View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16177_low_15 (Length: 562)

Name: NF16177_low_15
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16177_low_15
NF16177_low_15
[»] chr3 (44 HSPs)
chr3 (1-192)||(24506345-24506536)
chr3 (268-390)||(6462356-6462480)
chr3 (268-388)||(45877400-45877522)
chr3 (495-554)||(24506891-24506949)
chr3 (268-335)||(26043812-26043880)
chr3 (268-388)||(25294906-25295028)
chr3 (268-388)||(29127865-29127987)
chr3 (268-384)||(29135863-29135981)
chr3 (268-388)||(54261172-54261294)
chr3 (268-336)||(7650226-7650295)
chr3 (363-428)||(24506773-24506838)
chr3 (270-388)||(10040503-10040622)
chr3 (279-388)||(10855330-10855441)
chr3 (268-388)||(26207840-26207962)
chr3 (268-388)||(42412813-42412935)
chr3 (268-336)||(28572250-28572319)
chr3 (268-387)||(30767286-30767407)
chr3 (268-336)||(49198350-49198419)
chr3 (268-336)||(53649726-53649795)
chr3 (268-339)||(7328840-7328911)
chr3 (272-336)||(47749148-47749212)
chr3 (268-388)||(29762194-29762316)
chr3 (268-336)||(3507572-3507641)
chr3 (268-336)||(35315955-35316024)
chr3 (268-388)||(39849018-39849139)
chr3 (268-336)||(47219143-47219212)
chr3 (272-388)||(47471778-47471895)
chr3 (274-388)||(40944829-40944945)
chr3 (357-388)||(20948190-20948221)
chr3 (279-388)||(30045767-30045878)
chr3 (269-339)||(54237444-54237515)
chr3 (274-336)||(15795539-15795601)
chr3 (268-388)||(32873588-32873709)
chr3 (353-387)||(45402474-45402508)
chr3 (268-337)||(47303528-47303598)
chr3 (268-388)||(51682993-51683115)
chr3 (268-336)||(7139751-7139820)
chr3 (268-336)||(7310742-7310811)
chr3 (351-388)||(11687233-11687270)
chr3 (279-332)||(24506698-24506751)
chr3 (351-388)||(45450569-45450605)
chr3 (268-336)||(3136733-3136801)
chr3 (273-336)||(8362576-8362640)
chr3 (268-316)||(43330771-43330819)
[»] chr8 (25 HSPs)
chr8 (279-388)||(14666120-14666231)
chr8 (272-388)||(1013019-1013137)
chr8 (268-388)||(15884594-15884715)
chr8 (268-388)||(45521119-45521240)
chr8 (268-388)||(2467156-2467278)
chr8 (268-387)||(18373961-18374082)
chr8 (273-388)||(38922457-38922574)
chr8 (268-336)||(4479334-4479402)
chr8 (274-388)||(8141052-8141168)
chr8 (268-386)||(43032853-43032973)
chr8 (268-388)||(6100422-6100544)
chr8 (314-387)||(17981392-17981466)
chr8 (268-336)||(10927609-10927678)
chr8 (268-331)||(29933780-29933844)
chr8 (279-388)||(34846764-34846874)
chr8 (268-338)||(583815-583884)
chr8 (268-388)||(16893887-16894009)
chr8 (296-388)||(24837192-24837286)
chr8 (268-388)||(43027255-43027377)
chr8 (268-336)||(6042824-6042893)
chr8 (296-336)||(9860061-9860102)
chr8 (270-331)||(25848182-25848246)
chr8 (268-336)||(33935773-33935842)
chr8 (351-387)||(12753979-12754015)
chr8 (268-312)||(16291241-16291285)
[»] chr7 (28 HSPs)
chr7 (270-391)||(1797406-1797529)
chr7 (268-388)||(48804632-48804754)
chr7 (268-388)||(47341825-47341947)
chr7 (279-388)||(27875137-27875247)
chr7 (268-388)||(5039456-5039578)
chr7 (268-388)||(43862010-43862132)
chr7 (268-388)||(43925461-43925583)
chr7 (279-388)||(18785618-18785729)
chr7 (268-388)||(22573762-22573883)
chr7 (268-388)||(13095807-13095929)
chr7 (272-388)||(21530697-21530815)
chr7 (296-388)||(22268095-22268189)
chr7 (268-388)||(26423325-26423447)
chr7 (268-388)||(34659175-34659297)
chr7 (268-388)||(43346817-43346939)
chr7 (268-384)||(3353378-3353495)
chr7 (268-336)||(30827294-30827363)
chr7 (274-388)||(10047920-10048036)
chr7 (268-388)||(17748420-17748542)
chr7 (268-388)||(27028228-27028350)
chr7 (268-388)||(19914741-19914862)
chr7 (296-388)||(24969392-24969484)
chr7 (268-336)||(36619292-36619361)
chr7 (268-336)||(38578905-38578974)
chr7 (268-336)||(49142707-49142776)
chr7 (282-391)||(11607077-11607187)
chr7 (268-388)||(42210300-42210422)
chr7 (281-341)||(20247221-20247282)
[»] chr4 (28 HSPs)
chr4 (268-388)||(1446777-1446899)
chr4 (268-388)||(29895738-29895860)
chr4 (268-388)||(3574484-3574606)
chr4 (268-388)||(29588687-29588809)
chr4 (268-388)||(43458564-43458686)
chr4 (268-388)||(47078409-47078531)
chr4 (268-336)||(43468351-43468420)
chr4 (268-336)||(36262805-36262872)
chr4 (268-388)||(55920985-55921107)
chr4 (268-339)||(42722615-42722687)
chr4 (279-388)||(33647672-33647783)
chr4 (268-388)||(6779162-6779284)
chr4 (268-388)||(14123967-14124089)
chr4 (268-388)||(24166401-24166523)
chr4 (268-388)||(53599011-53599133)
chr4 (268-336)||(8889026-8889095)
chr4 (351-388)||(14567202-14567239)
chr4 (268-391)||(20421722-20421846)
chr4 (272-336)||(38075437-38075502)
chr4 (268-336)||(48015111-48015180)
chr4 (351-391)||(6032763-6032803)
chr4 (268-330)||(16450310-16450373)
chr4 (279-336)||(15732497-15732555)
chr4 (268-336)||(8064836-8064905)
chr4 (268-305)||(33109360-33109397)
chr4 (268-336)||(36145253-36145322)
chr4 (351-388)||(48317398-48317435)
chr4 (296-336)||(42722445-42722485)
[»] chr1 (21 HSPs)
chr1 (268-388)||(49078061-49078183)
chr1 (268-388)||(2980970-2981092)
chr1 (268-388)||(5855469-5855591)
chr1 (268-388)||(17642043-17642165)
chr1 (268-388)||(8763938-8764060)
chr1 (268-388)||(10422735-10422857)
chr1 (268-388)||(41663895-41664017)
chr1 (268-336)||(18915867-18915936)
chr1 (268-331)||(21849244-21849307)
chr1 (268-333)||(6563444-6563510)
chr1 (268-393)||(11397928-11398054)
chr1 (268-388)||(26325759-26325881)
chr1 (268-336)||(28324619-28324688)
chr1 (268-336)||(50503400-50503469)
chr1 (268-387)||(9659218-9659338)
chr1 (268-346)||(13262073-13262152)
chr1 (268-388)||(5503978-5504100)
chr1 (268-337)||(33498878-33498948)
chr1 (268-336)||(26660138-26660207)
chr1 (296-336)||(34334362-34334403)
chr1 (351-388)||(46929861-46929898)
[»] chr6 (17 HSPs)
chr6 (268-388)||(14107396-14107518)
chr6 (268-388)||(21898598-21898720)
chr6 (268-388)||(5253261-5253383)
chr6 (268-388)||(2271341-2271461)
chr6 (268-388)||(6606135-6606257)
chr6 (268-391)||(9147248-9147373)
chr6 (298-388)||(15643898-15643988)
chr6 (268-388)||(9179774-9179896)
chr6 (268-388)||(13036042-13036164)
chr6 (314-388)||(3030703-3030778)
chr6 (268-388)||(19089448-19089570)
chr6 (268-336)||(3587983-3588052)
chr6 (268-336)||(8932664-8932733)
chr6 (268-336)||(8944130-8944199)
chr6 (272-336)||(29333181-29333245)
chr6 (303-388)||(21016824-21016911)
chr6 (351-384)||(17115020-17115053)
[»] chr5 (28 HSPs)
chr5 (268-388)||(19572671-19572793)
chr5 (268-388)||(41163498-41163619)
chr5 (268-388)||(1538378-1538500)
chr5 (268-388)||(38897757-38897878)
chr5 (271-388)||(28857075-28857194)
chr5 (268-388)||(20525785-20525907)
chr5 (268-388)||(26077088-26077210)
chr5 (268-380)||(42861256-42861370)
chr5 (268-391)||(7308402-7308527)
chr5 (268-388)||(4016293-4016415)
chr5 (268-388)||(5731958-5732080)
chr5 (268-388)||(18136318-18136440)
chr5 (268-336)||(9805004-9805073)
chr5 (268-336)||(42291543-42291612)
chr5 (268-336)||(38369700-38369768)
chr5 (268-388)||(8513466-8513588)
chr5 (268-380)||(25417221-25417335)
chr5 (268-388)||(30995068-30995190)
chr5 (268-388)||(42086274-42086396)
chr5 (268-388)||(37263188-37263309)
chr5 (268-312)||(39099817-39099861)
chr5 (296-388)||(16755008-16755102)
chr5 (351-388)||(6767174-6767211)
chr5 (284-336)||(20692933-20692986)
chr5 (268-336)||(23383657-23383726)
chr5 (351-388)||(28856924-28856961)
chr5 (351-391)||(35813121-35813161)
chr5 (351-391)||(42292146-42292186)
[»] chr2 (29 HSPs)
chr2 (268-388)||(2550814-2550936)
chr2 (268-388)||(331447-331569)
chr2 (268-388)||(8410077-8410199)
chr2 (268-336)||(21180352-21180421)
chr2 (268-391)||(21286387-21286512)
chr2 (268-391)||(45263705-45263830)
chr2 (268-386)||(6358189-6358309)
chr2 (271-388)||(20612576-20612696)
chr2 (268-388)||(7747220-7747342)
chr2 (268-388)||(18902568-18902690)
chr2 (268-388)||(34356152-34356274)
chr2 (268-336)||(7787055-7787124)
chr2 (268-375)||(25540442-25540551)
chr2 (268-334)||(10669593-10669660)
chr2 (268-330)||(34722685-34722748)
chr2 (268-388)||(10026654-10026776)
chr2 (268-388)||(14169647-14169769)
chr2 (268-388)||(38005348-38005470)
chr2 (268-333)||(41031944-41032010)
chr2 (268-388)||(44139430-44139552)
chr2 (268-336)||(10823059-10823128)
chr2 (268-336)||(12455309-12455378)
chr2 (279-336)||(33005751-33005808)
chr2 (272-336)||(41220634-41220699)
chr2 (268-316)||(28525493-28525541)
chr2 (268-388)||(3643925-3644047)
chr2 (268-336)||(3811729-3811798)
chr2 (351-392)||(37560115-37560156)
chr2 (272-339)||(29653623-29653691)
[»] scaffold0291 (1 HSPs)
scaffold0291 (268-336)||(6857-6926)
[»] scaffold0341 (1 HSPs)
scaffold0341 (268-333)||(18637-18703)
[»] scaffold0005 (2 HSPs)
scaffold0005 (351-388)||(250136-250173)
scaffold0005 (271-336)||(271115-271181)
[»] scaffold0209 (1 HSPs)
scaffold0209 (268-338)||(12575-12644)
[»] scaffold0079 (1 HSPs)
scaffold0079 (282-336)||(8177-8231)
[»] scaffold0016 (1 HSPs)
scaffold0016 (268-336)||(8739-8808)


Alignment Details
Target: chr3 (Bit Score: 168; Significance: 9e-90; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 24506345 - 24506536
Alignment:
Q  1 ttgtgaccggaatactctctgctgtgaagattcttaaatgagaattgttcctccatggctttcgaaacactttttcgagacacggaaactgtgattgtcg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  24506345 ttgtgaccggaatactctctgctgtgaagattcttaaatgagaattgttcctccatggctttggaagcacttttacgagacacggaaactgtgattgtcg 24506444  T
Q  101 tacggattcgtgggtggaatcgaagctaagaattttgggaaacacttttgattcccgcgacgacactattggtttttcgtttcatttccaaa 192  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  24506445 tacggattcgtgggtggaatcgaagctaggaattttgggaaacacttttgattcccgctacgacactattggtttttcgtttcatatccaaa 24506536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 268 - 390
Target Start/End: Complemental strand, 6462480 - 6462356
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| |||||| ||||||||||||||||| || | |||| ||  ||||| ||||| |||    
T  6462480 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagctcctt 6462381  T
Q  366 gccactggagcccaagcaacttgat 390  Q
    |||||| ||||||||||||||||||    
T  6462380 gccactagagcccaagcaacttgat 6462356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 45877522 - 45877400
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||| |||||| |||||||||||||||| ||   |||| ||  ||||| | ||| |||    
T  45877522 aatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggctcctt 45877423  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  45877422 gccactggagcccaaacaacttg 45877400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 495 - 554
Target Start/End: Original strand, 24506891 - 24506949
Alignment:
Q  495 atgaagctgtcttgacatagttgttttaatgatgtagtcttgggttaatttgatgatgtc 554  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  24506891 atgaagttgtcttgacatagttgttttaatgatgt-gtcttgggttaatttgatgatgtc 24506949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 26043880 - 26043812
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtat 335  Q
    |||||||||| ||||||||| |||| | ||||||||||||||||| |||||||||||||||||||||||    
T  26043880 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 25295028 - 25294906
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgg-gaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||| ||||| |||| | |||||||||||||||||||||  | ||||| ||||||||||| ||   |||| ||  ||||| ||||| |||    
T  25295028 aatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtccttggaaggagctcctt 25294929  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  25294928 gccactggagcccaagcaacttg 25294906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 29127987 - 29127865
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||| |||||||||||| ||||||| ||||||||||| |||| || | |||| ||  ||||| || || |||    
T  29127987 aatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaacccgatattccccagatacgtccttggaaggatctcctt 29127888  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  29127887 gccactggagcccaaacaacttg 29127865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 384
Target Start/End: Complemental strand, 29135981 - 29135863
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  |||||||||||||| |||||||| ||   |||| ||  |||||  |||| |||    
T  29135981 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagctcctt 29135882  T
Q  366 gccactggagcccaagcaa 384  Q
    |||||||||||||||||||    
T  29135881 gccactggagcccaagcaa 29135863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 54261294 - 54261172
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| | ||| |||||||||||||||||| || |  ||| ||  ||||| ||||| |||    
T  54261294 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccaggtacgtccttggaaggagctcctt 54261195  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  54261194 gccactggagcccaaacaacttg 54261172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 7650295 - 7650226
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| |||||||||||||  |||||||||||||||||||  |||||| ||||||||||||||||    
T  7650295 aatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaacccggtatt 7650226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 428
Target Start/End: Original strand, 24506773 - 24506838
Alignment:
Q  363 cttgccactggagcccaagcaacttgattggccaaaatacctacttaggttatacaagattaatcc 428  Q
    ||||||| | ||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  24506773 cttgccattagagtccaaacaacttggttggccaaaatacctacttacgttatacaagattaatcc 24506838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 10040622 - 10040503
Alignment:
Q  270 tccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgcc 368  Q
    |||||||| ||||||||| |||| | |||||||||| |||||| ||||| |||||||||||| |||| ||    ||| ||  | ||| ||||| ||||||    
T  10040622 tccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgcc 10040523  T
Q  369 actggagcccaagcaacttg 388  Q
    ||||||||||||||||||||    
T  10040522 actggagcccaagcaacttg 10040503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 10855441 - 10855330
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagc 376  Q
    ||||||||| |||| |||||||||||| ||||||  |||||| |||| |||||||||||||| |  ||| ||  ||||| ||||| ||||||||||||||    
T  10855441 tgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggagctccttgccactggagc 10855342  T
Q  377 ccaagcaacttg 388  Q
    |||| |||||||    
T  10855341 ccaaacaacttg 10855330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 26207840 - 26207962
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| ||||   ||||| |||| |||||| ||| |||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  26207840 aatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagctcctt 26207939  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  26207940 gccactggagcccaagcaacttg 26207962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 42412813 - 42412935
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccct-gggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||| |||||| |||||| |||  ||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  42412813 aatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 42412912  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||| ||||||||||||||||||    
T  42412913 gccattggagcccaagcaacttg 42412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 28572250 - 28572319
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| ||||  ||||||||||| ||||||| ||||||||||||||||| |||||    
T  28572250 aatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaacccagtatt 28572319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 30767286 - 30767407
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| ||||   |||||||||||||||||  |||||| ||||||||||| |||| || |  ||| ||  ||||| || || |||    
T  30767286 aatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgatattccccaggtacatccttggaaggaactcctt 30767385  T
Q  366 gccactggagcccaagcaactt 387  Q
    ||||||||||||||||||||||    
T  30767386 gccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 49198419 - 49198350
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  |||| ||||||||||||||||||    
T  49198419 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtatt 49198350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 53649795 - 53649726
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| |||||||||||| | | |||||||||||||||||  ||||| |||||||||||||||||    
T  53649795 aatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtatt 53649726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 339
Target Start/End: Complemental strand, 7328911 - 7328840
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttcc 339  Q
    |||||||||| |||||| || |||| | ||||||||||||||||| ||| |||||||||||||||||||||||    
T  7328911 aatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcc 7328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 47749148 - 47749212
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||||| ||||||||| |||| | |||||||||| |||||| |||| ||||||||||||||||||    
T  47749148 cggctcgtgcgtagaggcatgcgcactggccaagagttgttcccctaggaatcgaacccggtatt 47749212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 29762194 - 29762316
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| ||| ||||| |||| | ||||||||||||||||| ||| || |||||| ||||| |||| ||   |||| ||  ||||| ||||| |||    
T  29762194 aatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattccccgaatacatccttggaaggagctcctt 29762293  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  29762294 gccactggagcccaagcaacttg 29762316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 3507572 - 3507641
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | ||||||||||||||||| || || |||||| |||||||||||    
T  3507572 aatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtatt 3507641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 35316024 - 35315955
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    ||||| |||| ||||||||| |||| | |||||||||||||||||  |||||||||||||||||| ||||    
T  35316024 aatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatatt 35315955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 39849139 - 39849018
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| ||||||||| ||||   |||||||||| |||||| | ||||||||||||||||  ||| ||    ||| ||  ||||| ||||| ||||    
T  39849139 aatccggctcatgcgtagaggcatgcacactggccaagcgttgttcctctgggaatcgaacccgaaattccctgagtacgtccttggaaggagctccttg 39849040  T
Q  367 ccactggagcccaagcaacttg 388  Q
    |||||||||||||||| |||||    
T  39849039 ccactggagcccaagcgacttg 39849018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 47219212 - 47219143
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | ||| |||||| |||||||||| ||||||||||||| ||||||    
T  47219212 aatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaacctggtatt 47219143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 47471895 - 47471778
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccac 370  Q
    |||||| ||||||||  |||| | ||| ||||||  ||||| ||||||||||||||||||||||| || |  ||| ||  ||||| |||||  |||||||    
T  47471895 cggctcatgcgtagaagcatgcgcactagccaagcattgttcccctgggaatcgaacccggtattccctaggtacgtccttggaaggagctctttgccac 47471796  T
Q  371 tggagcccaagcaacttg 388  Q
    | ||||||||||||||||    
T  47471795 tagagcccaagcaacttg 47471778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 40944945 - 40944829
Alignment:
Q  274 gctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccact 371  Q
    |||| ||||||||| ||||  ||||||  |||||||||| ||| |||||||||||| |||||||  |   |||| ||  ||||| ||||||||||||||     
T  40944945 gctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccacc 40944846  T
Q  372 ggagcccaagcaacttg 388  Q
    |||||||||||||||||    
T  40944845 ggagcccaagcaacttg 40944829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 388
Target Start/End: Original strand, 20948190 - 20948221
Alignment:
Q  357 gagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||||||||||||||||    
T  20948190 gagcttcttgccactggagcccaagcaacttg 20948221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 30045878 - 30045767
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatactctc-tggaatgagcttcttgccactggagc 376  Q
    |||||||||||||| | |||||||||| ||||||  |||| |||||||||||||||||| || || |||  || |  || |||||  |||||||| ||||    
T  30045878 tgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttgagc 30045779  T
Q  377 ccaagcaacttg 388  Q
    ||||||||||||    
T  30045778 ccaagcaacttg 30045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 339
Target Start/End: Complemental strand, 54237515 - 54237444
Alignment:
Q  269 atccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttcc 339  Q
    ||||||||| |||||||||||||| | |||| |||||||||||| ||||||  |||||| |||| |||||||    
T  54237515 atccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcgaccccgatatttcc 54237444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 15795539 - 15795601
Alignment:
Q  274 gctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||| ||||||||| |||| | |||| ||||| |||||| ||||||||||||||| |||||||    
T  15795539 gctcgtgcgtagaggcatgcgcactgaccaagcgttgttcccctgggaatcgaactcggtatt 15795601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 32873588 - 32873709
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| | ||||||| |||||| ||||| |||| |||||| ||||| ||||||||||| |||||| ||    ||| ||  ||||||||||| |||    
T  32873588 aatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcccggg-tacgtccttggaatgagctcctt 32873686  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  32873687 gccactggagcccaaacaacttg 32873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 353 - 387
Target Start/End: Original strand, 45402474 - 45402508
Alignment:
Q  353 gaatgagcttcttgccactggagcccaagcaactt 387  Q
    |||||||||||||||||||||||||||| ||||||    
T  45402474 gaatgagcttcttgccactggagcccaatcaactt 45402508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 47303528 - 47303598
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtattt 337  Q
    |||||||||| || |||||| |||||| |||| |||||||||||| | |||||||||| |||||| |||||    
T  47303528 aatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattt 47303598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 51682993 - 51683115
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| || | |||| |||| | ||||| |||| |||||| ||| ||||||||||||| |||||| ||   |||| ||| ||||| ||||| ||     
T  51682993 aatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggagctcctc 51683092  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  51683093 gccactggagcccaaacaacttg 51683115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 7139820 - 7139751
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    ||||| |||| |||||||||| ||||  ||||| |||||| |||| || |||||||||||||||||||||    
T  7139820 aatccagctcgtgcgtagagatatgtacactggtcaagtgatgttccctctgggaatcgaacccggtatt 7139751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 7310742 - 7310811
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| ||||   || || ||||||||||| || |||||||||||||||||||||    
T  7310742 aatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggtatt 7310811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 11687233 - 11687270
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  11687233 tggaaggagcttcttgccactggagcccaaacaacttg 11687270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 24506698 - 24506751
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccgg 332  Q
    ||||||||| |||||| ||||| |||| ||||||||||||  ||||||||||||    
T  24506698 tgcgtagaggcatgtgcactggtcaagcgttgtttccctgaaaatcgaacccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 45450569 - 45450605
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  45450569 tggaatgagct-cttgccactggagcccaagcaacttg 45450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 3136733 - 3136801
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||||| ||| ||||||||| |||| | |||| |||||||||||| |||||  ||||||| ||||||||    
T  3136733 aatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcccctgaaaatcgaatccggtatt 3136801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 336
Target Start/End: Complemental strand, 8362640 - 8362576
Alignment:
Q  273 ggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    ||||| ||||||||| |||| | |||||||||  ||||||||| |||||||| ||||||||||||    
T  8362640 ggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacccggtatt 8362576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 43330771 - 43330819
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc 316  Q
    |||||||||| ||||||||| |||| | ||||| |||||||||||||||    
T  43330771 aatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtttccc 43330819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 14666120 - 14666231
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagc 376  Q
    ||||||||| |||| | |||||||||||||||||| ||||||||||||||||||||||| ||   |||| ||  ||||||||||| ||||||||||||||    
T  14666120 tgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccactggagc 14666219  T
Q  377 ccaagcaacttg 388  Q
    ||||||||||||    
T  14666220 ccaagcaacttg 14666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 272 - 388
Target Start/End: Original strand, 1013019 - 1013137
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgcca 369  Q
    |||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||| ||   |||| ||  |||||  |||| |||||||    
T  1013019 cggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgcca 1013118  T
Q  370 ctggagcccaagcaacttg 388  Q
    |||||||||||||||||||    
T  1013119 ctggagcccaagcaacttg 1013137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 15884594 - 15884715
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| ||||||||| |||| | ||| ||||||||||||| ||||||||||||||||||||||| || |  ||| ||  ||||| ||||| |||     
T  15884594 aatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacccggtattccccaggtacgtccttggaaggagctcctta 15884693  T
Q  367 ccactggagcccaagcaacttg 388  Q
    |||||||||||||| |||||||    
T  15884694 ccactggagcccaatcaacttg 15884715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 45521240 - 45521119
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| ||||||||| |||| | ||||  ||||||||||| ||||||||||||||||||||||| ||    ||| ||  |||||||| || ||||    
T  45521240 aatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaacccggtattccccgggtacatccttggaatgaactccttg 45521141  T
Q  367 ccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||||||    
T  45521140 ccactggagcccaagcaacttg 45521119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 2467156 - 2467278
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||| |||||||||| | |||||||||| |||||| ||| ||| |||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  2467156 aatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaacccggtattccccggatacgtccttggaaggagctcctt 2467255  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  2467256 gccactggagcccaagcaacttg 2467278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 268 - 387
Target Start/End: Complemental strand, 18374082 - 18373961
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttcca--atatactctctggaatgagcttct 364  Q
    |||||||||| ||||||||| |||| | ||||| |||| |||||| |||||| |||||||||| |||||||||   ||||| ||| ||||||||||| ||    
T  18374082 aatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatata-tctttggaatgagctcct 18373984  T
Q  365 tgccactggagcccaagcaactt 387  Q
    ||||| |||||||||| ||||||    
T  18373983 tgccattggagcccaaacaactt 18373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 388
Target Start/End: Original strand, 38922457 - 38922574
Alignment:
Q  273 ggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccac 370  Q
    ||||| |||||| || |||| | |||||||||| |||||| || ||||||||||||||||||||| ||    ||| ||  ||||| ||||| ||||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 38922556  T
Q  371 tggagcccaagcaacttg 388  Q
    ||||||||||||||||||    
T  38922557 tggagcccaagcaacttg 38922574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 4479334 - 4479402
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    ||||| |||| ||||||||| |||| | |||||||||| |||||| |||||||||||||| ||||||||    
T  4479334 aatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcccctgggaatcgaatccggtatt 4479402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 388
Target Start/End: Complemental strand, 8141168 - 8141052
Alignment:
Q  274 gctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccact 371  Q
    |||| ||||||||| |||| | |||||||||| |||||||||| ||| |||||||||||||||| ||   |||| ||  |||||  |||| |||||||||    
T  8141168 gctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccact 8141069  T
Q  372 ggagcccaagcaacttg 388  Q
    ||||||||| |||||||    
T  8141068 ggagcccaaacaacttg 8141052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 386
Target Start/End: Complemental strand, 43032973 - 43032853
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| || |||||| |||| | |||||||||| |||||| ||| ||||||||||| ||| ||||||| | |||| | | ||||| || || |||    
T  43032973 aatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatatttcccagatacatttttggaaggaactcctt 43032874  T
Q  366 gccactggagcccaagcaact 386  Q
    ||||||||||||||| |||||    
T  43032873 gccactggagcccaaacaact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 6100544 - 6100422
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||| | |||| | |||||||||| |||||| | |||||||||||||||||||||| ||   |||| ||  || || ||||| |||    
T  6100544 aatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttgaaaggagctcctt 6100445  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||| ||||||| |||||||    
T  6100444 gccactgaagcccaaacaacttg 6100422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 387
Target Start/End: Complemental strand, 17981466 - 17981392
Alignment:
Q  314 ccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaactt 387  Q
    ||||||||||||||||||||||||||    ||| ||  ||||| ||||| |||||||||||||||||||||||||    
T  17981466 ccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 10927678 - 10927609
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| | ||| ||||||||||||||||||    
T  10927678 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtatt 10927609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 331
Target Start/End: Complemental strand, 29933844 - 29933780
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccg 331  Q
    |||||||||| | ||||||| |||||  ||||| ||||||||||| |||||||||||||||||||    
T  29933844 aatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg 29933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 34846874 - 34846764
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagc 376  Q
    ||||||||| ||||  ||||||||||| ||||||  || |||||||||||||||||||| ||    ||| ||  ||||||||||| ||||||||||||||    
T  34846874 tgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattcccggg-tacgtccttggaatgagctccttgccactggagc 34846776  T
Q  377 ccaagcaacttg 388  Q
    |||| |||||||    
T  34846775 ccaaacaacttg 34846764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 583884 - 583815
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttc 338  Q
    |||||| ||| ||||||||| |||| | ||||| |||| |||||| |||| ||||||||||||||||||||    
T  583884 aatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt-ccctaggaatcgaacccggtatttc 583815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 16894009 - 16893887
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| |||||| || ||||||||||||||||| ||| ||  ||||| |||||||||||| |||| ||   |||| ||  ||||| ||| | |||    
T  16894009 aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaacccgatattccccggatacgtcattggaaggagttcctt 16893910  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||  |||||||||||||||    
T  16893909 gccactatagcccaagcaacttg 16893887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 388
Target Start/End: Complemental strand, 24837286 - 24837192
Alignment:
Q  296 actggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatactctct-ggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    |||||||||| |||||| |||||||||||||||| ||||||| ||    |||   || |||| ||||| ||||||||||||||||||||||||||    
T  24837286 actggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttggaaggagctccttgccactggagcccaagcaacttg 24837192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 43027377 - 43027255
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatactctctggaa-tgagcttctt 365  Q
    |||||||||| ||||||||| |||| | | ||| |||  |||||| | |||||||||||||||| ||||| || | ||||  ||| ||| ||||||  ||    
T  43027377 aatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtattccccaaatacgttcttgaaatgagctcatt 43027278  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  43027277 gccactggagcccaaacaacttg 43027255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 6042893 - 6042824
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccct-gggaatcgaacccggtatt 336  Q
    |||||||||| |||||  || |||| | |||||||||| |||||| |||| |||||||||||||||||||    
T  6042893 aatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtatt 6042824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 9860061 - 9860102
Alignment:
Q  296 actggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  9860061 actggccaagtgttgttccccctgggaatcgaacccggtatt 9860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 331
Target Start/End: Complemental strand, 25848246 - 25848182
Alignment:
Q  270 tccggctcctgcgtagagacatgtgtactggccaa--gtgttgtttc-cctgggaatcgaacccg 331  Q
    |||| ||| |||||||||||||||| |||| ||||  |||||||||| |||||||||||||||||    
T  25848246 tccgactcatgcgtagagacatgtgcactgaccaagtgtgttgtttctcctgggaatcgaacccg 25848182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 33935773 - 33935842
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||| ||| |||||| || |||| | ||||||||||||||||| ||||| ||||||||| ||||||||    
T  33935773 aatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtatt 33935842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 387
Target Start/End: Complemental strand, 12754015 - 12753979
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaactt 387  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  12754015 tggaatgagcttcttgccacttgagtccaagcaactt 12753979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 16291241 - 16291285
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt 312  Q
    ||||| |||| ||| ||||| ||||||||||||||||||||||||    
T  16291241 aatccagctcatgcatagaggcatgtgtactggccaagtgttgtt 16291285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 6e-23; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 270 - 391
Target Start/End: Complemental strand, 1797529 - 1797406
Alignment:
Q  270 tccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgc 367  Q
    |||||||| |||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||| |    |||| ||  ||||| ||||| |||||    
T  1797529 tccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgc 1797430  T
Q  368 cactggagcccaagcaacttgatt 391  Q
    ||||||||||||||||||||||||    
T  1797429 cactggagcccaagcaacttgatt 1797406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 48804754 - 48804632
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||||||||||||||||| ||| |||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  48804754 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 48804655  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  48804654 gccactggagcccaagcaacttg 48804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 47341947 - 47341825
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| ||||||||| |||| | ||||||||||||||||| ||| |||||||||||| ||||||| ||    ||| ||  ||||||||||| |||    
T  47341947 aatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctcctt 47341848  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  47341847 gccactggagcccaagcaacttg 47341825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 279 - 388
Target Start/End: Original strand, 27875137 - 27875247
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagc 376  Q
    ||||||||| |||||| |||||||||||||| || ||| ||||||||||| |||||||| || | |||| ||| ||||| ||||| ||||||||||||||    
T  27875137 tgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattccccagatacgtct-tggaaggagctacttgccactggagc 27875235  T
Q  377 ccaagcaacttg 388  Q
    |||| |||||||    
T  27875236 ccaaacaacttg 27875247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 5039456 - 5039578
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| |||||||||  ||||| |||| |||||||||||| | ||| |||||||||| ||||||| ||   |||| ||| ||||| ||||| |||    
T  5039456 aatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccgaatacatctatggaaggagctcctt 5039555  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  5039556 gccactggagcccaaacaacttg 5039578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 43862010 - 43862132
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||  |||||| ||| |||||||||||||||||||| || | |||| ||| ||||| ||||| |||    
T  43862010 aatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagctcctt 43862109  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||| || |||||||| |||||||    
T  43862110 gccgctagagcccaaacaacttg 43862132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 43925583 - 43925461
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| ||||||||| |||| | |||| |||||||||||| ||| |||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  43925583 aatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 43925484  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  43925483 gccactggagcccaagcaacttg 43925461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 18785729 - 18785618
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagc 376  Q
    ||||||||| |||| | |||||||||||||||||  |||| |||||||||||||||||| ||    ||| ||  ||||| ||||||||||||||||||||    
T  18785729 tgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagc 18785630  T
Q  377 ccaagcaacttg 388  Q
    ||| ||||||||    
T  18785629 ccatgcaacttg 18785618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 22573883 - 22573762
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttcc--aatatactctctggaatgagcttctt 365  Q
    |||||||||| |||||| || |||| | ||||| ||| ||||||| |||||  ||||||||||| |||| ||  |||||| ||| |||||  ||||||||    
T  22573883 aatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcgaacccgatattcccccaatata-tctttggaagaagcttctt 22573785  T
Q  366 gccactggagcccaagcaacttg 388  Q
    || ||||||||||||||||||||    
T  22573784 gctactggagcccaagcaacttg 22573762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 13095929 - 13095807
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  |||||||||| |||||||||||| ||    ||| ||  || || ||||| |||    
T  13095929 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggtattccccgggtacgtccttgaaaggagctcctt 13095830  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||| |||||||||||||||||    
T  13095829 gccacgggagcccaagcaacttg 13095807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 272 - 388
Target Start/End: Complemental strand, 21530815 - 21530697
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgcca 369  Q
    |||||| ||||||||| |||||| |||| ||||||||||||  ||||||||||| ||||| ||||| || |  ||| ||  ||||| ||||| |||||||    
T  21530815 cggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagtattccccaggtacgtccttggaaggagctccttgcca 21530716  T
Q  370 ctggagcccaagcaacttg 388  Q
    |||||||| ||||||||||    
T  21530715 ctggagccgaagcaacttg 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 296 - 388
Target Start/End: Original strand, 22268095 - 22268189
Alignment:
Q  296 actggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||| ||||||| ||| |||||||||||||||||||| || |  ||| ||  ||||||||||| |||||||||||||||||| |||||||    
T  22268095 actggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaacttg 22268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 26423325 - 26423447
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| ||||||||| || ||| |||||||||| |||||||||| |||||||||||||||||||| |     ||| ||  ||||| ||| |||||    
T  26423325 aatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagtttctt 26423424  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  26423425 gccactggagcccaaacaacttg 26423447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 34659297 - 34659175
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgg-gaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||||| |||| |||||| |||| | ||||||||||||||||| ||    ||| || |||||| ||||| |||    
T  34659297 aatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctggaaggagctcctt 34659198  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  34659197 gccactggagcccaaacaacttg 34659175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 43346817 - 43346939
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| | ||||||| |||| | || |||||||||||||| ||| || |||| |||||||||||| || | |||| ||| ||||| ||||| |||    
T  43346817 aatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggtattccccagatacgtctttggaaggagctcctt 43346916  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||| |||| |||||||    
T  43346917 gccactggagtccaaacaacttg 43346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 384
Target Start/End: Complemental strand, 3353495 - 3353378
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| ||||||||| |||| | ||||||||| ||||||||||||| ||||||| |||| |||| || | |||| ||  |  |||||||| ||||    
T  3353495 aatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttccctgagaatcgatcccgatattccctagatacgtccttataatgagctccttg 3353396  T
Q  367 ccactggagcccaagcaa 384  Q
    |||||| || ||||||||    
T  3353395 ccactgcaggccaagcaa 3353378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 30827363 - 30827294
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| ||||||||||||||||||| ||||||  ||||||||| ||||||    
T  30827363 aatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtatt 30827294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 388
Target Start/End: Original strand, 10047920 - 10048036
Alignment:
Q  274 gctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccact 371  Q
    |||| ||||||||| | || | ||||||||||||||||| ||| |||||||||||||||||||| ||   |||| ||  ||||| ||||| |||||||||    
T  10047920 gctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctccttgccact 10048019  T
Q  372 ggagcccaagcaacttg 388  Q
    ||||  |||||||||||    
T  10048020 ggagttcaagcaacttg 10048036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 17748420 - 17748542
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| | ||||||| |||| | |||||||||| |||||| ||| |||||||||||||||||||| ||   |||| ||  |||||  |||| |||    
T  17748420 aatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagctgctt 17748519  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||| |||||||| |||||||    
T  17748520 gccactagagcccaaacaacttg 17748542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 27028350 - 27028228
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatactctc-tggaatgagcttctt 365  Q
    ||||| |||| || |||||| |||| | |||||||||||||||||  |||||| ||||||||| ||||||||| |  |||  || ||||||||||| |||    
T  27028350 aatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtatttcccaggtacgttcttggaatgagctcctt 27028251  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||| |||| |||| |||||||    
T  27028250 gccaccggagtccaaacaacttg 27028228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 19914741 - 19914862
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||| ||||| ||||||||| |||| | | |||||||| |||||| |  |||||||||||||| ||||| |  |  ||| ||  ||||| ||||| ||||    
T  19914741 aatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcctttgggaatcgaacccagtattccttaggtacgtccttggaaggagctccttg 19914840  T
Q  367 ccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||||||    
T  19914841 ccactggagcccaagcaacttg 19914862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 296 - 388
Target Start/End: Original strand, 24969392 - 24969484
Alignment:
Q  296 actggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||||||||||| |||||| ||||||||||||||||| | | |||| ||  || ||  |||| |||||||||||||||||| |||||||    
T  24969392 actggccaagtgttgtt-ccctggaaatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 36619292 - 36619361
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| ||||   ||||| ||||||||||| ||| ||||||||||||||||||||    
T  36619292 aatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtatt 36619361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 38578905 - 38578974
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| ||| ||||||||||||||| ||||    
T  38578905 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatatt 38578974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 49142707 - 49142776
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||||| |||||| ||| |||||| ||| | ||||||||||||||||||    
T  49142707 aatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtatt 49142776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 391
Target Start/End: Complemental strand, 11607187 - 11607077
Alignment:
Q  282 gtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaa 380  Q
    |||||| |||||| |||||  |||||||||| ||| | |||||||| ||| |||| ||   |||| ||  ||||| ||| | ||||||||||||||||||    
T  11607187 gtagagtcatgtgcactggttaagtgttgttccccagagaatcgaatccgatattccccgaatacgtccttggaaggagttccttgccactggagcccaa 11607088  T
Q  381 gcaacttgatt 391  Q
    |||||||||||    
T  11607087 gcaacttgatt 11607077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 42210300 - 42210422
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||  ||||||| | |||||||||||| |||||||| |    |||| ||  ||||| ||||| |||    
T  42210300 aatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctcctt 42210399  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||| | ||||||||||    
T  42210400 gccactggagtctaagcaacttg 42210422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 20247221 - 20247282
Alignment:
Q  281 cgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaa 341  Q
    ||||||||||||||||||| ||||| |||||| ||| || |||||||||| |||||| ||||    
T  20247221 cgtagagacatgtgtactgcccaagcgttgttccccatgagaatcgaacctggtattcccaa 20247282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 1446899 - 1446777
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  1446899 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 1446800  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  1446799 gccactggagcccaagcaacttg 1446777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 29895860 - 29895738
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  29895860 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 29895761  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  29895760 gccactggagcccaagcaacttg 29895738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 3574484 - 3574606
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||| ||| ||||||||| |||| | ||||||||||||||||| ||||||||||| |||| ||||||| || |  ||| ||  ||||| ||||| |||    
T  3574484 aatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggagctcctt 3574583  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  3574584 gccactggagcccaagcaacttg 3574606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 29588809 - 29588687
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||| ||||||  ||||||||| |||||||||||||||||||||||     || ||| ||||||||||| |||    
T  29588809 aatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctcctt 29588710  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  29588709 gccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 43458686 - 43458564
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| | ||||||| |||| | |||||||||| ||| || | ||||||||||||| || ||||| || | |||| ||  |||||||||||||||    
T  43458686 aatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagcttctt 43458587  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  43458586 gccactggagcccaagcaacttg 43458564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 47078531 - 47078409
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||||| |||||||||| |||||| ||| |||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  47078531 aatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 47078432  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||| |||||||||||||    
T  47078431 gccactggaacccaagcaacttg 47078409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 43468420 - 43468351
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| |||||||||| ||||| |||||||||| |||||| ||| ||||||||||||||||||||    
T  43468420 aatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtatt 43468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 36262805 - 36262872
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||||| ||| ||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||||    
T  36262805 aatccgactcgtgcgtagaggcatgtgcactggccaagcgttgtt-ccctgggaatcgaacccggtatt 36262872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 55921107 - 55920985
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| | ||||||| |||| | |||| |||||||||||| ||| |||||||||||||||||||| ||    | | ||  ||||| ||||| |||    
T  55921107 aatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctcctt 55921008  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  55921007 gccactggagcccaagcaacttg 55920985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 42722615 - 42722687
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttcc 339  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| | ||||||||| |||||||||||||||    
T  42722615 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaacccggtatttcc 42722687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 388
Target Start/End: Complemental strand, 33647783 - 33647672
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagc 376  Q
    |||||||||  ||||| ||||| |||| |||||| ||||||| |||||||||||||||| || | |||| ||  || || ||||| ||||||||| ||||    
T  33647783 tgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagctccttgccactagagc 33647684  T
Q  377 ccaagcaacttg 388  Q
    ||||||||||||    
T  33647683 ccaagcaacttg 33647672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 6779284 - 6779162
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||| ||||| |||| | |||||||| |||||||| ||| ||||||||||||||||||||  | |  ||| ||  |||||  |||| |||    
T  6779284 aatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttggaagaagctcctt 6779185  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  6779184 gccactggagcccaaacaacttg 6779162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 14124089 - 14123967
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatactctc-tggaatgagcttctt 365  Q
    |||||||||| || |||||| |||| | ||||||||| ||||||| ||| ||||||||||||| |||||| |  |  |||  || ||||| |||||||||    
T  14124089 aatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattcctcaagtacgttcttggaaggagcttctt 14123990  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||| |||||||||| |||||||    
T  14123989 gccattggagcccaaacaacttg 14123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 24166523 - 24166401
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| ||||||||| |||| | |||||||||  |||||||||| |||||||||||||| ||||| ||    ||| ||  ||||| ||||| |||    
T  24166523 aatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagctcctt 24166424  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  24166423 gccactggagcccaatcaacttg 24166401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 53599133 - 53599011
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||  |||||| | |||||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  53599133 aatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 53599034  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||| |||||||||| |||||||    
T  53599033 gccaatggagcccaaacaacttg 53599011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 8889095 - 8889026
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||| ||||||||||||  |||| ||||||||||||||||||    
T  8889095 aatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggtatt 8889026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 388
Target Start/End: Complemental strand, 14567239 - 14567202
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  14567239 tggaatgagctccttgccactggagcccaagcaacttg 14567202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 20421846 - 20421722
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| ||||||||| |||| | ||||||||||||||||| ||| ||| ||||||||| | |||| || | |||| ||| || || ||||| |||    
T  20421846 aatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaaccag-tattccccagatacgtctttgaaaggagctcctt 20421748  T
Q  366 gccactggagcccaagcaacttgatt 391  Q
    ||||||| ||||||||||||| ||||    
T  20421747 gccactgaagcccaagcaactagatt 20421722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 38075502 - 38075437
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||| ||||||||| |||| | |||||||||| |||||||||| || |||||||||||||||||    
T  38075502 cggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtatt 38075437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 48015111 - 48015180
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| | || | |||||||||| |||||| || |||||||||||||||||||||    
T  48015111 aatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtatt 48015180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 6032763 - 6032803
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttgatt 391  Q
    ||||| ||||| |||||||||||||||||||||||||||||    
T  6032763 tggaaggagctccttgccactggagcccaagcaacttgatt 6032803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 16450373 - 16450310
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaaccc 330  Q
    |||| ||||| ||||||||| |||||| |||||||||| |||||| ||| ||||||||||||||    
T  16450373 aatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 336
Target Start/End: Original strand, 15732497 - 15732555
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    ||||||||| |||||| ||||||||||||||||| ||| |  |||||||||||||||||    
T  15732497 tgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtatt 15732555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 8064836 - 8064905
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccct-gggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | ||||| |||||||| || |||| ||||||||||||| |||||    
T  8064836 aatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtatt 8064905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 305
Target Start/End: Complemental strand, 33109397 - 33109360
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaag 305  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  33109397 aatccggctcgtgcgtagagacatgcgtactggccaag 33109360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 36145253 - 36145322
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| || |||||| |||| | ||||  |||| |||||||||| ||||||||||||||||||||    
T  36145253 aatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtatt 36145322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 48317398 - 48317435
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    |||||||||||  |||||||||||||||||||||||||    
T  48317398 tggaatgagctctttgccactggagcccaagcaacttg 48317435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 42722445 - 42722485
Alignment:
Q  296 actggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    ||||| ||||||||||| ||||||||||| |||||||||||    
T  42722445 actggtcaagtgttgttcccctgggaatcaaacccggtatt 42722485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 49078183 - 49078061
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||| ||||||||||||||||||||||| ||   |||| ||  | ||| ||||| |||    
T  49078183 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagctcctt 49078084  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  49078083 gccactggagcccaagcaacttg 49078061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 2980970 - 2981092
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||| ||| ||||||||| ||||   ||||||||||||||||| || ||||||||||||||| ||||| ||   |||| || |||||| ||||| |||    
T  2980970 aatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagctcctt 2981069  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||| ||||||||||||||||    
T  2981070 gccactagagcccaagcaacttg 2981092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 5855591 - 5855469
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||| ||| ||||||||| |||| | |||||||||| |||||| | |||||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  5855591 aatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagctcctt 5855492  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  5855491 gccactggagcccaaacaacttg 5855469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 17642043 - 17642165
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||||||||| ||||||||    ||| ||  ||||| ||||| |||    
T  17642043 aatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccagtatttcctgggtacgtccgtggaaggagctcctt 17642142  T
Q  366 gccactggagcccaagcaacttg 388  Q
    | ||||||||||||| |||||||    
T  17642143 gtcactggagcccaaacaacttg 17642165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 8764060 - 8763938
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||| |||||||| |||| ||    ||| ||  ||||| ||||| |||    
T  8764060 aatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaacccgatattccccgggtacgtccttggaaggagctcctt 8763961  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||| |||||||||||||||||    
T  8763960 gccacgggagcccaagcaacttg 8763938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 10422857 - 10422735
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||||||||||||||||| | ||| | |||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  10422857 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattggaaggagctcctt 10422758  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||| ||||||| |||||||    
T  10422757 gccactgtagcccaaacaacttg 10422735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 41663895 - 41664017
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| ||||||||| |||| | |||| |||||||||||| ||| |||||||||||||||||||| ||   |||| ||  | ||| ||||| |||    
T  41663895 aatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttagaaggagctcctt 41663994  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  41663995 gccactggagcccaaacaacttg 41664017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 18915936 - 18915867
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| ||||   |||||||||||||||||  |||||||||||||||||||||||    
T  18915936 aatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtatt 18915867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 331
Target Start/End: Original strand, 21849244 - 21849307
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccg 331  Q
    |||||||||| ||||||||| |||| | ||| |||||| |||||| ||||||||||||||||||    
T  21849244 aatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 6563510 - 6563444
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggt 333  Q
    |||| ||||| |||||||||||||||| |||||||||| ||||||  |||| |||||||||||||||    
T  6563510 aatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 6563444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 11397928 - 11398054
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||| ||| ||||||||| |||  | | |||||||  |||||| |||| ||||||||||||||||||  |   |||| ||  ||||| ||||| ||||    
T  11397928 aatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcggaatcgaacccggtattctccggatacatccttggaaggagctccttg 11398027  T
Q  367 ccactggagcccaagcaacttgattgg 393  Q
    |||||||||||||||||||||| ||||    
T  11398028 ccactggagcccaagcaacttggttgg 11398054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 26325881 - 26325759
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||| |||||||||||| || |||||||||||||||| |||| |    |||| ||  || || ||||| |||    
T  26325881 aatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcctt 26325782  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||| |||||||||    
T  26325781 gccactggagccctagcaacttg 26325759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 28324619 - 28324688
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||| ||||||||||||| ||| |||||||||||||| ||||    
T  28324619 aatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatatt 28324688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 50503400 - 50503469
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | ||||| |||||||||||  |||||||||||||||||| ||||    
T  50503400 aatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatatt 50503469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 387
Target Start/End: Original strand, 9659218 - 9659338
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| |||||| || |||| | ||| | |||  |||||| ||||||||||||||||||||||| ||    ||| ||  | ||||||||| ||||    
T  9659218 aatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaatcgaacccggtattccccgagtacgtccttagaatgagctccttg 9659317  T
Q  367 ccactggagcccaagcaactt 387  Q
    ||||||||||| |||||||||    
T  9659318 ccactggagcctaagcaactt 9659338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 268 - 346
Target Start/End: Complemental strand, 13262152 - 13262073
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac 346  Q
    |||||| ||| |||||||||||||| ||| || ||||  |||||| ||||||| |||||||||||||||| || ||||||    
T  13262152 aatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattccccatatac 13262073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 5504100 - 5503978
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatttccaatatactctct-ggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||||| |||   |||| ||||||| ||||| |||||||||| | |||| || | ||||  ||| |||| ||||| |||    
T  5504100 aatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacctgatattccccagatacgttctcggaaggagctcctt 5504001  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||| ||||| |||||||    
T  5504000 gccactggaacccaaacaacttg 5503978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 33498878 - 33498948
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtattt 337  Q
    |||||||||| ||||||||| |||| | |||||||||| |||| | | |||| ||||||||||||||||||    
T  33498878 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattt 33498948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 26660207 - 26660138
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| ||||||  ||| ||||||| ||| ||| ||||||||||||||||    
T  26660207 aatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtatt 26660138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 34334362 - 34334403
Alignment:
Q  296 actggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  34334362 actggccaagtgttgttccccctgggaatcgaacccggtatt 34334403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 46929861 - 46929898
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  46929861 tggaaggagcttcttgccactagagcccaagcaacttg 46929898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 6e-20; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 14107396 - 14107518
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||||| ||||| |||| |||||| | |||||||||||||||||||||| ||   |||| ||| ||||| ||||| |||    
T  14107396 aatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtctttggaaggagctcctt 14107495  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  14107496 gccactggagcccaaacaacttg 14107518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 21898720 - 21898598
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| | |||||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  21898720 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 21898621  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  21898620 gccactggagcccaagcaacttg 21898598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 5253261 - 5253383
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  5253261 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 5253360  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||| ||||||||||||||||||    
T  5253361 gccattggagcccaagcaacttg 5253383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 2271341 - 2271461
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| |||||||||||||| | |||||| ||| |||| ||| ||| ||||||||||||||||| ||   |||| ||  ||||| ||||| ||||    
T  2271341 aatccggctcgtgcgtagagacatgcgcactggctaagcgttg-ttctctgagaatcgaacccggtattccccgaatacgtccttggaaggagctccttg 2271439  T
Q  367 ccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||||||    
T  2271440 ccactggagcccaagcaacttg 2271461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 6606135 - 6606257
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||||  |||||||||||||||||  ||||| ||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  6606135 aatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaacccggtattccccggatacgtccttggaaggagctcctt 6606234  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||  ||||||||||||||    
T  6606235 gccactgtggcccaagcaacttg 6606257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 9147373 - 9147248
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||  ||||||||| |||||| ||||| ||||||| ||| ||| ||||||||||||||| |||| || |  ||| ||  ||||||||||| |||    
T  9147373 aatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctcctt 9147274  T
Q  366 gccactggagcccaagcaacttgatt 391  Q
     |||||||||||||| ||||||||||    
T  9147273 cccactggagcccaaacaacttgatt 9147248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 298 - 388
Target Start/End: Original strand, 15643898 - 15643988
Alignment:
Q  298 tggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||| ||||||||| ||||| |||||||||||| |||| |||  |||| ||  ||||||||||| ||||||||||||||||||||||||||    
T  15643898 tggcctagtgttgttcccctgtgaatcgaacccgttattcccag-atacgtccttggaatgagctccttgccactggagcccaagcaacttg 15643988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 9179774 - 9179896
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| |||||||||  |||  |||||| ||||||||||| ||| |||||||||||||||||||| ||    ||| ||  ||||||||||| |||    
T  9179774 aatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttggaatgagctcctt 9179873  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  9179874 gccactggagcccaaacaacttg 9179896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 13036042 - 13036164
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| ||||||||| |||| | ||||||||||||||||| ||| ||  ||||||||||| |||| ||   |||| ||  ||||| ||||| |||    
T  13036042 aatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagctcctt 13036141  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  13036142 gccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 388
Target Start/End: Original strand, 3030703 - 3030778
Alignment:
Q  314 ccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    |||||||||||||||||| |||| || | |||| ||  ||||||||||| |||||||||||||||||| |||||||    
T  3030703 ccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttg 3030778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 19089570 - 19089448
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| ||||   |||||||||||||||||  ||||||||||| |||| |||||| |    |||| ||  || |||||||| |||    
T  19089570 aatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaacctggtattcctcggatacgtccttgaaatgagctcctt 19089471  T
Q  366 gccactggagcccaagcaacttg 388  Q
    || ||||||||||||||||||||    
T  19089470 gcgactggagcccaagcaacttg 19089448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 3587983 - 3588052
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccct-gggaatcgaacccggtatt 336  Q
    ||||||| || |||||||||  ||||| |||||||||| |||||| |||| |||||||||||||||||||    
T  3587983 aatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtatt 3588052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 8932733 - 8932664
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | ||| |||||||||||||  |||||||||||||||||| ||||    
T  8932733 aatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatatt 8932664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 8944199 - 8944130
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | ||| |||||||||||||  |||||||||||||||||| ||||    
T  8944199 aatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaacccgatatt 8944130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 336
Target Start/End: Original strand, 29333181 - 29333245
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||||| ||||||||| |||| | |||||||||  |||||| |||||| ||||||||||||||||    
T  29333181 cggctcatgcgtagaggcatgcgcactggccaaacgttgttcccctggaaatcgaacccggtatt 29333245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 388
Target Start/End: Original strand, 21016824 - 21016911
Alignment:
Q  303 aagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    |||||||||| ||| | |||||||||||||||||| ||    ||| || |||||| ||||| ||||||||||||||||||||||||||    
T  21016824 aagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaagcaacttg 21016911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 384
Target Start/End: Original strand, 17115020 - 17115053
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaa 384  Q
    ||||| ||||||||||||||||||||||||||||    
T  17115020 tggaaggagcttcttgccactggagcccaagcaa 17115053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 19572793 - 19572671
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||| ||||||||||| ||   |||| ||  ||||| ||||| |||    
T  19572793 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagctcctt 19572694  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  19572693 gccactggagcccaagcaacttg 19572671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 41163498 - 41163619
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatactctc-tggaatgagcttcttg 366  Q
    ||||| |||| |||||||||||||||| |||||||||  |||||| ||||||||||||||||||||||| ||    |||  || ||||| ||||| ||||    
T  41163498 aatccagctcatgcgtagagacatgtgcactggccaaacgttgttcccctgggaatcgaacccggtattccccgggtacgttcttggaaggagctccttg 41163597  T
Q  367 ccactggagcccaagcaacttg 388  Q
    |||||||||||||| |||||||    
T  41163598 ccactggagcccaaacaacttg 41163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 1538500 - 1538378
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||| ||   |||| ||   |||| ||||| |||    
T  1538500 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgaatacgtcctcggaaggagctcctt 1538401  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  1538400 gccactggagcccaaacaacttg 1538378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 38897757 - 38897878
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| |||||| |||||||||||||||| || |||||| ||  || || ||||| ||||    
T  38897757 aatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaacccggtattccccatatacgtccttgtaaagagctccttg 38897856  T
Q  367 ccactggagcccaagcaacttg 388  Q
    ||||| |||  |||||||||||    
T  38897857 ccacttgagttcaagcaacttg 38897878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 271 - 388
Target Start/End: Complemental strand, 28857194 - 28857075
Alignment:
Q  271 ccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgcc 368  Q
    ||||||| ||||||||| |||| | |||||||||||||||||  ||||||||||||||||||||||| ||    | | ||  ||||| ||||| ||||||    
T  28857194 ccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgcc 28857095  T
Q  369 actggagcccaagcaacttg 388  Q
    ||||||||||||||||||||    
T  28857094 actggagcccaagcaacttg 28857075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 20525907 - 20525785
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||| |||||||||| | ||||||||||||||||| |||| ||   |||| ||  || || ||||| |||    
T  20525907 aatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatccttgaaaggagctcctt 20525808  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  20525807 gccactggagcccaagcaacttg 20525785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 26077210 - 26077088
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| ||||||||| |||||| |||||||||| |||||| || ||||||||||||||  ||||| || | |||| ||  ||||||||||| |||    
T  26077210 aatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctcctt 26077111  T
Q  366 gccactggagcccaagcaacttg 388  Q
     |||||||||||||| |||||||    
T  26077110 accactggagcccaaacaacttg 26077088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 42861256 - 42861370
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctggg-aatcgaacccggtatttccaatata-ctctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||||||||||||||||||||||||| ||| ||||||| |||| ||   |||  ||  ||||||||||| |||    
T  42861256 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttccctgggaaattgaacccgatattccccggatatgtccttggaatgagctcctt 42861355  T
Q  366 gccactggagcccaa 380  Q
    |||||||||||||||    
T  42861356 gccactggagcccaa 42861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 7308402 - 7308527
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||||| |||| ||||| |||||| ||| ||||||||||||||| |||| |  | |||| ||  ||||||||||| |||    
T  7308402 aatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttggaatgagctcctt 7308501  T
Q  366 gccactggagcccaagcaacttgatt 391  Q
    |||||| || ||||| ||||||||||    
T  7308502 gccactagaacccaaacaacttgatt 7308527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 4016293 - 4016415
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| || |||||| |||| | ||||||||||||||||| ||| ||  ||||||||||| ||||||  |  ||| ||  |||||||||||||||    
T  4016293 aatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaacccgatatttctcaggtacgtccttggaatgagcttctt 4016392  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||  |||||||    
T  4016393 gccactggagcccatacaacttg 4016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 5731958 - 5732080
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| | ||||||| |||| | |||||||||| |||||| | |||||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  5731958 aatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 5732057  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  5732058 gccactggagcccaagcaacttg 5732080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 18136318 - 18136440
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| || |||||| ||||   |||| |||||||||||| ||| ||||||||||||||||||||  |   |||| ||| ||||| ||||| |||    
T  18136318 aatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctcctt 18136417  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  18136418 gccactggagcccaaacaacttg 18136440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 9805073 - 9805004
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| ||| ||||||||||||||||||||    
T  9805073 aatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 9805004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 42291543 - 42291612
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||||| |||||||||| ||||||  ||||||||||| |||||||||||    
T  42291543 aatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtatt 42291612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 38369768 - 38369700
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||||| ||| ||||||||| |||| | ||||||||||||||||| ||||| |||||||||||| ||||    
T  38369768 aatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttcccctgagaatcgaacccgatatt 38369700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 8513588 - 8513466
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| ||||||||| |||||| ||||||||||  ||||||||| | |||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  8513588 aatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaacccggtattccccgggtacgtccttggaaggagctcctt 8513489  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||| ||| ||||||||||||    
T  8513488 gccacttgagtccaagcaacttg 8513466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 380
Target Start/End: Original strand, 25417221 - 25417335
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| | ||||||| |||| | |||||||||| |||||| ||| |||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  25417221 aatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagctcctt 25417320  T
Q  366 gccactggagcccaa 380  Q
    |||||||||||||||    
T  25417321 gccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 30995190 - 30995068
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| |  ||||||||||||||||  |||||||||||||||| |||||| || || ||| ||  ||||| ||||| |||    
T  30995190 aatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggagctcctt 30995091  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||  | |||| ||||||||    
T  30995090 gccactaaaacccaggcaacttg 30995068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 42086396 - 42086274
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | ||||| |||| |||||| ||| |||||||||||||||||||| |     ||| ||  ||||| ||||| |||    
T  42086396 aatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacccggtattcctcgggtacgtccttggaaggagctcctt 42086297  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||| |||||||||||||||||    
T  42086296 gccaccggagcccaagcaacttg 42086274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 37263309 - 37263188
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttg 366  Q
    |||||||||| ||||||||| |||| | | |||||||| |||||| ||||| |||||||||||| |||| ||    ||| ||  | ||| || || ||||    
T  37263309 aatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaacccgatattccccgggtacgtccttagaaggaactccttg 37263210  T
Q  367 ccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||||||    
T  37263209 ccactggagcccaagcaacttg 37263188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 39099817 - 39099861
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt 312  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||    
T  39099817 aatccggctcatgcgtagaggcatgtgcactggccaagtgttgtt 39099861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 388
Target Start/End: Complemental strand, 16755102 - 16755008
Alignment:
Q  296 actggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||| ||||  |||||||||| ||||| ||   |||| ||| ||||| ||||| |||||||||| |||||||| ||||||    
T  16755102 actggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaaggaacttg 16755008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 6767174 - 6767211
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  6767174 tggaaggagctccttgccactggagcccaagcaacttg 6767211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 20692986 - 20692933
Alignment:
Q  284 agagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    |||| ||||||||||||||||| ||||||||| || |||||| |||||||||||    
T  20692986 agaggcatgtgtactggccaagcgttgtttcctctaggaatcaaacccggtatt 20692933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 23383726 - 23383657
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    ||||| |||| ||||||||| || | | |||||||||| |||||| ||| ||||||||||||||||||||    
T  23383726 aatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 23383657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 388
Target Start/End: Complemental strand, 28856961 - 28856924
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  28856961 tggaaggagctccttgccactggagcccaagcaacttg 28856924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 35813121 - 35813161
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttgatt 391  Q
    |||||||||||||||||||| | ||||||| ||||||||||    
T  35813121 tggaatgagcttcttgccaccgcagcccaaacaacttgatt 35813161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 42292146 - 42292186
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttgatt 391  Q
    ||||||||||| |||||||||||||||||| ||| ||||||    
T  42292146 tggaatgagctccttgccactggagcccaaacaatttgatt 42292186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 2550936 - 2550814
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| |||||||||||||| | |||||| |||||||||| | ||||||||||||||||| |||| ||   |||| ||  || || ||||| |||    
T  2550936 aatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaaggagctcctt 2550837  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  2550836 gccactggagcccaagcaacttg 2550814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 331569 - 331447
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||  |||| | |||||||||||||||||  ||||||||||||||||||||||| ||    ||| ||  ||||| |||||  ||    
T  331569 aatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaagagctcatt 331470  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  331469 gccactggagcccaagcaacttg 331447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 8410199 - 8410077
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  |||||||||||||||||| ||||  |    ||| ||  ||||| ||||| |||    
T  8410199 aatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaaggagctcctt 8410100  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  8410099 gccactggagcccaagcaacttg 8410077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 21180352 - 21180421
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||| ||| ||||||||||| ||||||||    
T  21180352 aatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtatt 21180421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 391
Target Start/End: Complemental strand, 21286512 - 21286387
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| ||||||||| |||| | ||||| |||| |||||||| |||||||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  21286512 aatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 21286413  T
Q  366 gccactggagcccaagcaacttgatt 391  Q
    ||||||||||| ||| ||||||||||    
T  21286412 gccactggagctcaaacaacttgatt 21286387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 391
Target Start/End: Original strand, 45263705 - 45263830
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatttccaatat-actctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| || ||||||||||||||||||||| ||   || | | | || || ||||| |||    
T  45263705 aatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaatttttgaaaggagctcctt 45263804  T
Q  366 gccactggagcccaagcaacttgatt 391  Q
    ||||||||||||||| ||||||||||    
T  45263805 gccactggagcccaaacaacttgatt 45263830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 268 - 386
Target Start/End: Original strand, 6358189 - 6358309
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  |||||| ||||||| | |||||| ||   |||| ||  | |||||||||||||    
T  6358189 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatctggtattccccggatacgtcctttgaatgagcttctt 6358288  T
Q  366 gccactggagcccaagcaact 386  Q
    ||||||||||||||| |||||    
T  6358289 gccactggagcccaaacaact 6358309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 388
Target Start/End: Original strand, 20612576 - 20612696
Alignment:
Q  271 ccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc--ctgggaatcgaacccggtatttcc--aatatactctctggaatgagcttcttg 366  Q
    ||||||| ||| ||||| |||| | ||||||||||||||||| ||  ||| ||||||||||||||||| ||  |||| |  || ||||| ||||| ||||    
T  20612576 ccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcgaacccggtattccccgaatacaacct-tggaaggagctccttg 20612674  T
Q  367 ccactggagcccaagcaacttg 388  Q
    ||||||||||||||||||||||    
T  20612675 ccactggagcccaagcaacttg 20612696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 7747342 - 7747220
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| ||||   |||||||||  |||||| | ||| |||||||||||||||||| ||   |||| ||  ||||| ||||| |||    
T  7747342 aatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaacccggtattccccggatacgtccttggaaggagctcctt 7747243  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  7747242 gccactggagcccaagcaacttg 7747220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 18902568 - 18902690
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||| ||||| |||||||||||| | | ||||| |||| |||||| ||| |||||||||||||||||||| ||    ||| ||  ||||| ||||| |||    
T  18902568 aatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattccccgagtacgtccttggaaggagctcctt 18902667  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||||||||||||||||||||||    
T  18902668 gccactggagcccaagcaacttg 18902690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 34356274 - 34356152
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||| ||||| |||| | |||| |||||||||||| ||| ||| |||||||||||||||| || | |||| ||  |||||  |||| |||    
T  34356274 aatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctcctt 34356175  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  34356174 gccactggagcccaaacaacttg 34356152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 7787124 - 7787055
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| ||||||||||||| |||||  |||||| ||||||||||||||||    
T  7787124 aatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtatt 7787055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 25540442 - 25540551
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| ||| | |||||||||||| ||||| || | |||| ||  ||||||||||| |||    
T  25540442 aatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaacccagtattccccagatacgtccttggaatgagctcctt 25540541  T
Q  366 gccactggag 375  Q
    ||||||||||    
T  25540542 gccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 10669660 - 10669593
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggta 334  Q
    |||||| ||| |||||||||||||| | |||||||||| |||||| |||||||||||| |||||||||    
T  10669660 aatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 34722748 - 34722685
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaaccc 330  Q
    |||||||||| |||||||||||||||| |||| ||||| |||||| |||||| |||||||||||    
T  34722748 aatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaaccc 34722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 10026654 - 10026776
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| |||| | |||||||||  |||||| ||| || |||||||||||||||||| |    ||| ||  ||||| ||||| |||    
T  10026654 aatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtattttccgagtacgtccttggaaggagctcctt 10026753  T
Q  366 gccactggagcccaagcaacttg 388  Q
    |||| ||||||||||||||||||    
T  10026754 gccattggagcccaagcaacttg 10026776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 14169647 - 14169769
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgg-gaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| |||||||||||||| | ||||| ||||||||||| ||| || |||||||||||| |||| ||   |||| ||  ||||| || || |||    
T  14169647 aatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattccccgaatacgtccttggaaagatctcctt 14169746  T
Q  366 gccactggagcccaagcaacttg 388  Q
    | ||||||||||||| |||||||    
T  14169747 gtcactggagcccaaacaacttg 14169769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 38005470 - 38005348
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccct-gggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| || |||||| |||| | |||||||||| |||||| |||| ||||||||||||| ||||| ||    ||| ||  ||||| ||||| |||    
T  38005470 aatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttggaaggagctcctt 38005371  T
Q  366 gccactggagcccaagcaacttg 388  Q
    ||||||||||||||| |||||||    
T  38005370 gccactggagcccaaacaacttg 38005348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Original strand, 41031944 - 41032010
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggt 333  Q
    |||||||||| ||||||||| ||||   |||||||||||||||||  ||||||||||||||||||||    
T  41031944 aatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggt 41032010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 388
Target Start/End: Complemental strand, 44139552 - 44139430
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    |||||||||| ||||||||| || | | |||||||||| |||||| ||| |||||||||||||||||||| || | || | ||  ||||| ||| | ||     
T  44139552 aatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccagatgcatccttggaaggagttcctc 44139453  T
Q  366 gccactggagcccaagcaacttg 388  Q
     ||||||||||||||||||||||    
T  44139452 accactggagcccaagcaacttg 44139430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 10823128 - 10823059
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||||||| |||||| | |||||||||| |||||||||||    
T  10823128 aatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaacccggtatt 10823059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 12455378 - 12455309
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||| ||| |||||||||| ||| ||||||||||||||||    
T  12455378 aatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaacccggtatt 12455309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 336
Target Start/End: Complemental strand, 33005808 - 33005751
Alignment:
Q  279 tgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    ||||||||| |||| | ||||||||||||||||| |||||||||  ||||||||||||    
T  33005808 tgcgtagaggcatgcgcactggccaagtgttgttcccctgggaacagaacccggtatt 33005751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 41220699 - 41220634
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgtttc-cctgggaatcgaacccggtatt 336  Q
    |||||| ||||||||| |||| | |||||||||| |||||| | ||||||||||||||||||||||    
T  41220699 cggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtatt 41220634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 316
Target Start/End: Original strand, 28525493 - 28525541
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc 316  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||||||    
T  28525493 aatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccc 28525541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 388
Target Start/End: Original strand, 3643925 - 3644047
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatttccaatatac-tctctggaatgagcttctt 365  Q
    ||||| |||| ||||||||| |||| | |||||||||| |||||| | | | | |||| ||||||||||| ||   |||| ||  ||||||||||| |||    
T  3643925 aatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttggaatgagctcctt 3644024  T
Q  366 gccactggagcccaagcaacttg 388  Q
     ||||||||||||||||||||||    
T  3644025 tccactggagcccaagcaacttg 3644047  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 3811729 - 3811798
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttcc-ctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | | || |||||||||||| || |||||||||||||||| ||||    
T  3811729 aatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgatatt 3811798  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 392
Target Start/End: Complemental strand, 37560156 - 37560115
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttgattg 392  Q
    ||||| ||||||||| |||||||||||||| |||||||||||    
T  37560156 tggaaggagcttcttaccactggagcccaaacaacttgattg 37560115  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 29653691 - 29653623
Alignment:
Q  272 cggctcctgcgtagagacatgtgtactggccaagtgttgttt-ccctgggaatcgaacccggtatttcc 339  Q
    |||||| ||||||||| |||| | |||| ||||| ||||||| |||||| ||||||| |||||||||||    
T  29653691 cggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatttcc 29653623  T

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Target: scaffold0291 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 6926 - 6857
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    |||||||||| ||||||||| |||| | |||||||||||||||||  |||||||||||||||||||||||    
T  6926 aatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatt 6857  T

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Target: scaffold0341 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 333
Target Start/End: Complemental strand, 18703 - 18637
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggt 333  Q
    |||| ||||| |||||||||||||||| |||||||||| ||||||  |||| |||||||||||||||    
T  18703 aatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 18637  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 250136 - 250173
Alignment:
Q  351 tggaatgagcttcttgccactggagcccaagcaacttg 388  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  250136 tggaatgagctccttgccactggagcccaagcaacttg 250173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 271115 - 271181
Alignment:
Q  271 ccggctcctgcgtagagacatgtgtactggccaagtgttgtt-tccctgggaatcgaacccggtatt 336  Q
    ||||||| |||||||||||||| | |||| ||||| ||||||  |||||||||||||||||| ||||    
T  271115 ccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatatt 271181  T

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Target: scaffold0209 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 12644 - 12575
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatttc 338  Q
    |||||| ||| ||||||||| |||| | ||||| |||| |||||| |||| ||||||||||||||||||||    
T  12644 aatccgactcatgcgtagaggcatgcgcactggtcaagcgttgtt-ccctaggaatcgaacccggtatttc 12575  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 336
Target Start/End: Complemental strand, 8231 - 8177
Alignment:
Q  282 gtagagacatgtgtactggccaagtgttgtttccctgggaatcgaacccggtatt 336  Q
    |||||| |||| | |||||||||| |||||| || ||||||||||||||||||||    
T  8231 gtagaggcatgcgcactggccaagcgttgttcccttgggaatcgaacccggtatt 8177  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 8739 - 8808
Alignment:
Q  268 aatccggctcctgcgtagagacatgtgtactggccaagtgttgtttccc-tgggaatcgaacccggtatt 336  Q
    ||||| |||| ||||||||| || | | |||||||||| |||||| ||| ||||||||||||||||||||    
T  8739 aatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtatt 8808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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