View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16176_high_11 (Length: 394)

Name: NF16176_high_11
Description: NF16176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16176_high_11
NF16176_high_11
[»] chr5 (15 HSPs)
chr5 (1-319)||(29199140-29199458)
chr5 (1-116)||(34264536-34264651)
chr5 (1-116)||(36440388-36440503)
chr5 (1-98)||(16860491-16860588)
chr5 (1-116)||(32288265-32288380)
chr5 (1-116)||(24040273-24040390)
chr5 (1-98)||(37424450-37424547)
chr5 (1-116)||(9989470-9989585)
chr5 (1-116)||(35569968-35570083)
chr5 (1-98)||(16860608-16860705)
chr5 (1-116)||(2183090-2183205)
chr5 (1-116)||(27186020-27186135)
chr5 (21-98)||(25567196-25567273)
chr5 (1-116)||(11316105-11316216)
chr5 (11-116)||(38958922-38959027)
[»] chr4 (38 HSPs)
chr4 (162-319)||(12652447-12652603)
chr4 (1-116)||(33091641-33091756)
chr4 (1-110)||(23755988-23756097)
chr4 (1-116)||(50768968-50769083)
chr4 (1-116)||(44991466-44991581)
chr4 (1-116)||(44957536-44957651)
chr4 (1-91)||(6505724-6505814)
chr4 (1-117)||(37206615-37206731)
chr4 (1-117)||(43566566-43566682)
chr4 (1-116)||(1433459-1433574)
chr4 (1-116)||(8592116-8592231)
chr4 (1-116)||(19088529-19088644)
chr4 (1-116)||(21763369-21763484)
chr4 (1-116)||(30683716-30683831)
chr4 (1-116)||(38339639-38339754)
chr4 (1-116)||(53995122-53995237)
chr4 (1-110)||(14985484-14985593)
chr4 (1-98)||(23755606-23755703)
chr4 (1-110)||(50508645-50508754)
chr4 (1-117)||(53751090-53751206)
chr4 (1-116)||(623867-623982)
chr4 (1-116)||(15477833-15477948)
chr4 (1-116)||(42855527-42855642)
chr4 (1-116)||(46849857-46849972)
chr4 (1-116)||(52557275-52557390)
chr4 (1-110)||(6712116-6712225)
chr4 (1-110)||(41878047-41878156)
chr4 (4-116)||(19508604-19508716)
chr4 (1-117)||(43734474-43734590)
chr4 (1-116)||(12817953-12818068)
chr4 (1-116)||(16037982-16038097)
chr4 (1-116)||(25182000-25182115)
chr4 (1-116)||(24898336-24898451)
chr4 (1-116)||(39448676-39448791)
chr4 (1-116)||(41752004-41752119)
chr4 (1-116)||(53259326-53259441)
chr4 (1-90)||(36122621-36122710)
chr4 (1-47)||(8398218-8398264)
[»] chr8 (25 HSPs)
chr8 (1-116)||(38588734-38588849)
chr8 (1-116)||(44594789-44594904)
chr8 (3-115)||(15871811-15871923)
chr8 (13-116)||(7949559-7949662)
chr8 (1-112)||(11707938-11708049)
chr8 (1-116)||(27473259-27473374)
chr8 (1-116)||(33295872-33295987)
chr8 (3-98)||(40048220-40048315)
chr8 (1-115)||(45276784-45276898)
chr8 (1-110)||(15048552-15048661)
chr8 (15-116)||(45077405-45077506)
chr8 (1-116)||(1432278-1432393)
chr8 (1-116)||(5152722-5152837)
chr8 (1-116)||(5435088-5435203)
chr8 (1-98)||(37569502-37569600)
chr8 (1-116)||(7535021-7535136)
chr8 (1-96)||(24659384-24659479)
chr8 (11-110)||(27669569-27669668)
chr8 (37-111)||(11173858-11173932)
chr8 (9-91)||(34470716-34470798)
chr8 (1-97)||(1870099-1870197)
chr8 (3-116)||(1651762-1651875)
chr8 (3-116)||(1740138-1740251)
chr8 (23-110)||(1646717-1646804)
chr8 (1-54)||(18298428-18298481)
[»] chr6 (24 HSPs)
chr6 (1-116)||(5938001-5938116)
chr6 (6-116)||(18053103-18053213)
chr6 (1-116)||(7270776-7270891)
chr6 (1-116)||(7270100-7270215)
chr6 (1-116)||(32993203-32993318)
chr6 (1-116)||(5310973-5311088)
chr6 (1-116)||(34994568-34994683)
chr6 (1-109)||(3423358-3423466)
chr6 (1-116)||(5639361-5639476)
chr6 (1-116)||(6236109-6236224)
chr6 (1-116)||(9046233-9046348)
chr6 (1-116)||(34890791-34890906)
chr6 (1-116)||(35167678-35167795)
chr6 (12-116)||(24744475-24744579)
chr6 (1-91)||(26957134-26957224)
chr6 (1-98)||(21856743-21856840)
chr6 (1-116)||(2517149-2517264)
chr6 (1-116)||(25176845-25176960)
chr6 (10-116)||(26600504-26600610)
chr6 (10-110)||(21540174-21540274)
chr6 (1-116)||(31237893-31238008)
chr6 (1-116)||(31247263-31247378)
chr6 (1-67)||(32753369-32753435)
chr6 (3-116)||(6137568-6137681)
[»] chr3 (36 HSPs)
chr3 (1-116)||(8474034-8474149)
chr3 (1-110)||(27801642-27801751)
chr3 (1-116)||(51509307-51509422)
chr3 (1-116)||(54752310-54752425)
chr3 (1-98)||(11256268-11256365)
chr3 (1-116)||(10506136-10506251)
chr3 (1-116)||(22151992-22152107)
chr3 (1-116)||(26318370-26318485)
chr3 (1-116)||(29818324-29818439)
chr3 (1-116)||(39241505-39241620)
chr3 (1-116)||(39951504-39951619)
chr3 (1-116)||(42591931-42592046)
chr3 (2-116)||(54108091-54108205)
chr3 (1-110)||(39664372-39664481)
chr3 (1-98)||(53716458-53716555)
chr3 (1-116)||(12203739-12203854)
chr3 (1-117)||(24428713-24428829)
chr3 (1-116)||(22201763-22201878)
chr3 (1-116)||(47669406-47669521)
chr3 (1-98)||(46152778-46152875)
chr3 (1-116)||(5900611-5900726)
chr3 (1-116)||(15986382-15986496)
chr3 (1-116)||(16931753-16931868)
chr3 (1-116)||(21969776-21969891)
chr3 (1-116)||(21992212-21992327)
chr3 (1-116)||(32633253-32633368)
chr3 (5-91)||(18464628-18464714)
chr3 (1-98)||(41835114-41835211)
chr3 (1-96)||(19883406-19883502)
chr3 (1-116)||(1994357-1994471)
chr3 (1-116)||(21568893-21569007)
chr3 (1-116)||(44893887-44894002)
chr3 (1-110)||(47303207-47303315)
chr3 (1-116)||(4757682-4757796)
chr3 (3-110)||(4773395-4773502)
chr3 (1-48)||(28986348-28986395)
[»] scaffold0221 (1 HSPs)
scaffold0221 (3-116)||(8575-8688)
[»] chr7 (26 HSPs)
chr7 (1-110)||(44332707-44332816)
chr7 (1-116)||(6356912-6357027)
chr7 (1-116)||(21391378-21391493)
chr7 (1-108)||(31638131-31638238)
chr7 (1-116)||(33716735-33716850)
chr7 (1-117)||(48626251-48626367)
chr7 (1-116)||(17359328-17359443)
chr7 (1-116)||(41751797-41751912)
chr7 (1-116)||(41453193-41453308)
chr7 (1-110)||(7579060-7579169)
chr7 (1-110)||(43247568-43247677)
chr7 (1-116)||(28297966-28298081)
chr7 (1-117)||(36423515-36423631)
chr7 (1-116)||(10526458-10526572)
chr7 (1-110)||(34037099-34037208)
chr7 (1-98)||(35146886-35146983)
chr7 (1-116)||(8542646-8542761)
chr7 (1-116)||(19681683-19681798)
chr7 (1-116)||(28286305-28286420)
chr7 (1-60)||(17363437-17363496)
chr7 (3-116)||(6356432-6356545)
chr7 (1-116)||(40673195-40673308)
chr7 (1-116)||(41191870-41191988)
chr7 (1-116)||(8937037-8937152)
chr7 (1-65)||(17750123-17750187)
chr7 (1-51)||(1114257-1114307)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-116)||(50668-50779)
[»] chr1 (29 HSPs)
chr1 (1-116)||(9006379-9006494)
chr1 (1-116)||(27400612-27400727)
chr1 (1-116)||(37284916-37285031)
chr1 (1-116)||(45052877-45052992)
chr1 (1-117)||(20306148-20306264)
chr1 (1-117)||(25995930-25996046)
chr1 (1-109)||(27547857-27547965)
chr1 (1-108)||(26707384-26707491)
chr1 (1-116)||(49140331-49140446)
chr1 (1-107)||(44322816-44322922)
chr1 (4-116)||(31703761-31703873)
chr1 (1-116)||(3089489-3089604)
chr1 (1-116)||(12127241-12127356)
chr1 (1-116)||(12481247-12481362)
chr1 (1-116)||(23476529-23476644)
chr1 (1-116)||(37304175-37304290)
chr1 (1-116)||(1762862-1762977)
chr1 (1-116)||(2064399-2064514)
chr1 (1-116)||(16024044-16024159)
chr1 (1-116)||(49643859-49643974)
chr1 (1-98)||(4697070-4697167)
chr1 (1-116)||(6797995-6798110)
chr1 (1-116)||(37576328-37576443)
chr1 (1-112)||(37585881-37585992)
chr1 (2-116)||(38127856-38127970)
chr1 (1-98)||(35612270-35612367)
chr1 (1-115)||(8762587-8762701)
chr1 (19-116)||(4330043-4330140)
chr1 (1-116)||(39486390-39486496)
[»] scaffold0072 (1 HSPs)
scaffold0072 (5-116)||(15595-15706)
[»] chr2 (21 HSPs)
chr2 (1-116)||(26181888-26182003)
chr2 (1-116)||(34735531-34735646)
chr2 (1-110)||(2148074-2148183)
chr2 (1-116)||(8174073-8174188)
chr2 (1-116)||(41474229-41474344)
chr2 (1-116)||(36713735-36713847)
chr2 (1-116)||(13193135-13193250)
chr2 (1-116)||(15744604-15744719)
chr2 (1-116)||(16305172-16305287)
chr2 (17-116)||(24138710-24138809)
chr2 (1-116)||(29472389-29472504)
chr2 (1-110)||(19815892-19816001)
chr2 (1-117)||(24372155-24372271)
chr2 (1-116)||(7469313-7469428)
chr2 (1-116)||(15405944-15406059)
chr2 (21-116)||(38332851-38332946)
chr2 (1-116)||(10991998-10992113)
chr2 (1-116)||(19847507-19847621)
chr2 (1-116)||(17052205-17052316)
chr2 (1-116)||(7496168-7496282)
chr2 (23-116)||(12860577-12860670)
[»] scaffold0003 (2 HSPs)
scaffold0003 (10-110)||(113519-113619)
scaffold0003 (1-110)||(349226-349335)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1-116)||(18420-18535)
[»] scaffold0182 (1 HSPs)
scaffold0182 (1-116)||(19855-19970)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-116)||(82046-82161)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-116)||(20898-21012)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-116)||(24309-24424)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-116)||(14323-14438)
[»] scaffold0037 (1 HSPs)
scaffold0037 (9-116)||(45903-46010)
[»] scaffold0115 (1 HSPs)
scaffold0115 (3-116)||(21658-21771)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-116)||(72909-73023)
[»] scaffold0246 (1 HSPs)
scaffold0246 (17-116)||(6145-6241)


Alignment Details
Target: chr5 (Bit Score: 303; Significance: 1e-170; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 319
Target Start/End: Original strand, 29199140 - 29199458
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29199140 atatgaatcataacagttatcaataacatcagtcactatttaatcataataccttaacaaagcatagaattaaaatgatactaataaataatgttagaag 29199239  T
Q  101 atccacataatacaaataattctaacgtgaaacgactgttatttagagacggtgggactattttgatataattttgtgacgaaagaaagttgatgtattt 200  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199240 atccacataatataaataattctaacgtgaaacgactgttatttagagacggtgggactattttgatataattttgtgacgaaagaaagttgatgtattt 29199339  T
Q  201 cattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaaggacgattaacaaactatcttctccttccatccttccataac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199340 cattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaaggacgattaacaaactatcttctccttccatccttccataac 29199439  T
Q  301 tgaaaatcaaatcccgctt 319  Q
    |||||||||||||||||||    
T  29199440 tgaaaatcaaatcccgctt 29199458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34264536 - 34264651
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||| |||||| |    
T  34264536 atatgaaccataacagttaccaataatatcagtcactatttaatcataatatcttaacaaggcatagaaccaaaatgatattaataaataaagttagagg 34264635  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  34264636 acccacataacacaaa 34264651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 36440388 - 36440503
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  36440388 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaatgaatatgaccaaaatgatactaataaataaagttagagg 36440487  T
Q  101 atccacataatacaaa 116  Q
    | ||| |||| |||||    
T  36440488 acccatataacacaaa 36440503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16860491 - 16860588
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||| |||| |||||||||||||||||||| ||||||    
T  16860491 atatgaaccataacagttaccaataatatcagtcactatttaatcataatatcttaacaagacatggaaccaaaatgatactaataaataaagttaga 16860588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32288265 - 32288380
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| |||||  || ||||| |||||||||||||| |||||| |    
T  32288265 atatgaaccataacagttaccaataatatcaatcactatttaatcataatactttaacaaggcatatgaccaaaataatactaataaataaagttagagg 32288364  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  32288365 acccacataacacaaa 32288380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 24040273 - 24040390
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaa--atgatactaataaataatgttaga 98  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||  ||||||||||||||||| ||||||    
T  24040273 atatgaacaataatagttaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatatgatactaataaataaagttaga 24040372  T
Q  99 agatccacataatacaaa 116  Q
    ||| |||||||| |||||    
T  24040373 agacccacataacacaaa 24040390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37424450 - 37424547
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||  |||| || ||||||||| |||||||||| ||||||    
T  37424450 atatgaaccataacagttaccaataatatcagtcactatttaatcataatatcttaacaaaaaataggaccaaaatgatattaataaataaagttaga 37424547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9989585 - 9989470
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| ||||||||| ||||||| ||||||||||||||||||| ||  ||||| || |||||||||||||||||||| |||||| |    
T  9989585 atatgaaccataacaattaccaataatattagtcactgtttaatcataataccttaataagacataggaccaaaatgatactaataaataaagttagagg 9989486  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  9989485 acccacataacacaaa 9989470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 35569968 - 35570083
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| | |||  ||  ||||||||||||||||||| |||||| |    
T  35569968 atatgaaccataacagttaccaataatatcagtcactatttaatcataataacttaacaaggaataagaccgaaatgatactaataaataaagttagagg 35570067  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  35570068 actcacataacacaaa 35570083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16860608 - 16860705
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||  ||||  || |||||||||||||||||||| ||||||    
T  16860608 atatgaaccataacagttaccaataatatcagtcactaattaatcataatacattaacaagacataagaccaaaatgatactaataaataaagttaga 16860705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2183205 - 2183090
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||   |||  || |||||||||||||||||||| |||||| |    
T  2183205 atataaaccataacagttaccaataatattagtcactatttaatcataatactttaacaagatatatgaccaaaatgatactaataaataaagttagagg 2183106  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  2183105 acccacataacacaaa 2183090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 27186135 - 27186020
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||||| |||||  || |||||||||||||| |||||  ||||| |    
T  27186135 atatgaaccataacaattaccaataataccattcactatttaatcataataccttaacaaggcataagaccaaaatgatactaattaataaaattagagg 27186036  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  27186035 acccacataaaacaaa 27186020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 98
Target Start/End: Original strand, 25567196 - 25567273
Alignment:
Q  21 caataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||  |||||||| |||||||||||||| ||||||    
T  25567196 caataatattagtcactatttaatcataatactttaacaaggcatatgactaaaataatactaataaataaagttaga 25567273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 11316216 - 11316105
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||   |||| |   ||||| || |||||||||||||||||||| |||||| |    
T  11316216 atatgaaccataacagttaccaataatataagtcaatatttaatcataat-tgttaaga---cataggaccaaaatgatactaataaataaagttagagg 11316121  T
Q  101 atccacataatacaaa 116  Q
    | | |||||| |||||    
T  11316120 acctacataacacaaa 11316105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 38958922 - 38959027
Alignment:
Q  11 taacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||| ||| ||||||||||||||||||||||||||||||| |||||| |   |||  || ||||||||||| |||||||| |||||| ||  |||||||    
T  38958922 taacaattaccaataatatcagtcactatttaatcataatatcttaacgagatataagaccaaaatgatacttataaataaagttagaggactcacataa 38959021  T
Q  111 tacaaa 116  Q
     |||||    
T  38959022 cacaaa 38959027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 8e-77; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 162 - 319
Target Start/End: Complemental strand, 12652603 - 12652447
Alignment:
Q  162 tttgatataattttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaagga 261  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652603 tttgatataattt-gtgacaaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaagga 12652505  T
Q  262 cgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgctt 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652504 cgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgctt 12652447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33091641 - 33091756
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |    
T  33091641 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaagcataggaccaaaatgatactaataaataaagttagagg 33091740  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  33091741 acccacataacacaaa 33091756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23755988 - 23756097
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  || |||||||||||||||||||| |||||| |    
T  23755988 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaaacatatgaccaaaatgatactaataaataaagttagagg 23756087  T
Q  101 atccacataa 110  Q
    ||||||||||    
T  23756088 atccacataa 23756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 50769083 - 50768968
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  50769083 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaataaagttagagg 50768984  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  50768983 atccacataacacaaa 50768968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44991466 - 44991581
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  44991466 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaataaagttagagg 44991565  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  44991566 acccacataacacaaa 44991581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44957651 - 44957536
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |||||  || |||||||||||||||||||| |||||| |    
T  44957651 atatgaaccataacagttaccaataatatcagtcactatttaatcataatacattatcaaggcatatgaccaaaatgatactaataaataaagttagagg 44957552  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  44957551 atccacataacacaaa 44957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 6505724 - 6505814
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataa 91  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  6505724 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataa 6505814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37206615 - 37206731
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||| |||  || |||||||||||||||||||| |||||| |    
T  37206615 atatgaaccataaaagttaccaataatatcagccactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaataaagttagagg 37206714  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  37206715 acccacataacacaaat 37206731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43566566 - 43566682
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||| || |    
T  43566566 atatgaaccataacagttaccaataatatcaatcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaataaagtttgagg 43566665  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  43566666 acccacataacacaaat 43566682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1433459 - 1433574
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||| |||||  || |||||||||||||||||||| |||||| |    
T  1433459 atatgaaccataatagttaccaataatatcagtcactatttaatcataataccataacaaggcataagaccaaaatgatactaataaataaagttagagg 1433558  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  1433559 acccacataacacaaa 1433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8592231 - 8592116
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  8592231 atatgaaccataacagttaccaataatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 8592132  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  8592131 acccacataacacaaa 8592116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19088529 - 19088644
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  |  |||||||||||||||||||| |||||| |    
T  19088529 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaataagatcaaaatgatactaataaataaagttagagg 19088628  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  19088629 acccacataacacaaa 19088644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21763369 - 21763484
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   ||| ||  |||||||||||||||||||| |||||| |    
T  21763369 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagaaataaaaacaaaatgatactaataaataaagttagagg 21763468  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  21763469 acccacataacacaaa 21763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30683716 - 30683831
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  30683716 atatgaaccataacagttgccaataatataagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 30683815  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  30683816 acccacataacacaaa 30683831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38339754 - 38339639
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  38339754 atatgaaccataacagttaccaataatatgtgtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 38339655  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  38339654 acccacataacacaaa 38339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 53995122 - 53995237
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||| || ||||||||| |||||||||| |||||| |    
T  53995122 atatgaaccatatcagttaccaataatatcagtcactatttaatcataataccttaacaaggaataggaccaaaatgatattaataaataaagttagagg 53995221  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  53995222 acccacataacacaaa 53995237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14985593 - 14985484
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||| |||||| |    
T  14985593 atatgagccataagagttaccaataatatcagtcactatttaatcataatactttaacaaggcataggaccaaaatgatactaataaataaagttagagg 14985494  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  14985493 acccacataa 14985484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23755606 - 23755703
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||  || |||||||||||||||||||| ||||||    
T  23755606 atatgaaccataacaattaccaataatatcagtcactatttaatcataatacattaacaaagcatatgaccaaaatgatactaataaataaagttaga 23755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50508645 - 50508754
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  || ||||| |||||||||||||| |||||| |    
T  50508645 atatgaaccataacagttaccaataatattagtcactatttaatcataataccttaacaaggcatatgaccaaaataatactaataaataaagttagagg 50508744  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  50508745 acccacataa 50508754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 53751090 - 53751206
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  || ||||| |||||||||||||| |||||| |    
T  53751090 atatgaatcataacagttaccaataatataagtcactatttaatcataataccttaacaaggcataagaccaaaattatactaataaataaagttagagg 53751189  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  53751190 acccacataacacaaat 53751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 623867 - 623982
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| | |||  || |||||||| ||||||||||| |||||| |    
T  623867 atatgaaccataacagttaccaataatatctgtcactatttaatcataatatcttaacaaggaataagaccaaaatgatgctaataaataaagttagagg 623966  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  623967 atccacataacacaaa 623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15477833 - 15477948
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  || ||||||||||||||||| || |||||| |    
T  15477833 atatgaaccataacagttaccaataatatgagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaacaaagttagagg 15477932  T
Q  101 atccacataatacaaa 116  Q
    | |||| ||| |||||    
T  15477933 acccacgtaacacaaa 15477948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 42855527 - 42855642
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| | | |||| || |||||||||||||||||||| |||||| |    
T  42855527 atatgaaccacaacagttaccaataatatcagtcattatttaatcataataccttaacgaggaataggaccaaaatgatactaataaataaagttagagg 42855626  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  42855627 acccacataacacaaa 42855642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 46849857 - 46849972
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| | |||  || |||||||||||||||||||| |||||| |    
T  46849857 atatgaaccataacagttaccaataatatcggtcactatttaatcataatatcttaacaaggaataagaccaaaatgatactaataaataaagttagagg 46849956  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  46849957 acccacataacacaaa 46849972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 52557275 - 52557390
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||  |||||| ||| ||||||||||||| ||||||||||||||||||||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  52557275 atatgaattataacaattaccaataatatcagttactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaataaagttagagg 52557374  T
Q  101 atccacataatacaaa 116  Q
    ||||||||||||||||    
T  52557375 atccacataatacaaa 52557390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6712225 - 6712116
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| || ||| || || |||||||||||||||||||| |||||| |    
T  6712225 atatgaaccataacatttaccaataatatcagtcactatttaatcataatatcttaataaggcacaggaccaaaatgatactaataaataaagttagagg 6712126  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  6712125 acccacataa 6712116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41878047 - 41878156
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  |||  || |||||||||||||||||||| ||| || |    
T  41878047 atatgaaccataacagttaccaataatatcagtcaatatttaatcataataccttaacaaataatatgaccaaaatgatactaataaataaagttggagg 41878146  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  41878147 acccacataa 41878156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 19508604 - 19508716
Alignment:
Q  4 tgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatc 103  Q
    ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||| |||||  || ||||| |||||||||||||| |||||| || |    
T  19508604 tgaaccataacagttactaataatatcagtcactgtttaatcataataccttaacaaggcatatgaccaaaatcatactaataaataaagttagaggacc 19508703  T
Q  104 cacataatacaaa 116  Q
    ||||||| |||||    
T  19508704 cacataacacaaa 19508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 43734474 - 43734590
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||||||||  ||||||| |||||  || |||||||||||||||||||| |||||| |    
T  43734474 atataaaccataacagttacaaataatatcagtcactatttaatcataatattttaacaaggcataagaccaaaatgatactaataaataaagttagagg 43734573  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  43734574 acccacataacacaaat 43734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 12818068 - 12817953
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| |||||  || ||||||||||| |||||||| |||| | |    
T  12818068 atatgaaccataacatttaacaataatatccgtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactgataaataaagttacagg 12817969  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  12817968 acccacataacacaaa 12817953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 16037982 - 16038097
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  16037982 atatgaaccataacaattaccaataatatccgtcactacttaatcataataccttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 16038081  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  16038082 acccacataacacaaa 16038097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25182000 - 25182115
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| | |||| || ||||||||  |||||||||| |||||| |    
T  25182000 atatgaaccataacagttaccaataatatccgtcactatttaatcataatatcttaacaaggaataggaccaaaatgatgttaataaataaagttagagg 25182099  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  25182100 acccacataacacaaa 25182115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24898451 - 24898336
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||  |||   || |||||||||||||||||||| |||||| |    
T  24898451 atatgaaccataacagttaccaataatattagtcactatttaatcataatacattaacaagacatgtgaccaaaatgatactaataaataaagttagagg 24898352  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  24898351 acgcacataacacaaa 24898336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39448676 - 39448791
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||| |||||  || |||||||| ||||||||||| |||||| |    
T  39448676 atatgaaccataagagttaccaataatatttgtcactatttaatcataataccttaacaaggcataagaccaaaatgatgctaataaataaagttagagg 39448775  T
Q  101 atccacataatacaaa 116  Q
    | ||| |||| |||||    
T  39448776 acccagataacacaaa 39448791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41752004 - 41752119
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||  |  ||||||||| ||||||||||  ||||| |    
T  41752004 atatgaatcataacagttaccaataatatcagtcactatttaatcataataccttagcaaggcatatgatcaaaatgatattaataaataaaattagagg 41752103  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  41752104 acccacataacacaaa 41752119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 53259326 - 53259441
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| | ||| ||||||||||| ||| | |||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  53259326 atatgaaccataataattaccaataatatcactcattgtttaatcataataccttaacaaggcataagaccaaaatgatactaataaataaagttagagg 53259425  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  53259426 actcacataacacaaa 53259441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 36122621 - 36122710
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaata 90  Q
    |||||||||||| ||| || ||||||||||| |||||||||| ||||||||||||||||| |||||  || |||||||||||||||||||    
T  36122621 atatgaaccatatcagctaccaataatatcaatcactatttagtcataataccttaacaaggcatatgaccaaaatgatactaataaata 36122710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8398218 - 8398264
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcat 47  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||    
T  8398218 atataaaccataatagttatcaataatatcagtcactatttagtcat 8398264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 8e-40; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38588849 - 38588734
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||| |    
T  38588849 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttagagg 38588750  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  38588749 acccacataacacaaa 38588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 44594789 - 44594904
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||||||| |||||| |    
T  44594789 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagacatagaaccaaaataatactaataaataaagttagagg 44594888  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  44594889 atccacataacacaaa 44594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 15871811 - 15871923
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||| |||||| ||     
T  15871811 atgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaataaagttagaggac 15871910  T
Q  103 ccacataatacaa 115  Q
    |||||||| ||||    
T  15871911 ccacataacacaa 15871923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 7949662 - 7949559
Alignment:
Q  13 acagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataata 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |    
T  7949662 acagttatcaataatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataaca 7949563  T
Q  113 caaa 116  Q
    ||||    
T  7949562 caaa 7949559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11707938 - 11708049
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||  |  |||||||||||||||||||| |||||| |    
T  11707938 atatgaaccataacagttaccaataatatcagtcattatttaatcataataccttaacaaaacataagatcaaaatgatactaataaataaagttagatg 11708037  T
Q  101 atccacataata 112  Q
    | ||||||||||    
T  11708038 acccacataata 11708049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27473259 - 27473374
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  27473259 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaataagaccaaaatgatactaataaataaagttagagg 27473358  T
Q  101 atccacataatacaaa 116  Q
    | | |||||| |||||    
T  27473359 acctacataacacaaa 27473374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 33295872 - 33295987
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||  |  |||||||||||||||||||| |||||| |    
T  33295872 atatgaatcataacagttatcaataatatcagtcactatttaatcataataccttaacaaggaatatgatcaaaatgatactaataaataaagttagagg 33295971  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  33295972 actcacataacacaaa 33295987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 40048315 - 40048220
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| ||||||    
T  40048315 atgaaccataacggttatcaataatatcagtcactatttaatcataataccttaacaatgaatatgaccaaaatgatactaataaataaagttaga 40048220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 45276784 - 45276898
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| | |||  || |||||||||||||||||||| |||||| |    
T  45276784 atatgaaccataatagttaccaataatatcagtcactatttaatcataatactttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 45276883  T
Q  101 atccacataatacaa 115  Q
    | |||||||| ||||    
T  45276884 acccacataacacaa 45276898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15048661 - 15048552
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||  |||  || |||||||||||||||||||| |||||| |    
T  15048661 atatgaaccataacagttaccaataatatcaatcattatttaatcataataccttaacaaataatatgaccaaaatgatactaataaataaagttagagg 15048562  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  15048561 acccacataa 15048552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 45077405 - 45077506
Alignment:
Q  15 agttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataataca 114  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||    
T  45077405 agttaccaataatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacaca 45077504  T
Q  115 aa 116  Q
    ||    
T  45077505 aa 45077506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1432393 - 1432278
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||  |  ||||||||| |||||||||| |||||| |    
T  1432393 atatgaaccataacagttaccaataatatcagtcactatttaaacataatacattaacaaggcatatgatcaaaatgatattaataaataaagttagagg 1432294  T
Q  101 atccacataatacaaa 116  Q
    | ||| |||| |||||    
T  1432293 acccaaataacacaaa 1432278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5152722 - 5152837
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| || |||||  || |||||||||||| ||||||| |||||| |    
T  5152722 atatgaaccataacagttaccaataatatttgtcactatttaatcataataccttaagaaggcatatgaccaaaatgatactagtaaataaagttagagg 5152821  T
Q  101 atccacataatacaaa 116  Q
    | ||| |||| |||||    
T  5152822 acccatataacacaaa 5152837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5435088 - 5435203
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||  |||| |||||||| ||||||||||||| | |||||  || |||||||||||||||||||| |||||| |    
T  5435088 atatgaaccataacagttaccaataatatttgtcattatttaattataataccttaactaggcatatgaccaaaatgatactaataaataaagttagatg 5435187  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  5435188 acccacataacacaaa 5435203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 37569502 - 37569600
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactattt-aatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||  ||||  || |||||||||||||||||||| ||||||    
T  37569502 atatgaaccataacagttaccaatcatatcagtcactattttaatcataataccttaacaagacatatgaccaaaatgatactaataaataaagttaga 37569600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7535021 - 7535136
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||||||  |||||||||||||| |||||||||||||||| ||||| | | |||  || |||||||||||||||||||| | |||| |    
T  7535021 atatgaaccataacagttacaaataatatcagtcattatttaatcataatacgttaacgaggaataagaccaaaatgatactaataaataaagctagagg 7535120  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  7535121 actcacataacacaaa 7535136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24659384 - 24659479
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgtta 96  Q
    |||| ||| ||||||||||  ||||||||||||||||||||||||| |||||||||| || ||| || || |||||||||||||||||||| ||||    
T  24659384 atattaactataacagttagtaataatatcagtcactatttaatcagaataccttaataaggcagaggaccaaaatgatactaataaataaagtta 24659479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 27669668 - 27669569
Alignment:
Q  11 taacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||||| |||||| ||||||||||||||||||||||||  ||||||| | |||  || |||||||||||||||||||| |||||| || ||||||||    
T  27669668 taacagttaccaataacatcagtcactatttaatcataataatttaacaaggtatatgaccaaaatgatactaataaataaagttagaggacccacataa 27669569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 11173858 - 11173932
Alignment:
Q  37 tatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataat 111  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||| || |||||||||    
T  11173858 tatttattcataataccttaacaaagcatagaacccaaatgatactaataaataaagttagaggacccacataat 11173932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 34470798 - 34470716
Alignment:
Q  9 cataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataa 91  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||  |  ||||||||||||||||||||    
T  34470798 cataacagttaccaataatatctgtcactatttaatcataataccttaacaaggaatatgatcaaaatgatactaataaataa 34470716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1870197 - 1870099
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatc--ataataccttaacaaagcatagaactaaaatgatactaataaataatgttag 97  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||  ||||||| |||| || |||||  || |||||||||||||||||||| |||||    
T  1870197 atatgaaccataacggttactaataatatcagtcactatttaatcatataatacattaataaggcataagaccaaaatgatactaataaataaagttag 1870099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 1651762 - 1651875
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||| ||||| | ||| ||||||||||||||||||||||||||||||| |||||| |   |||  || ||||||||||||| |||||| |||||| ||     
T  1651762 atgaaacataagaattaccaataatatcagtcactatttaatcataatatcttaacgagatatatgaccaaaatgatactaacaaataaagttagaggac 1651861  T
Q  103 ccacataatacaaa 116  Q
    |||||||| |||||    
T  1651862 ccacataacacaaa 1651875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 1740138 - 1740251
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||| ||||| | ||| ||||||||||||||||||||||||||||||| |||||| |   |||  || ||||||||||||| |||||| |||||| ||     
T  1740138 atgaaacataagaattaccaataatatcagtcactatttaatcataatatcttaacgagatatatgaccaaaatgatactaacaaataaagttagaggac 1740237  T
Q  103 ccacataatacaaa 116  Q
    |||||||| |||||    
T  1740238 ccacataacacaaa 1740251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 1646717 - 1646804
Alignment:
Q  23 ataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||||||||||||||||||||||||| |||||| |   |||  || |||||||||||||||||||| |||||| || ||||||||    
T  1646717 ataatatcagtcactatttaatcataatatcttaacgagatatatgaccaaaatgatactaataaataaagttagaggacccacataa 1646804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18298428 - 18298481
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataatacct 54  Q
    ||||||| |||||||||||  ||||||||  |||||||||||||||||||||||    
T  18298428 atatgaatcataacagttactaataatatttgtcactatttaatcataatacct 18298481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 8e-40; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5938001 - 5938116
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |    
T  5938001 atatgaaccataatagttaccaataatatcagtcactatttaatcataataccttaacaaggcatagaaccaaaatgatactaataaataaagttagagg 5938100  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  5938101 acccacataacacaaa 5938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 18053213 - 18053103
Alignment:
Q  6 aaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatcca 105  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||    
T  18053213 aaccataacaattaccaataatatcagtcactatttaatcataataccttaacaaagcatagaaccaaaatgatactaataaataaagttagaggaccca 18053114  T
Q  106 cataatacaaa 116  Q
    ||||| |||||    
T  18053113 cataacacaaa 18053103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7270891 - 7270776
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  7270891 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 7270792  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  7270791 acccacataacacaaa 7270776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7270215 - 7270100
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||  || |||||||||||||||||||| |||||| |    
T  7270215 atatgaaccataacagttatcaacaatatcagtcactatttaatcataatactttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 7270116  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  7270115 acccacataacacaaa 7270100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32993203 - 32993318
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  32993203 atatgaaccataacagttaccaataatatcagtcattatttaatcataacaccttaacaaggcataagaccaaaatgatactaataaataaagttagagg 32993302  T
Q  101 atccacataatacaaa 116  Q
    | ||||||||||||||    
T  32993303 acccacataatacaaa 32993318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 5311088 - 5310973
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  5311088 atatgaaccataatagttaccaataatatcagtcactatttaatcataataccttaacaatgaatatgaccaaaatgatactaataaataaagttagagg 5310989  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  5310988 acccacataacacaaa 5310973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34994568 - 34994683
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||| | |||||| |    
T  34994568 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataagaccaaaatgatactaataaatcaagttagagg 34994667  T
Q  101 atccacataatacaaa 116  Q
    | || ||||| |||||    
T  34994668 acccgcataacacaaa 34994683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 3423358 - 3423466
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  3423358 atatgaaccataacagttaccaataatatcggtcactatttaatcgtaataccttaacaaggcataagaccaaaatgatactaataaataaagttagagg 3423457  T
Q  101 atccacata 109  Q
    | |||||||    
T  3423458 acccacata 3423466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5639361 - 5639476
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| ||||||      
T  5639361 atatgaaccataacaattaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttagaga 5639460  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  5639461 acccacataacacaaa 5639476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6236109 - 6236224
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| |||||| || || ||||||||||||||| | |||||| |    
T  6236109 atatgaaccataacagttaccaataatatcggtcactatttaatcataatatcttaacaaggcataggaccaagatgatactaataaatgaagttagagg 6236208  T
Q  101 atccacataatacaaa 116  Q
    || ||||||| |||||    
T  6236209 attcacataacacaaa 6236224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9046348 - 9046233
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||  || ||||||||||||||||||||  ||||| |    
T  9046348 atatgaatcataacagttaccaataatatcagtcactatttaatcataatagcttaacaaggcataagaccaaaatgatactaataaataaatttagagg 9046249  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  9046248 acccacataacacaaa 9046233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 34890906 - 34890791
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||  || |||||||||||||||||||| |||||| |    
T  34890906 atatgaatcataacagttaccaataatatcagtcattatttaatcataatactttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 34890807  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  34890806 acccacataacacaaa 34890791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 35167678 - 35167795
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatc--ataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| || ||||||||||||||||||||||  ||||||||||||||| |  ||| ||||||||||||||||||||||| ||||||    
T  35167678 atatgaaccataacagttaccattaatatcagtcactatttaatcatataataccttaacaaggattaggactaaaatgatactaataaataaagttaga 35167777  T
Q  99 agatccacataatacaaa 116  Q
     || |||||||| |||||    
T  35167778 ggacccacataacacaaa 35167795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 24744579 - 24744475
Alignment:
Q  12 aacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataat 111  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||| |||||| || ||||||||     
T  24744579 aacagttaccaataatatcagtcactatttaatcataataccttaacaagaaataggaccaaaatgatactaataaataaagttagaggacccacataac 24744480  T
Q  112 acaaa 116  Q
    |||||    
T  24744479 acaaa 24744475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26957224 - 26957134
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataa 91  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||| || ||||||||||||||||||||    
T  26957224 atatgaatcataacacttaccaataatatcagtcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaataa 26957134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21856743 - 21856840
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | |||  || |||||||| ||||||||||| ||||||    
T  21856743 atatgaaccataacagttatcaataatatccgtcactgtttaatcataataccttaacaaggaataagaccaaaatgatgctaataaataaagttaga 21856840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2517264 - 2517149
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||| |||  || |||||||| || |||||||| ||| || |    
T  2517264 atatgaaccataacaattaccactaatatcagtcactatttaatcataataccttaacaaagaatatgaccaaaatgattcttataaataaagttggagg 2517165  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  2517164 acccacataacacaaa 2517149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 25176845 - 25176960
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  25176845 atatgaaccataacagttaccaataatatttgtcactatttaatcataatatcttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 25176944  T
Q  101 atccacataatacaaa 116  Q
      |||||||| |||||    
T  25176945 ccccacataacacaaa 25176960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 26600610 - 26600504
Alignment:
Q  10 ataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacata 109  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||| || | |||  || |||||||||||||||||||| |||||| || |||||||    
T  26600610 ataacagttaccaataatatcggtcactatttaatcataataccttaataaggaatatgaccaaaatgatactaataaataaagttagaggacccacata 26600511  T
Q  110 atacaaa 116  Q
    | |||||    
T  26600510 acacaaa 26600504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 21540174 - 21540274
Alignment:
Q  10 ataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacata 109  Q
    |||| |||| |||||||||||| ||||||||||||||||||| |||||||| |||||| |  |||||||||||||||||||| |||||| || |||||||    
T  21540174 ataatagttgtcaataatatcaatcactatttaatcataatatcttaacaaggcataggatcaaaatgatactaataaataaagttagaggacccacata 21540273  T
Q  110 a 110  Q
    |    
T  21540274 a 21540274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31238008 - 31237893
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| | | |  |  ||||| |||||||||||||| |||||| |    
T  31238008 atatgaaccataacagttaacaataatatctgtcattatttaatcataataccttaacaaggaacatgatcaaaataatactaataaataaagttagagg 31237909  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  31237908 acccacataaaacaaa 31237893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 31247378 - 31247263
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||| |||| |||||||||||||||||||||||| | |||  |  |||||||||||||||||||| |||||| |    
T  31247378 atatgaaccataatagttaccaataatatctgtcattatttaatcataataccttaacaaggaatatgatcaaaatgatactaataaataaagttagagg 31247279  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  31247278 actcacataaaacaaa 31247263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32753435 - 32753369
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatag 67  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  32753435 atatgaatcataacacttaccaataatatcagtcactatttaatcataataccttaacaaggcatag 32753369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 116
Target Start/End: Original strand, 6137568 - 6137681
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||| ||||||| |||  |||||||||| ||||||||||||||||||| |||||| |   |||  || |||||||||||||||||||| |||||| ||     
T  6137568 atgaaacataacaattacaaataatatcactcactatttaatcataatatcttaacgagatatatgaccaaaatgatactaataaataaagttagaggac 6137667  T
Q  103 ccacataatacaaa 116  Q
    |||||||| |||||    
T  6137668 ccacataacacaaa 6137681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 8e-40; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8474034 - 8474149
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||| |||||| |    
T  8474034 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaataaagttagagg 8474133  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  8474134 acccacataacacaaa 8474149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27801751 - 27801642
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||| |||||||||| |||||| |    
T  27801751 atatgaaccataacaattatcaataatatcagtcactatttaatcataatactttaacaaggcatagaaccaaaatgatattaataaataaagttagagg 27801652  T
Q  101 atccacataa 110  Q
    ||||||||||    
T  27801651 atccacataa 27801642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 51509307 - 51509422
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  51509307 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 51509406  T
Q  101 atccacataatacaaa 116  Q
    | ||||||||||||||    
T  51509407 acccacataatacaaa 51509422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 54752425 - 54752310
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||| |||||| |    
T  54752425 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaataaagttagagg 54752326  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  54752325 acccacataacacaaa 54752310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 11256365 - 11256268
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||||||    
T  11256365 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttaga 11256268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 10506136 - 10506251
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  10506136 atatgaaccataacaattaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 10506235  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  10506236 acccacataacacaaa 10506251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22152107 - 22151992
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||| |||||| |    
T  22152107 atatgaaccataatagttaccaataatatcagtcactatttaatcataataccttaacaatgaataggaccaaaatgatactaataaataaagttagagg 22152008  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  22152007 acccacataacacaaa 22151992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26318370 - 26318485
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||  || |||||||||||||||||||| |||||| |    
T  26318370 atatgaaccataacagttaccaataatattagtcactatttaatcataataccttaacaaagaatatgaccaaaatgatactaataaataaagttagagg 26318469  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  26318470 acccacataacacaaa 26318485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29818439 - 29818324
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||  || |||||||||||||||||||| |||||| |    
T  29818439 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaataaaacatatgaccaaaatgatactaataaataaagttagagg 29818340  T
Q  101 atccacataatacaaa 116  Q
    ||||| |||| |||||    
T  29818339 atccatataacacaaa 29818324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39241620 - 39241505
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  39241620 atatgaaccataacaattatcaataatatcagtcactatttaatcataataccttaacaagacataagaccaaaatgatactaataaataaagttagagg 39241521  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  39241520 acccacataacacaaa 39241505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 39951619 - 39951504
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||  || |||||||||||||||||||| |||| | |    
T  39951619 atatgaaccataacagttatcaataatatcagtcactatttaatcataatatcttaacaaggcatatgaccaaaatgatactaataaataaagttaaagg 39951520  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  39951519 acccacataacacaaa 39951504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 42592046 - 42591931
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  42592046 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 42591947  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  42591946 acccacataacacaaa 42591931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 54108091 - 54108205
Alignment:
Q  2 tatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaaga 101  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||  || |||||||||||||||||||| |||||| ||    
T  54108091 tatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaataaagttagagga 54108190  T
Q  102 tccacataatacaaa 116  Q
     |||||||| |||||    
T  54108191 cccacataacacaaa 54108205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39664372 - 39664481
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| |    
T  39664372 atatgaactataacatttaccaataatatcagtcattatttaatcataataccttaacaaggcatagaaccaaaatgatactaataaataaagttagagg 39664471  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  39664472 acccacataa 39664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 53716555 - 53716458
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||| ||||||    
T  53716555 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaataaagttaga 53716458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12203739 - 12203854
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||  || |||||||||||||||||||| |||||| |    
T  12203739 atatgaaccataacagttaccaataatatcagtcactgtttaatcataataccttaacaaaacatattaccaaaatgatactaataaataaagttagagg 12203838  T
Q  101 atccacataatacaaa 116  Q
      |||||||| |||||    
T  12203839 tcccacataacacaaa 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24428829 - 24428713
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| |  |||||||||||||||||| | |||||| |    
T  24428829 atatgaagcataatagttaccaataatatcagtcactatttaatcataataccttaagaaggcataggagcaaaatgatactaataaattaagttagagg 24428730  T
Q  101 atccacataatacaaat 117  Q
    |||||||||| ||||||    
T  24428729 atccacataacacaaat 24428713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22201878 - 22201763
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  22201878 atatgaaccataatagttaccaataatattagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 22201779  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  22201778 actcacataacacaaa 22201763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 47669521 - 47669406
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| | |||  || |||||||||||||||||||| |||||| |    
T  47669521 atatgaaccataacagttatcaataatatctatcactatttaatcataatatcttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 47669422  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  47669421 acccacataacacaaa 47669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46152875 - 46152778
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| ||||||    
T  46152875 atatgaaccataaccgttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttaga 46152778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5900611 - 5900726
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  5900611 atatgaaccataacaattaccaaaaatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 5900710  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  5900711 acccacataacacaaa 5900726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15986496 - 15986382
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| | | |||| || |||||||||||||||||||| ||||||      
T  15986496 atatgaaccataatagttaccaataatatcagtcactatttaatcataataccttaac-acgaataggaccaaaatgatactaataaataaagttagaga 15986398  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  15986397 acccacataacacaaa 15986382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16931868 - 16931753
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||| || ||||||||||||| ||||||||||| ||||||||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  16931868 atatgaaccataacagctaccaataatatcagtaactatttaatcttaataccttaacaagacatatgaccaaaatgatactaataaataaagttagagg 16931769  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  16931768 acccacataacacaaa 16931753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21969891 - 21969776
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| | |||  || |||| ||||||||||||||| |||||| |    
T  21969891 atatgaaccataatagttaccaataatatcagtcactatttaaacataataccttaacaaggaataagaccaaaacgatactaataaataaagttagagg 21969792  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  21969791 acccacataacacaaa 21969776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21992327 - 21992212
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||| | |||  || |||| ||||||||||||||| |||||| |    
T  21992327 atatgaaccataatagttaccaataatatcagtcactatttaaacataataccttaacaaggaataagaccaaaacgatactaataaataaagttagagg 21992228  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  21992227 acccacataacacaaa 21992212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32633253 - 32633368
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||   |||  || |||||||||||||||||||| |||||| |    
T  32633253 atatgaatcataacagttaccaataatatcagtcactatttaatcataatatcttaacaagaaatatgaccaaaatgatactaataaataaagttagagg 32633352  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  32633353 acccacataacacaaa 32633368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 18464714 - 18464628
Alignment:
Q  5 gaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataa 91  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||  || ||||||||||||||||||||    
T  18464714 gaaccataacagttaccaataatatcagtcactatttaaccataataccttaacaatgcatatgaccaaaatgatactaataaataa 18464628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 41835114 - 41835211
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | |||  || |||||||||||||||||||| ||||||    
T  41835114 atatgaaccataacagttaccaataatatcagtcactatttaatcaaaatacattaacaaggaatatgaccaaaatgatactaataaataaagttaga 41835211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 19883502 - 19883406
Alignment:
Q  1 atatgaaccataacagttatcaat-aatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgtta 96  Q
    ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||  | |||||| |||||||||||||||||||| ||||    
T  19883502 atatgaaccataacatttaccaattaatatcagtcactatttaatcataataccttaacaagacttagaaccaaaatgatactaataaataaagtta 19883406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1994357 - 1994471
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  1994357 atatgaaccataacagttatcaataatatcgctcactatttaatcataat-tcttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 1994455  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  1994456 acccacataacacaaa 1994471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21569007 - 21568893
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||| | ||||| ||||||||| ||||||||||||||||||||| |||||||| |||||  || |||||||||||||||||||| |||||| |    
T  21569007 atatgaaccattatagttaccaataatattagtcactatttaatcataatatcttaacaaggcatatgaccaaaatgatactaataaataaggttagagg 21568908  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  21568907 a-ccacataacacaaa 21568893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44894002 - 44893887
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||| |||||||||||||||| ||||||||| ||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  44894002 atatgaaccataacaattaccaatgatatcagtcactatttgatcataatatcttaacaagacatatgaccaaaatgatactaataaataaagttagagg 44893903  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  44893902 acccacataacacaaa 44893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47303207 - 47303315
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||  |  ||||||||| |||||||||| |||||| |    
T  47303207 atatgaatcataacagttaccaataatatcagtcactatttaatcataataccttaataaggcatatgatcaaaatgata-taataaataaagttagagg 47303305  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  47303306 acccacataa 47303315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 4757682 - 4757796
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||  |||| ||| | ||||||| |||||||| ||||||||||| |||||| |    
T  4757682 atatgaaccataacagttaccaataatatcggtcactatttgatcataat-tcttatcaaggaatagaaccaaaatgatgctaataaataaagttagagg 4757780  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  4757781 acccacataacacaaa 4757796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 4773502 - 4773395
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||| |   |||| || |||||||||||||||||||| |||||| ||     
T  4773502 atgaaacataacaattaccaataatatcagtcactatttaatcataatatcttaacgagatataggaccaaaatgatactaataaataaagttagaggac 4773403  T
Q  103 ccacataa 110  Q
    ||||||||    
T  4773402 ccacataa 4773395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28986348 - 28986395
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcata 48  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28986348 atatgaaccataacagttaccaataatatcagtcactatttaatcata 28986395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 8688 - 8575
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||| ||     
T  8688 atgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggac 8589  T
Q  103 ccacataatacaaa 116  Q
    |||||||| |||||    
T  8588 ccacataacacaaa 8575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 1e-38; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44332707 - 44332816
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||| |    
T  44332707 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttagagg 44332806  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  44332807 acccacataa 44332816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 6357027 - 6356912
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||||| |    
T  6357027 atatgaaccataacagttatcaataatatcaatcactgtttaatcataataccttaacaaggaatagaaccaaaatgatactaataaataaagttagagg 6356928  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  6356927 acccacataacacaaa 6356912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 21391378 - 21391493
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  |  |||||||||||||||||||| |||||| |    
T  21391378 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataagatcaaaatgatactaataaataaagttagatg 21391477  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  21391478 atccacataacacaaa 21391493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31638131 - 31638238
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  31638131 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 31638230  T
Q  101 atccacat 108  Q
    ||||||||    
T  31638231 atccacat 31638238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 33716850 - 33716735
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  ||||| || |||||||||||||||||||| |||||| |    
T  33716850 atatgaaccataacagttaccaataatatcagtcattatttaatcataataccttaacaagacataggaccaaaatgatactaataaataaagttagagg 33716751  T
Q  101 atccacataatacaaa 116  Q
    | ||||||||||||||    
T  33716750 acccacataatacaaa 33716735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 48626251 - 48626367
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  48626251 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 48626350  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  48626351 acccacataacacaaat 48626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17359443 - 17359328
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||   |||| || |||||||||||||||||||| |||||| |    
T  17359443 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagaaataggaccaaaatgatactaataaataaagttagagg 17359344  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  17359343 acccacataacacaaa 17359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41751912 - 41751797
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||||| || ||||| |||||||||||||| ||||||||    
T  41751912 atatgaatcataacagttaccaataatatcagtcactatttaatcataataacttaacaagacataggaccaaaataatactaataaataaagttagaag 41751813  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  41751812 atccacataacacaaa 41751797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41453193 - 41453308
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  41453193 atatgaaccataacagttaccaataatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 41453292  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  41453293 acccacataacacaaa 41453308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7579060 - 7579169
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  7579060 atatgaaccataacagttaccaataatatcaatcactatttaatcataataccttaacaaggaataagaccaaaatgatactaataaataaagttagagg 7579159  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  7579160 acccacataa 7579169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43247677 - 43247568
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  43247677 atatgaaccataccagttaccagtaatatcagtcactatttaatcataataccttaacaatgcataagaccaaaatgatactaataaataaagttagagg 43247578  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  43247577 acccacataa 43247568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 28298081 - 28297966
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |  ||||  || |||||||||||||||||||| |||||| |    
T  28298081 atatgaaccataaaagttattaataatatcagtcactatttaatcataataccttaactagtcatatgaccaaaatgatactaataaataaagttagagg 28297982  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  28297981 acccacataacacaaa 28297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 36423631 - 36423515
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| | ||| ||||||||||||||| |||||||||||||||| | | |||| || |||||||||||||||||||| |||||| |    
T  36423631 atatgaaccataacagttaccgatagtatcagtcactatttgatcataataccttaaccaggtataggaccaaaatgatactaataaataaagttagagg 36423532  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  36423531 acccacataacacaaat 36423515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10526572 - 10526458
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| | |||| | || |||||||||||||||||||| |||||| |    
T  10526572 atatgaaacataacagttaccaataatatcagtcaatatttaatcataataccttaac-aggcattggaccaaaatgatactaataaataaagttagagg 10526474  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  10526473 acccacataacacaaa 10526458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34037099 - 34037208
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||  || ||||||||| |||||||||| |||||| |    
T  34037099 atatgaatcataacagttacaaataatatcagtcactatttaatcataataccttaacaaaaaatatgaccaaaatgatattaataaataaagttagagg 34037198  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  34037199 acccacataa 34037208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35146886 - 35146983
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || ||||||||| | |||||||| ||||||    
T  35146886 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgatattgataaataaagttaga 35146983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 8542761 - 8542646
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||| | |||  || |||||||| ||||||||||| ||||||||    
T  8542761 atatgaaccataacagttaccagtaatatccgtcaatatttaatcataataccttaacaaggaatatgaccaaaatgatgctaataaataaagttagaag 8542662  T
Q  101 atccacataatacaaa 116  Q
    | ||||| || |||||    
T  8542661 acccacacaacacaaa 8542646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19681683 - 19681798
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||||   |||  || |||||||||||||||||||| |||||| |    
T  19681683 atatgaaccataacagttaccaataatatcagtcaatatttaatcataatgcattaacaagaaatatgaccaaaatgatactaataaataaagttagagg 19681782  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  19681783 acccacataacacaaa 19681798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28286305 - 28286420
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||| || | ||||  | |||||||||||||||||||| |||||| |    
T  28286305 atatgaaccattacagttgccaataatatcggtcactatttaatcataataccttaagaaggaatagttccaaaatgatactaataaataaagttagagg 28286404  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  28286405 acccacataacacaaa 28286420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17363496 - 17363437
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaa 60  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17363496 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaa 17363437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 6356545 - 6356432
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||| |   |||| || |||||||||||||||||||| |||||| ||     
T  6356545 atgaaacataacaattaccaataatatcagtcactatttaatcataatatcttaacgagatataggaccaaaatgatactaataaataaagttagaggac 6356446  T
Q  103 ccacataatacaaa 116  Q
    ||| |||| |||||    
T  6356445 ccatataacacaaa 6356432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40673195 - 40673308
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||  |||||| ||||||| |||||  ||||||||  ||||||||||||| |||||| |    
T  40673195 atatgaatcataacacttaccaataatatcagtcactatttaattctaatactttaacaaggcatatgactaaaat--tactaataaataaagttagagg 40673292  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  40673293 acccacataacacaaa 40673308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 41191870 - 41191988
Alignment:
Q  1 atatgaaccataacagttatcaata---atatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttag 97  Q
    ||||||||||||| ||||| |||||   |||||||||||||||||||||||||||||||| ||   |||  || |||||||||||||||||||| |||||    
T  41191870 atatgaaccataatagttaccaataataatatcagtcactatttaatcataataccttaataagaaatatgaccaaaatgatactaataaataaagttag 41191969  T
Q  98 aagatccacataatacaaa 116  Q
    | || |||||||| |||||    
T  41191970 aggacccacataacacaaa 41191988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8937037 - 8937152
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||| | |||  || || |||||| |||||||||| ||||||      
T  8937037 atatgaaccaaaacagttaccaataatatcaatcactatttaatcacaataccttaacaaggaatatgaccaacatgatattaataaataaagttagaga 8937136  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  8937137 acccacataacacaaa 8937152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 17750123 - 17750187
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcat 65  Q
    |||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  17750123 atatgaactataaaagttatcaataatatcagtcattatttaatcataataccttaacaaggcat 17750187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1114307 - 1114257
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataata 51  Q
    ||||||||||||||||||| |||||||| | ||||||||||||||||||||    
T  1114307 atatgaaccataacagttaccaataatacccgtcactatttaatcataata 1114257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 50668 - 50779
Alignment:
Q  5 gaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatcc 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||| || ||    
T  50668 gaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttagaggaccc 50767  T
Q  105 acataatacaaa 116  Q
    |||||| |||||    
T  50768 acataacacaaa 50779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9006379 - 9006494
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||||||||||||| |||||| |    
T  9006379 atatgaactataacagttaccaataatatcagtcactatttaatcataatacattaacaaggcataggaccaaaatgatactaataaataaagttagagg 9006478  T
Q  101 atccacataatacaaa 116  Q
    | ||||||||||||||    
T  9006479 acccacataatacaaa 9006494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 27400612 - 27400727
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||| |||||| |    
T  27400612 atatgaaccataacagttaccaataatatcagtcactatttaatcataatacattaacaaggcataagactaaaatgatactaataaataaagttagagg 27400711  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  27400712 acccacataacacaaa 27400727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 37284916 - 37285031
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  37284916 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 37285015  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  37285016 acccacataacacaaa 37285031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 45052877 - 45052992
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||| |    
T  45052877 atataaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttagagg 45052976  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  45052977 acccacataacacaaa 45052992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20306264 - 20306148
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  20306264 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 20306165  T
Q  101 atccacataatacaaat 117  Q
    |  ||||||| ||||||    
T  20306164 actcacataacacaaat 20306148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 25996046 - 25995930
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||||| || |||||||||||||||||||| |||||| |    
T  25996046 atatgaatcataacagttaccaataatatcagccactatttaatcatattaccttaacaaggcataggaccaaaatgatactaataaataaagttagagg 25995947  T
Q  101 atccacataatacaaat 117  Q
    |||||||||| ||||||    
T  25995946 atccacataacacaaat 25995930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 27547857 - 27547965
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||| |||||| |    
T  27547857 atatgaaccataacagttaccaatagtatcagtcactatttaatcataatactttaacaaagcatagtaccaaaatgatactaataaataaagttagagg 27547956  T
Q  101 atccacata 109  Q
    | |||||||    
T  27547957 acccacata 27547965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26707384 - 26707491
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  26707384 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 26707483  T
Q  101 atccacat 108  Q
    | ||||||    
T  26707484 acccacat 26707491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 49140331 - 49140446
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| |||||| |    
T  49140331 atatgaatcataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatataaccaaaatgatactaataaataaagttagagg 49140430  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  49140431 acccacataacacaaa 49140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 44322922 - 44322816
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||| |    
T  44322922 atatgaaccataacagttaccaataatatcagtcacaatttaatcataataccttaacaaggcataggaccaaaatgatactaataaataaagttagagg 44322823  T
Q  101 atccaca 107  Q
    | |||||    
T  44322822 acccaca 44322816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 31703873 - 31703761
Alignment:
Q  4 tgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatc 103  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||| ||||||||||| |||||| || |    
T  31703873 tgaaccataacagttaccaataatatccgtcactatttaatcataataccttaacaaggaatagaaccaaaatgatgctaataaataaagttagaggacc 31703774  T
Q  104 cacataatacaaa 116  Q
    ||||||| |||||    
T  31703773 cacataacacaaa 31703761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 3089604 - 3089489
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||  || |||||||||||||||||||| |||| | |    
T  3089604 atatgaatcataacagttatcaataatatcagtcactatttaatcataatactttaacaagacatatgaccaaaatgatactaataaataaagttatagg 3089505  T
Q  101 atccacataatacaaa 116  Q
    |||||||||| |||||    
T  3089504 atccacataacacaaa 3089489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12127241 - 12127356
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  12127241 atatgaaccataacagttaccaataatatcaatcactatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 12127340  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  12127341 acccacataacacaaa 12127356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12481247 - 12481362
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  12481247 atatgaaccataacagttaccaataatatccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 12481346  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  12481347 acccacataacacaaa 12481362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23476529 - 23476644
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||| |||||| |    
T  23476529 atatgaaccataacaattatcaataatatcaatcactatttaatcataataccttaacaagacataggaccaaaatgatactaataaataaagttagagg 23476628  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  23476629 actcacataacacaaa 23476644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37304290 - 37304175
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  37304290 atatgaaccataacagttaccaataatattagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 37304191  T
Q  101 atccacataatacaaa 116  Q
    | || ||||| |||||    
T  37304190 accctcataacacaaa 37304175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1762862 - 1762977
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||| |||||  || |||||||||||||||||||| |||||| |    
T  1762862 atatgaaccataacagttaccaataatatcagtcactatttaatcagaacactttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 1762961  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  1762962 acccacataacacaaa 1762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 2064399 - 2064514
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  2064399 atatgaaccataacagttaccaataatagtagtcactatttaatcataataccttaacaagacataagaccaaaatgatactaataaataaagttagagg 2064498  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  2064499 acccacataacacaaa 2064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16024159 - 16024044
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||| |||||  || |||||||||||||||||||| |||||| |    
T  16024159 atatgaaccataacagttaccaataatattagtcactatttaatcataatacctcaacaaggcatatgaccaaaatgatactaataaataaagttagagg 16024060  T
Q  101 atccacataatacaaa 116  Q
    | || ||||| |||||    
T  16024059 accctcataacacaaa 16024044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 49643859 - 49643974
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||| ||||||      
T  49643859 atatgaaccatagcagttaccaataatatcactcactatttaatcataataccttaacaaggcataggatcaaaatgatactaataaataaagttagaga 49643958  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  49643959 acccacataacacaaa 49643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 4697070 - 4697167
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||| |  |||||||||||||||||||| ||||||    
T  4697070 atatgaatcataacagttaccaataatatcagtcactatttaatcataataccttaacaagacataggatcaaaatgatactaataaataaagttaga 4697167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 6797995 - 6798110
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| |||||  || ||||||||||||||||||||  ||||| |    
T  6797995 atatgaaccataacaattaccaataatattagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaaattagagg 6798094  T
Q  101 atccacataatacaaa 116  Q
    | || ||||| |||||    
T  6798095 accctcataacacaaa 6798110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37576443 - 37576328
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||| |||||||||||||| | |||| || ||||||||||| |||||||| |||||| |    
T  37576443 atatgaatcataacagttaccaataatatcggtcactatttaatcctaataccttaacaaggaataggaccaaaatgatacttataaataaagttagagg 37576344  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  37576343 acccacataacacaaa 37576328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 37585881 - 37585992
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||  ||||  || ||||| |||||||||||||| |||||| |    
T  37585881 atatgaaccataacagttactaataatatcagtcactatttaatcataatatcttaacaagacatatgaccaaaataatactaataaataaagttagagg 37585980  T
Q  101 atccacataata 112  Q
    | ||||||||||    
T  37585981 acccacataata 37585992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 38127970 - 38127856
Alignment:
Q  2 tatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaaga 101  Q
    ||||||| ||||||||||  |||||||||| ||||||||||||||||||||||||| || |||||  || |||||||||||||||||||| |||||| ||    
T  38127970 tatgaactataacagttactaataatatcattcactatttaatcataataccttaataaggcataagaccaaaatgatactaataaataaagttagagga 38127871  T
Q  102 tccacataatacaaa 116  Q
     |||||||| |||||    
T  38127870 cccacataaaacaaa 38127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35612270 - 35612367
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||  || |||||||||||||||||||| ||||||    
T  35612270 atatgaatcataacatttaccaataatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaataaagttaga 35612367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 8762587 - 8762701
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||| |||||| ||| ||||||||||||| |||||||| |||||||||||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  8762587 atatgaactataacatttaccaataatatcagttactatttattcataataccttaacaagacatatgaccaaaatgatactaataaataaagttagagg 8762686  T
Q  101 atccacataatacaa 115  Q
    | |||||||| ||||    
T  8762687 acccacataacacaa 8762701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 4330043 - 4330140
Alignment:
Q  19 atcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||| ||||||| |||||||||| |||||||||||||||| | |||  | ||||||||||||||||||||| ||||||||| |||||||| |||||    
T  4330043 atcaatgatatcagccactatttaaccataataccttaacaaggaatatgattaaaatgatactaataaataaagttagaagacccacataacacaaa 4330140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 39486390 - 39486496
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| |||||  |||||||||| ||||||||||||||||||||         |||||| || |||||||||||||||||||| |||||| |    
T  39486390 atatgaaccataatagttactaataatatcaatcactatttaatcataatac---------gcataggaccaaaatgatactaataaataaagttagagg 39486480  T
Q  101 atccacataatacaaa 116  Q
    | ||| |||| |||||    
T  39486481 acccatataacacaaa 39486496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 15706 - 15595
Alignment:
Q  5 gaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatcc 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |||||| || ||    
T  15706 gaaccataacagttaccaataatatcagtcactatttaatcataatatcttaacaaggcataggacaaaaatgatactaataaataaagttagaggaccc 15607  T
Q  105 acataatacaaa 116  Q
    |||||| |||||    
T  15606 acataacacaaa 15595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 26181888 - 26182003
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  26181888 atatgaaccataacagttactaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 26181987  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  26181988 acccacataacacaaa 26182003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34735531 - 34735646
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | |||| || |||||||||||||||||||| |||||| |    
T  34735531 atatgaaccataacagttatcaattatatcagtcactatttaatcctaataccttaacaaggaataggaccaaaatgatactaataaataaagttagagg 34735630  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  34735631 acccacataacacaaa 34735646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2148074 - 2148183
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  2148074 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaataaagttagagg 2148173  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  2148174 acccacataa 2148183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8174073 - 8174188
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||| ||  |||||||||||||||||||| |||||| |    
T  8174073 atatgaaccataacaattaccaataatatcagtcactatttaatcataataccttaacaaggaataaaaacaaaatgatactaataaataaagttagagg 8174172  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  8174173 acccacataacacaaa 8174188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 41474344 - 41474229
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||| |||||| |  |||||||||||||||||||| |||||| |    
T  41474344 atatgaaccataacagttaccaatactatcagtcactatttaattataataccttaacaaggcataggatcaaaatgatactaataaataaagttagatg 41474245  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  41474244 acccacataacacaaa 41474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 36713847 - 36713735
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||  |||||||||||| |||||| |    
T  36713847 atatgaaccataacagttaccaataatatcagtcacta-ttaatcataataccttaacaaggcatagaaccaaaatg--actaataaataaagttagagg 36713751  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  36713750 acccacataacacaaa 36713735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13193250 - 13193135
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  13193250 atatgaaccataacagttaccaataatatgagtcattatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 13193151  T
Q  101 atccacataatacaaa 116  Q
    | | |||||| |||||    
T  13193150 accaacataacacaaa 13193135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 15744719 - 15744604
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||  || |||||||| ||||||||||| |||||| |    
T  15744719 atatgaaccataacagttaccaataatatccgtcactatttaatcataataccttaacaaggaatatgaccaaaatgatgctaataaataaagttagagg 15744620  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  15744619 acccacataacacaaa 15744604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 16305287 - 16305172
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||  ||||  || |||||||||||||||||||| |||||| |    
T  16305287 atatgaaccataacagttaccaataatatcaatcactatttaatcataatatcttaacaagacataagaccaaaatgatactaataaataaagttagagg 16305188  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  16305187 acccacataacacaaa 16305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 24138710 - 24138809
Alignment:
Q  17 ttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  24138710 ttatcaataatatcagtcactatttaatcataatatcttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 24138809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29472504 - 29472389
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |||||| |    
T  29472504 atatgaactataacaattaccaataatatcagtcactatttaatcataataccttaacaaggcatatgaccaaaatgatactaataaataaagttagagg 29472405  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  29472404 actcacataacacaaa 29472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19815892 - 19816001
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  |  |||||||||||||||||||| || ||| |    
T  19815892 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgagcaaaatgatactaataaataaagtcagagg 19815991  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  19815992 acccacataa 19816001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24372155 - 24372271
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||| || | |||| || |||||||||||||||||||| |||||| |    
T  24372155 atatgaaccaaaacagttaccaataatatcagtcacaatttaatcataatactttaaaaaggaataggaccaaaatgatactaataaataaagttagagg 24372254  T
Q  101 atccacataatacaaat 117  Q
    | |||||||| ||||||    
T  24372255 acccacataacacaaat 24372271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 7469428 - 7469313
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||||| | |||| || |||||||||||| ||||||| |||||| |    
T  7469428 atatgaaccataacggttaacaataatatcactaactatttaatcataataccttaacaaggaataggaccaaaatgatactagtaaataaagttagagg 7469329  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  7469328 acccacataacacaaa 7469313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 15405944 - 15406059
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  ||||  || ||||| |||||||||||||| |||||| |    
T  15405944 atatgaaccataacagttaccaataatatcagtcactgtttaatcataataccttaacaagacatatgaccaaaataatactaataaataaagttagagg 15406043  T
Q  101 atccacataatacaaa 116  Q
    |  ||||||| |||||    
T  15406044 actcacataacacaaa 15406059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 38332946 - 38332851
Alignment:
Q  21 caataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  38332946 caataatatcagtcactatttaatcataatatcttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataaaacaaa 38332851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 10992113 - 10991998
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||||||| |||| |||  ||||| || |||||||| ||||||||||| |||||| |    
T  10992113 atatgaaccataagagttaccaataatatttgtcactatttaatcataatatcttagcaagacataggaccaaaatgatgctaataaataaagttagagg 10992014  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  10992013 acccacataacacaaa 10991998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 19847507 - 19847621
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||  |||||||| | |||  || |||||||| ||||||||||| |||||| |    
T  19847507 atatgaaccataacagttaccaataatatcggtcactatttaatcataat-tcttaacaaggaatatgaccaaaatgatgctaataaataaagttagagg 19847605  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  19847606 acccacataacacaaa 19847621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 17052316 - 17052205
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||      ||  || |||||||||||||||||||| |||||| |    
T  17052316 atatgaaccataacagttatctataatatcagtcattatttaatcataataccttaac----gttaagaccaaaatgatactaataaataaagttagagg 17052221  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  17052220 acccacataacacaaa 17052205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7496168 - 7496282
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| ||||||||||| |||||||  |||||||| | |||| || |||||||| ||||||||||| ||||||      
T  7496168 atatgaaccataacagttaccaataatatcggtcactatttactcataat-tcttaacaaggaataggaccaaaatgatgctaataaataaagttagaga 7496266  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  7496267 acccacataacacaaa 7496282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 12860577 - 12860670
Alignment:
Q  23 ataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||| | ||||||||||||||||||||||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  12860577 ataatacccgtcactatttaatcataataccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 12860670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 113619 - 113519
Alignment:
Q  10 ataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacata 109  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| || |||||||    
T  113619 ataacaattagcaataatatcagtcactatttaatcataataccttaacaaggcatagaaccaaaatgatactaataaataaagttagaggagccacata 113520  T
Q  110 a 110  Q
    |    
T  113519 a 113519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 349335 - 349226
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| | |||  || |||||||||||||||||||| |||||| |    
T  349335 atatgaaccataacagttaccaataatatcagtcaatatttaatcataataccttaacaaggaatatgaccaaaatgatactaataaataaagttagagg 349236  T
Q  101 atccacataa 110  Q
    | ||||||||    
T  349235 acccacataa 349226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18535 - 18420
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||  || ||||||||||||||||||||  ||||| |    
T  18535 atatgaaccataacagttaccaataatatcagtcactatttaatcataataccttaacaagacatatgaccaaaatgatactaataaataaaattagagg 18436  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  18435 acccacataacacaaa 18420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 19970 - 19855
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||  || |||||||| ||||||||||| |||||| |    
T  19970 atatgaaccataacagttatcaataatatccgtcactatttaatcataaaaccttaacaaggaatatgaccaaaatgatgctaataaataaagttagagg 19871  T
Q  101 atccacataatacaaa 116  Q
    | ||||||||||||||    
T  19870 acccacataatacaaa 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 82046 - 82161
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||   |||| || ||||||||| |||||||||| |||||| |    
T  82046 atatgaaccataacagttaccaataatatcagtcactatttaatcataatatcttaacaagaaataggaccaaaatgatattaataaataaagttagagg 82145  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  82146 acccacataacacaaa 82161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21012 - 20898
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||  |||||||| | |||| || |||||||| ||||||||||| |||||| |    
T  21012 atatgaaccataacagttaccaataatatcggtcactatttaatcataat-tcttaacaaggaataggaccaaaatgatgctaataaataaagttagagg 20914  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  20913 acccacataacacaaa 20898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 24424 - 24309
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| | | || || ||||||||  |||||||||| |||||| |    
T  24424 atatgaaccataacagttaccaataatatccgtcactatttaatcataatatcttaacaaggaacaggaccaaaatgatgttaataaataaagttagagg 24325  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  24324 acccacataacacaaa 24309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14323 - 14438
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||||||| |||||  || |||||||| ||||||||||| |||||| |    
T  14323 atatgaaccataagagttaccaataatatttgtcactatttaatcataataccttaacaaggcatatgaccaaaatgatgctaataaataaagttagagg 14422  T
Q  101 atccacataatacaaa 116  Q
    | ||| |||| |||||    
T  14423 acccagataacacaaa 14438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 116
Target Start/End: Complemental strand, 46010 - 45903
Alignment:
Q  9 cataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacat 108  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||  || ||||||| |||||||| ||| |||||| || ||||||    
T  46010 cataacagttaccaataatatcagtcactatttaatcataataccttaacaaggaatatgaccaaaatgaaactaataagtaaagttagaggacccacat 45911  T
Q  109 aatacaaa 116  Q
    || |||||    
T  45910 aacacaaa 45903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 21771 - 21658
Alignment:
Q  3 atgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagat 102  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||  ||||| |   |||| || |||||||||||||||||||| |||||| ||     
T  21771 atgaaacataacaattaccaataatatcagtcactatttaatcataatattttaacgagatataggaccaaaatgatactaataaataaagttagaggac 21672  T
Q  103 ccacataatacaaa 116  Q
    |||||||| |||||    
T  21671 ccacataacacaaa 21658  T

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Target: scaffold0029 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 73023 - 72909
Alignment:
Q  1 atatgaaccataacagttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaag 100  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||  |||||||| | |||  || |||||||| ||||||||||| |||||| |    
T  73023 atatgaaccataacagttaccaataatattggtcactatttaatcataat-tcttaacaaggaataagaccaaaatgatgctaataaataaagttagagg 72925  T
Q  101 atccacataatacaaa 116  Q
    | |||||||| |||||    
T  72924 acccacataacacaaa 72909  T

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Target: scaffold0246 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 116
Target Start/End: Complemental strand, 6241 - 6145
Alignment:
Q  17 ttatcaataatatcagtcactatttaatcataataccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||  |  |||||||   |||||||||| |||||| ||||||||||| |||||    
T  6241 ttatcaataatatcagtcactatttaatcataataccttaacaagacatatgatcaaaatga---taataaataaagttagaggatccacataacacaaa 6145  T

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