View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16174_low_5 (Length: 355)
Name: NF16174_low_5
Description: NF16174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16174_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 8 - 338
Target Start/End: Original strand, 45074765 - 45075095
Alignment:
| Q |
8 |
tgaaatgaattaacacagcgaggaaactaacaaagagagtgaagagcagattcatacttagaattttgagtctaccccataaatctagtttctctgattg |
107 |
Q |
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| T |
45074765 |
tgaaatgaattagcacagcgaggaaactaacaaagagagtgaagagcagattcatacttagaattttgagtctaccccataaatctagtttctctgattg |
45074864 |
T |
|
| Q |
108 |
agttaaagtgttgggctgaccctttccttgaattagcctctcaagaaggtgagaaagatccaagtcttgtgctatccggcagcttaagttgtgcatagaa |
207 |
Q |
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| T |
45074865 |
agttaaagtgttgggctgaccctttccttgaattagcctctcaagaaggtgagaaagatccaagtcttgtgctattcggcagcttaagttgtgcatagaa |
45074964 |
T |
|
| Q |
208 |
tgaggtaatgtaattgtatcagaaattctctgaatattctcaaagtgagcttgcatcctatcatagtgaattgacgaaaacaaagacatgccatcaacat |
307 |
Q |
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| T |
45074965 |
tgaggtaatgtaattgtatcagaaattctctgaatattctcaaagtgagcttgcatcctatcatagtgaattgacaaaaacaaagacatgccatcaacat |
45075064 |
T |
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| Q |
308 |
ttgttgcttttagattaatggtaccagaaaa |
338 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
45075065 |
ttgttgcttttagattaatggtaccagaaaa |
45075095 |
T |
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