View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16176_high_17 (Length: 260)
Name: NF16176_high_17
Description: NF16176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16176_high_17 |
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Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 22 - 249
Target Start/End: Original strand, 10326503 - 10326730
Alignment:
| Q |
22 |
gtaacattaaacatccaaaaatataaataatgatatccaatttggaccaatcagaaagtacaaaatgaaacatcgttctcatttctaaggttaatcatac |
121 |
Q |
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| T |
10326503 |
gtaacattaaacatccaaaaatataaataatgatatccaatttggaccaatcagaaagtacaaaatgaaacatcgttctcatttctaaggttaatcatac |
10326602 |
T |
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| Q |
122 |
tatagttaaggaactttgtttggtaaaacaaattaagaggattaacattggtcatgcatattttaatggttaattaatgtatctaaaagtcatgatatgc |
221 |
Q |
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| T |
10326603 |
tatagttaaggaactttgtttggtaaaacaaattaagaggattaacattggtcatgcatattttaatggttaattaatgtatctaaaagtcatgatatgc |
10326702 |
T |
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| Q |
222 |
caccttatagatttagtgcatcattcat |
249 |
Q |
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| T |
10326703 |
caccttatagatttagtgcatcattcat |
10326730 |
T |
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