View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_high_57 (Length: 347)
Name: NF16177_high_57
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_high_57 |
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Alignment Details
Target: chr3 (Bit Score: 178; Significance: 6e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 153 - 330
Target Start/End: Original strand, 6027674 - 6027851
Alignment:
| Q |
153 |
ccatgatgaaggccttgatattttctctagttaatctaacctctgagttttcatcagcatagatatcaagtaaaatatcaagcaaatcactcactgtttc |
252 |
Q |
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| T |
6027674 |
ccatgatgaaggccttgatattttctctagttaatctaacctctgagttttcatcagcatagatatcaagtaaaatatcaagcaaatcactcactgtttc |
6027773 |
T |
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| Q |
253 |
aattccattactatttatttcctccttgtttttcttctttgtatcttcatgttccttcatgatcctctctattataac |
330 |
Q |
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| T |
6027774 |
aattccattactatttatttcctccttgtttttcttctttgtatcttcatgttccttcatgatcctctctattataac |
6027851 |
T |
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