View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16176_low_11 (Length: 394)

Name: NF16176_low_11
Description: NF16176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16176_low_11
NF16176_low_11
[»] chr5 (16 HSPs)
chr5 (52-319)||(29199191-29199458)
chr5 (1-55)||(29199110-29199164)
chr5 (1-48)||(36440365-36440412)
chr5 (1-50)||(34264511-34264560)
chr5 (1-50)||(37424425-37424474)
chr5 (1-48)||(2183181-2183228)
chr5 (1-48)||(9989561-9989608)
chr5 (1-48)||(27186111-27186158)
chr5 (1-39)||(16860594-16860632)
chr5 (1-48)||(16860468-16860515)
chr5 (1-36)||(32288254-32288289)
chr5 (1-39)||(11316192-11316230)
chr5 (63-116)||(9989470-9989523)
chr5 (1-50)||(24040248-24040297)
chr5 (75-116)||(24040349-24040390)
chr5 (72-116)||(2183090-2183134)
[»] chr4 (59 HSPs)
chr4 (162-319)||(12652447-12652603)
chr4 (1-50)||(19088504-19088553)
chr4 (1-50)||(38339730-38339779)
chr4 (52-116)||(33091692-33091756)
chr4 (1-48)||(24898427-24898474)
chr4 (1-48)||(50769059-50769106)
chr4 (1-43)||(33091623-33091665)
chr4 (1-42)||(6505707-6505748)
chr4 (1-50)||(8592207-8592256)
chr4 (1-50)||(21763344-21763393)
chr4 (1-50)||(23755581-23755630)
chr4 (1-50)||(37206590-37206639)
chr4 (1-42)||(41878030-41878071)
chr4 (1-50)||(46849832-46849881)
chr4 (1-50)||(50508620-50508669)
chr4 (52-116)||(50768968-50769032)
chr4 (72-116)||(52557346-52557390)
chr4 (1-48)||(6712201-6712248)
chr4 (7-50)||(19508576-19508619)
chr4 (1-48)||(25181977-25182024)
chr4 (1-40)||(44991451-44991490)
chr4 (1-48)||(53751067-53751114)
chr4 (52-110)||(23756039-23756097)
chr4 (8-50)||(30683691-30683733)
chr4 (1-43)||(43566548-43566590)
chr4 (1-50)||(623842-623891)
chr4 (1-50)||(14985569-14985618)
chr4 (1-50)||(15477808-15477857)
chr4 (1-50)||(36122596-36122645)
chr4 (52-117)||(37206666-37206731)
chr4 (13-50)||(53259301-53259338)
chr4 (54-110)||(14985484-14985540)
chr4 (52-116)||(30683767-30683831)
chr4 (52-116)||(38339639-38339703)
chr4 (72-116)||(44957536-44957580)
chr4 (52-116)||(44991517-44991581)
chr4 (1-48)||(8398195-8398242)
chr4 (1-48)||(42855504-42855551)
chr4 (54-117)||(43734527-43734590)
chr4 (1-43)||(16037964-16038006)
chr4 (1-39)||(39448662-39448700)
chr4 (1-35)||(44957627-44957661)
chr4 (55-116)||(1433513-1433574)
chr4 (1-42)||(41751987-41752028)
chr4 (52-117)||(43566617-43566682)
chr4 (7-48)||(43734451-43734492)
chr4 (52-117)||(53751141-53751206)
chr4 (72-116)||(623938-623982)
chr4 (1-37)||(1433447-1433483)
chr4 (52-116)||(8592116-8592180)
chr4 (52-116)||(16038033-16038097)
chr4 (72-116)||(19088600-19088644)
chr4 (52-116)||(19508652-19508716)
chr4 (72-116)||(21763440-21763484)
chr4 (54-98)||(23755659-23755703)
chr4 (72-116)||(42855598-42855642)
chr4 (72-116)||(46849928-46849972)
chr4 (52-116)||(53259377-53259441)
chr4 (1-37)||(53995110-53995146)
[»] chr6 (32 HSPs)
chr6 (52-116)||(18053103-18053167)
chr6 (3-50)||(7270193-7270240)
chr6 (1-50)||(21856718-21856767)
chr6 (52-116)||(5938052-5938116)
chr6 (1-48)||(6236086-6236133)
chr6 (7-50)||(35167653-35167696)
chr6 (1-43)||(7270867-7270909)
chr6 (1-50)||(3423333-3423382)
chr6 (1-50)||(5311064-5311113)
chr6 (1-50)||(5937976-5938025)
chr6 (1-50)||(9046324-9046373)
chr6 (52-116)||(32993254-32993318)
chr6 (1-39)||(32993189-32993227)
chr6 (1-39)||(34994554-34994592)
chr6 (1-50)||(26957200-26957249)
chr6 (1-42)||(31237984-31238025)
chr6 (1-42)||(31247354-31247395)
chr6 (1-50)||(32753411-32753460)
chr6 (52-116)||(7270776-7270840)
chr6 (52-116)||(35167731-35167795)
chr6 (1-36)||(25176834-25176869)
chr6 (1-43)||(5639343-5639385)
chr6 (54-116)||(7270100-7270162)
chr6 (54-116)||(34890791-34890853)
chr6 (11-48)||(2517250-2517287)
chr6 (52-109)||(3423409-3423466)
chr6 (53-110)||(21540217-21540274)
chr6 (1-50)||(34890882-34890931)
chr6 (72-116)||(5310973-5311017)
chr6 (72-116)||(6137637-6137681)
chr6 (72-116)||(24744475-24744519)
chr6 (72-116)||(26600504-26600548)
[»] chr3 (55 HSPs)
chr3 (1-53)||(47669497-47669549)
chr3 (1-50)||(1994332-1994381)
chr3 (1-50)||(39241596-39241645)
chr3 (1-50)||(53716531-53716580)
chr3 (1-50)||(54108065-54108114)
chr3 (1-50)||(54752401-54752450)
chr3 (1-48)||(8474011-8474058)
chr3 (1-48)||(12203716-12203763)
chr3 (1-48)||(39951595-39951642)
chr3 (4-50)||(1999491-1999537)
chr3 (1-43)||(29818415-29818457)
chr3 (52-110)||(39664423-39664481)
chr3 (1-43)||(41835096-41835138)
chr3 (1-50)||(32633228-32633277)
chr3 (1-53)||(11256341-11256393)
chr3 (2-50)||(19883479-19883527)
chr3 (54-110)||(27801642-27801698)
chr3 (1-48)||(4757659-4757706)
chr3 (1-48)||(16931844-16931891)
chr3 (1-48)||(28986325-28986372)
chr3 (1-48)||(42592022-42592069)
chr3 (1-39)||(26318356-26318394)
chr3 (1-50)||(10506111-10506160)
chr3 (1-50)||(15986472-15986521)
chr3 (1-50)||(24428805-24428854)
chr3 (1-50)||(27801727-27801776)
chr3 (52-116)||(8474085-8474149)
chr3 (52-116)||(10506187-10506251)
chr3 (52-116)||(22151992-22152056)
chr3 (52-116)||(26318421-26318485)
chr3 (72-116)||(51509378-51509422)
chr3 (52-116)||(54752310-54752374)
chr3 (11-50)||(5900586-5900625)
chr3 (1-40)||(22152083-22152122)
chr3 (1-48)||(47303184-47303231)
chr3 (1-48)||(51509284-51509331)
chr3 (52-98)||(11256268-11256314)
chr3 (2-48)||(44893979-44894025)
chr3 (1-50)||(18464694-18464743)
chr3 (1-50)||(21969867-21969916)
chr3 (1-50)||(21992303-21992352)
chr3 (1-42)||(22201854-22201895)
chr3 (72-117)||(24428713-24428758)
chr3 (64-116)||(4757744-4757796)
chr3 (52-116)||(5900662-5900726)
chr3 (52-116)||(12203790-12203854)
chr3 (72-116)||(16931753-16931797)
chr3 (52-116)||(22201763-22201827)
chr3 (72-116)||(29818324-29818368)
chr3 (72-116)||(32633324-32633368)
chr3 (72-116)||(39241505-39241549)
chr3 (72-116)||(42591931-42591975)
chr3 (72-116)||(44893887-44893931)
chr3 (72-116)||(47669406-47669450)
chr3 (72-116)||(54108161-54108205)
[»] scaffold0182 (2 HSPs)
scaffold0182 (1-50)||(19946-19995)
scaffold0182 (72-116)||(19855-19899)
[»] chr7 (37 HSPs)
chr7 (1-50)||(6357003-6357052)
chr7 (7-50)||(36423613-36423656)
chr7 (1-43)||(19681665-19681707)
chr7 (1-50)||(7579035-7579084)
chr7 (1-50)||(8937012-8937061)
chr7 (1-50)||(21391353-21391402)
chr7 (1-50)||(31638106-31638155)
chr7 (1-50)||(41453168-41453217)
chr7 (1-50)||(44332682-44332731)
chr7 (52-116)||(6356912-6356976)
chr7 (52-116)||(33716735-33716799)
chr7 (53-116)||(41751797-41751860)
chr7 (7-50)||(43247659-43247702)
chr7 (1-48)||(48626228-48626275)
chr7 (1-43)||(41751888-41751930)
chr7 (52-110)||(44332758-44332816)
chr7 (1-50)||(1114283-1114332)
chr7 (7-48)||(8542743-8542784)
chr7 (72-116)||(21391449-21391493)
chr7 (52-108)||(31638182-31638238)
chr7 (7-50)||(34037074-34037117)
chr7 (1-40)||(35146871-35146910)
chr7 (1-48)||(40673172-40673219)
chr7 (1-48)||(41191847-41191894)
chr7 (1-39)||(17750109-17750147)
chr7 (1-43)||(28298057-28298099)
chr7 (52-110)||(43247568-43247626)
chr7 (72-117)||(36423515-36423560)
chr7 (72-117)||(48626322-48626367)
chr7 (72-116)||(10526458-10526502)
chr7 (72-116)||(17359328-17359372)
chr7 (72-116)||(19681754-19681798)
chr7 (8-48)||(28286282-28286322)
chr7 (72-116)||(28286376-28286420)
chr7 (72-116)||(28297966-28298010)
chr7 (72-116)||(41191944-41191988)
chr7 (52-116)||(41453244-41453308)
[»] chr2 (34 HSPs)
chr2 (1-50)||(16305263-16305312)
chr2 (2-43)||(34735513-34735554)
chr2 (1-48)||(15405921-15405968)
chr2 (1-48)||(36713823-36713870)
chr2 (1-48)||(41474320-41474367)
chr2 (5-43)||(17052296-17052334)
chr2 (1-50)||(2148049-2148098)
chr2 (1-50)||(8174048-8174097)
chr2 (1-50)||(13193226-13193275)
chr2 (1-50)||(15744695-15744744)
chr2 (7-48)||(26181865-26181906)
chr2 (1-48)||(7496145-7496192)
chr2 (1-48)||(10992089-10992136)
chr2 (1-48)||(19815869-19815916)
chr2 (53-116)||(24138746-24138809)
chr2 (53-116)||(38332851-38332914)
chr2 (1-43)||(24138238-24138280)
chr2 (1-42)||(19847490-19847531)
chr2 (1-50)||(29472480-29472529)
chr2 (52-116)||(26181939-26182003)
chr2 (52-116)||(34735582-34735646)
chr2 (52-116)||(41474229-41474293)
chr2 (1-48)||(7469404-7469451)
chr2 (1-40)||(24372140-24372179)
chr2 (13-50)||(12860543-12860580)
chr2 (72-117)||(24372226-24372271)
chr2 (52-116)||(36713735-36713797)
chr2 (52-116)||(7469313-7469377)
chr2 (72-116)||(8174144-8174188)
chr2 (52-116)||(12860606-12860670)
chr2 (52-116)||(13193135-13193199)
chr2 (72-116)||(16305172-16305216)
chr2 (72-116)||(17052205-17052249)
chr2 (52-116)||(29472389-29472453)
[»] chr1 (47 HSPs)
chr1 (1-50)||(23476504-23476553)
chr1 (52-117)||(25995930-25995995)
chr1 (1-50)||(37284891-37284940)
chr1 (1-49)||(16024135-16024183)
chr1 (1-48)||(37304266-37304313)
chr1 (1-43)||(1762844-1762886)
chr1 (54-116)||(9006432-9006494)
chr1 (1-43)||(44322898-44322940)
chr1 (1-50)||(9006354-9006403)
chr1 (1-50)||(27547832-27547881)
chr1 (1-50)||(49140306-49140355)
chr1 (1-49)||(6797971-6798019)
chr1 (52-116)||(45052928-45052992)
chr1 (1-48)||(12481224-12481271)
chr1 (1-48)||(26707361-26707408)
chr1 (1-40)||(27400597-27400636)
chr1 (54-109)||(27547910-27547965)
chr1 (7-50)||(37585856-37585899)
chr1 (1-39)||(2064385-2064423)
chr1 (1-51)||(8762561-8762611)
chr1 (1-39)||(20306240-20306278)
chr1 (54-116)||(27400665-27400727)
chr1 (71-116)||(4330095-4330140)
chr1 (1-50)||(4697045-4697094)
chr1 (1-50)||(37576419-37576468)
chr1 (52-116)||(31703761-31703825)
chr1 (52-116)||(37284967-37285031)
chr1 (52-116)||(49140382-49140446)
chr1 (1-48)||(25996022-25996069)
chr1 (7-50)||(39486365-39486408)
chr1 (52-107)||(44322816-44322871)
chr1 (54-116)||(1762915-1762977)
chr1 (1-39)||(3089580-3089618)
chr1 (1-39)||(45052863-45052901)
chr1 (1-43)||(49643841-49643883)
chr1 (52-117)||(20306148-20306213)
chr1 (1-50)||(31703852-31703900)
chr1 (72-116)||(2064470-2064514)
chr1 (72-116)||(3089489-3089533)
chr1 (72-116)||(12127312-12127356)
chr1 (52-116)||(12481298-12481362)
chr1 (52-116)||(23476580-23476644)
chr1 (52-108)||(26707435-26707491)
chr1 (52-116)||(37304175-37304239)
chr1 (52-116)||(37576328-37576392)
chr1 (72-116)||(38127856-38127900)
chr1 (52-116)||(49643910-49643974)
[»] chr8 (28 HSPs)
chr8 (2-50)||(37569477-37569525)
chr8 (1-48)||(5435065-5435112)
chr8 (52-111)||(11173873-11173932)
chr8 (1-50)||(15871784-15871833)
chr8 (1-50)||(38588825-38588874)
chr8 (7-43)||(7535003-7535039)
chr8 (52-116)||(38588734-38588798)
chr8 (52-116)||(44594840-44594904)
chr8 (1-48)||(1432369-1432416)
chr8 (1-40)||(11707923-11707962)
chr8 (1-48)||(15048637-15048684)
chr8 (7-53)||(1870179-1870225)
chr8 (13-50)||(27669671-27669708)
chr8 (1-38)||(33295859-33295896)
chr8 (1-50)||(34470782-34470831)
chr8 (1-50)||(40048293-40048341)
chr8 (13-50)||(40660146-40660183)
chr8 (52-116)||(7949559-7949623)
chr8 (52-116)||(45077442-45077506)
chr8 (1-48)||(5152699-5152746)
chr8 (52-115)||(15871860-15871923)
chr8 (1-36)||(27473248-27473283)
chr8 (1-48)||(45276761-45276808)
chr8 (1-43)||(44594771-44594813)
chr8 (72-116)||(5435159-5435203)
chr8 (72-112)||(11708009-11708049)
chr8 (7-43)||(18298410-18298446)
chr8 (7-43)||(24659366-24659402)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-48)||(349311-349358)
scaffold0003 (52-110)||(113519-113577)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1-50)||(18511-18560)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-50)||(20988-21037)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-50)||(82021-82070)
[»] scaffold0221 (2 HSPs)
scaffold0221 (52-116)||(8575-8639)
scaffold0221 (1-48)||(8666-8713)
[»] scaffold0019 (2 HSPs)
scaffold0019 (52-116)||(50715-50779)
scaffold0019 (1-50)||(50639-50688)
[»] scaffold0072 (2 HSPs)
scaffold0072 (53-116)||(15595-15658)
scaffold0072 (1-50)||(15686-15735)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-43)||(72999-73041)
[»] scaffold0186 (1 HSPs)
scaffold0186 (1-42)||(24400-24441)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-48)||(14300-14347)
[»] scaffold0115 (1 HSPs)
scaffold0115 (72-116)||(21658-21702)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 52 - 319
Target Start/End: Original strand, 29199191 - 29199458
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaataattctaacgtgaaacgactgttatttagagacg 151  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29199191 ccttaacaaagcatagaattaaaatgatactaataaataatgttagaagatccacataatataaataattctaacgtgaaacgactgttatttagagacg 29199290  T
Q  152 gtgggactattttgatataattttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199291 gtgggactattttgatataattttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttc 29199390  T
Q  252 gcgggaaggacgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgctt 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29199391 gcgggaaggacgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgctt 29199458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29199164 - 29199110
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggtgcctt 55  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  29199164 tattgataactgttatgattcatatgtatgtgtgaaacaggagctcaggtacctt 29199110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36440412 - 36440365
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  36440412 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 36440365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34264560 - 34264511
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  34264560 tattggtaactgttatggttcatatgtatgtgtgaaacatgaggtcaggt 34264511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37424474 - 37424425
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  37424474 tattggtaactgttatggttcatatgtatctgtgaaacaggaggtcaggt 37424425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2183181 - 2183228
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| |||||||||||||| |||||||||||||||||||||| ||||    
T  2183181 tattggtaactgttatggtttatatgtatgtgtgaaacaggaggtcag 2183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 9989561 - 9989608
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  9989561 tattggtaattgttatggttcatatgtatgtgtgaaacaggaggtcag 9989608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 27186111 - 27186158
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  27186111 tattggtaattgttatggttcatatgtatgtgtgaaacaggaggtcag 27186158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16860632 - 16860594
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  16860632 tattggtaactgttatggttcatatgtatgtgtgaaaca 16860594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 16860515 - 16860468
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| |||||||||||||||||||| |||| ||||||||||| ||||    
T  16860515 tattggtaactgttatggttcatatgcatgtttgaaacaggaggtcag 16860468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 32288289 - 32288254
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  32288289 tattggtaactgttatggttcatatgtatgtgtgaa 32288254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11316192 - 11316230
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  11316192 tattggtaactgttatggttcatatgtatgtgtaaaaca 11316230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 116
Target Start/End: Complemental strand, 9989523 - 9989470
Alignment:
Q  63 catagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  9989523 cataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 9989470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24040297 - 24040248
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| |||| |||||||||||||||| ||||||||| ||||||    
T  24040297 tattggtaactattattgttcatatgtatgtgtaaaacaggaggtcaggt 24040248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 24040349 - 24040390
Alignment:
Q  75 atgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||||||||| ||||||||| |||||||| |||||    
T  24040349 atgatactaataaataaagttagaagacccacataacacaaa 24040390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 2183134 - 2183090
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  2183134 aaaatgatactaataaataaagttagaggacccacataacacaaa 2183090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 146; Significance: 8e-77; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 162 - 319
Target Start/End: Complemental strand, 12652603 - 12652447
Alignment:
Q  162 tttgatataattttgtgacgaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaagga 261  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652603 tttgatataattt-gtgacaaaagaaagttgatgtatttcattccataattaaatagaggaataaacacaatacacaatgcacttgtttcgcgggaagga 12652505  T
Q  262 cgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgctt 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12652504 cgattaacaaactatcttctccttccatccttccataactgaaaatcaaatcccgctt 12652447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19088553 - 19088504
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  19088553 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 19088504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38339730 - 38339779
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  38339730 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 38339779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 33091692 - 33091756
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  33091692 ccttaacaaagcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 33091756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 24898427 - 24898474
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  24898427 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 24898474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 50769059 - 50769106
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  50769059 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 50769106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33091665 - 33091623
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  33091665 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 33091623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 6505748 - 6505707
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  6505748 tattggtaactgttatggttcatatgtatgtgtgaaacagga 6505707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8592207 - 8592256
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  8592207 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 8592256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21763393 - 21763344
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  21763393 tattggtaactgttatggttcatatctatgtgtgaaacaggaggtcaggt 21763344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23755630 - 23755581
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  23755630 tattggtaattgttatggttcatatgtatgtgtgaaacaggaggtcaggt 23755581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37206639 - 37206590
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  37206639 tattggtaacttttatggttcatatgtatgtgtgaaacaggaggtcaggt 37206590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41878071 - 41878030
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  41878071 tattggtaactgttatggttcatatgtatgtgtgaaacagga 41878030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 46849881 - 46849832
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  46849881 tattggtaactgttatggttcatatgtatgtgtgaaacaggggttcaggt 46849832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50508669 - 50508620
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  50508669 tattggtaactgttatggttcatatgtatgtgcgaaacaggaggtcaggt 50508620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 50769032 - 50768968
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| ||||||||||| |||||    
T  50769032 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggatccacataacacaaa 50768968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 52557346 - 52557390
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| |||||||||||||||||    
T  52557346 aaaatgatactaataaataaagttagaggatccacataatacaaa 52557390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6712201 - 6712248
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  6712201 tattggtaaatgttatggttcatatgtatgtgtgaaacaggaggtcag 6712248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 19508619 - 19508576
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    |||||||||||||||| |||||||||||||||||||| ||||||    
T  19508619 taactgttatggttcacatgtatgtgtgaaacaggaggtcaggt 19508576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25182024 - 25181977
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  25182024 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcag 25181977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 44991490 - 44991451
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacag 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  44991490 tattggtaactgttatggttcatatgtatgtgtgaaacag 44991451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 53751114 - 53751067
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||    
T  53751114 tattggtaactgttatgattcatatgtatgtgtgaaacaggaggtcag 53751067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 23756039 - 23756097
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    |||||||||| ||||  || |||||||||||||||||||| |||||| |||||||||||    
T  23756039 ccttaacaaaacatatgaccaaaatgatactaataaataaagttagaggatccacataa 23756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 30683733 - 30683691
Alignment:
Q  8 aactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  30683733 aactgttatggttcatatgtatgtgtgaaacagaagatcaggt 30683691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 43566590 - 43566548
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  43566590 tattggtaactgttatggttcatatatatgtgtgaaacaggag 43566548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 623891 - 623842
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| ||||||    
T  623891 tattggtaactgttatggttcatatatatgtgtgaaataggaggtcaggt 623842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 14985569 - 14985618
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| |||||| |||||||||||||||||||||||| ||||||    
T  14985569 tattggtaactcttatggctcatatgtatgtgtgaaacaggaggtcaggt 14985618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15477857 - 15477808
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||| |||||||| || ||||||    
T  15477857 tattggtaactgttatggttcatatgtatgtatgaaacagaaggtcaggt 15477808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36122645 - 36122596
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| || ||| |||||||||||||||||||||||||||||| ||||||    
T  36122645 tattggtagctgatatggttcatatgtatgtgtgaaacaggagatcaggt 36122596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 37206666 - 37206731
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    ||||||||||| |||  || |||||||||||||||||||| |||||| || |||||||| ||||||    
T  37206666 ccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaat 37206731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 53259338 - 53259301
Alignment:
Q  13 ttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  53259338 ttatggttcatatgtatgtgtgaaacaggaggtcaggt 53259301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 14985540 - 14985484
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||| |||||| || |||||||||||||||||||| |||||| || ||||||||    
T  14985540 ttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataa 14985484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 30683767 - 30683831
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  30683767 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 30683831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 38339703 - 38339639
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  38339703 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 38339639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 44957580 - 44957536
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  44957580 aaaatgatactaataaataaagttagaggatccacataacacaaa 44957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 44991517 - 44991581
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  44991517 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaa 44991581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8398242 - 8398195
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||||||||| |||||||| ||||||||||||| |||||||| ||||    
T  8398242 tattgataactattatggtttatatgtatgtgtggaacaggaggtcag 8398195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42855551 - 42855504
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| |||||||| |||||||||| ||||||||||||||||| ||||    
T  42855551 tattggtaactgttgtggttcatatatatgtgtgaaacaggaggtcag 42855504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 43734527 - 43734590
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    ||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| ||||||    
T  43734527 ttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaat 43734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16038006 - 16037964
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||    
T  16038006 tattggtaattgttatggttcatatgtatgtgtgaaataggag 16037964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39448700 - 39448662
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  39448700 tattggtaactcttatggttcatatgtatgtgtgaaaca 39448662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44957627 - 44957661
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtga 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  44957627 tattggtaactgttatggttcatatgtatgtgtga 44957661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 1433513 - 1433574
Alignment:
Q  55 taacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  1433513 taacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaa 1433574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 41752028 - 41751987
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||    
T  41752028 tattggtaactgttatgattcatatgtatttgtgaaacagga 41751987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 43566617 - 43566682
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    |||||||||  ||||| || |||||||||||||||||||| ||| || || |||||||| ||||||    
T  43566617 ccttaacaagacataggaccaaaatgatactaataaataaagtttgaggacccacataacacaaat 43566682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 43734492 - 43734451
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    |||||||||||||| |||||||||||||||| ||||| ||||    
T  43734492 taactgttatggtttatatgtatgtgtgaaataggagatcag 43734451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 53751141 - 53751206
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    ||||||||| |||||  || ||||| |||||||||||||| |||||| || |||||||| ||||||    
T  53751141 ccttaacaaggcataagaccaaaattatactaataaataaagttagaggacccacataacacaaat 53751206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 623938 - 623982
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||| ||||||||||| |||||| ||||||||||| |||||    
T  623938 aaaatgatgctaataaataaagttagaggatccacataacacaaa 623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1433483 - 1433447
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaa 37  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  1433483 tattggtaactattatggttcatatgtatgtgtgaaa 1433447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 8592180 - 8592116
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  8592180 ccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 8592116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 16038033 - 16038097
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  16038033 ccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 16038097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 19088600 - 19088644
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  19088600 aaaatgatactaataaataaagttagaggacccacataacacaaa 19088644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 19508652 - 19508716
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || ||||| |||||||||||||| |||||| || |||||||| |||||    
T  19508652 ccttaacaaggcatatgaccaaaatcatactaataaataaagttagaggacccacataacacaaa 19508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 21763440 - 21763484
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  21763440 aaaatgatactaataaataaagttagaggacccacataacacaaa 21763484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 23755659 - 23755703
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    |||||||||||||  || |||||||||||||||||||| ||||||    
T  23755659 ttaacaaagcatatgaccaaaatgatactaataaataaagttaga 23755703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 42855598 - 42855642
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  42855598 aaaatgatactaataaataaagttagaggacccacataacacaaa 42855642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 46849928 - 46849972
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  46849928 aaaatgatactaataaataaagttagaggacccacataacacaaa 46849972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 53259377 - 53259441
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| ||  ||||||| |||||    
T  53259377 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggactcacataacacaaa 53259441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 53995146 - 53995110
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaa 37  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  53995146 tattggtaactgatatggttcatatgtatgtgtgaaa 53995110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 18053167 - 18053103
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||| |||||    
T  18053167 ccttaacaaagcatagaaccaaaatgatactaataaataaagttagaggacccacataacacaaa 18053103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 7270193 - 7270240
Alignment:
Q  3 ttgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7270193 ttgataactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 7270240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21856767 - 21856718
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  21856767 tattgataactgttatggttcatatgtatgtgtgaaataggaggtcaggt 21856718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 5938052 - 5938116
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||| || |||||||| |||||    
T  5938052 ccttaacaaggcatagaaccaaaatgatactaataaataaagttagaggacccacataacacaaa 5938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6236133 - 6236086
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  6236133 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 6236086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 35167696 - 35167653
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  35167696 taactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 35167653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7270867 - 7270909
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  7270867 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 7270909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 3423382 - 3423333
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  3423382 tattggtaactgttatggttcatatgtatgtgttaaacaggaggtcaggt 3423333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 5311064 - 5311113
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  5311064 tattggtaactattatggttcatatgtatgtgtgaaacaggaggtcaggt 5311113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5938025 - 5937976
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||||    
T  5938025 tattggtaactattatggttcatatgtatgtgtgaaacaggaggtcaggt 5937976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9046324 - 9046373
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  9046324 tattggtaactgttatgattcatatgtatgtgtgaaacaggaggtcaggt 9046373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 32993254 - 32993318
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || ||||||||||||||    
T  32993254 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataatacaaa 32993318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32993227 - 32993189
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  32993227 tattggtaactgttatggttcatatgtatgtgtgaaaca 32993189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34994592 - 34994554
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  34994592 tattggtaactgttatggttcatatgtatgtgtgaaaca 34994554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 26957200 - 26957249
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||| ||||||    
T  26957200 tattggtaagtgttatgattcatatgtatgtgtgaaacaggaggtcaggt 26957249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31237984 - 31238025
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| |||||||||||||||||||||||||| |||||||||    
T  31237984 tattgttaactgttatggttcatatgtatgtgagaaacagga 31238025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31247354 - 31247395
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||| ||||||||||||||||||||||||||||||    
T  31247354 tattggtaactattatggttcatatgtatgtgtgaaacagga 31247395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32753411 - 32753460
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||| ||||||    
T  32753411 tattggtaagtgttatgattcatatgtatgtgtgaaacaggaggtcaggt 32753460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 7270840 - 7270776
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  7270840 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 7270776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 35167731 - 35167795
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |  ||| ||||||||||||||||||||||| |||||| || |||||||| |||||    
T  35167731 ccttaacaaggattaggactaaaatgatactaataaataaagttagaggacccacataacacaaa 35167795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 25176869 - 25176834
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  25176869 tattggtaactgttatggttcatatgtatgtgtgaa 25176834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5639385 - 5639343
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||    
T  5639385 tattggtaattgttatggttcatatgtatgtgtgaaataggag 5639343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 7270162 - 7270100
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  7270162 ttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 7270100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 34890853 - 34890791
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  34890853 ttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 34890791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 2517250 - 2517287
Alignment:
Q  11 tgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  2517250 tgttatggttcatatgtatgtgtgaaacaagaggtcag 2517287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 3423409 - 3423466
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacata 109  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||    
T  3423409 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacata 3423466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 21540217 - 21540274
Alignment:
Q  53 cttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    |||||||| |||||| |  |||||||||||||||||||| |||||| || ||||||||    
T  21540217 cttaacaaggcataggatcaaaatgatactaataaataaagttagaggacccacataa 21540274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34890882 - 34890931
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||||||||| |||||||||||| || ||||||    
T  34890882 tattggtaactgttatgattcatatgtgtgtgtgaaacagaaggtcaggt 34890931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 5311017 - 5310973
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  5311017 aaaatgatactaataaataaagttagaggacccacataacacaaa 5310973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 6137637 - 6137681
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  6137637 aaaatgatactaataaataaagttagaggacccacataacacaaa 6137681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 24744519 - 24744475
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  24744519 aaaatgatactaataaataaagttagaggacccacataacacaaa 24744475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 26600548 - 26600504
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  26600548 aaaatgatactaataaataaagttagaggacccacataacacaaa 26600504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 47669497 - 47669549
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggtgcc 53  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  47669497 tattgataactgttatggttcatatgtgtgtgtgaaacaggaggtcaggtgcc 47669549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1994381 - 1994332
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1994381 tattgataactgttatggttcatatgtatgtgtgaaataggaggtcaggt 1994332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 39241596 - 39241645
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  39241596 tattgataattgttatggttcatatgtatgtgtgaaacaggaggtcaggt 39241645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53716531 - 53716580
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  53716531 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 53716580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 54108114 - 54108065
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  54108114 tattggtaactgttatggttcataggtatgtgtgaaacaggagctcaggt 54108065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 54752401 - 54752450
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  54752401 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 54752450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8474058 - 8474011
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  8474058 tattgataactgttatggttcatatgtatgtgtgaaacaagaggtcag 8474011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12203763 - 12203716
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12203763 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 12203716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 39951595 - 39951642
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  39951595 tattgataactgttatggttcatatatatgtgtgaaacaggaggtcag 39951642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 1999537 - 1999491
Alignment:
Q  4 tgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  1999537 tgataactgttatggttcatatgtatgtgtgaaataggaggtcaggt 1999491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 29818415 - 29818457
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  29818415 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 29818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 39664423 - 39664481
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||| || ||||||||    
T  39664423 ccttaacaaggcatagaaccaaaatgatactaataaataaagttagaggacccacataa 39664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41835138 - 41835096
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  41835138 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 41835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 32633277 - 32633228
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  32633277 tattggtaactgttatgattcatatgtatgtgtgaaacaggaggtcaggt 32633228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11256341 - 11256393
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggtgcc 53  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  11256341 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaagtgcc 11256393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 19883479 - 19883527
Alignment:
Q  2 attgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  19883479 attggtaaatgttatggttcatatgtatgtgtgaaacaggaggtcaggt 19883527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 27801698 - 27801642
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||| ||||||||| ||||||||| |||||||||| |||||| |||||||||||    
T  27801698 ttaacaaggcatagaaccaaaatgatattaataaataaagttagaggatccacataa 27801642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 4757706 - 4757659
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  4757706 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcag 4757659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 16931844 - 16931891
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| || |||||||||||||||||||||||||||||||||| ||||    
T  16931844 tattggtagctgttatggttcatatgtatgtgtgaaacaggaggtcag 16931891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 28986372 - 28986325
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  28986372 tattggtaactgttatggttcatatgtatgtgtgaaagaggaggtcag 28986325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 42592022 - 42592069
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  42592022 tattggtaactgttatggttcatatgtatgtgtgaaagaggaggtcag 42592069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26318394 - 26318356
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  26318394 tattggtaactgttatggttcatatgtatgtgtgaaaca 26318356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10506160 - 10506111
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||| ||||||    
T  10506160 tattggtaattgttatggttcatatgtatatgtgaaacaggaggtcaggt 10506111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15986472 - 15986521
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||| ||||||    
T  15986472 tattggtaactattatggttcatatgtatgtgtgatacaggaggtcaggt 15986521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 24428805 - 24428854
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  24428805 tattggtaactattatgcttcatatgtatgtgtgaaacaggaggtcaggt 24428854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27801727 - 27801776
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||| ||||||||||||||||||||||||||| || || ||||||    
T  27801727 tattgataattgttatggttcatatgtatgtgtgaaatagaaggtcaggt 27801776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 8474085 - 8474149
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||| |||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  8474085 ccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 8474149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 10506187 - 10506251
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  10506187 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 10506251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 22152056 - 22151992
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  22152056 ccttaacaatgaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 22151992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 26318421 - 26318485
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||| |||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  26318421 ccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 26318485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 51509378 - 51509422
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || ||||||||||||||    
T  51509378 aaaatgatactaataaataaagttagaggacccacataatacaaa 51509422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 54752374 - 54752310
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||| |||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  54752374 ccttaacaaagaatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 54752310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 11 - 50
Target Start/End: Complemental strand, 5900625 - 5900586
Alignment:
Q  11 tgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||| ||||| ||||||    
T  5900625 tgttatggttcatatgtatgtgtgaaataggaggtcaggt 5900586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 22152083 - 22152122
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacag 40  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  22152083 tattggtaactattatggttcatatgtatgtgtgaaacag 22152122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47303231 - 47303184
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||| ||||    
T  47303231 tattggtaactgttatgattcatatgtatatgtgaaacaggaggtcag 47303184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 51509331 - 51509284
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| |||||||||||||||||||||| |||||||| ||||| ||||    
T  51509331 tattggtaactgttatggttcatatgtacgtgtgaaataggaggtcag 51509284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 11256314 - 11256268
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttaga 98  Q
    ||||||||| |||||| || |||||||||||||||||||| ||||||    
T  11256314 ccttaacaaggcataggaccaaaatgatactaataaataaagttaga 11256268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 44893979 - 44894025
Alignment:
Q  2 attgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    |||| ||| ||||||||||||||||||||||||||| ||||| ||||    
T  44893979 attggtaattgttatggttcatatgtatgtgtgaaataggaggtcag 44894025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18464694 - 18464743
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||| ||||||| |||||||||| || ||||||    
T  18464694 tattggtaactgttatggttcctatgtatatgtgaaacagaaggtcaggt 18464743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21969867 - 21969916
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||||||||||||||||||||||| || || ||||||    
T  21969867 tattggtaactattatggttcatatgtatgtgtgaaatagaaggtcaggt 21969916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21992303 - 21992352
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||| ||||||||||||||||||||||||| || || ||||||    
T  21992303 tattggtaactattatggttcatatgtatgtgtgaaatagaaggtcaggt 21992352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22201854 - 22201895
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||| ||||||||||||||||||| ||||||||||    
T  22201854 tattggtaactattatggttcatatgtatgtatgaaacagga 22201895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 24428758 - 24428713
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    |||||||||||||||||| | |||||| ||||||||||| ||||||    
T  24428758 aaaatgatactaataaattaagttagaggatccacataacacaaat 24428713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 4757744 - 4757796
Alignment:
Q  64 atagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||| |||||||| ||||||||||| |||||| || |||||||| |||||    
T  4757744 atagaaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 4757796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 5900662 - 5900726
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  5900662 ccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 5900726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 12203790 - 12203854
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||| ||||  || |||||||||||||||||||| |||||| |  |||||||| |||||    
T  12203790 ccttaacaaaacatattaccaaaatgatactaataaataaagttagaggtcccacataacacaaa 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 16931797 - 16931753
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  16931797 aaaatgatactaataaataaagttagaggacccacataacacaaa 16931753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 22201827 - 22201763
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| ||  ||||||| |||||    
T  22201827 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggactcacataacacaaa 22201763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 29818368 - 29818324
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| |||||| |||| |||||    
T  29818368 aaaatgatactaataaataaagttagaggatccatataacacaaa 29818324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 32633324 - 32633368
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  32633324 aaaatgatactaataaataaagttagaggacccacataacacaaa 32633368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 39241549 - 39241505
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  39241549 aaaatgatactaataaataaagttagaggacccacataacacaaa 39241505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 42591975 - 42591931
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  42591975 aaaatgatactaataaataaagttagaggacccacataacacaaa 42591931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 44893931 - 44893887
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  44893931 aaaatgatactaataaataaagttagaggacccacataacacaaa 44893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 47669450 - 47669406
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  47669450 aaaatgatactaataaataaagttagaggacccacataacacaaa 47669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 54108161 - 54108205
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  54108161 aaaatgatactaataaataaagttagaggacccacataacacaaa 54108205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19946 - 19995
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  19946 tattgataactgttatggttcatatgtatgtgtgaaataggaggtcaggt 19995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 19899 - 19855
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||| ||||||||||| |||||| || ||||||||||||||    
T  19899 aaaatgatgctaataaataaagttagaggacccacataatacaaa 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6357003 - 6357052
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6357003 tattgataactgttatggttcatatgtatgtgtgaaagaggaggtcaggt 6357052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 36423613 - 36423656
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  36423613 taactgttatggttcatatgtatgtgtgaaacaggagatcaggt 36423656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19681707 - 19681665
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  19681707 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 19681665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7579084 - 7579035
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| ||||||    
T  7579084 tattggtaactgttatggttcatatgtatgtgtaaaacaggaggtcaggt 7579035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8937061 - 8937012
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||    
T  8937061 tattggtaactgttttggttcatatgtatgtgtgaaacaggaggtcaggt 8937012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21391402 - 21391353
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| ||||||    
T  21391402 tattggtaactgttatggttcatatatatgtgtgaaacaggaggtcaggt 21391353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31638155 - 31638106
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  31638155 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 31638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 41453217 - 41453168
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  41453217 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 41453168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 44332731 - 44332682
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  44332731 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 44332682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 6356976 - 6356912
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | ||||||| |||||||||||||||||||| |||||| || |||||||| |||||    
T  6356976 ccttaacaaggaatagaaccaaaatgatactaataaataaagttagaggacccacataacacaaa 6356912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 33716799 - 33716735
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||  ||||| || |||||||||||||||||||| |||||| || ||||||||||||||    
T  33716799 ccttaacaagacataggaccaaaatgatactaataaataaagttagaggacccacataatacaaa 33716735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 41751860 - 41751797
Alignment:
Q  53 cttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||  ||||| || ||||| |||||||||||||| |||||||||||||||||| |||||    
T  41751860 cttaacaagacataggaccaaaataatactaataaataaagttagaagatccacataacacaaa 41751797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 43247659 - 43247702
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    |||||| |||||||||||||||||||||||||||||| ||||||    
T  43247659 taactggtatggttcatatgtatgtgtgaaacaggaggtcaggt 43247702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 48626275 - 48626228
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  48626275 tattggtaactgttatggttcatatgtatgtgtgaaacaagaggtcag 48626228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41751888 - 41751930
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| ||||||||||| |||||||||||||||||||||||||    
T  41751888 tattggtaactgttatgattcatatgtatgtgtgaaacaggag 41751930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 44332758 - 44332816
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| || ||||||||    
T  44332758 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataa 44332816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 1114283 - 1114332
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||| ||||||    
T  1114283 tattggtaactgttatggttcatatatatgtgtgaaataggaggtcaggt 1114332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 48
Target Start/End: Original strand, 8542743 - 8542784
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  8542743 taactgttatggttcatatgtatgtgtgaaataggaggtcag 8542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 21391449 - 21391493
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  21391449 aaaatgatactaataaataaagttagatgatccacataacacaaa 21391493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 31638182 - 31638238
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacat 108  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| |||||||||    
T  31638182 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggatccacat 31638238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 34037117 - 34037074
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||    
T  34037117 taactgttatgattcatatgtatgtgtaaaacaggaggtcaggt 34037074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 35146910 - 35146871
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacag 40  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  35146910 tattggtaactgttatggttcatatgtaagtgtgaaacag 35146871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40673219 - 40673172
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||| ||||||| ||||||||||||||||||||||||| ||||    
T  40673219 tattggtaagtgttatgattcatatgtatgtgtgaaacaggaggtcag 40673172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41191894 - 41191847
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||| ||||    
T  41191894 tattggtaactattatggttcatatgtatgtgtgaaacatgaggtcag 41191847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17750147 - 17750109
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||||||||| |||| ||||||||||||||||||||||    
T  17750147 tattgataacttttatagttcatatgtatgtgtgaaaca 17750109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28298057 - 28298099
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    |||| |||||| ||||||||||||||||| |||||||||||||    
T  28298057 tattaataacttttatggttcatatgtatctgtgaaacaggag 28298099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 43247626 - 43247568
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || ||||||||    
T  43247626 ccttaacaatgcataagaccaaaatgatactaataaataaagttagaggacccacataa 43247568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 36423560 - 36423515
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  36423560 aaaatgatactaataaataaagttagaggacccacataacacaaat 36423515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 48626322 - 48626367
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  48626322 aaaatgatactaataaataaagttagaggacccacataacacaaat 48626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 10526502 - 10526458
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  10526502 aaaatgatactaataaataaagttagaggacccacataacacaaa 10526458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 17359372 - 17359328
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  17359372 aaaatgatactaataaataaagttagaggacccacataacacaaa 17359328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 19681754 - 19681798
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  19681754 aaaatgatactaataaataaagttagaggacccacataacacaaa 19681798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 28286322 - 28286282
Alignment:
Q  8 aactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  28286322 aactgtaatggttcatatctatgtgtgaaacaggaggtcag 28286282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 28286376 - 28286420
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  28286376 aaaatgatactaataaataaagttagaggacccacataacacaaa 28286420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 28298010 - 28297966
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  28298010 aaaatgatactaataaataaagttagaggacccacataacacaaa 28297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 41191944 - 41191988
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  41191944 aaaatgatactaataaataaagttagaggacccacataacacaaa 41191988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 41453244 - 41453308
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  41453244 ccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 41453308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 16305263 - 16305312
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  16305263 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 16305312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 34735554 - 34735513
Alignment:
Q  2 attgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34735554 attgataactgttatggttcatatgtatgtgtgaaacaggag 34735513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 15405968 - 15405921
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15405968 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 15405921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 36713823 - 36713870
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  36713823 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 36713870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41474320 - 41474367
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  41474320 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 41474367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 17052296 - 17052334
Alignment:
Q  5 gataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17052296 gataactgttatggttcatatgtatgtgtgaaacaggag 17052334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2148098 - 2148049
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  2148098 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 2148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 8174097 - 8174048
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| ||||||    
T  8174097 tattggtaattgttatggttcatatgtatgtgtgaaacaggaggtcaggt 8174048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13193226 - 13193275
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  13193226 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 13193275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15744695 - 15744744
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  15744695 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 15744744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 48
Target Start/End: Complemental strand, 26181906 - 26181865
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  26181906 taactgttatggttcatatgtatgtgtgaaacaggagatcag 26181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7496192 - 7496145
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  7496192 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcag 7496145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10992089 - 10992136
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  10992089 tattggtaactcttatggttcatatgtatgtgtgaaacaggaggtcag 10992136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19815916 - 19815869
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  19815916 tattggtaactgttatggttcatatgtatgtgtgaaacaagaggtcag 19815869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 24138746 - 24138809
Alignment:
Q  53 cttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  24138746 cttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 24138809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 38332914 - 38332851
Alignment:
Q  53 cttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  38332914 cttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataaaacaaa 38332851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 24138280 - 24138238
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  24138280 tattggtaactgttatggctcatatgtatgtgtgaaacaggag 24138238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19847531 - 19847490
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  19847531 tattggtaactgttatggttcatatgtatgtgtgaaatagga 19847490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29472480 - 29472529
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| ||||||    
T  29472480 tattggtaattgttatagttcatatgtatgtgtgaaacaggaggtcaggt 29472529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 26181939 - 26182003
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  26181939 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 26182003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 34735582 - 34735646
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  34735582 ccttaacaaggaataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 34735646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 41474293 - 41474229
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||| |  |||||||||||||||||||| |||||| || |||||||| |||||    
T  41474293 ccttaacaaggcataggatcaaaatgatactaataaataaagttagatgacccacataacacaaa 41474229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7469404 - 7469451
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| |||| |||||||||||||||||||||||||| ||||| ||||    
T  7469404 tattgttaaccgttatggttcatatgtatgtgtgaaagaggaggtcag 7469451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24372179 - 24372140
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacag 40  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  24372179 tattggtaactgttttggttcatatgtatgtgtgaaacag 24372140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 12860580 - 12860543
Alignment:
Q  13 ttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  12860580 ttatggttcatatgtatgtgtgaaataggaggtcaggt 12860543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 117
Target Start/End: Original strand, 24372226 - 24372271
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    |||||||||||||||||||| |||||| || |||||||| ||||||    
T  24372226 aaaatgatactaataaataaagttagaggacccacataacacaaat 24372271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 36713797 - 36713735
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| ||||||||| |||||||  ||||||||||| |||||| || |||||||| |||||    
T  36713797 ccttaacaaggcatagaaccaaaatga--ctaataaataaagttagaggacccacataacacaaa 36713735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 7469377 - 7469313
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||||||| ||||||| |||||| || |||||||| |||||    
T  7469377 ccttaacaaggaataggaccaaaatgatactagtaaataaagttagaggacccacataacacaaa 7469313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 8174144 - 8174188
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  8174144 aaaatgatactaataaataaagttagaggacccacataacacaaa 8174188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 12860606 - 12860670
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  12860606 ccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 12860670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 13193199 - 13193135
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || | |||||| |||||    
T  13193199 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggaccaacataacacaaa 13193135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 16305216 - 16305172
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  16305216 aaaatgatactaataaataaagttagaggacccacataacacaaa 16305172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 17052249 - 17052205
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  17052249 aaaatgatactaataaataaagttagaggacccacataacacaaa 17052205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 29472453 - 29472389
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| ||  ||||||| |||||    
T  29472453 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggactcacataacacaaa 29472389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23476553 - 23476504
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  23476553 tattgataattgttatggttcatatgtatgtgtgaaacaggaggtcaggt 23476504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 25995995 - 25995930
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| ||||||||||| ||||||    
T  25995995 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggatccacataacacaaat 25995930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 37284940 - 37284891
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  37284940 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 37284891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16024135 - 16024183
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcagg 49  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  16024135 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcagg 16024183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37304266 - 37304313
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  37304266 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 37304313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1762886 - 1762844
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  1762886 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 1762844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 9006432 - 9006494
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||| |||||| || |||||||||||||||||||| |||||| || ||||||||||||||    
T  9006432 ttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataatacaaa 9006494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 44322898 - 44322940
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  44322898 tattggtaactgttatggttcatatgtatgtgtgaaacaggag 44322940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9006403 - 9006354
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| |||||||||| |||||||||||||||||||||||||| ||||||    
T  9006403 tattggtaactgttatagttcatatgtatgtgtgaaacaggaggtcaggt 9006354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 27547881 - 27547832
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  27547881 tattggtaactgttatggttcatatgtatgtgtgaaacaagaggtcaggt 27547832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 49140355 - 49140306
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||||||    
T  49140355 tattggtaactgttatgattcatatgtatgtgtgaaacaggaggtcaggt 49140306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6798019 - 6797971
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcagg 49  Q
    ||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  6798019 tattggtaattgttatggttcatatgtatgtgtgaaacaggaggtcagg 6797971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 45052928 - 45052992
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  45052928 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 45052992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 12481271 - 12481224
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  12481271 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcag 12481224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 26707408 - 26707361
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||    
T  26707408 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcag 26707361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27400636 - 27400597
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacag 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  27400636 tattggtaactgttatggttcatatgtatgtgtgaaacag 27400597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 27547910 - 27547965
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacata 109  Q
    |||||||||||||| || |||||||||||||||||||| |||||| || |||||||    
T  27547910 ttaacaaagcatagtaccaaaatgatactaataaataaagttagaggacccacata 27547965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 37585899 - 37585856
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||    
T  37585899 taactgttatggttcatatgtatgtgtgaaacatgaggtcaggt 37585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2064423 - 2064385
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  2064423 tattggtaactgttatggttcatatgtatgtgtgaaaca 2064385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 8762611 - 8762561
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggtg 51  Q
    ||||| ||| |||||| |||||||||||||||||||||||||| |||||||    
T  8762611 tattggtaaatgttatagttcatatgtatgtgtgaaacaggaggtcaggtg 8762561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20306240 - 20306278
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  20306240 tattggtaactgttatggttcatatgtatgtgtgaaaca 20306278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 27400665 - 27400727
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||| |||||  ||||||||||||||||||||||| |||||| || |||||||| |||||    
T  27400665 ttaacaaggcataagactaaaatgatactaataaataaagttagaggacccacataacacaaa 27400727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 4330095 - 4330140
Alignment:
Q  71 taaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||||||||||||||| ||||||||| |||||||| |||||    
T  4330095 taaaatgatactaataaataaagttagaagacccacataacacaaa 4330140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4697094 - 4697045
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||| ||||||    
T  4697094 tattggtaactgttatgattcatatgtatgtgtgaaataggaggtcaggt 4697045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 37576419 - 37576468
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||||||||||||||||||||||| | ||||||    
T  37576419 tattggtaactgttatgattcatatgtatgtgtgaaacagggggtcaggt 37576468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 31703825 - 31703761
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | ||||||| |||||||| ||||||||||| |||||| || |||||||| |||||    
T  31703825 ccttaacaaggaatagaaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 31703761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 37284967 - 37285031
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  37284967 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 37285031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 49140382 - 49140446
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | ||| ||| |||||||||||||||||||| |||||| || |||||||| |||||    
T  49140382 ccttaacaaggaatataaccaaaatgatactaataaataaagttagaggacccacataacacaaa 49140446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25996022 - 25996069
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||| ||||    
T  25996022 tattggtaactgttatgattcatatgtatgtgtgaaataggaggtcag 25996069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 39486408 - 39486365
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||    
T  39486408 taactattatggttcatatatatgtgtgaaacaggaggtcaggt 39486365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 44322871 - 44322816
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccaca 107  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| || |||||    
T  44322871 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccaca 44322816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 1762915 - 1762977
Alignment:
Q  54 ttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  1762915 ttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacataacacaaa 1762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3089580 - 3089618
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||||||||||||||| ||||||||||| |||||||||    
T  3089580 tattgataactgttatgattcatatgtatatgtgaaaca 3089618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45052901 - 45052863
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaaca 39  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  45052901 tattggtaactgttatggtttatatgtatgtgtgaaaca 45052863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 49643883 - 49643841
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| |||||| |||||||||||||||||| |||||||||||    
T  49643883 tattggtaactgctatggttcatatgtatgtatgaaacaggag 49643841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 20306213 - 20306148
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaat 117  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| ||  ||||||| ||||||    
T  20306213 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggactcacataacacaaat 20306148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31703852 - 31703900
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| |||||||||||||||| |||||||||||||| ||||| ||||||    
T  31703852 tattggtaactgttatggttca-atgtatgtgtgaaataggaggtcaggt 31703900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 2064470 - 2064514
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  2064470 aaaatgatactaataaataaagttagaggacccacataacacaaa 2064514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 3089533 - 3089489
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||    
T  3089533 aaaatgatactaataaataaagttataggatccacataacacaaa 3089489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 12127312 - 12127356
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  12127312 aaaatgatactaataaataaagttagaggacccacataacacaaa 12127356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 12481298 - 12481362
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || |||||||| ||||||||||| |||||| || |||||||| |||||    
T  12481298 ccttaacaaggaataggaccaaaatgatgctaataaataaagttagaggacccacataacacaaa 12481362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23476580 - 23476644
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||  ||||| || |||||||||||||||||||| |||||| ||  ||||||| |||||    
T  23476580 ccttaacaagacataggaccaaaatgatactaataaataaagttagaggactcacataacacaaa 23476644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 26707435 - 26707491
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacat 108  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || ||||||    
T  26707435 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggacccacat 26707491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 37304239 - 37304175
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || || ||||| |||||    
T  37304239 ccttaacaaggcatatgaccaaaatgatactaataaataaagttagaggaccctcataacacaaa 37304175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 37576392 - 37576328
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| | |||| || ||||||||||| |||||||| |||||| || |||||||| |||||    
T  37576392 ccttaacaaggaataggaccaaaatgatacttataaataaagttagaggacccacataacacaaa 37576328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 38127900 - 38127856
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  38127900 aaaatgatactaataaataaagttagaggacccacataaaacaaa 38127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 49643910 - 49643974
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||| |  |||||||||||||||||||| ||||||  | |||||||| |||||    
T  49643910 ccttaacaaggcataggatcaaaatgatactaataaataaagttagagaacccacataacacaaa 49643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 37569525 - 37569477
Alignment:
Q  2 attgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  37569525 attggtaactgttatggttcatatgtatgtgtgaaacaggaggtcaggt 37569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5435112 - 5435065
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  5435112 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 5435065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 11173873 - 11173932
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataat 111  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||| || |||||||||    
T  11173873 ccttaacaaagcatagaacccaaatgatactaataaataaagttagaggacccacataat 11173932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15871833 - 15871784
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  15871833 tattggtaactgttatggttcatgtgtatgtgtgaaacaggaggtcaggt 15871784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38588825 - 38588874
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||||    
T  38588825 tattggtaactgttatggttcatatgtatgtgtgaaacaagaggtcaggt 38588874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 7535039 - 7535003
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    |||||||||||||||||||||||||||||||||||||    
T  7535039 taactgttatggttcatatgtatgtgtgaaacaggag 7535003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 38588798 - 38588734
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  38588798 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 38588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 44594840 - 44594904
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||  |||||||| ||||| |||||||||||||| |||||| ||||||||||| |||||    
T  44594840 ccttaacaagacatagaaccaaaataatactaataaataaagttagaggatccacataacacaaa 44594904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1432369 - 1432416
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  1432369 tattggtaactgttatggttcatatgtacgtgtgaaacaggaggtcag 1432416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 11707962 - 11707923
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacag 40  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  11707962 tattggtaactgttatggttcatatgtatgtgtgaaacag 11707923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 15048637 - 15048684
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  15048637 tattggtaactgttatggttcatatgtatgtgtgaaacaagaggtcag 15048684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 1870179 - 1870225
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggagctcaggtgcc 53  Q
    |||| |||||||||||||||||||||||||||||||| || ||||||    
T  1870179 taaccgttatggttcatatgtatgtgtgaaacaggaggtctggtgcc 1870225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 27669671 - 27669708
Alignment:
Q  13 ttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  27669671 ttatggttcatatgtatgtgtgaaacaggaggtcaggt 27669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33295896 - 33295859
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaac 38  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  33295896 tattgataactgttatgattcatatgtatgtgtgaaac 33295859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34470782 - 34470831
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||| ||| |||||||||||||||||||| |||||||    
T  34470782 tattggtaactgttatgattcttatgtatgtgtgaaacaggaactcaggt 34470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40048293 - 40048341
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    |||||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  40048293 tattgataaccgttatggttcat-tgtatgtgtgaaacaggaggtcaggt 40048341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 40660183 - 40660146
Alignment:
Q  13 ttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  40660183 ttatggttcatatgtatgtgtgaaacaggaggtcaggt 40660146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 7949623 - 7949559
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  7949623 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaa 7949559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 45077442 - 45077506
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||  || |||||||||||||||||||| |||||| || |||||||| |||||    
T  45077442 ccttaacaaggcataagaccaaaatgatactaataaataaagttagaggacccacataacacaaa 45077506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5152746 - 5152699
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||| | ||||||||||| ||||    
T  5152746 tattggtaactgttatggttcatatgtatatatgaaacaggaggtcag 5152699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 15871860 - 15871923
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaa 115  Q
    |||||||||  ||||| || |||||||||||||||||||| |||||| || |||||||| ||||    
T  15871860 ccttaacaagacataggaccaaaatgatactaataaataaagttagaggacccacataacacaa 15871923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 27473283 - 27473248
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaa 36  Q
    ||||| ||||||||||||||||||||||||||||||    
T  27473283 tattggtaactgttatggttcatatgtatgtgtgaa 27473248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45276808 - 45276761
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||| |||||||||||||||||||||| |||||||| ||||    
T  45276808 tattggtaactattatggttcatatgtatgtgtggaacaggaggtcag 45276761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44594813 - 44594771
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||    
T  44594813 tattggtaactgttatggttcatatatatgtgtgaaataggag 44594771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 5435159 - 5435203
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  5435159 aaaatgatactaataaataaagttagatgacccacataacacaaa 5435203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 11708009 - 11708049
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataata 112  Q
    |||||||||||||||||||| |||||| || ||||||||||    
T  11708009 aaaatgatactaataaataaagttagatgacccacataata 11708049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 18298446 - 18298410
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  18298446 taactgttatgattcatatgtatgtgtgaaataggag 18298410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 24659402 - 24659366
Alignment:
Q  7 taactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  24659402 taactgttatagttaatatgtatgtgtgaaacaggag 24659366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 349311 - 349358
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  349311 tattggtaactgttatggttcatatgtatgtgtgaaacaggaggtcag 349358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 113577 - 113519
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataa 110  Q
    ||||||||| ||||||||| |||||||||||||||||||| |||||| || ||||||||    
T  113577 ccttaacaaggcatagaaccaaaatgatactaataaataaagttagaggagccacataa 113519  T

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Target: scaffold0340 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18511 - 18560
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||||||| | ||||||    
T  18511 tattggtaactgttatggttcatatgtatgtgtgaaacaggcggtcaggt 18560  T

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Target: scaffold0220 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 20988 - 21037
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||||||||||| ||||| ||||||    
T  20988 tattggtaactgttatggttcatatgtatgtgtgaaataggaggtcaggt 21037  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 82070 - 82021
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||||    
T  82070 tattggtaactgttatggttcatatgtatctgtgaaacaggaggtcaggt 82021  T

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Target: scaffold0221 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 8639 - 8575
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  8639 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 8575  T

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Target: scaffold0221; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8666 - 8713
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  8666 tattggtaactgttatggttcatgtgtatgtgtgaaacaggaggtcag 8713  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 50715 - 50779
Alignment:
Q  52 ccttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    ||||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  50715 ccttaacaaggcataggaccaaaatgatactaataaataaagttagaggacccacataacacaaa 50779  T

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Target: scaffold0019; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 50688 - 50639
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||| ||||||    
T  50688 tattggtaactgttatggttcttatgtatgtgtgaaagaggaggtcaggt 50639  T

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Target: scaffold0072 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 15658 - 15595
Alignment:
Q  53 cttaacaaagcatagaactaaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||| |||||| || |||||||||||||||||||| |||||| || |||||||| |||||    
T  15658 cttaacaaggcataggacaaaaatgatactaataaataaagttagaggacccacataacacaaa 15595  T

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Target: scaffold0072; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15686 - 15735
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcaggt 50  Q
    ||||| ||||||||||||||| ||||||| ||||||||||||| ||||||    
T  15686 tattggtaactgttatggttcgtatgtatatgtgaaacaggaggtcaggt 15735  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 72999 - 73041
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggag 43  Q
    ||||| ||||||||||||||||||||||||||||||| |||||    
T  72999 tattggtaactgttatggttcatatgtatgtgtgaaataggag 73041  T

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Target: scaffold0186 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24400 - 24441
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacagga 42  Q
    ||||| ||||||||||||||||||||||||||||||| ||||    
T  24400 tattggtaactgttatggttcatatgtatgtgtgaaatagga 24441  T

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Target: scaffold0134 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14347 - 14300
Alignment:
Q  1 tattgataactgttatggttcatatgtatgtgtgaaacaggagctcag 48  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||| ||||    
T  14347 tattggtaactcttatggttcatatgtatgtgtgaaacaagaggtcag 14300  T

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Target: scaffold0115 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 21702 - 21658
Alignment:
Q  72 aaaatgatactaataaataatgttagaagatccacataatacaaa 116  Q
    |||||||||||||||||||| |||||| || |||||||| |||||    
T  21702 aaaatgatactaataaataaagttagaggacccacataacacaaa 21658  T

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