View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16177_high_31 (Length: 429)

Name: NF16177_high_31
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16177_high_31
NF16177_high_31
[»] chr3 (4 HSPs)
chr3 (118-419)||(24219589-24219890)
chr3 (125-365)||(16350448-16350688)
chr3 (16-56)||(24219485-24219525)
chr3 (125-365)||(11990710-11990950)
[»] chr1 (6 HSPs)
chr1 (118-414)||(10129486-10129782)
chr1 (118-367)||(4260671-4260920)
chr1 (118-367)||(4264293-4264542)
chr1 (126-366)||(41315666-41315906)
chr1 (248-366)||(17250710-17250828)
chr1 (283-327)||(19489686-19489730)
[»] chr6 (54 HSPs)
chr6 (118-389)||(29881809-29882080)
chr6 (118-389)||(29908965-29909236)
chr6 (118-401)||(24272301-24272584)
chr6 (118-401)||(24730217-24730500)
chr6 (118-395)||(24264106-24264383)
chr6 (118-401)||(29348952-29349235)
chr6 (118-401)||(29834577-29834860)
chr6 (118-401)||(29866011-29866294)
chr6 (126-399)||(29902620-29902893)
chr6 (118-395)||(29928641-29928918)
chr6 (121-401)||(28927339-28927619)
chr6 (118-395)||(29886665-29886942)
chr6 (118-401)||(24886875-24887158)
chr6 (118-401)||(29366775-29367058)
chr6 (118-395)||(29897450-29897726)
chr6 (118-401)||(29073125-29073408)
chr6 (118-401)||(29105698-29105981)
chr6 (118-401)||(29893915-29894198)
chr6 (118-394)||(29098712-29098988)
chr6 (126-401)||(24890608-24890883)
chr6 (118-389)||(25450282-25450553)
chr6 (156-386)||(24711515-24711745)
chr6 (118-394)||(29084387-29084663)
chr6 (118-394)||(29115630-29115906)
chr6 (126-401)||(29211440-29211715)
chr6 (164-395)||(29905021-29905252)
chr6 (188-398)||(29945997-29946207)
chr6 (126-357)||(31000300-31000531)
chr6 (162-365)||(21161023-21161226)
chr6 (126-366)||(15727530-15727770)
chr6 (126-301)||(30153962-30154137)
chr6 (118-256)||(25450625-25450763)
chr6 (126-357)||(24934073-24934304)
chr6 (162-357)||(24941606-24941801)
chr6 (164-327)||(30578168-30578331)
chr6 (125-342)||(16702379-16702596)
chr6 (166-367)||(29876221-29876422)
chr6 (118-209)||(29358333-29358424)
chr6 (118-209)||(29889074-29889165)
chr6 (178-367)||(29950311-29950500)
chr6 (126-365)||(24739557-24739796)
chr6 (178-327)||(30148963-30149112)
chr6 (16-52)||(24264002-24264038)
chr6 (16-56)||(29905348-29905388)
chr6 (162-301)||(29954019-29954158)
chr6 (266-332)||(24726258-24726324)
chr6 (16-49)||(24730571-24730604)
chr6 (16-49)||(24890496-24890529)
chr6 (16-49)||(29084734-29084767)
chr6 (16-49)||(29099059-29099092)
chr6 (16-49)||(29115977-29116010)
chr6 (16-49)||(29889236-29889269)
chr6 (16-56)||(28926797-28926837)
chr6 (17-49)||(29358230-29358262)
[»] scaffold0237 (1 HSPs)
scaffold0237 (118-395)||(21711-21988)
[»] scaffold0054 (1 HSPs)
scaffold0054 (118-401)||(54055-54338)
[»] chr2 (2 HSPs)
chr2 (126-398)||(15063238-15063510)
chr2 (16-49)||(15063126-15063159)
[»] scaffold0014 (4 HSPs)
scaffold0014 (125-365)||(105099-105339)
scaffold0014 (125-366)||(136771-137012)
scaffold0014 (125-297)||(139764-139936)
scaffold0014 (125-225)||(121832-121932)
[»] scaffold1840 (1 HSPs)
scaffold1840 (128-342)||(830-1044)
[»] scaffold0572 (1 HSPs)
scaffold0572 (128-342)||(2652-2866)
[»] scaffold0429 (1 HSPs)
scaffold0429 (125-306)||(5653-5834)
[»] scaffold0051 (2 HSPs)
scaffold0051 (125-390)||(43648-43913)
scaffold0051 (125-225)||(50865-50965)
[»] scaffold0308 (1 HSPs)
scaffold0308 (125-297)||(8461-8633)
[»] scaffold0654 (1 HSPs)
scaffold0654 (118-297)||(1574-1753)
[»] scaffold0110 (1 HSPs)
scaffold0110 (126-367)||(44231-44472)
[»] scaffold0019 (1 HSPs)
scaffold0019 (125-297)||(126484-126656)
[»] chr7 (1 HSPs)
chr7 (125-297)||(3642503-3642675)
[»] chr4 (1 HSPs)
chr4 (162-378)||(44262991-44263207)
[»] scaffold0086 (1 HSPs)
scaffold0086 (126-225)||(31667-31766)
[»] scaffold0573 (1 HSPs)
scaffold0573 (16-56)||(3846-3886)


Alignment Details
Target: chr3 (Bit Score: 282; Significance: 1e-158; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 118 - 419
Target Start/End: Original strand, 24219589 - 24219890
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24219589 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 24219688  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||||    
T  24219689 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcagaatagaaatcaaaagcatcgttaacaa 24219788  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagcatttctaaggcagcctt 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24219789 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagcatttctaaggcagcttt 24219888  T
Q  418 tg 419  Q
    ||    
T  24219889 tg 24219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 365
Target Start/End: Complemental strand, 16350688 - 16350448
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| |||||  ||  |||||||||||||| || || ||||| ||  ||||||| || ||||||||| |||| ||| | ||| |    
T  16350688 gcatcaaccaatatattaaaagtataagcatctgggttgatgtttttcattaccatttcattaaacaaacgaaatgcatctttgaatttaccaacaatac 16350589  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatc 324  Q
    | || ||| | |||| || | |  ||||||||||||| |||  |||||||||  ||| ||||||  |||||||| || | |||| | | || ||||||||    
T  16350588 aaaatccatagattagagaactgaaagtgacaacagtgggaggaattctctttacaatcatttctgaatataaaccataggcatcagttactagtttatc 16350489  T
Q  325 tttgcacacaccatcaataatcgtgttgtacatcaccacat 365  Q
    ||| |||| ||||||||| || ||| | ||||| |||||||    
T  16350488 tttacacaaaccatcaatgattgtgctatacattaccacat 16350448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 24219485 - 24219525
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaatgttagg 56  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  24219485 caatatccattcattaaagagttataagtaacaatgttagg 24219525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 365
Target Start/End: Complemental strand, 11990950 - 11990710
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| |||||   |   ||||||||||||| ||||| ||||| | | |||||||||| ||| |||| || |||||| | |||||    
T  11990950 gcatcaaccaatatattaaaagtataataatcagggttgatgtttttcaataccatttcacgaaacaaaccaaatgcttcttccagttgaccaacaatgc 11990851  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcat-aattaacaagtttat 323  Q
    | || ||| |||||| || | || |||||||||||   ||| ||||| | || |||| ||||| | ||||||| ||| | |||| ||||| ||| |||||    
T  11990850 aaaatccataaattagagcactaaaagtgacaacatcgggagaaattttttttgcaatcatttgagaatataactcataggcatcaattaccaa-tttat 11990752  T
Q  324 ctttgcacacaccatcaataatcgtgttgtacatcaccacat 365  Q
     ||| |||| || |||||| || ||||| ||||| |||||||    
T  11990751 gtttacacaaactatcaatgattgtgttatacattaccacat 11990710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 118 - 414
Target Start/End: Complemental strand, 10129782 - 10129486
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| ||||||||||||||||| | |||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10129782 acaaaaagcatcaaccaatatactcatggtataaacatttgggttaatgttttccaatatcattttatgcaacaaaccaattgcatctttcaattgaccc 10129683  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | || ||| || |||| ||||||| |||||||||||||||||  |||| ||||||||||||| | ||||||| ||||||||| |||||||| ||||||||    
T  10129682 acaacgcaaaagccactaattaaattattataagtgacaacatcaggaaaaattctcttagcgatcatttcagaatataaattaaaagcatcattaacaa 10129583  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagcatttctaaggcagc 414  Q
    ||||||||||||||| ||||||||| ||| || | ||||| ||||||| | |  |||| | ||||||||||| ||||||||||| ||| | ||||||    
T  10129582 gtttatctttgcacataccatcaatgatcatggtatacattaccacattaggctgaacaattttcccatcaactcgtctcagcaattccagggcagc 10129486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 367
Target Start/End: Original strand, 4260671 - 4260920
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| ||||| ||||||  | |||| ||||||||| | ||||| ||||||||| |||||||||| |  |||||||| |  || |||| ||||| |||     
T  4260671 acaaaaggcatctaccaatccattaaaagtatacacattcgggttaatgttttccgatatcatttttttaaacaaacccaacgcttcttccaatttacca 4260770  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | || ||| ||||||  |||||||| | |||||||||||||| ||||| ||||||   ||||||||||||||||||||||||||||||||| ||||||||    
T  4260771 acaacgcaaaaaccatcaattaaagcagtataagtgacaacattaggagaaattccgctagcaaccatttcataatataaatcaaaagcatcattaacaa 4260870  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatca 367  Q
     | |||||||||||| |   ||||||| |||  ||||||| |||||||||    
T  4260871 atgtatctttgcacatattgtcaataaccgtagtgtacattaccacatca 4260920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 118 - 367
Target Start/End: Original strand, 4264293 - 4264542
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| ||||| ||||||  | |||| ||||||||| | ||||| ||||||||| |||||||||| |  |||||||| |  || |||| ||||| |||     
T  4264293 acaaaaggcatctaccaatccattaaaagtatacacattcgggttaatgttttccgatatcatttttttaaacaaacccaacgcttcttccaatttacca 4264392  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | || ||| ||||||  |||||||| | |||||||||||||| ||||| ||||||   ||||||||||||||||||||||||||||||||| ||||||||    
T  4264393 acaacgcaaaaaccatcaattaaagcagtataagtgacaacattaggagaaattccgctagcaaccatttcataatataaatcaaaagcatcattaacaa 4264492  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatca 367  Q
     | |||||||||||| |   ||||||| |||  ||||||| |||||||||    
T  4264493 atgtatctttgcacatattgtcaataaccgtagtgtacattaccacatca 4264542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 126 - 366
Target Start/End: Complemental strand, 41315906 - 41315666
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||| ||  |||| ||||||||  | ||||| ||||||| ||||| ||||| |   |||||||||| |||||||||||||||||| ||||||||    
T  41315906 catcaaccaaaatggtaaaagtatacacgctcgggttaatgtttttcaataccatttgactgaacaaaccaaatgcatctttcaattgaccaataatgca 41315807  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     || ||| | |||| || |||  ||||| |||||  |||| ||||| |||  |||| ||||||| ||||||| ||| |||||| ||| ||||| ||||||    
T  41315806 aaatccatatattagagaattgaaagtggcaacatcaggagaaattttctctgcaatcatttcagaatataactcataagcatcatttacaagcttatct 41315707  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatc 366  Q
    || |||| ||||||||| || ||||| ||||| || |||||    
T  41315706 ttacacaaaccatcaattattgtgttatacattactacatc 41315666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 366
Target Start/End: Complemental strand, 17250828 - 17250710
Alignment:
Q  248 taagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcg 347  Q
    ||||| |||||| ||||| |||  |||||  ||| ||||||| ||||||||||||| ||||   | |||||||||||||| || | |||||||||||| |    
T  17250828 taagtaacaacattaggaaaaaccctcttctcaaacatttcacaatataaatcaaacgcatccctcacaagtttatctttacataaaccatcaataatag 17250729  T
Q  348 tgttgtacatcaccacatc 366  Q
    | || ||||| || |||||    
T  17250728 tattatacattacaacatc 17250710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 327
Target Start/End: Complemental strand, 19489730 - 19489686
Alignment:
Q  283 catttcataatataaatcaaaagcataattaacaagtttatcttt 327  Q
    ||||||| |||||||||||||||||| ||| ||| ||||||||||    
T  19489730 catttcagaatataaatcaaaagcatcatttacatgtttatcttt 19489686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 8e-71; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 29882080 - 29881809
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||  |||||| |||||||||||||||||| |||     
T  29882080 acaaaatccatcaaccaatatactaaaggtatacacattcggattgatgttttccaatatcattttattaaacaaatcaattgcatctttcaatttacca 29881981  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| | |||||||||||||| ||||| |||||||||| ||| |||||||| |||||||||||||||||| |||||||     
T  29881980 acaatgcaaaatccactaattaaagcactataagtgacaacattaggagaaattctctttgcagccatttcagaatataaatcaaaagcatcattaacat 29881881  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaa 389  Q
    |||||||||| ||||  | |||||||||||   ||||||| ||| |||||||  |||||||||| |||||||    
T  29881880 gtttatctttacacatgctatcaataatcgaactgtacattaccgcatcaagctgaaccaattttccatcaa 29881809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 29909236 - 29908965
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||  |||||| |||||||||||||||||| |||     
T  29909236 acaaaatccatcaaccaatatactaaaggtatacacattcggattgatgttttccaatatcattttattaaacaaatcaattgcatctttcaatttacca 29909137  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| | |||||||||||||| ||||| |||||||||| ||| |||||||| |||||||||||||||||| |||||||     
T  29909136 acaatgcaaaatccactaattaaagcactataagtgacaacattaggagaaattctctttgcagccatttcagaatataaatcaaaagcatcattaacat 29909037  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaa 389  Q
    |||||||||| ||||  | |||||||||||   ||||||| ||| |||||||  |||||||||| |||||||    
T  29909036 gtttatctttacacatgctatcaataatcgaactgtacattaccgcatcaagctgaaccaattttccatcaa 29908965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 118 - 401
Target Start/End: Original strand, 24272301 - 24272584
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||||||||||||||||||| |||| |||||||||   ||||||||||||||| || |||||||||  ||||||||||||||||||||||||| |||     
T  24272301 acaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttcaatttacca 24272400  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| ||||||  |||||||| ||||||||||  ||||  |||  |||||||||||| |||||||||| |||||||||||||||||| |||| |||    
T  24272401 acaatgcaaaaaccattaattaaagcattataagtgttaacatcagggaaaattctcttagaaaccatttcagaatataaatcaaaagcatcattatcaa 24272500  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    |||||||||||||||  | ||||||||| ||||||||||| ||||  | | || ||| |||||| ||||||| |||||||||||    
T  24272501 gtttatctttgcacatgctatcaataatggtgttgtacattaccaagttaggttgaagcaatttaccatcaactcgtctcagca 24272584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 118 - 401
Target Start/End: Complemental strand, 24730500 - 24730217
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| |||||||||||||| ||||| ||||||| |   |||||||||||||| ||||||||||| ||||||||||||| ||| |||||||||||||||    
T  24730500 acaaaaagcatcaaccaatatgctaaatgtatacatacgagggttgatgttttctaatatcattttgtgtaacaaaccaactgcctctttcaattgaccc 24730401  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    |||||||| || ||| |||||||| ||||| |||||| | ||  |||| ||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  24730400 ataatgcagaagccataaattaaactattacaagtgaaatcatcaggagaaattctcttagcaaccatttgagaatataaatcaaaagcatcattaacaa 24730301  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    | ||| ||||||||| |  |||||||||| |||||||||| ||| ||| | |  |||| ||||||||||||| |||| ||||||    
T  24730300 gcttagctttgcacatattatcaataatcatgttgtacattaccgcattaggctgaactaatttcccatcaactcgtttcagca 24730217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 118 - 395
Target Start/End: Original strand, 24264106 - 24264383
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||||||||||||||||||| |||| |||||||||   ||||||||||||||| || |||||||||  ||||||||||||||||||||||||| |||     
T  24264106 acaaaatgcatcaaccaatatattaaaagtatacacatcagggttgatgttttccgatgtcattttattgaacaaaccaattgcatctttcaatttacca 24264205  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| | |||||||||||| | | | | |||||||| ||| |||||||||| |||||||||||||||||| |||||||     
T  24264206 acaatgcaaaagccactaattaaagcactataagtgacaatattggaagaaattctcctagaaaccatttcagaatataaatcaaaagcatcattaacat 24264305  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtc 395  Q
     ||||||||| |||| || ||||||||||||  ||||||| |||||||||||  |||||||||| ||||||| |||||    
T  24264306 ttttatctttacacatactatcaataatcgtactgtacattaccacatcaagctgaaccaattttccatcaactcgtc 24264383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 401
Target Start/End: Original strand, 29348952 - 29349235
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||||||||||||||||||   |||||||| | |||| ||||||||||||  ||||||||||||||||| ||||||| |||     
T  29348952 acaaaatccatcaaccaatatactaaaggtatacacatcagggttgatttcttccgatatcattttattgaacaaaccaattgcatcattcaatttacca 29349051  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| ||||||| |||||||| | | ||||| ||||||   ||| |||| | ||||| |||||||||| |||||||||||||||| | ||||||||    
T  29349052 agaatgcaaaaaccactaattaaagcactgtaagtaacaacatcgggagaaatccccttagaaaccatttcagaatataaatcaaaagcttcattaacaa 29349151  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||| |||||||||  | ||||||||| ||||||||||| ||||||| | || |||||||||| ||||||| |||||||||||    
T  29349152 gtttaactttgcacatgctatcaataatggtgttgtacattaccacattaggttgaaccaatttaccatcaactcgtctcagca 29349235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 401
Target Start/End: Complemental strand, 29834860 - 29834577
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||||||||||||||||||| |||||||||||| |   |||||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||     
T  29834860 acaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaatttacca 29834761  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| ||| |||| ||| ||||||| ||||  |||  |||||||||||| |||||||||| |||||||||||||||||| |||||||     
T  29834760 acaatgcaaaagccactaatcaaagcattgtaagtgaaaacatcaggggaaattctcttagaaaccatttcagaatataaatcaaaagcatcattaacat 29834661  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    |||||||||| |||| |||||| ||||| || |||||||| ||||||  | |  |||||||||||||||| |  ||||||||||    
T  29834660 gtttatctttacacataccatcgataatggtattgtacattaccacactaggctgaaccaatttcccatctacacgtctcagca 29834577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 118 - 401
Target Start/End: Complemental strand, 29866294 - 29866011
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||||||||||||||||||| |||||||||||| |   |||||||||||||||||| |||||||||  ||||||||||||||||||||||||| |||     
T  29866294 acaaaatgcatcaaccaatatattaaaggtatacatatcagggttgatgttttccaatgtcattttattgaacaaaccaattgcatctttcaatttacca 29866195  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| ||| |||| ||| ||||||| ||||  |||  |||||||||||| |||||||||| |||||||||||||||||| |||||||     
T  29866194 acaatgcaaaagccactaatcaaagcattgtaagtgaaaacatcaggggaaattctcttagaaaccatttcagaatataaatcaaaagcatcattaacat 29866095  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    |||||||||| |||| |||||| ||||| || |||||||| ||||||  | |  |||||||||||||||| |  ||||||||||    
T  29866094 gtttatctttacacataccatcgataatggtattgtacattaccacactaggctgaaccaatttcccatctacacgtctcagca 29866011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 126 - 399
Target Start/End: Complemental strand, 29902893 - 29902620
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||  || ||| ||||||||||| ||| || ||| | ||||||    
T  29902893 catcaaccaatatagtaaaagtatacacatttgggttgatgttttcgaatatcattttattaaagaaatcaattgcatctctcagtttaccaacaatgca 29902794  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     || |||| |||||||| | |||||||||||||| ||||| || ||||| ||| |||||||||| |||||||||||||||||| |||||||| |||| ||    
T  29902793 aaatccactaattaaagcactataagtgacaacattaggagaagttctcctagaaaccatttcaaaatataaatcaaaagcatcattaacaaatttacct 29902694  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcag 399  Q
    ||||||| ||||||||||||||| || ||||| ||||||| | |  |||||||||||| |||||  ||||||||    
T  29902693 ttgcacataccatcaataatcgtattatacattaccacattaggctgaaccaatttccgatcaacacgtctcag 29902620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 118 - 395
Target Start/End: Complemental strand, 29928918 - 29928641
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| ||||||||||||||||||||||||||| |   ||  ||||||||| ||||||||||||||  || ||| ||| |||||||||||||| |||     
T  29928918 acaaaatccatcaaccaatatactaaaggtatacaaatacggaatgatgttttacaatatcattttattaaaaaaatcaaatgcatctttcaatttacca 29928819  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| | |||||||||||||| ||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||     
T  29928818 acaatgcaaaatccactaattaaagcactataagtgacaacattaggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacat 29928719  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtc 395  Q
    |||||||||| |||| |||||| ||||| || |||||||| ||||||||| |  |||| ||||| ||||||| |||||    
T  29928718 gtttatctttacacataccatcgataatggtattgtacattaccacatcaggctgaacaaattttccatcaaatcgtc 29928641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 121 - 401
Target Start/End: Original strand, 28927339 - 28927619
Alignment:
Q  121 aaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccata 220  Q
    ||||||||||| ||||||| |||||||||||| | |||||||||| |||||  ||||||||||||| ||||||||||||| ||| ||||||| ||| | |    
T  28927339 aaatgcatcaatcaatatattaaaggtatacatatttgggttgatcttttctgatatcattttatgaaacaaaccaattgaatcattcaatttaccaaga 28927438  T
Q  221 atgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtt 320  Q
    ||||| ||||||| |||||||| | | ||||| |||||    ||| |||| | ||||| |||||||||| |||||||||||||||| | |||||||||||    
T  28927439 atgcaaaaaccactaattaaagcactgtaagtaacaacttcgggagaaatccccttagaaaccatttcagaatataaatcaaaagcttcattaacaagtt 28927538  T
Q  321 tatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||||| |||| || |||||||||| |  ||||||| ||||||||| || |||||||||||||||||| |||||||||||    
T  28927539 tatctttacacatactatcaataatcatagtgtacattaccacatcaggttgaaccaatttcccatcaactcgtctcagca 28927619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 118 - 395
Target Start/End: Complemental strand, 29886942 - 29886665
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||| | || |||||||||  || ||| || ||||||||||||||| |||     
T  29886942 acaaaatgcatcaaccaatatattaaaagtatacacagttgggttgatgtttttcgatgtcattttattgaataaatcagttgcatctttcaatttacca 29886843  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| ||| ||||||| ||||   ||  |||||||||||| | |||||||| |||||||||||||||||| |||||||     
T  29886842 acaatgcaaaagccactaattaaagcattgtaagtgaaaacatcggggaaaattctcttagaagccatttcagaatataaatcaaaagcatcattaacat 29886743  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtc 395  Q
    |||||||||| |||| |||||| ||||| || |||||||| ||||||||| |  |||||||||| ||||||| |||||    
T  29886742 gtttatctttacacataccatcgataatggtattgtacattaccacatcaggctgaaccaattttccatcaactcgtc 29886665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 118 - 401
Target Start/End: Original strand, 24886875 - 24887158
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| ||||||||| ||||| ||||||||||||||   |||||||| ||||||  | |||||||||  ||||| ||||||| ||| ||||||| |||     
T  24886875 acaaaaagcatcaaccgatatattaaaggtatacacatccgggttgatattttccgctgtcattttattgaacaacccaattgtatcattcaatttacca 24886974  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| ||||||| |||||||| | | ||||||| ||||  |||| |||||||||| || ||||||||| |||||||||||||||||| ||||||||    
T  24886975 acaatgcaaaaaccactaattaaagcactgtaagtgataacatcaggagaaattctcttcgcgaccatttcagaatataaatcaaaagcatcattaacaa 24887074  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||| ||||||||| |||||||||||| ||| ||||||| | ||||| | || |||||||||| ||||||| |||||||||||    
T  24887075 gtttacctttgcacataccatcaataatggtgctgtacattatcacattaggttgaaccaatttgccatcaactcgtctcagca 24887158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 118 - 401
Target Start/End: Original strand, 29366775 - 29367058
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||  |||| ||||||||| |||||||||||||||| |||||||||||||  |||||| || |||||||||||| || |||     
T  29366775 acaaaatccatcaaccaatatgttaaaagtatacacatttgggttgatgttttcgaatatcattttattaaacaaatcagttgcatctttcattttaccg 29366874  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| ||| ||||| ||||||   ||| |||| | ||||| |||||||||| |||||||||||||||| | ||||||||    
T  29366875 acaatgcaaaagccactaattaaagcattgtaagtaacaacatcgggagaaatccccttagaaaccatttcagaatataaatcaaaagcttcattaacaa 29366974  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    | ||| |||||||||  | ||||||||| ||||||||||| ||||||| | || |||||||||| ||||||| |||||||||||    
T  29366975 gcttaactttgcacatgctatcaataatggtgttgtacattaccacattaggttgaaccaatttaccatcaactcgtctcagca 29367058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 118 - 395
Target Start/End: Complemental strand, 29897726 - 29897450
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| ||||||||| |||||||||||||||||||   ||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||     
T  29897726 acaaaatccatcaacca-tatactaaaggtatacacatccgggatgatgtttttcaatatcattttattgaacaaaccaattgcatctttcaatttacca 29897628  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||  |||||||| | | ||||| ||||||   ||| |||||||||| |||||||||||| |||||||||||||||||| |||||||     
T  29897627 acaatgcaaaagccaataattaaagcactgtaagtaacaacaccgggataaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacat 29897528  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtc 395  Q
    |||||||||| |||| |||||||||||  || |||||||| ||| ||| |||  |||||||||| ||||||| |||||    
T  29897527 gtttatctttacacataccatcaataacggtattgtacattaccgcattaagctgaaccaatttaccatcaactcgtc 29897450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 118 - 401
Target Start/End: Complemental strand, 29073408 - 29073125
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||| |||| |||||||||   || |||||||||||||||||||||||||  |||| | ||||||||||||||| || |||     
T  29073408 acaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttacca 29073309  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||| | || |||| |||||||| | | ||||| ||||||  |||| |||||| || || |||||||||| |||||||||||||||| | ||||||||    
T  29073308 acaatgaaaaacccactaattaaagcactgtaagtaacaacatcaggagaaattccctcagaaaccatttcagaatataaatcaaaagcttcattaacaa 29073209  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||| |||||||||  | ||||||||| ||||||||||| ||||||| | || |||||||||| ||||| | |||||||||||    
T  29073208 gtttaactttgcacatgctatcaataatggtgttgtacattaccacattaggttgaaccaatttaccatcgactcgtctcagca 29073125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 118 - 401
Target Start/End: Complemental strand, 29105981 - 29105698
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||| |||| |||||||||   || |||||||||||||||||||||||||  |||| | ||||||||||||||| || |||     
T  29105981 acaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttacca 29105882  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||| | || |||| |||||||| | | ||||| ||||||  |||| |||||| || || |||||||||| |||||||||||||||| | ||||||||    
T  29105881 acaatgaaaaacccactaattaaagcactgtaagtaacaacatcaggagaaattccctcagaaaccatttcagaatataaatcaaaagcttcattaacaa 29105782  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||| |||||||||  | ||||||||| ||||||||||| ||||||| | || |||||||||| ||||| | |||||||||||    
T  29105781 gtttaactttgcacatgctatcaataatggtgttgtacattaccacattaggttgaaccaatttaccatcgactcgtctcagca 29105698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 118 - 401
Target Start/End: Complemental strand, 29894198 - 29893915
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||| |||| |||||||||   || |||||||||||||||||||||||||  |||| | ||||||||||||||| ||||||     
T  29894198 acaaaatccatcaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagttgacca 29894099  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | | || | || |||| |||||||| | | ||||| |||||| | ||| |||||| ||||| |||||||||| |||||||||||||||||| |||||||     
T  29894098 acagtgaaaaacccactaattaaagcactgtaagtaacaacattgggagaaattcccttagaaaccatttcagaatataaatcaaaagcatcattaacat 29893999  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    |||||||||| |||| |||||| ||||| ||  ||||||| ||||||| | |  ||||||| || ||||||| |||||| ||||    
T  29893998 gtttatctttacacataccatcgataatggtactgtacattaccacattaggctgaaccaaattaccatcaactcgtctgagca 29893915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 118 - 394
Target Start/End: Complemental strand, 29098988 - 29098712
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||||||| |||||||||| |||| |||||||||   || |||||||||||||||||||||||||  |||| | ||||||||||||||| || |||     
T  29098988 acaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttacca 29098889  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| ||||||| |||||||| | | ||||| ||||||   ||| |||| | ||||| |||||||||| || ||||||||||||| | ||||||||    
T  29098888 agaatgcaaaaaccactaattaaagcactgtaagtaacaacatcgggagaaatccccttagaaaccatttcagaaaataaatcaaaagcttcattaacaa 29098789  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgt 394  Q
    ||||| |||||||||  | ||||||||| ||||||||||| ||||||| | |  ||||||| || ||||||| ||||    
T  29098788 gtttaactttgcacatgctatcaataatggtgttgtacattaccacattaggctgaaccaaattaccatcaactcgt 29098712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 126 - 401
Target Start/End: Original strand, 24890608 - 24890883
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||||  | |||||||||  |||||| |||||||||  ||||||| |   | |  | |    
T  24890608 catcaaccagtatattaaaggtatacacatttgggttgatgttttcctttttcattttattgaacaaatcaattgcatagttcaatttagaaacagcgga 24890707  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     ||||||| |||||||| ||| ||||||| ||||  ||| |||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||| ||    
T  24890708 aaaaccactaattaaagcattgtaagtgaaaacatcagggcaaattctcttagcaaccatttgagaatataaatcaaaagcatcattaacaagcttagct 24890807  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||||| |  |||||||||| |||||||||| ||| ||| | |  |||| ||||||||||||| |||| ||||||    
T  24890808 ttgcacatattatcaataatcatgttgtacattaccgcattaggctgaactaatttcccatcaactcgtttcagca 24890883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 118 - 389
Target Start/End: Complemental strand, 25450553 - 25450282
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||| |||| | |  ||||||| |||||||||||||||||| ||     
T  25450553 acaaaatccatcaaccaatatattgaaggtatacacagttgggttgatgttttccgataccattatcttaaacaaactaattgcatctttcaattgtcca 25450454  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    |  ||||| |  |||  || || |||||| ||||||| |||| ||||| |||| |||||||||| |||||||||||||||||||||||||   |||||||    
T  25450453 acgatgcaaaggccatgaagtagagtattgtaagtgataacattaggagaaatcctcttagcaagcatttcataatataaatcaaaagcaacgttaacaa 25450354  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaa 389  Q
    |||||||||| ||||  | |||||||| |  ||||||||| || |||| | |  |||||||||| |||||||    
T  25450353 gtttatctttacacattctatcaataagcacgttgtacattactacatgaggctgaaccaatttaccatcaa 25450282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 156 - 386
Target Start/End: Complemental strand, 24711745 - 24711515
Alignment:
Q  156 ttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgac 255  Q
    ||||||||||||| ||   | |||||||||  ||||| | ||||||||| ||||||| ||| | |||||| | ||||| |||||||| | ||||||||||    
T  24711745 ttgggttgatgttgtctgctgtcattttattgaacaaccaaattgcatcattcaatttaccaacaatgcaaacaccactaattaaagcactataagtgac 24711646  T
Q  256 aacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtac 355  Q
    ||||  ||| ||||||||||||||| |||||||| ||||||||||||| |||| |||||||||||||| |||||| | || ||||||||| ||| |||||    
T  24711645 aacatcagggcaaattctcttagcagccatttcagaatataaatcaaatgcatcattaacaagtttatatttgcataaactatcaataattgtggtgtac 24711546  T
Q  356 atcaccacatcaagtcgaaccaatttcccat 386  Q
    || ||||||| | || |||||||||||||||    
T  24711545 attaccacattaggttgaaccaatttcccat 24711515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 118 - 394
Target Start/End: Complemental strand, 29084663 - 29084387
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||| |||| |||||| ||   || ||||||||||||||||| |||||||  |||| | ||||||||||||||| || |||     
T  29084663 acaaaatccatcaaccaatatattaaaagtatacccatccggtttgatgttttccaatattattttattaaacagatcaattgcatctttcagtttacca 29084564  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | || | | || |||| |||||||| | | ||||| |||||| | ||| |||||| ||||| |||||||||| |||||||||||||||||| |||||||     
T  29084563 acaacgaaaaacccactaattaaagcactgtaagtaacaacattgggagaaattcccttagaaaccatttcagaatataaatcaaaagcatcattaacat 29084464  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgt 394  Q
    |||||||||| |||| ||||| |||||  || |||||||| ||| ||| |||  |||||||||| ||||||| ||||    
T  29084463 gtttatctttacacataccataaataacggtattgtacattaccgcattaagctgaaccaatttaccatcaactcgt 29084387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 118 - 394
Target Start/End: Complemental strand, 29115906 - 29115630
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||||||| |||||||||| |||| |||||||||   || |||||||||||||||||||||||||  |||| | |||||||||| |||| || |||     
T  29115906 acaaaatgcattaaccaatatattaaaagtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatcattcagtttacca 29115807  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| ||||||| |||||||| | | ||||| ||||||   ||| |||| | ||||| || ||||||| || ||||||||||||| | ||||||||    
T  29115806 agaatgcaaaaaccactaattaaagcactgtaagtaacaacatcgggagaaatccccttagaaatcatttcagaaaataaatcaaaagcttcattaacaa 29115707  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgt 394  Q
    ||||| |||||||||  | ||||||||| ||||||||||| ||||||| | |  ||||||| || ||||||| ||||    
T  29115706 gtttaactttgcacatgctatcaataatggtgttgtacattaccacattaggctgaaccaaattaccatcaactcgt 29115630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 126 - 401
Target Start/End: Original strand, 29211440 - 29211715
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||||||| |||| |||||||||   || |||||||||||| ||||||||||||  |||| | ||| ||||||||||| || ||| | | || |    
T  29211440 catcaaccaatatattaaaagtatacacatccggtttgatgttttccgatatcattttattaaacagatcaactgcatctttcagtttaccaacagtgaa 29211539  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     || |||| |||||||| | | ||||| |||||| | ||| |||||| ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||    
T  29211540 aaacccactaattaaagcactgtaagtaacaacattgggagaaattcccttagaaaccatttcagaatataaatcaaaagcatcattaacatgtttatct 29211639  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    || |||| |||||| ||||| ||  ||||||| ||||||| | |  |||||||||| ||||||| |||||| ||||    
T  29211640 ttacacataccatcgataatggtactgtacattaccacattaggctgaaccaatttaccatcaactcgtctgagca 29211715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 164 - 395
Target Start/End: Complemental strand, 29905252 - 29905021
Alignment:
Q  164 atgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtag 263  Q
    |||||||||||| |||||||||  || |||||||||||||||||||||| ||| | |||||| ||  ||| |||||||| ||| ||||||| || |  ||    
T  29905252 atgttttccaatgtcattttattgaaaaaaccaattgcatctttcaatttaccaacaatgcaaaagtcactaattaaagcattgtaagtgagaatatcag 29905153  T
Q  264 gacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcaccac 363  Q
    |  |||||||||||| |||||||| | |||||||||||||||||| ||||||| |||||||||| |||| || |||||||||||   ||||| | |||||    
T  29905152 gggaaattctcttagaaaccattttagaatataaatcaaaagcatgattaacatgtttatctttacacatactatcaataatcgcaatgtactttaccac 29905053  T
Q  364 atcaagtcgaaccaatttcccatcaattcgtc 395  Q
    |||| || |||||| ||| ||||||| |||||    
T  29905052 atcaggttgaaccagttttccatcaactcgtc 29905021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 188 - 398
Target Start/End: Complemental strand, 29946207 - 29945997
Alignment:
Q  188 aacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccattt 287  Q
    |||||||||| |||||| ||||||||||||| |||||| || |||  ||||||||| || ||||| ||||   | ||| |||||||||||| ||||||||    
T  29946207 aacaaaccaaatgcatcattcaattgacccacaatgcaaaagccatgaattaaagtgttgtaagttacaatgttcggagaaattctcttagtaaccattt 29946108  T
Q  288 cataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatc 387  Q
    || |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||    | ||||| ||||||||| || |||||||||| | |||    
T  29946107 cagaatataaatcaacaacatcattaacaagtttatctttgcacataccatcaataatcacactatacattaccacatcaggttgaaccaattttctatc 29946008  T
Q  388 aattcgtctca 398  Q
    ||  |||||||    
T  29946007 aacacgtctca 29945997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 126 - 357
Target Start/End: Original strand, 31000300 - 31000531
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    ||||||||| |||| ||||||||||||||   |||||||||||||||  | |||||||||  ||||||||||||||||| ||||||| |   | |    |    
T  31000300 catcaaccagtatattaaaggtatacacatccgggttgatgttttccgctgtcattttattgaacaaaccaattgcatcattcaatttagaaacagcaga 31000399  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     ||||||| |||||||| ||| ||||||| ||||  | | | |||||||||||||||||||||| ||||||||||||||||||  || |||||||||| |    
T  31000400 aaaaccactaattaaagcattgtaagtgaaaacatcaaggccaattctcttagcaaccatttcagaatataaatcaaaagcatcgttgacaagtttatat 31000499  T
Q  326 ttgcacacaccatcaataatcgtgttgtacat 357  Q
    ||||| | || ||||||||| ||| |||||||    
T  31000500 ttgcataaactatcaataattgtggtgtacat 31000531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 162 - 365
Target Start/End: Original strand, 21161023 - 21161226
Alignment:
Q  162 tgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagt 261  Q
    ||||||||| ||| | ||||| || ||||||| ||||||| | ||||| |||||||| |||||| || ||| | |||||||||||||| || || ||| |    
T  21161023 tgatgtttttcaacaacatttcatttaacaaatcaattgcttgtttcatttgacccacaatgcaaaagccatatattaaagtattataggtaaccacatt 21161122  T
Q  262 aggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcacc 361  Q
    |||| | |||||| | |||||||||||| |||||||||||||||||| | | ||||||||||| ||||| | || || |||||| ||  ||||||| |||    
T  21161123 aggaaatattctcatggcaaccatttcagaatataaatcaaaagcatcaattacaagtttatccttgcataaactataaataattgtactgtacatgacc 21161222  T
Q  362 acat 365  Q
    ||||    
T  21161223 acat 21161226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 126 - 366
Target Start/End: Original strand, 15727530 - 15727770
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||||||  |||| ||||| | |  |||||||||||||| ||||| ||||| ||  |||||||||| ||| |||||||||||||| | ||||||    
T  15727530 catcaaccaatatgttaaaagtataaatatctgggttgatgtttttcaatagcatttgatagaacaaaccaaatgcttctttcaattgaccaacaatgca 15727629  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     || ||  ||||||||| |||  |||||| || | ||||| |||||||||| | || ||||||| ||||||| ||| | |||| | | |||| ||||| |    
T  15727630 aaatccgtaaattaaagaattgaaagtgataatattaggagaaattctctttgtaatcatttcagaatataactcataggcatcagttacaaatttatgt 15727729  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatc 366  Q
    || |||| || |||||| ||||| |||| ||| ||||||||    
T  15727730 ttacacaaactatcaatgatcgtattgtgcattaccacatc 15727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 126 - 301
Target Start/End: Complemental strand, 30154137 - 30153962
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||||||| | |||||||||||| | |||||| ||||||  | |||||||| ||  |||||||||| ||| ||||  |||||||||| ||||||    
T  30154137 catcaaccaatatattgaaggtatacacattggggttggtgtttttgagtatcatttcattgaacaaaccaactgcttcttcgaattgacccacaatgca 30154038  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatca 301  Q
     || ||| | |||||| ||||  ||||||| ||| ||||| ||||| ||||| ||| ||||||| |||||||||||    
T  30154037 aaatccatagattaaactattgaaagtgacgacattaggataaattttcttaacaatcatttcagaatataaatca 30153962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 256
Target Start/End: Complemental strand, 25450763 - 25450625
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| ||||||||||||||| |||| ||||||||| | ||||| |  ||| |||||||||||||||  |||||| ||| ||| |||||||||| |||     
T  25450763 acaaaaagcatcaaccaatatagtaaaagtatacacattcgggttaacctttcccaatatcattttattaaacaaatcaactgcttctttcaatttacca 25450664  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgaca 256  Q
    | |||||| || |||| |||||||||| |||||||||||    
T  25450663 acaatgcaaaagccacgaattaaagtactataagtgaca 25450625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 357
Target Start/End: Complemental strand, 24934304 - 24934073
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||||||| |||| ||||| ||   ||| || ||||||| ||| | ||||| ||  |||||||||| ||| ||||||||| |||||| |||  |    
T  24934304 catcaaccaatatattaaatgtataaacgtctggtttaatgtttttcaacaacatttgattgaacaaaccaactgcttctttcaatcgacccacaatcaa 24934205  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
      | ||| | |||| |||| ||||||||||||||   ||| ||||||||||| ||| ||||||| || |||||||| | |||| | | |||||||||||     
T  24934204 acagccatatattagagtagtataagtgacaacatctggaaaaattctcttaacaatcatttcagaacataaatcagaggcatgaattacaagtttatcc 24934105  T
Q  326 ttgcacacaccatcaataatcgtgttgtacat 357  Q
    ||||||| || ||||||||| || ||||||||    
T  24934104 ttgcacaaactatcaataattgtattgtacat 24934073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 357
Target Start/End: Complemental strand, 24941801 - 24941606
Alignment:
Q  162 tgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagt 261  Q
    ||||||||| ||| | ||||| || |||||||| ||  || ||||| |||||||||| ||| || || ||| | |||| |||| ||||||||||||||      
T  24941801 tgatgtttttcaacaacatttgatttaacaaacgaacagcttctttaaattgacccacaatacaaaagccatatattagagtagtataagtgacaacatc 24941702  T
Q  262 aggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacat 357  Q
     ||| ||||||||||| ||| ||||||| || |||||||| | |||| | | ||||||||||| ||||||| || ||||||||| || ||||||||    
T  24941701 tggaaaaattctcttaacaatcatttcagaacataaatcagaggcatgaattacaagtttatccttgcacaaactatcaataattgtattgtacat 24941606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 164 - 327
Target Start/End: Original strand, 30578168 - 30578331
Alignment:
Q  164 atgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtag 263  Q
    ||||||| |||| |||||| ||  ||||||| ||| ||||||| ||||||||||| ||| || |||||| | |||| ||||||||| |||||||||  ||    
T  30578168 atgtttttcaatctcatttcattaaacaaacgaatagcatcttccaattgacccacaatacaaaaaccatatattagagtattatacgtgacaacatcag 30578267  T
Q  264 gacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatcttt 327  Q
    || ||||||||||  ||||||| ||| ||||||||||| | |||| |   ||||||||||||||    
T  30578268 gaaaaattctcttgacaaccatctcacaatataaatcatacgcatcaactacaagtttatcttt 30578331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 342
Target Start/End: Original strand, 16702379 - 16702596
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||| ||||| ||| ||||||| ||  || |||||||||||||| | |||||    
T  16702379 gcatcaaccaatatattaaaagtataaacatttgggttgatgtttttcaataccatttcatggaacaaactaaacgcttctttcaattgaccaacaatgc 16702478  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatc 324  Q
    | || | | | |||| || | |  |||||||||| || |||  |||||||||  ||| ||||||  |||||||| || | |||| | | || ||||||||    
T  16702479 aaaatcaatagattagagaactgaaagtgacaacggtgggaggaattctctttacaatcatttctgaatataaaccataggcatcaattactagtttatc 16702578  T
Q  325 tttgcacacaccatcaat 342  Q
    ||| |||| |||||||||    
T  16702579 tttacacaaaccatcaat 16702596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 166 - 367
Target Start/End: Complemental strand, 29876422 - 29876221
Alignment:
Q  166 gttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtagga 265  Q
    |||||||||| |||| | ||  ||||||||||| |||||||||||  |||||| ||  || |||||| |||| |  | ||||||||| | ||||   |||    
T  29876422 gttttccaatttcatatcattaaacaaaccaatagcatctttcaaccgacccacaacacaaaaaccataaatcatcgcattataagtaaaaacatccgga 29876323  T
Q  266 caaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcaccacat 365  Q
     ||| |||||||||||||||||||  ||| |||||||| |||| || |||||| |||||||| |||| ||||| |||||||| | | ||||| |||||||    
T  29876322 gaaactctcttagcaaccatttcagtatacaaatcaaacgcatcatcaacaagcttatctttacacaaaccattaataatcgcggtatacattaccacat 29876223  T
Q  366 ca 367  Q
    ||    
T  29876222 ca 29876221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 209
Target Start/End: Original strand, 29358333 - 29358424
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttca 209  Q
    ||||||| ||||||| |||||| ||||||||||||||   ||||||||||||||||||||||||||||  |||| | ||| |||||||||||    
T  29358333 acaaaatccatcaactaatatagtaaaggtatacacatccgggttgatgttttccaatatcattttattaaacagatcaactgcatctttca 29358424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 118 - 209
Target Start/End: Complemental strand, 29889165 - 29889074
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttca 209  Q
    ||||||| ||||||||| |||  |||||||||||||| | || |||||||||||||||||||||||||  ||  || |||||||||||||||    
T  29889165 acaaaatccatcaaccattatgttaaaggtatacacattcggattgatgttttccaatatcattttattaaaacaatcaattgcatctttca 29889074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 367
Target Start/End: Original strand, 29950311 - 29950500
Alignment:
Q  178 cattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctctta 277  Q
    ||||| || ||||||||||| ||| ||||||| |||||||| |||| | |||||| | |||| |||||| |||||||  ||| |||||  |||| | |||    
T  29950311 catttgatttaacaaaccaactgcttctttcatttgacccaaaatggaaaaaccatatattagagtattgtaagtgatgacattaggatgaattttgtta 29950410  T
Q  278 gcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatca 367  Q
     ||| ||||||| ||||||||||| |  ||| | ||||||| |||||||| || | | | ||||| || ||||||||||| || ||||||    
T  29950411 acaatcatttcagaatataaatcatacccatcactaacaagcttatctttacagagagcgtcaatgattgtgttgtacataacgacatca 29950500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 365
Target Start/End: Original strand, 24739557 - 24739796
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||||||||||| |||| ||||| |    ||| || ||||||| ||| | ||||| ||  |||||||||| ||| ||||||||| |||||| |||  |    
T  24739557 catcaaccaatatattaaatgtataaatgtctggtttaatgtttttcaacaacatttgattgaacaaaccaactgcttctttcaatcgacccacaatcaa 24739656  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
      | ||| | ||||||||||| |||||||  |||  |||| ||||||||||   || ||||| | |||||||||||||||||| | | |||||||||||     
T  24739657 acagccatacattaaagtattgtaagtgatgacatcaggagaaattctcttgagaagcatttgagaatataaatcaaaagcatcaattacaagtttatcc 24739756  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacat 365  Q
    ||||| | || || |||||| ||  ||||||| |||||||    
T  24739757 ttgcataaactataaataattgtactgtacatgaccacat 24739796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 178 - 327
Target Start/End: Complemental strand, 30149112 - 30148963
Alignment:
Q  178 cattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctctta 277  Q
    ||||| || ||||||||||| ||| ||||||| |||||||| |||| | |||||| | |||| |||||| |||||||  ||| |||||  |||| | |||    
T  30149112 catttgatttaacaaaccaactgcttctttcatttgacccaaaatggaaaaaccatatattagagtattgtaagtgatgacattaggatgaattttgtta 30149013  T
Q  278 gcaaccatttcataatataaatcaaaagcataattaacaagtttatcttt 327  Q
     ||| ||||||| ||||||||||| |  ||| | ||||||| ||||||||    
T  30149012 acaatcatttcagaatataaatcatacccatcactaacaagcttatcttt 30148963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 24264002 - 24264038
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaatgt 52  Q
    |||||||||| ||||||||||||||||||||||||||    
T  24264002 caatatccatccattaaagagttataagtaacaatgt 24264038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 29905388 - 29905348
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaatgttagg 56  Q
    |||||||||| ||||||||||||||||||||||| ||||||    
T  29905388 caatatccatccattaaagagttataagtaacaaagttagg 29905348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 301
Target Start/End: Original strand, 29954019 - 29954158
Alignment:
Q  162 tgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagt 261  Q
    ||||||||| ||| | ||||| || |||||||  || ||| ||||||||  | |||| |||||| || ||| | ||||||||  | |||||||||||| |    
T  29954019 tgatgtttttcaacaacatttgatttaacaaattaactgcttctttcaaccgtcccacaatgcaaaagccatatattaaagtcgtgtaagtgacaacatt 29954118  T
Q  262 aggacaaattctcttagcaaccatttcataatataaatca 301  Q
    |||| ||||| ||||  ||| ||||||| |||||||||||    
T  29954119 aggagaaattttcttgacaatcatttcagaatataaatca 29954158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 24726324 - 24726258
Alignment:
Q  266 caaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcaca 332  Q
    ||||| |||||| ||||||||||||||||||||||||| |  | | | | |||||||||||||||||    
T  24726324 caaatgctcttatcaaccatttcataatataaatcaaatgtttcaattagaagtttatctttgcaca 24726258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 24730604 - 24730571
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  24730604 caatatccatccattaaagagttataagtaacaa 24730571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 24890496 - 24890529
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  24890496 caatatccatccattaaagagttataagtaacaa 24890529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 29084767 - 29084734
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  29084767 caatatccatccattaaagagttataagtaacaa 29084734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 29099092 - 29099059
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  29099092 caatatccatccattaaagagttataagtaacaa 29099059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 29116010 - 29115977
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  29116010 caatatccatccattaaagagttataagtaacaa 29115977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 29889269 - 29889236
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  29889269 caatatccatccattaaagagttataagtaacaa 29889236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 28926797 - 28926837
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaatgttagg 56  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  28926797 caatatccatccattaaagagctataagtaacaacgttagg 28926837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 49
Target Start/End: Original strand, 29358230 - 29358262
Alignment:
Q  17 aatatccattcattaaagagttataagtaacaa 49  Q
    ||||||||| |||||||||||||||||||||||    
T  29358230 aatatccatccattaaagagttataagtaacaa 29358262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 110; Significance: 3e-55; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 118 - 395
Target Start/End: Complemental strand, 21988 - 21711
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| |||||||||||||||||||||||||||||  |||| ||||||||| | || |||||||||  || ||| |||||||||||||||||| |||     
T  21988 acaaaatccatcaaccaatatactaaaggtatacacatctgggatgatgtttttcgatgtcattttattgaataaatcaattgcatctttcaatttacca 21889  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||||| || |||| |||||||| ||| ||||||| ||||   ||  |||||||||||| |||| ||||| |||||||||||||||||| |||||||     
T  21888 acaatgcaaaagccactaattaaagcattgtaagtgaaaacatcggggaaaattctcttagaaaccttttcagaatataaatcaaaagcatcattaacat 21789  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtc 395  Q
    |||||||||| |||| |||||| ||||| || |||||||| ||||||||| |  |||| ||||| |||||| ||||||    
T  21788 gtttatctttacacataccatcgataatggtattgtacattaccacatcaggctgaactaattttccatcatttcgtc 21711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 100; Significance: 3e-49; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 118 - 401
Target Start/End: Original strand, 54055 - 54338
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    ||||||| ||||||| |||||| ||||||||||||||   || |||||||||||||||||||||||||  |||| | ||||||||||||||| || |||     
T  54055 acaaaatccatcaactaatatattaaaggtatacacatccggtttgatgttttccaatatcattttattaaacagatcaattgcatctttcagtttacca 54154  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaa 317  Q
    | |||| | || || | |||||||| | | ||||| ||||||   ||| |||||||||| |||||||||||| |||||||||||||||||| |||||||     
T  54155 acaatgaaaaaccctctaattaaagcactgtaagtaacaacatcgggagaaattctctttgcaaccatttcagaatataaatcaaaagcatcattaacat 54254  T
Q  318 gtttatctttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctcagca 401  Q
    ||||||||||  ||| |||||||||||  || |||||||| ||| ||| |||  |||||||||| |||||||  ||||||||||    
T  54255 gtttatctttatacataccatcaataacggtattgtacattaccgcattaagctgaaccaattttccatcaacacgtctcagca 54338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 9e-43; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 126 - 398
Target Start/End: Original strand, 15063238 - 15063510
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||| |||||||||||| ||||||||| | || || ||||| ||| |||||||| |||  |||||| |||  |||| |||||||| ||| | || |||    
T  15063238 catcaatcaatatactaaaagtatacacattcggattaatgttgtccgatatcattctattaaacaaatcaacagcatatttcaatttaccaacaacgca 15063337  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     || |||| |||||||| | |||||||||| |||  |||| ||||||| |||| |||||||||| ||||||||||||||||||  ||||||||||||||     
T  15063338 aaagccactaattaaagaactataagtgactacatcaggagaaattcttttagaaaccatttcacaatataaatcaaaagcatcgttaacaagtttatcc 15063437  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaattcgtctca 398  Q
    || |||| || ||||||||||||| | ||||| ||||||| | | ||||||||||| |||||||  |||||||    
T  15063438 ttacacatactatcaataatcgtgctatacattaccacattaggccgaaccaattttccatcaacccgtctca 15063510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 15063126 - 15063159
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaa 49  Q
    |||||||||| |||||||||||||||||||||||    
T  15063126 caatatccatccattaaagagttataagtaacaa 15063159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 81; Significance: 6e-38; HSPs: 4)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 125 - 365
Target Start/End: Original strand, 105099 - 105339
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| |||||||||  |||||||||||||| ||||| ||||| ||| | |||||||| ||| |||||||||||||| | |||||    
T  105099 gcatcaaccaatatattaaaagtatacacatctgggttgatgtttttcaataccatttgatggaccaaaccaaatgcttctttcaattgaccaacaatgc 105198  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatc 324  Q
    | || ||| |||||| || | || ||||||||||||||||| ||||| |||| | || ||||||| | ||||| ||| | |||| | | |||||||||||    
T  105199 aaaacccataaattagagcactaaaagtgacaacagtaggagaaattttctttgtaatcatttcagagtataactcatatgcatcacttacaagtttatc 105298  T
Q  325 tttgcacacaccatcaataatcgtgttgtacatcaccacat 365  Q
    |||||||| || |||||| |  ||||| ||||| |||||||    
T  105299 tttgcacaaactatcaatgactgtgttatacattaccacat 105339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 125 - 366
Target Start/End: Complemental strand, 137012 - 136771
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| |||||  || ||||||||||||||| ||||| ||||| ||| |||||||||| ||| ||||||||| |||| | |||||    
T  137012 gcatcaaccaatatattaaaagtataatcatttgggttgatgtttttcaataccatttgatggaacaaaccaaatgcttctttcaatcgaccaacaatgc 136913  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatc 324  Q
    | || ||| | |||| || |||  |||||||||||  |||| ||||| |||| |||| ||||||| ||||||| ||| |||||| | | |||||||||||    
T  136912 aaaatccatagattagagaattgaaagtgacaacatcaggagaaattgtctttgcaatcatttcagaatataactcataagcatcaattacaagtttatc 136813  T
Q  325 tttgcacacaccatcaataatcgtgttgtacatcaccacatc 366  Q
    ||| |||| || |||||||||  || | ||||| ||||||||    
T  136812 tttacacaaactatcaataattatgctatacattaccacatc 136771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 139936 - 139764
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| ||||| |||  | |||||||||||| ||||| ||||| ||| ||||||| || ||||||||| |||||||| | ||| |    
T  139936 gcatcaaccaatatattaaaagtataaacatctcggttgatgtttttcaataccatttcatggaacaaacgaaatgcatctttgaattgaccaacaatac 139837  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataa 297  Q
    | || ||| | |||| || | |  |||||||||||  |||| ||||| |||| |||| ||||||| |||||||    
T  139836 aaaatccatagattagagaactgaaagtgacaacatcaggataaattttctttgcaatcatttcagaatataa 139764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 121832 - 121932
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||| ||||||  |||| ||||| | | ||||||||||||||| ||||| ||||| ||| |||||||||| ||| |||||||||||||| | |||||    
T  121832 gcatcaatcaatatggtaaaagtataaatatttgggttgatgtttttcaatagcatttcatggaacaaaccaaatgcttctttcaattgaccaacaatgc 121931  T
Q  225 a 225  Q
    |    
T  121932 a 121932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1840 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1840
Description:

Target: scaffold1840; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 342
Target Start/End: Complemental strand, 1044 - 830
Alignment:
Q  128 tcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcata 227  Q
    |||||||||||  |||| |||||||||  |||||||||||||| ||||| ||||| | | | |||||||| ||| ||||| |||||||| | ||||||      
T  1044 tcaaccaatatgttaaaagtatacacatctgggttgatgtttttcaataccatttcacggagcaaaccaaatgcttctttgaattgaccaacaatgcaat 945  T
Q  228 aaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatcttt 327  Q
    | ||| | |||| || |||   |||||||||||||||| |||||||||| | || ||||||| ||||||| ||| | |||| ||| ||||||||||||||    
T  944 atccatagattagagaattgagagtgacaacagtaggagaaattctctttgtaatcatttcagaatataactcatatgcatcatttacaagtttatcttt 845  T
Q  328 gcacacaccatcaat 342  Q
    ||||| |||||||||    
T  844 gcacaaaccatcaat 830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 128 - 342
Target Start/End: Complemental strand, 2866 - 2652
Alignment:
Q  128 tcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcata 227  Q
    |||||||||||  |||| |||||||||  |||||||||||||| ||||| ||||| | | | |||||||| ||| ||||| |||||||| | ||||||      
T  2866 tcaaccaatatgttaaaagtatacacatctgggttgatgtttttcaataccatttcacggagcaaaccaaatgcttctttgaattgaccaacaatgcaat 2767  T
Q  228 aaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatcttt 327  Q
    | ||| | |||| || |||   |||||||||||||||| |||||||||| | || ||||||| ||||||| ||| | |||| ||| ||||||||||||||    
T  2766 atccatagattagagaattgagagtgacaacagtaggagaaattctctttgtaatcatttcagaatataactcatatgcatcatttacaagtttatcttt 2667  T
Q  328 gcacacaccatcaat 342  Q
    ||||| |||||||||    
T  2666 gcacaaaccatcaat 2652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 5834 - 5653
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| ||||| ||| |||||||||| ||| ||| |||||||||| | |||||    
T  5834 gcatcaaccaatatattaaaagtatacacatttgggttgatgtttttcaataccatttcatggaacaaaccaaatgcttctatcaattgaccaacaatgc 5735  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagc 306  Q
    | || ||| | ||||||| |||  |||||||||||  |||| ||||| ||||  ||| ||||| | ||||||| ||| ||||    
T  5734 aaaatccatagattaaagaattgaaagtgacaacatcaggagaaattttctttacaatcatttgagaatataactcataagc 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 390
Target Start/End: Original strand, 43648 - 43913
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| ||||| ||| |||||||||| ||| ||| |||||||||| | || ||    
T  43648 gcatcaaccaatatattaaaagtatacacatttgggttgatgtttttcaataccatttcatggaacaaaccaaatgcttctatcaattgaccaacaaagc 43747  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatc 324  Q
    | || ||| | ||||||| |||  |||||||||||  |||| ||||| ||||  ||| ||||| | ||||||| ||| |||| |   | || | ||| ||    
T  43748 aaaatccatagattaaagaattgaaagtgacaacatcaggagaaattttctttacaatcatttgagaatataactcataagcctcggtcaccaatttctc 43847  T
Q  325 tttgcacacaccatcaataatcgtgttgtacatcaccacatcaagtcgaaccaatttcccatcaat 390  Q
    ||| |||| || ||||||||| ||||||| ||| | ||||| ||    ||||||||||||||||||    
T  43848 tttacacaaactatcaataattgtgttgtgcattaacacattaatgttaaccaatttcccatcaat 43913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 50865 - 50965
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| ||||| ||| |||||| |||||||  ||||| ||||| ||| ||||||| || ||| | ||||| |||||| | |||||    
T  50865 gcatcaaccaatatattaaaagtataaacatttgggtggatgtttgtcaatagcatttcatggaacaaacaaaatgcttttttcagttgaccaacaatgc 50964  T
Q  225 a 225  Q
    |    
T  50965 a 50965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 8633 - 8461
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||| |||| ||||| ||| ||||||||||||||| ||||| ||||| ||  ||||||| || ||||||||| |||||||| | ||| |    
T  8633 gcatcaaccaatatattaaaagtataaacatttgggttgatgtttttcaataccatttcattgaacaaacgaaatgcatctttgaattgaccaacaatac 8534  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataa 297  Q
    | || ||| | |||| || | |  ||||||||||||||||| ||||| |||| | || ||||||| |||||||    
T  8533 aaaatccatagattagagaactgaaagtgacaacagtaggagaaattgtctttgtaatcatttcagaatataa 8461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 118 - 297
Target Start/End: Original strand, 1574 - 1753
Alignment:
Q  118 acaaaatgcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgaccc 217  Q
    |||||| ||||| ||||||||| |||| |||||||||   ||||||||||||| ||||| |||||  || |||||||||| ||| ||||||| ||||||     
T  1574 acaaaaagcatcgaccaatatattaaaagtatacacatcagggttgatgtttttcaataccatttcgtgaaacaaaccaaatgcttctttcagttgacca 1673  T
Q  218 ataatgcataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataa 297  Q
    | |||||| || ||| |||| | || | || |||||||||||   ||| |||||||||| | || ||||||| |||||||    
T  1674 acaatgcaaaatccataaatcagagcactaaaagtgacaacatcgggagaaattctctttgtaatcatttcagaatataa 1753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 367
Target Start/End: Original strand, 44231 - 44472
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    |||||| ||| ||||||||||| || ||| | ||||||| ||||| |||  |||||  || ||||||||||| ||| ||||||| |||||||| |||  |    
T  44231 catcaatcaaaatactaaaggtgtaaacattggggttgacgtttttcaacgtcattcgatttaacaaaccaactgcttctttcatttgacccaaaataga 44330  T
Q  226 taaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatct 325  Q
     |||||| | |||| |||||| |||||||   ||  |||| ||||| ||||| ||| ||||||| ||||||||||| |  ||| | ||||||| ||||||    
T  44331 aaaaccatatattagagtattgtaagtgatggcatcaggataaattttcttaacaatcatttcagaatataaatcatacccatcactaacaagcttatct 44430  T
Q  326 ttgcacacaccatcaataatcgtgttgtacatcaccacatca 367  Q
    || || | ||  ||||| || ||||||||||| || ||||||    
T  44431 ttacagagactgtcaatgattgtgttgtacataacgacatca 44472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 297
Target Start/End: Original strand, 126484 - 126656
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    |||||||||| |||| |||| ||||| |||  |||||||||||||| |||||  |||| ||| ||||||| ||  |||||||| |||||||| | ||| |    
T  126484 gcatcaaccattatattaaaagtataaacatctgggttgatgtttttcaatactatttcatggaacaaacgaaacgcatctttgaattgaccaacaatac 126583  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataa 297  Q
    | || ||| |||||| || |||  ||||||||||| | ||| |||||||||| | || ||||||| |||||||    
T  126584 aaaatccataaattagagaattgaaagtgacaacattgggagaaattctctttgtaatcatttcagaatataa 126656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 3642675 - 3642503
Alignment:
Q  125 gcatcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgc 224  Q
    ||||||||||||||||| || ||||| |||  ||||||||| |||| ||||| ||||| ||| |||||||||| ||| |||||||||||||| | || ||    
T  3642675 gcatcaaccaatatactgaaagtataaacatctgggttgatatttttcaataccatttcatggaacaaaccaaatgcttctttcaattgaccaacaacgc 3642576  T
Q  225 ataaaccacaaattaaagtattataagtgacaacagtaggacaaattctcttagcaaccatttcataatataa 297  Q
    | || ||  | |||| || |||  |||||||||||   ||| |||||||||| | || ||||||| |||||||    
T  3642575 aaaatcccaagattagagaattgaaagtgacaacatcgggagaaattctctttgtaatcatttcagaatataa 3642503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 378
Target Start/End: Original strand, 44262991 - 44263207
Alignment:
Q  162 tgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgcataaaccacaaattaaagtattataagtgacaacagt 261  Q
    ||||||||| ||| | ||||| || ||||||||||| ||| ||||| |||||||||| ||| || || |||   |||| |||| ||||||||||||||      
T  44262991 tgatgtttttcaacaacatttgatttaacaaaccaactgcttctttaaattgacccacaatacaaaagccatgtattagagtagtataagtgacaacatc 44263090  T
Q  262 aggacaaattctcttagcaaccatttcataatataaatcaaaagcataattaacaagtttatctttgcacacaccatcaataatcgtgttgtacatcacc 361  Q
     ||| ||||||||||  ||| ||||||| || ||||| || | |||| | | | |||||||| |||||||| || || |||||| || |||||||| |||    
T  44263091 cggaaaaattctcttgacaatcatttcagaacataaagcagaggcatcaattataagtttatttttgcacaaactatgaataattgtattgtacatgacc 44263190  T
Q  362 acatcaagtcgaaccaa 378  Q
    |||| | | ||||||||    
T  44263191 acattaggccgaaccaa 44263207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 31667 - 31766
Alignment:
Q  126 catcaaccaatatactaaaggtatacacagttgggttgatgttttccaatatcattttatgtaacaaaccaattgcatctttcaattgacccataatgca 225  Q
    ||||||||||||| ||||| ||||| | |  |||||||||||||| ||||| ||||| | | |||||||||| ||| ||||| |||||||| | ||||||    
T  31667 catcaaccaatatgctaaaagtataaatatctgggttgatgtttttcaataccatttcacggaacaaaccaaatgcttctttgaattgaccaacaatgca 31766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 3886 - 3846
Alignment:
Q  16 caatatccattcattaaagagttataagtaacaatgttagg 56  Q
    |||||||||| |||||||||| |||||||||||| ||||||    
T  3886 caatatccatccattaaagagctataagtaacaacgttagg 3846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University