View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_low_133 (Length: 201)
Name: NF16177_low_133
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_low_133 |
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Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 183
Target Start/End: Complemental strand, 45561937 - 45561767
Alignment:
| Q |
13 |
tccaagaatataccgatcacttaggttcgatgtagcctccatgactttgttaagaaggtgagaagtacctccattatcagtgaaatggacttgcttctta |
112 |
Q |
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| T |
45561937 |
tccaataatataccgatcacttaggttcgatgtagcctccatgactttgttaagaaggtgagaagtacctccattatcagtgaaatggacttgcttctta |
45561838 |
T |
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| Q |
113 |
gattttctgccataagaaaagaaataaactaatcccagaagaagcaaaacaacagatattgaggatcctag |
183 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45561837 |
gattttctgccataagaaaagaaataaactaatcccagaagaagcaaaacaacagatattgaggatcctag |
45561767 |
T |
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