatgctatttagtacaaaatgttgtcaaatagcagctatagaggcgctataatactattgtatagcggaa 131  Q
    ||||||| ||||||  ||||||| ||| ||||  ||| |||||| ||||| |||| || |||  |||||||||||  ||||||||| ||| ||||| |||    
T  10740 aatttgagcaaatcattattgttcttgtgataaactaattagtataaaatattgtaaagtagaggctatagaggcattataatactgttgcatagcagaa 10641  T
Q  132 ttcaaacaaactactatcttctgcgattgacaa 164  Q
    ||  |||||||  |||| |||||||||| ||||    
T  10640 tttgaacaaaccgctattttctgcgattcacaa 10608  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 33 - 101
Target Start/End: Original strand, 13786 - 13854
Alignment:
Q  33 aatttgaacaaatcgctattgttttgcgatatgctatttagtacaaaatgttgtcaaatagcagctata 101  Q
    |||||||||||||| ||||||||   | ||||||  ||||||||| | |||||||||||| ||||||||    
T  13786 aatttgaacaaatctctattgttccacaatatgccgtttagtacatagtgttgtcaaataacagctata 13854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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