View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_high_79 (Length: 288)
Name: NF16177_high_79
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_high_79 |
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Alignment Details
Target: chr7 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 40511429 - 40511160
Alignment:
| Q |
1 |
ttcagtgtcggcagcgttgacgacggaggaatcaaagctaccggatgaatcttccatctgaacgacggaggagagtggaagagaggaatcagcgttgaga |
100 |
Q |
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| T |
40511429 |
ttcagtgtcggcagcgttgacgacggaggaatcaaagctaccggatgaatcttccatctgaacgacggaggagagtggaagagaggaatcagcgttgaga |
40511330 |
T |
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| Q |
101 |
ttgagatccaacattgtgaggtttgagtttgttacgattcagttatgaagatttggagggaaaaatatatataaagcgagttttagttagttagaatgaa |
200 |
Q |
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| T |
40511329 |
ttgagatccaacattgtgaggtttgagtttgttacgattcagttatgaagatttggagggaaaaatatatataaagcgagttttagttagttagaatgaa |
40511230 |
T |
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| Q |
201 |
agagagagaaggatccaaaatgaaaatgcttcacttcattgttctcgtgaatgaactcagcttaattcct |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40511229 |
agagagagaaggatccaaaatgaaaatgcttcacttcattgttctcgtgaatgaactcagcttaattcct |
40511160 |
T |
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