View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16173_low_6 (Length: 224)

Name: NF16173_low_6
Description: NF16173
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16173_low_6
NF16173_low_6
[»] chr6 (34 HSPs)
chr6 (73-172)||(28675320-28675418)
chr6 (73-172)||(17705264-17705361)
chr6 (71-172)||(2309216-2309316)
chr6 (73-172)||(17175816-17175914)
chr6 (73-172)||(32702377-32702475)
chr6 (73-172)||(33696869-33696967)
chr6 (72-172)||(18365368-18365467)
chr6 (72-172)||(18370632-18370731)
chr6 (73-172)||(29693617-29693716)
chr6 (70-172)||(33695118-33695219)
chr6 (75-164)||(11548386-11548474)
chr6 (73-172)||(23290876-23290974)
chr6 (75-171)||(6031537-6031632)
chr6 (74-140)||(34238883-34238948)
chr6 (105-172)||(18889470-18889537)
chr6 (115-172)||(6127449-6127506)
chr6 (77-150)||(25986934-25987007)
chr6 (71-152)||(582520-582602)
chr6 (77-150)||(17176009-17176082)
chr6 (77-150)||(17705453-17705526)
chr6 (77-150)||(33695315-33695388)
chr6 (77-150)||(33696700-33696773)
chr6 (71-127)||(2121002-2121058)
chr6 (77-150)||(6127279-6127352)
chr6 (77-150)||(23291072-23291145)
chr6 (77-150)||(28675152-28675225)
chr6 (108-172)||(8515556-8515620)
chr6 (77-140)||(8515723-8515786)
chr6 (79-150)||(11548576-11548647)
chr6 (77-150)||(18365561-18365634)
chr6 (77-150)||(18370825-18370898)
chr6 (77-150)||(6031729-6031802)
chr6 (143-172)||(9752110-9752139)
chr6 (77-150)||(18889685-18889757)
[»] chr2 (39 HSPs)
chr2 (71-172)||(9293368-9293468)
chr2 (73-172)||(22592882-22592983)
chr2 (71-172)||(10662060-10662160)
chr2 (73-172)||(13355020-13355118)
chr2 (71-172)||(33380379-33380479)
chr2 (72-172)||(35160931-35161030)
chr2 (71-172)||(7475301-7475401)
chr2 (77-172)||(3989248-3989342)
chr2 (105-172)||(16767288-16767355)
chr2 (73-172)||(23267857-23267955)
chr2 (76-172)||(31174633-31174728)
chr2 (73-164)||(43331092-43331182)
chr2 (75-164)||(21393483-21393570)
chr2 (71-164)||(9723586-9723679)
chr2 (77-150)||(14941354-14941427)
chr2 (94-164)||(37335824-37335894)
chr2 (77-150)||(9723409-9723482)
chr2 (85-150)||(27847644-27847709)
chr2 (113-164)||(34320991-34321042)
chr2 (114-172)||(14941199-14941257)
chr2 (77-150)||(9293564-9293637)
chr2 (85-150)||(31174822-31174887)
chr2 (105-172)||(21936254-21936321)
chr2 (77-150)||(7475496-7475569)
chr2 (77-150)||(10661891-10661964)
chr2 (77-150)||(21936085-21936158)
chr2 (77-150)||(23268050-23268123)
chr2 (77-150)||(35160761-35160834)
chr2 (77-150)||(43330916-43330989)
chr2 (101-149)||(37335741-37335789)
chr2 (73-172)||(40262531-40262629)
chr2 (73-113)||(27847791-27847831)
chr2 (71-119)||(39819272-39819319)
chr2 (85-150)||(13354858-13354923)
chr2 (1-30)||(16767119-16767148)
chr2 (1-30)||(16767256-16767285)
chr2 (77-150)||(21393676-21393749)
chr2 (85-138)||(22591494-22591547)
chr2 (77-150)||(33380211-33380284)
[»] chr4 (53 HSPs)
chr4 (73-172)||(21802115-21802213)
chr4 (73-172)||(42671840-42671939)
chr4 (73-171)||(11314046-11314144)
chr4 (71-172)||(36073521-36073621)
chr4 (73-164)||(10442582-10442672)
chr4 (73-172)||(22199431-22199529)
chr4 (73-172)||(46442016-46442114)
chr4 (75-172)||(17655602-17655699)
chr4 (71-172)||(44893598-44893698)
chr4 (73-172)||(37934736-37934835)
chr4 (73-172)||(44893008-44893106)
chr4 (73-172)||(50156374-50156471)
chr4 (73-172)||(53123203-53123301)
chr4 (75-172)||(9089042-9089138)
chr4 (75-172)||(24128411-24128507)
chr4 (73-165)||(47290245-47290336)
chr4 (73-172)||(2625009-2625107)
chr4 (73-172)||(33530479-33530577)
chr4 (73-172)||(36073123-36073221)
chr4 (73-172)||(37219803-37219902)
chr4 (73-172)||(49387682-49387780)
chr4 (73-166)||(7744907-7744999)
chr4 (71-147)||(25063367-25063443)
chr4 (73-172)||(4751619-4751717)
chr4 (105-172)||(30563381-30563448)
chr4 (73-172)||(31078614-31078712)
chr4 (71-166)||(36073254-36073349)
chr4 (75-164)||(24392854-24392942)
chr4 (83-172)||(23964269-23964357)
chr4 (74-169)||(44744607-44744698)
chr4 (77-150)||(33530676-33530749)
chr4 (86-150)||(36073731-36073795)
chr4 (77-150)||(10442777-10442850)
chr4 (77-150)||(31078807-31078880)
chr4 (77-150)||(46441848-46441921)
chr4 (77-150)||(49387876-49387949)
chr4 (77-150)||(2624841-2624914)
chr4 (77-150)||(7745100-7745173)
chr4 (77-150)||(21802310-21802383)
chr4 (77-150)||(22199265-22199338)
chr4 (77-150)||(24392671-24392744)
chr4 (77-150)||(36072951-36073024)
chr4 (77-150)||(47290070-47290143)
chr4 (77-150)||(4751450-4751523)
chr4 (77-150)||(24128243-24128316)
chr4 (77-150)||(36073354-36073427)
chr4 (77-150)||(44893430-44893503)
chr4 (79-150)||(42671675-42671746)
chr4 (71-114)||(53998977-53999020)
chr4 (77-150)||(53123034-53123108)
chr4 (101-150)||(17655458-17655507)
chr4 (85-150)||(23964453-23964518)
chr4 (77-150)||(50156566-50156639)
[»] chr3 (44 HSPs)
chr3 (73-172)||(36864827-36864926)
chr3 (73-171)||(40328004-40328102)
chr3 (71-172)||(26612918-26613019)
chr3 (75-172)||(33145884-33145980)
chr3 (71-172)||(47738283-47738384)
chr3 (70-172)||(19650692-19650793)
chr3 (73-164)||(9796824-9796914)
chr3 (73-172)||(22426140-22426238)
chr3 (85-172)||(33839707-33839794)
chr3 (71-172)||(30385572-30385672)
chr3 (73-172)||(3137209-3137307)
chr3 (73-172)||(3456236-3456334)
chr3 (73-172)||(3574321-3574419)
chr3 (73-164)||(8361834-8361924)
chr3 (73-172)||(33113966-33114064)
chr3 (73-172)||(34482683-34482781)
chr3 (73-172)||(37216848-37216946)
chr3 (74-172)||(8320378-8320475)
chr3 (73-166)||(6042055-6042147)
chr3 (71-172)||(24343721-24343822)
chr3 (72-172)||(3089591-3089690)
chr3 (69-172)||(2754891-2754993)
chr3 (75-172)||(42921297-42921394)
chr3 (73-166)||(48161084-48161176)
chr3 (72-172)||(37522225-37522324)
chr3 (73-164)||(41224414-41224504)
chr3 (71-172)||(42298034-42298124)
chr3 (74-166)||(46919072-46919164)
chr3 (77-150)||(6041888-6041961)
chr3 (77-150)||(33113797-33113870)
chr3 (88-171)||(41883031-41883114)
chr3 (77-150)||(3137402-3137475)
chr3 (77-150)||(3574515-3574588)
chr3 (77-150)||(42297357-42297431)
chr3 (77-150)||(2754721-2754794)
chr3 (85-150)||(9797017-9797082)
chr3 (77-150)||(11347272-11347345)
chr3 (77-150)||(33145717-33145789)
chr3 (77-150)||(37217041-37217114)
chr3 (105-150)||(8362033-8362078)
chr3 (77-150)||(24343551-24343624)
chr3 (77-150)||(34482898-34482971)
chr3 (85-150)||(37522065-37522130)
chr3 (85-150)||(47738117-47738182)
[»] chr8 (57 HSPs)
chr8 (75-172)||(20091598-20091694)
chr8 (71-172)||(30055688-30055788)
chr8 (75-172)||(34665553-34665649)
chr8 (75-172)||(37132477-37132574)
chr8 (73-172)||(6108028-6108126)
chr8 (71-172)||(10044520-10044620)
chr8 (71-172)||(17841643-17841743)
chr8 (71-172)||(25581032-25581132)
chr8 (73-172)||(26041908-26042006)
chr8 (73-172)||(32064918-32065016)
chr8 (73-172)||(37985851-37985949)
chr8 (73-172)||(40779924-40780022)
chr8 (74-172)||(14129031-14129128)
chr8 (73-166)||(1503638-1503730)
chr8 (75-172)||(24211169-24211265)
chr8 (73-172)||(1645759-1645857)
chr8 (73-172)||(15187732-15187830)
chr8 (75-172)||(38017104-38017201)
chr8 (73-162)||(31347571-31347659)
chr8 (71-172)||(42754835-42754935)
chr8 (72-172)||(3596835-3596934)
chr8 (105-169)||(41819594-41819658)
chr8 (73-164)||(7022159-7022249)
chr8 (76-170)||(3890412-3890506)
chr8 (71-172)||(24844653-24844754)
chr8 (73-154)||(30834850-30834931)
chr8 (84-172)||(39772608-39772695)
chr8 (73-164)||(7017653-7017743)
chr8 (85-172)||(32394029-32394114)
chr8 (85-172)||(35353213-35353299)
chr8 (76-150)||(24844847-24844920)
chr8 (112-172)||(8454005-8454065)
chr8 (77-150)||(8453838-8453911)
chr8 (77-150)||(26042104-26042177)
chr8 (77-150)||(27782105-27782178)
chr8 (77-150)||(32064749-32064822)
chr8 (77-150)||(34665386-34665459)
chr8 (77-150)||(7017853-7017926)
chr8 (77-150)||(17841838-17841911)
chr8 (77-150)||(20091789-20091862)
chr8 (114-171)||(27835288-27835345)
chr8 (77-150)||(31347770-31347843)
chr8 (77-150)||(40780117-40780190)
chr8 (85-150)||(42755030-42755095)
chr8 (85-124)||(1886633-1886672)
chr8 (85-150)||(6108221-6108286)
chr8 (85-150)||(7021990-7022055)
chr8 (77-150)||(14128868-14128941)
chr8 (77-150)||(15187564-15187637)
chr8 (105-150)||(15972865-15972910)
chr8 (77-150)||(27835441-27835514)
chr8 (77-150)||(32393862-32393935)
chr8 (77-150)||(35353045-35353118)
chr8 (77-150)||(37986043-37986116)
chr8 (85-149)||(38016983-38017047)
chr8 (85-150)||(39772789-39772854)
chr8 (78-150)||(25581227-25581299)
[»] chr7 (37 HSPs)
chr7 (75-172)||(4974532-4974628)
chr7 (71-172)||(24395143-24395243)
chr7 (73-172)||(15329446-15329544)
chr7 (73-172)||(35445569-35445667)
chr7 (73-172)||(45637883-45637981)
chr7 (73-171)||(15577642-15577739)
chr7 (82-172)||(29737316-29737406)
chr7 (75-171)||(20009895-20009991)
chr7 (73-172)||(3962150-3962248)
chr7 (73-172)||(34483010-34483108)
chr7 (73-172)||(48880722-48880820)
chr7 (71-172)||(30848741-30848841)
chr7 (73-172)||(42611983-42612081)
chr7 (73-172)||(42696255-42696354)
chr7 (74-164)||(37476876-37476965)
chr7 (73-158)||(25167651-25167735)
chr7 (71-172)||(35876416-35876516)
chr7 (73-164)||(15238564-15238654)
chr7 (73-164)||(18037157-18037247)
chr7 (71-138)||(36790269-36790336)
chr7 (77-150)||(15329277-15329350)
chr7 (77-150)||(48880915-48880988)
chr7 (77-150)||(4974723-4974796)
chr7 (77-150)||(34482839-34482912)
chr7 (77-150)||(42611815-42611888)
chr7 (77-150)||(45637716-45637789)
chr7 (72-142)||(40880640-40880708)
chr7 (77-147)||(15577841-15577911)
chr7 (77-150)||(3961983-3962056)
chr7 (77-150)||(20010086-20010158)
chr7 (77-150)||(25167838-25167911)
chr7 (77-150)||(29737143-29737216)
chr7 (77-150)||(35444562-35444635)
chr7 (77-139)||(37477079-37477141)
chr7 (77-150)||(15238386-15238459)
chr7 (85-150)||(18036990-18037055)
chr7 (77-150)||(36790454-36790527)
[»] chr5 (36 HSPs)
chr5 (72-172)||(8145545-8145644)
chr5 (71-172)||(33584122-33584222)
chr5 (73-172)||(4892374-4892472)
chr5 (73-172)||(12614532-12614631)
chr5 (73-164)||(22912852-22912942)
chr5 (71-172)||(6043305-6043405)
chr5 (71-172)||(38899518-38899619)
chr5 (73-172)||(3521802-3521900)
chr5 (73-172)||(14138839-14138937)
chr5 (73-172)||(25398410-25398508)
chr5 (73-172)||(37321588-37321686)
chr5 (74-172)||(3362951-3363048)
chr5 (76-172)||(12850974-12851069)
chr5 (72-172)||(2477808-2477907)
chr5 (73-164)||(17545477-17545567)
chr5 (77-150)||(12614721-12614794)
chr5 (94-172)||(11360947-11361024)
chr5 (77-150)||(22913042-22913115)
chr5 (111-166)||(13664737-13664792)
chr5 (90-171)||(27481995-27482077)
chr5 (77-150)||(2477640-2477713)
chr5 (77-150)||(4433995-4434068)
chr5 (77-150)||(6043499-6043572)
chr5 (85-150)||(8145387-8145452)
chr5 (77-150)||(11361119-11361192)
chr5 (116-172)||(4433845-4433901)
chr5 (77-150)||(3362782-3362855)
chr5 (77-150)||(4892206-4892279)
chr5 (77-150)||(25398242-25398315)
chr5 (77-150)||(38899714-38899787)
chr5 (85-140)||(10458409-10458464)
chr5 (114-172)||(36880148-36880211)
chr5 (77-150)||(17545673-17545746)
chr5 (105-150)||(31640928-31640973)
chr5 (77-150)||(33584317-33584390)
chr5 (75-103)||(12614483-12614511)
[»] chr1 (41 HSPs)
chr1 (72-172)||(37821628-37821727)
chr1 (71-172)||(25973579-25973679)
chr1 (71-164)||(32000059-32000151)
chr1 (74-166)||(40215166-40215257)
chr1 (73-172)||(18404620-18404718)
chr1 (73-172)||(20304925-20305023)
chr1 (73-164)||(33786426-33786516)
chr1 (73-172)||(44094869-44094967)
chr1 (73-172)||(51737677-51737775)
chr1 (73-172)||(3559789-3559887)
chr1 (73-172)||(19015576-19015674)
chr1 (73-172)||(25463848-25463946)
chr1 (73-172)||(36966503-36966601)
chr1 (73-172)||(41876237-41876335)
chr1 (75-164)||(40273888-40273976)
chr1 (73-172)||(6883659-6883757)
chr1 (72-172)||(9910085-9910184)
chr1 (75-171)||(44690818-44690914)
chr1 (72-150)||(19722893-19722970)
chr1 (74-146)||(52064373-52064445)
chr1 (76-150)||(33786623-33786696)
chr1 (77-150)||(40273706-40273779)
chr1 (73-172)||(27523050-27523149)
chr1 (73-166)||(10167577-10167670)
chr1 (77-150)||(16045786-16045859)
chr1 (77-150)||(32000255-32000328)
chr1 (77-150)||(40214992-40215065)
chr1 (77-150)||(6883491-6883564)
chr1 (77-150)||(25463680-25463753)
chr1 (77-150)||(44094702-44094775)
chr1 (85-150)||(44691017-44691082)
chr1 (77-150)||(9910281-9910354)
chr1 (77-150)||(19015408-19015481)
chr1 (71-172)||(22157331-22157431)
chr1 (77-122)||(34519762-34519807)
chr1 (77-150)||(36966696-36966769)
chr1 (77-150)||(37821822-37821895)
chr1 (111-172)||(52329447-52329508)
chr1 (87-150)||(27523243-27523306)
chr1 (77-150)||(3559621-3559694)
chr1 (77-150)||(18404446-18404519)
[»] scaffold0228 (5 HSPs)
scaffold0228 (73-172)||(26108-26206)
scaffold0228 (73-172)||(16156-16254)
scaffold0228 (85-150)||(8414-8479)
scaffold0228 (85-150)||(15996-16061)
scaffold0228 (85-150)||(25948-26013)
[»] scaffold0085 (2 HSPs)
scaffold0085 (71-172)||(48021-48121)
scaffold0085 (77-150)||(47854-47927)
[»] scaffold0471 (2 HSPs)
scaffold0471 (75-172)||(13014-13110)
scaffold0471 (77-150)||(12846-12919)
[»] scaffold0204 (2 HSPs)
scaffold0204 (71-172)||(4568-4668)
scaffold0204 (77-150)||(4400-4473)
[»] scaffold0178 (2 HSPs)
scaffold0178 (72-172)||(11793-11892)
scaffold0178 (77-150)||(11625-11698)
[»] scaffold0096 (2 HSPs)
scaffold0096 (72-172)||(41182-41281)
scaffold0096 (77-150)||(41015-41088)
[»] scaffold0041 (1 HSPs)
scaffold0041 (72-142)||(85575-85643)
[»] scaffold0665 (1 HSPs)
scaffold0665 (77-150)||(3072-3145)


Alignment Details
Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 28675418 - 28675320
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28675418 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctttc 28675320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 17705264 - 17705361
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17705264 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcac-cttagatttcagtctcatttattaacctttc 17705361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 2309216 - 2309316
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  2309216 atggaaaatgctagatatcaacgatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 2309314  T
Q  171 tc 172  Q
    ||    
T  2309315 tc 2309316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 17175816 - 17175914
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||| |||||    
T  17175816 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttc 17175914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 32702475 - 32702377
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  32702475 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttc 32702377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 33696967 - 33696869
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  33696967 ggaaaatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 33696869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 18365368 - 18365467
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||  |||||||||||||||||||||||| ||||    
T  18365368 tggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 18365466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 18370632 - 18370731
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||  |||||||||||||||||||||||| ||||    
T  18370632 tggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 18370730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 29693716 - 29693617
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||| || ||||||||||||||| |||||||| ||||||    
T  29693716 ggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctttc 29693617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 33695118 - 33695219
Alignment:
Q  70 gatggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacct 169  Q
    |||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||| ||||||||||||  |||||||||||||||||||||||| ||    
T  33695118 gatggaaaatgctagatatcaagaatgattttat-aagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatct 33695216  T
Q  170 ttc 172  Q
    |||    
T  33695217 ttc 33695219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 11548386 - 11548474
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  11548386 aaaatgctagatatcaagaatgattt-atcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 11548474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 23290876 - 23290974
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||| ||  |||||||||||||||||||||||| |||||    
T  23290876 ggaaaatgctagatatcaaaaatgattttat-aagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatctttc 23290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 6031537 - 6031632
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    ||||| || |||||||||||||||||||| || ||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  6031537 aaaatactggatatcaagaatgattttataaa-aaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 6031632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcac 140  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaag-aagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 18889470 - 18889537
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||| ||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  18889470 aagaatgattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 18889537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 6127506 - 6127449
Alignment:
Q  115 caagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  6127506 caagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttc 6127449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 25986934 - 25987007
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||| || |||||||||||||| ||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcactcttaaattt 25987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 582520 - 582602
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacat-gacacaataatcactcttagatttca 152  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| || | || |||||||||  ||||||||||    
T  582520 atggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 17176082 - 17176009
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  |||||||||||||||||| ||||||||| |||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 17705526 - 17705453
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| ||||||||| |||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 33695388 - 33695315
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 33696700 - 33696773
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 127
Target Start/End: Original strand, 2121002 - 2121058
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatg 127  Q
    |||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||    
T  2121002 atggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatg 2121058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 6127279 - 6127352
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 23291145 - 23291072
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 28675152 - 28675225
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| |  ||||||||| |||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 8515556 - 8515620
Alignment:
Q  108 aaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||| || |||||||||  | ||||||||||||||||||||||||| |||||||||| ||||    
T  8515556 aaagatttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttc 8515620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 140
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcac 140  Q
    ||||||| |||||||||| |||||||| |||| ||||| |||||||||||| || |||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 150
Target Start/End: Complemental strand, 11548647 - 11548576
Alignment:
Q  79 tgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||| ||||||||||  ||||| | |||||| |||||||||||||||| || ||||||||| |||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 18365634 - 18365561
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  ||||||||||||||| || ||||||||| |||| ||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 18370898 - 18370825
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  ||||||||||||||| || ||||||||| |||| ||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 6031802 - 6031729
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| ||||| || || |||  || ||||||||||||||| ||||||||| |||| ||||    
T  6031802 aatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatcacccttaaattt 6031729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 172
Target Start/End: Original strand, 9752110 - 9752139
Alignment:
Q  143 ttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||    
T  9752110 ttagatttcagtctcatttattaacctttc 9752139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 18889757 - 18889685
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| ||||| || ||||||  ||||||||||||||| || |||||| || |||||||||    
T  18889757 aatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 9293368 - 9293468
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  9293368 atggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctt 9293466  T
Q  171 tc 172  Q
    ||    
T  9293467 tc 9293468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 22592983 - 22592882
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttaga--tttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||||||||||    
T  22592983 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaacctt 22592884  T
Q  171 tc 172  Q
    ||    
T  22592883 tc 22592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 10662160 - 10662060
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||    
T  10662160 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctt 10662062  T
Q  171 tc 172  Q
    ||    
T  10662061 tc 10662060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 13355118 - 13355020
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  13355118 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttc 13355020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 33380479 - 33380379
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  33380479 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 33380381  T
Q  171 tc 172  Q
    ||    
T  33380380 tc 33380379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 35161030 - 35160931
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  35161030 tggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 35160932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 7475301 - 7475401
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| |||||||||  |||||||||||||||||||||||| |||    
T  7475301 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatctt 7475399  T
Q  171 tc 172  Q
    ||    
T  7475400 tc 7475401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 172
Target Start/End: Complemental strand, 3989342 - 3989248
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  3989342 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttc 3989248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 16767288 - 16767355
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 16767355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 23267857 - 23267955
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  23267857 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 23267955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 31174633 - 31174728
Alignment:
Q  76 aaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |  |||||||||| ||||||||||||| |||||    
T  31174633 aaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttc 31174728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 43331182 - 43331092
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||  |||||||||||  ||||||||||||||||||||||    
T  43331182 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatt 43331092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 21393483 - 21393570
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  21393483 aaaatgctagatatcaagaatgattt-atcaagaaa-attcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt 21393570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 9723679 - 9723586
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||| ||||||||||||||||||| || |||||| ||| ||||||||||||||| |||||||||  |||||||||||||| |||||||    
T  9723679 atggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttatt 9723586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 14941427 - 14941354
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  94 atgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||| |||||||||| || |||||||||||||| ||||||| |||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 9723409 - 9723482
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||| ||||| ||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 34320991 - 34321042
Alignment:
Q  113 ttcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  34320991 ttcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 14941199 - 14941257
Alignment:
Q  114 tcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||  ||||||||||| ||| |||||||||||||||    
T  14941199 tcaagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttc 14941257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 9293637 - 9293564
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 31174887 - 31174822
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||||||||||  ||||||||||||||| || ||||||||| |||||||||    
T  31174887 atatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 21936321 - 21936254
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||| ||| ||||||||||||| ||||||||||||  |||||||||||| ||||||||||| |||||    
T  21936321 aagaatgatccaagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttc 21936254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 7475569 - 7475496
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||| | ||||||||| |||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 10661891 - 10661964
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 21936085 - 21936158
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| ||| || ||||||||| |||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 23268123 - 23268050
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 35160761 - 35160834
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 43330916 - 43330989
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | || ||| |||||||||||||||| || ||||||||| |||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 37335741 - 37335789
Alignment:
Q  101 tattaagaaagattcaagaatgacatgacacaataatcactcttagatt 149  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||    
T  37335741 tattaagaaagattcaagaatgacatggcagaataatcacttttagatt 37335789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 40262531 - 40262629
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||  ||| | | ||  |||||||||||||||||  | |||||| |||||||||||||||| | |||| ||||| ||||    
T  40262531 ggaaaatgctagatatcaagaatggattt-tcacgatggattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacgtttc 40262629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 27847831 - 27847791
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagat 113  Q
    ||||||||||||||||||||||| ||||||| |||||||||    
T  27847831 ggaaaatgctagatatcaagaataattttatcaagaaagat 27847791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 39819319 - 39819272
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaaga 119  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||||||    
T  39819319 atggaaaatgttagatatcaagaatgatttta-taagaaaaattcaaga 39819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| ||||||  ||||||||||| ||| || |||||| || |||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 16767119 - 16767148
Alignment:
Q  1 aaattccaatgttgaaaaccttacagatca 30  Q
    ||||||||||||||||||||||||||||||    
T  16767119 aaattccaatgttgaaaaccttacagatca 16767148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 16767256 - 16767285
Alignment:
Q  1 aaattccaatgttgaaaaccttacagatca 30  Q
    ||||||||||||||||||||||||||||||    
T  16767256 aaattccaatgttgaaaaccttacagatca 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 21393749 - 21393676
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||| | |||||| ||| ||||||||||||  | ||||||||| |||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatc 138  Q
    |||||||||| ||||||||||| ||| |||||||||||| ||| || |||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 33380211 - 33380284
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  || |||||||||||| |  ||||||||| |||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

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Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 21802115 - 21802213
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  21802115 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttc 21802213  T

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Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 42671939 - 42671840
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T

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Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 11314046 - 11314144
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||    
T  11314046 ggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaaccttt 11314144  T

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Target: chr4; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 36073621 - 36073521
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  36073621 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 36073523  T
Q  171 tc 172  Q
    ||    
T  36073522 tc 36073521  T

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Target: chr4; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 10442582 - 10442672
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||    
T  10442582 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatt 10442672  T

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Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 22199529 - 22199431
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  22199529 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 22199431  T

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Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 46442114 - 46442016
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  46442114 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 46442016  T

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Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 17655699 - 17655602
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||| ||  ||||||||||||||||||||||||||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttc 17655602  T

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Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 44893698 - 44893598
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  44893698 atggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 44893600  T
Q  171 tc 172  Q
    ||    
T  44893599 tc 44893598  T

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Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 37934736 - 37934835
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| ||||||| | || ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  37934736 ggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaacctttc 37934835  T

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Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 44893008 - 44893106
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  44893008 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 44893106  T

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Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 50156374 - 50156471
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  50156374 ggaaaatgttagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatcac-cttagatttcagtctcatttattaatctttc 50156471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 53123301 - 53123203
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||   |||||||||||||||||||||||| |||||    
T  53123301 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttc 53123203  T

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Target: chr4; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 9089138 - 9089042
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||   |||||||||||||||||||||||| |||||    
T  9089138 aaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttc 9089042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 24128507 - 24128411
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  24128507 aaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttc 24128411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 47290336 - 47290245
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatta 165  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||  |||||||||||||||||||||||    
T  47290336 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatta 47290245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 2625107 - 2625009
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||  ||||||||||||  |||||||||||||||||||||||| |||||    
T  2625107 ggaaaatgttagatatcaagaatgattttat-aagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 2625009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 33530479 - 33530577
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaa-aaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 33530577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 36073221 - 36073123
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| |||||||| |||  |||||||||||||||||||||||| |||||    
T  36073221 ggaaaatgctagatatcaaaaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 36073123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 37219902 - 37219803
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| |||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||  ||||||||||| ||| |||||||||||||||    
T  37219902 ggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacctttc 37219803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 49387682 - 49387780
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| ||||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  49387682 ggaaaatgttagatatcaaggatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 49387780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 7744907 - 7744999
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||  |||||||||| |||||||||||||    
T  7744907 ggaaaatgttagatatcaagaatgattttat-aagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaa 7744999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 71 - 147
Target Start/End: Original strand, 25063367 - 25063443
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttaga 147  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||||||||||||||    
T  25063367 atggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcactcttaga 25063443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 4751717 - 4751619
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| |||||||||||| |||||||| |||  |||||||||||||||||||||||| |||||    
T  4751717 ggaaaatgctagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 4751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 30563448 - 30563381
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttc 30563381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 31078614 - 31078712
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||   |||||||||| ||||||||||||| |||||    
T  31078614 ggaaaatgctagatatcaagaatgattttataaaaaaa-attcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatctttc 31078712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 36073254 - 36073349
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    |||||||||||||||||  || ||||||||||| |||||||||| |||||||| ||| || |||||| |||||||||||||||||| |||||||||    
T  36073254 atggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 24392942 - 24392854
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||| || |||||| ||| |||||||||||  |||||||||||  |||||||||||||||||||||||    
T  24392942 aaaatgctagatatcaagaatgattt-atcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt 24392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 23964269 - 23964357
Alignment:
Q  83 agatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||   |||||||||| ||||||||||||| |||||    
T  23964269 agatatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttc 23964357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 44744698 - 44744607
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacct 169  Q
    ||||||| |||||||||| |||||||||||     ||||||||||||||||||||| ||||||| |  ||||||||||||||| ||||||||||||    
T  44744698 gaaaatgttagatatcaaaaatgattttat----caagattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacct 44744607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 33530749 - 33530676
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| |||||| |||||||||||||||| || ||||||||| |||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  86 tatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||| |||||||| |||||||||| ||||||||||||||| |||||||||| ||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 10442850 - 10442777
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 31078880 - 31078807
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 46441848 - 46441921
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| ||||||||  ||||||||||||||| || ||||||||| |||||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 49387949 - 49387876
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 2624841 - 2624914
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| ||| || ||||||||| |||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 7745173 - 7745100
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 21802383 - 21802310
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 22199265 - 22199338
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||  |||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 24392671 - 24392744
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | |||||| |||||||||||||||| || ||||||||| |||| ||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 36072951 - 36073024
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||| ||| |||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 47290070 - 47290143
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 4751450 - 4751523
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || ||||| ||| |||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 24128243 - 24128316
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||  |||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 36073354 - 36073427
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||| ||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 44893430 - 44893503
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | || |||  ||||||||||||||| || ||||||||| |||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 150
Target Start/End: Original strand, 42671675 - 42671746
Alignment:
Q  79 tgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||| ||||||| || |||||||| || ||| ||| |||||||||||| || ||||||||| |||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Original strand, 53998977 - 53999020
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagatt 114  Q
    |||||||||  |||||||||||||||||||||| ||||||||||    
T  53998977 atggaaaatattagatatcaagaatgattttatcaagaaagatt 53999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 53123034 - 53123108
Alignment:
Q  77 aatgctagatatcaagaatgattttattaa-gaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | || ||||  ||||||||||||||| || ||||||||| |||||||||    
T  53123034 aatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 17655458 - 17655507
Alignment:
Q  101 tattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||||  ||||||||||||||| || ||||||||| |||||||||    
T  17655458 tattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| || |||  || |||||||||||| || ||||||||| |||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 50156639 - 50156566
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||| ||||| |||||| | ||||||  || |||||||||||| || ||||||||| |||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 5e-40; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 36864827 - 36864926
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  36864827 ggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacatttc 36864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 40328102 - 40328004
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||    
T  40328102 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttaccttt 40328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 26613019 - 26612918
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  26613019 atggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctt 26612920  T
Q  171 tc 172  Q
    ||    
T  26612919 tc 26612918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 33145980 - 33145884
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  33145980 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttc 33145884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 47738384 - 47738283
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  47738384 atggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctt 47738285  T
Q  171 tc 172  Q
    ||    
T  47738284 tc 47738283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 70 - 172
Target Start/End: Original strand, 19650692 - 19650793
Alignment:
Q  70 gatggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacct 169  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  19650692 gatggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatct 19650790  T
Q  170 ttc 172  Q
    |||    
T  19650791 ttc 19650793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 9796824 - 9796914
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9796824 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt 9796914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 22426140 - 22426238
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  22426140 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttc 22426238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 33839794 - 33839707
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttc 33839707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 30385672 - 30385572
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  30385672 atggaaaatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 30385574  T
Q  171 tc 172  Q
    ||    
T  30385573 tc 30385572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 3137209 - 3137307
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  3137209 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3137307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 3456334 - 3456236
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||| |||||    
T  3456334 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatctttc 3456236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 3574321 - 3574419
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||| |||||    
T  3574321 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttc 3574419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 8361834 - 8361924
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8361834 ggaaaatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttatt 8361924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 33114064 - 33113966
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||    
T  33114064 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 33113966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 34482683 - 34482781
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  34482683 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 34482781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 37216848 - 37216946
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||  |||||||||||||||||||||||| |||||    
T  37216848 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttc 37216946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 8320378 - 8320475
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  8320378 gaaaatgctagatatcaataatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 8320475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 6042147 - 6042055
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  6042147 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 6042055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 24343822 - 24343721
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||| |  |||||||| ||||||||||||||| |||||||||||||    
T  24343822 atggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctt 24343723  T
Q  171 tc 172  Q
    ||    
T  24343722 tc 24343721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 3089690 - 3089591
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  3089690 tggaaaatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 3089592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 2754993 - 2754891
Alignment:
Q  69 agatggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacc 168  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||||||||  ||| |||||||||||||||||||| |    
T  2754993 agatggaaaatgctagatatcaagaatcattttat-aagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatc 2754895  T
Q  169 tttc 172  Q
    ||||    
T  2754894 tttc 2754891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 42921394 - 42921297
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||| |||||||||||||| |||||| ||| |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||    
T  42921394 aaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacctttc 42921297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 48161176 - 48161084
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    ||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  48161176 ggaaaatgctagatatcaagaatgattttat-aagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaa 48161084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 37522324 - 37522225
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| || |||||||||  |||||||||||||||||||||||| ||||    
T  37522324 tggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatcttt 37522226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 41224504 - 41224414
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||| |||| |||||| |||||||||||    
T  41224504 ggaaaatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttatt 41224414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 42298124 - 42298034
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||| |||||||||||||||||||           |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  42298124 atggaaaatgctaaatatcaagaatgattttat-----------caagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctt 42298036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 46919164 - 46919072
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    ||||||| |||||||||||||||||||||| || |||||||||| ||||||||| || |||||||||   |||||||| |||| |||||||||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaa 46919072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 6041888 - 6041961
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 33113797 - 33113870
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||| ||||| || ||||||||| |||||||||    
T  33113797 aatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatcacccttagattt 33113870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 88 - 171
Target Start/End: Original strand, 41883031 - 41883114
Alignment:
Q  88 tcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||| ||||||||||| |||||||||||||||||||||||  | ||||||||   || ||||||||||| |||||| |||||||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttt 41883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 3137475 - 3137402
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 3574588 - 3574515
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 42297357 - 42297431
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgac-acaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||||| | ||||||||| |||||||||    
T  42297357 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatcacccttagattt 42297431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 2754721 - 2754794
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || |||||||||  ||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||| | |||||| |||||||||||||||| || |||||||||  ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 11347272 - 11347345
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || |||||| || |||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 33145717 - 33145789
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| ||||||||||| |||  || |||||||||||| || ||||||||| |||||||||    
T  33145717 aatgctatatatcaagaaagattttattaaaaaatttt-aagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 37217114 - 37217041
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||| ||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||| |||||||||||||||| || ||||||||| |||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 24343551 - 24343624
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||| ||||| |||||||| |||||| |||||| | | | ||| || |||||||||||||||||||    
T  24343551 aatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatcactcttagattt 24343624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 34482971 - 34482898
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||  | ||||||||| |||||||||    
T  34482971 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 37522065 - 37522130
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||| | ||||||  || ||||||||||||||| ||||||||| || ||||||    
T  37522065 atatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatcaccctaagattt 37522130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 47738117 - 47738182
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| |||||| |||||||||||| ||| || |||||| ||  ||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattt 47738182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 7e-39; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 20091598 - 20091694
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  20091598 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 20091694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 30055788 - 30055688
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  30055788 atggaaaatgctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctt 30055690  T
Q  171 tc 172  Q
    ||    
T  30055689 tc 30055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 34665649 - 34665553
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  34665649 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 34665553  T

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Target: chr8; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 37132477 - 37132574
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  37132477 aaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttc 37132574  T

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Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 6108028 - 6108126
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  6108028 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 6108126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 10044620 - 10044520
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||| |||    
T  10044620 atggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctt 10044522  T
Q  171 tc 172  Q
    ||    
T  10044521 tc 10044520  T

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Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 17841643 - 17841743
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  17841643 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 17841741  T
Q  171 tc 172  Q
    ||    
T  17841742 tc 17841743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 25581032 - 25581132
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||| |||    
T  25581032 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctt 25581130  T
Q  171 tc 172  Q
    ||    
T  25581131 tc 25581132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 26041908 - 26042006
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  26041908 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 26042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 32065016 - 32064918
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  32065016 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 32064918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 37985851 - 37985949
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||||||| |||||    
T  37985851 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttc 37985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 40779924 - 40780022
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  40779924 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 40780022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 14129128 - 14129031
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  14129128 gaaaatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 14129031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 1503638 - 1503730
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  1503638 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 1503730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 24211169 - 24211265
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  24211169 aaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 24211265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 1645759 - 1645857
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  1645759 ggaaaatgctagatatcaagaatgattttat-aagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 1645857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 15187830 - 15187732
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||||||||  |||||||||||||||||||||||| |||||    
T  15187830 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 15187732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 38017201 - 38017104
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataa-tcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||| |||||    
T  38017201 aaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttc 38017104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 31347571 - 31347659
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcattta 162  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  31347571 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcattta 31347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 42754835 - 42754935
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||  |||||||||||  |||||||||||||||||||||||| |||    
T  42754835 atggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctt 42754933  T
Q  171 tc 172  Q
    ||    
T  42754934 tc 42754935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 3596835 - 3596934
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  3596835 tggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatcttt 3596933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 41819594 - 41819658
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacct 169  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacct 41819658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 7022249 - 7022159
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    ||||||||||||||||||| |||||||| || ||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||    
T  7022249 ggaaaatgctagatatcaacaatgattt-atcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt 7022159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 170
Target Start/End: Original strand, 3890412 - 3890506
Alignment:
Q  76 aaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| || |||||||||  |||||||| | ||| |||||||||||||    
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaacctt 3890506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 24844653 - 24844754
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||| |||||||||| ||||||||||| |||||||||| ||||||| |||| || ||||||||||||||||||| | ||| | |||||||||||    
T  24844653 atggaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctt 24844752  T
Q  171 tc 172  Q
    ||    
T  24844753 tc 24844754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 30834850 - 30834931
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagt 154  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||| ||| |||||||||||||    
T  30834850 ggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagt 30834931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 39772608 - 39772695
Alignment:
Q  84 gatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||| || |||||||| |||||    
T  39772608 gatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttc 39772695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 7017653 - 7017743
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || |||||| ||| |||||||||||   | ||||||||  |||||||||||||||||||||||    
T  7017653 ggaaaatgctagatatcaagaatgattt-atcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt 7017743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 32394114 - 32394029
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||| || ||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  32394114 atatcaagaatgattttataaa-aaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttc 32394029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 35353299 - 35353213
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  ||| |||| | ||||||||||||| |||||    
T  35353299 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttc 35353213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 24844920 - 24844847
Alignment:
Q  76 aaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||| ||||||||||  |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 8454065 - 8454005
Alignment:
Q  112 attcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  8454065 attcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 8454005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 8453838 - 8453911
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 26042177 - 26042104
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||| ||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 27782178 - 27782105
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||||| ||||||||||||| ||||||||| || ||||||||| |||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 32064749 - 32064822
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 34665386 - 34665459
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 7017926 - 7017853
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||| ||| |||||| |||||||| |||||||||||||||| || ||||||||  |||||||||    
T  7017926 aatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 17841911 - 17841838
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 20091862 - 20091789
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 27835288 - 27835345
Alignment:
Q  114 tcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||| ||||| |||||||||||||||  ||||||||||| ||||||||||||||||||    
T  27835288 tcaaaaatgatatgacacaataatcatccttagatttcaatctcatttattaaccttt 27835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 31347843 - 31347770
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||| | |||||| |||||||||||||||| || ||||||||| |||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 40780190 - 40780117
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 1886672 - 1886633
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgac 124  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgac 1886633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||| ||||||||  || |||||||||||| || ||||||||| |||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||| | |||||| |||||||||||| ||| || ||||||||| |||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 14128868 - 14128941
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  || |||||||||||| || ||||||||| |||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 15187564 - 15187637
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| ||| || |||||| || |||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 15972910 - 15972865
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||||    
T  15972910 aagaaagattgaagaatgacatgacagaataatcacccttagattt 15972865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 27835514 - 27835441
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||| || ||| ||||||||||| ||||||||||||||||  | ||||||||  |||||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattt 27835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 32393862 - 32393935
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||| ||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 35353045 - 35353118
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  || |||||||||||| || ||||||||| |||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 37986116 - 37986043
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  || |||||||||||| || ||||||||| |||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 149
Target Start/End: Original strand, 38016983 - 38017047
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatt 149  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| ||| ||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttggatt 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 39772854 - 39772789
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||||  ||||||| || |||  ||||||||||||||| || ||||||||| |||||||||    
T  39772854 atatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 25581299 - 25581227
Alignment:
Q  78 atgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||| |||||||||| | |||||  ||||||  ||||||||||||||| || |||||||||  ||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 172
Target Start/End: Original strand, 4974532 - 4974628
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  4974532 aaaatgctagatatcaagaatgattttataaa-aaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 4974628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 24395243 - 24395143
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  24395243 atggaaaatgctagatatcaagaatgattttataaa-aaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 24395145  T
Q  171 tc 172  Q
    ||    
T  24395144 tc 24395143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 15329544 - 15329446
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  15329544 ggaaaatgctagatataaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttc 15329446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 35445667 - 35445569
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||    
T  35445667 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttc 35445569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 45637981 - 45637883
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  45637981 ggaaaatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 45637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 73 - 171
Target Start/End: Original strand, 15577642 - 15577739
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  15577642 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatcttt 15577739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 172
Target Start/End: Complemental strand, 29737406 - 29737316
Alignment:
Q  82 tagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttc 29737316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 20009895 - 20009991
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaaccttt 20009991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 3962248 - 3962150
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| || ||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  3962248 ggaaaatgctagatatcaagaatgattttat-aagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3962150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 34483108 - 34483010
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||    
T  34483108 ggaaaatgttagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 34483010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 48880722 - 48880820
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||| ||||||||||| |||||    
T  48880722 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttc 48880820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 30848841 - 30848741
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||| ||||||||||||  ||| |||||||||||||||||||| |||    
T  30848841 atggaaaatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctt 30848743  T
Q  171 tc 172  Q
    ||    
T  30848742 tc 30848741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 42612081 - 42611983
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||    
T  42612081 ggaaaatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 42611983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 42696354 - 42696255
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| |||||||||| ||||||||||| || ||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||    
T  42696354 ggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaacttttc 42696255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 37476876 - 37476965
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    ||||||||||||||||||||||||||| || |||||||||| || ||||||||| |||||||||||| |||||||||||||||||||||||    
T  37476876 gaaaatgctagatatcaagaatgattt-atcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttatt 37476965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 158
Target Start/End: Original strand, 25167651 - 25167735
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctca 158  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  ||||||||||||||||    
T  25167651 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca 25167735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 35876516 - 35876416
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| ||  || ||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  35876516 atggaaaatgctagatatcaagaatgattttat-aagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 35876418  T
Q  171 tc 172  Q
    ||    
T  35876417 tc 35876416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 15238654 - 15238564
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || || ||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  15238654 ggaaaatgctagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 15238564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 18037247 - 18037157
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    ||||||||||||||||||| |||||||| || |||||||||| ||||||||||||  ||||||||||| |||||||||||||| ||||||||    
T  18037247 ggaaaatgctagatatcaacaatgattt-atcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt 18037157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 138
Target Start/End: Original strand, 36790269 - 36790336
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatc 138  Q
    ||||||||||||| ||||||| |||| |||||| || |||||||||||||||||||||||||||||||    
T  36790269 atggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc 36790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 15329277 - 15329350
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 48880988 - 48880915
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 4974796 - 4974723
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 34482839 - 34482912
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||||||| || ||||||||| |||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 42611815 - 42611888
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 45637716 - 45637789
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 40880640 - 40880708
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactc 142  Q
    ||||||||||||||||||||||||||||| |||  |||||||| || ||| ||||| ||||||||||||||    
T  40880640 tggaaaatgctagatatcaagaatgatttgatt--gaaagattaaaaaataacatggcacaataatcactc 40880708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 15577911 - 15577841
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttaga 147  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| ||||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 3961983 - 3962056
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| ||||||||| |||| ||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 20010158 - 20010086
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  |||||||||||||| ||| ||||||||| |||||||||    
T  20010158 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat-acagaataatcacccttagattt 20010086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 25167911 - 25167838
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| ||||||||  || |||||||||||| || ||||||||  |||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 29737143 - 29737216
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| ||||||||  || ||||||||||||  | ||||||||| |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 35444562 - 35444635
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||| ||||| |||||| | ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 37477141 - 37477079
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatca 139  Q
    ||||||| |||||||||| |||||| | |||||| ||| |||||||||||| || ||||||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatca 37477079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 15238386 - 15238459
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  | ||| | |||||| |||||||||||||||| || |||||||||  ||||||||    
T  15238386 aatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||| | |||||| ||| |||||||||||| || ||||||||| |||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 36790527 - 36790454
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| | |||||| |||||| ||| |||||||||||| || |||||| || |||| ||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 7e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 8145644 - 8145545
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  8145644 tggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 8145546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 33584122 - 33584222
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  33584122 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 33584220  T
Q  171 tc 172  Q
    ||    
T  33584221 tc 33584222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 4892472 - 4892374
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  4892472 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 4892374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 12614532 - 12614631
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||| |||||||||| || ||||||| |||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  12614532 ggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaacctttc 12614631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 22912852 - 22912942
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  22912852 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 22912942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 6043305 - 6043405
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||    
T  6043305 atggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctt 6043403  T
Q  171 tc 172  Q
    ||    
T  6043404 tc 6043405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 38899518 - 38899619
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||| |||  |||||||||||||||||||||||| |||    
T  38899518 atggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctt 38899617  T
Q  171 tc 172  Q
    ||    
T  38899618 tc 38899619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 3521802 - 3521900
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  3521802 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3521900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 14138937 - 14138839
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||||||| |||||    
T  14138937 ggaaaatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 14138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 25398508 - 25398410
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  25398508 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 25398410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 37321588 - 37321686
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  37321588 ggaaaatgctagatatcaagaatgattttat-aagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttc 37321686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 3363048 - 3362951
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||    
T  3363048 gaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttc 3362951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 172
Target Start/End: Complemental strand, 12851069 - 12850974
Alignment:
Q  76 aaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||  |||||||||||||||||||||||| |||||    
T  12851069 aaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 12850974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 2477907 - 2477808
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| |||||||||  |||||||||||| |||||| |||||  |||||||||||||| ||||||||| ||||    
T  2477907 tggaaaatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatcttt 2477809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 17545477 - 17545567
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || || ||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17545477 ggaaaatgctagatatcaagaatgattt-atcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt 17545567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 12614794 - 12614721
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 11360947 - 11361024
Alignment:
Q  94 atgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||   |||||||||| ||| ||||||||| |||||    
T  11360947 atgattttat-aagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttc 11361024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 22913115 - 22913042
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | |||||| |||||||||||||||| || ||||||||| |||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 13664792 - 13664737
Alignment:
Q  111 gattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||    
T  13664792 gattcaagaatgacatgatagaataatcacccttagatttcagtcttatttattaa 13664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 171
Target Start/End: Complemental strand, 27482077 - 27481995
Alignment:
Q  90 aagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttaga-tttcagtctcatttattaaccttt 171  Q
    |||||||||||||| || ||||||||||||||||||| ||| |||||||||  ||||| ||| | ||| ||||||||||||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttt 27481995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 2477640 - 2477713
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 4434068 - 4433995
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| ||||||||  ||||||||||| ||| || ||||||||| |||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 6043572 - 6043499
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||  | ||||||||| |||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 11361192 - 11361119
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 4433845 - 4433901
Alignment:
Q  116 aagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||||||| ||||||||||||  |||||||||||||| ||||||||| |||||    
T  4433845 aagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 4433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 3362782 - 3362855
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || ||||| ||| |||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 4892206 - 4892279
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  || |||||||||||| || ||||||||| |||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 25398242 - 25398315
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  || |||||||||||| || ||||||||| |||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 38899787 - 38899714
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  | ||||||||||||| || ||||| ||| |||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 10458409 - 10458464
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcac 140  Q
    ||||||||||  ||||||| |||||| |||||||||||||||| || |||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcac 10458464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 36880148 - 36880211
Alignment:
Q  114 tcaagaatgacatgacaca----ataatcactcttaga-tttcagtctcatttattaacctttc 172  Q
    |||||||||||||||||||    |||||||| |||||| |||||||||||| ||||||||||||    
T  36880148 tcaagaatgacatgacacaatatataatcacccttagattttcagtctcatctattaacctttc 36880211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 17545746 - 17545673
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  | ||| | |||||| |||||||||||||||| || |||||||||  ||||||||    
T  17545746 aatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  105 aagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||||||||||||||||| || ||||| ||| |||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 33584390 - 33584317
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  || |||||||||||| || ||||||||| |||| ||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 103
Target Start/End: Complemental strand, 12614511 - 12614483
Alignment:
Q  75 aaaatgctagatatcaagaatgattttat 103  Q
    |||||||||||||||||||||||||||||    
T  12614511 aaaatgctagatatcaagaatgattttat 12614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 7e-36; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 37821628 - 37821727
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  37821628 tggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatcttt 37821726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 25973679 - 25973579
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||||||| |||    
T  25973679 atggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctt 25973581  T
Q  171 tc 172  Q
    ||    
T  25973580 tc 25973579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 32000059 - 32000151
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  32000059 atggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 32000151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 40215257 - 40215166
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  40215257 gaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 40215166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 18404718 - 18404620
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  18404718 ggaaaatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatctttc 18404620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 20304925 - 20305023
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| || |||||    
T  20304925 ggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatctttc 20305023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 33786426 - 33786516
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  33786426 ggaaaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 33786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 44094967 - 44094869
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  44094967 ggaaaatgctagatatcaagaattattttat-aagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 44094869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 51737775 - 51737677
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  51737775 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 51737677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 3559887 - 3559789
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||  ||| |||||||||||||||||||| |||||    
T  3559887 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttc 3559789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 19015674 - 19015576
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  19015674 ggaaaatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 19015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 25463946 - 25463848
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||  |||||||| ||||||||||||||| |||||    
T  25463946 ggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttc 25463848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 36966503 - 36966601
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  36966503 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatctttc 36966601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 41876237 - 41876335
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||  ||||||||||||  |||||||||||||||||||||||| |||||    
T  41876237 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 41876335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 40273976 - 40273888
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttatt 164  Q
    |||||||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40273976 aaaatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 40273888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 6883757 - 6883659
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| || |||| ||||  |||||||||||||||||||||||| |||||    
T  6883757 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttc 6883659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 9910085 - 9910184
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  ||||||||||| || ||||||||| ||||    
T  9910085 tggaaaatgttagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatcttt 9910183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 44690818 - 44690914
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||| |||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||| |||||||| |||||| ||||||||| ||||    
T  44690818 aaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatcttt 44690914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 72 - 150
Target Start/End: Original strand, 19722893 - 19722970
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  19722893 tggaaaatgttagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  74 gaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttag 146  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| |||| |||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 33786696 - 33786623
Alignment:
Q  76 aaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| |||| ||||    
T  33786696 aaatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||||||||||| |||||| | |||||| |||||||||||||||| || ||||||||| |||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 27523050 - 27523149
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||||   ||| || | ||||||| ||| ||||| ||||| |||||||||| ||||    
T  27523050 ggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttttc 27523149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 73 - 166
Target Start/End: Complemental strand, 10167670 - 10167577
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaa 166  Q
    |||||||| || |||| |||||||||||||| || ||| ||| |||||| | |||| |||||||||||  |||||||||||||| |||||||||    
T  10167670 ggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaa 10167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 16045859 - 16045786
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 32000328 - 32000255
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | |||||| ||||||||||||||||||| ||||| ||| |||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 40214992 - 40215065
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 6883491 - 6883564
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||| ||||| |||||| ||||||||  ||||||||||||||| || ||||||||| |||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 25463680 - 25463753
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || |||||||||||| || ||||||||| |||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 44094702 - 44094775
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| ||||||||||  ||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 44691082 - 44691017
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| || |||||||||||||| ||||| || |||||| ||||||||||||    
T  44691082 atatcaagaaagattttataaaaaaagattcaagaattacatggcagaataataactcttagattt 44691017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 9910354 - 9910281
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||  |||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 19015408 - 19015481
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| ||| || ||||||||| |||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 22157331 - 22157431
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||| ||||| ||  ||| ||  |||| ||||||||||||  | ||||||||| |||| |||||| ||| |||||||||| ||    
T  22157331 atggaaaatgctagatatcaaaaatgaattc-ttatgatggatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaacatt 22157429  T
Q  171 tc 172  Q
    ||    
T  22157430 tc 22157431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 34519762 - 34519807
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatg 122  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||    
T  34519762 aatgctatatatcaagaaagattttattaagaaagattcaaaaatg 34519807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 36966769 - 36966696
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| ||| || ||||||||| |||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 37821895 - 37821822
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| ||| || ||||||||| |||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 52329508 - 52329447
Alignment:
Q  111 gattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||  || ||||||||| ||||||||||||||| | |||||||| ||||    
T  52329508 gattcaagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttc 52329447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 150
Target Start/End: Complemental strand, 27523306 - 27523243
Alignment:
Q  87 atcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||||  ||||||| |||||| ||| ||||||||||||||| ||||||||| |||| ||||    
T  27523306 atcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatcacccttaaattt 27523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 3559621 - 3559694
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  || |||||||||||| || ||||||||| |||| ||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 18404446 - 18404519
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||  | |||||||||  ||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 72; Significance: 7e-33; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 26206 - 26108
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||  |||||||||||||||||||||||| |||||    
T  26206 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 26108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 16254 - 16156
Alignment:
Q  73 ggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||   |||||||||||||||||||||||| |||||    
T  16254 ggaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttc 16156  T

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Target: scaffold0228; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

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Target: scaffold0228; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

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Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  85 atatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

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Target: scaffold0085 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 48121 - 48021
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||   |||||||||||||||||||||||| |||    
T  48121 atggaaaatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctt 48023  T
Q  171 tc 172  Q
    ||    
T  48022 tc 48021  T

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Target: scaffold0085; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 47854 - 47927
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    |||||||  ||||||||| |||||||| ||||||  ||||||||||||||| || ||||||||| |||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

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Target: scaffold0471 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 75 - 172
Target Start/End: Complemental strand, 13110 - 13014
Alignment:
Q  75 aaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttc 172  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||  |||||||||||||||||||||||| |||||    
T  13110 aaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttc 13014  T

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Target: scaffold0471; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 12846 - 12919
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || ||||||||  |||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

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Target: scaffold0204 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 4668 - 4568
Alignment:
Q  71 atggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctt 170  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||| ||||||||||||  |||||||||||||||||||||||| |||    
T  4668 atggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctt 4570  T
Q  171 tc 172  Q
    ||    
T  4569 tc 4568  T

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Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 4400 - 4473
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||| | ||||||  || |||||||||||| || ||||||||| |||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

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Target: scaffold0178 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 11892 - 11793
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    ||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||    
T  11892 tggaaaatgttagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 11794  T

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Target: scaffold0178; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 11625 - 11698
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

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Target: scaffold0096 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 41281 - 41182
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaaccttt 171  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||  |||||||||||  |||||||||||||||||||||||| ||||    
T  41281 tggaaaatgctagatatcaagaatgattttat-aagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatcttt 41183  T

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Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 41015 - 41088
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  ||||||||||||||| || ||||||||| |||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

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Target: scaffold0041 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 85643 - 85575
Alignment:
Q  72 tggaaaatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactc 142  Q
    ||||||||||||||||||||||||||||| |||  |||||||| || ||| ||||| ||||||||||||||    
T  85643 tggaaaatgctagatatcaagaatgatttgatt--gaaagattaaaaaataacatggcacaataatcactc 85575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 3072 - 3145
Alignment:
Q  77 aatgctagatatcaagaatgattttattaagaaagattcaagaatgacatgacacaataatcactcttagattt 150  Q
    ||||||| |||||||||| |||||||| || |||  || |||||||||||| || ||||||||| |||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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