View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16177_low_51 (Length: 383)

Name: NF16177_low_51
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16177_low_51
NF16177_low_51
[»] chr6 (7 HSPs)
chr6 (1-133)||(18192934-18193066)
chr6 (1-137)||(11020317-11020453)
chr6 (16-132)||(11020178-11020294)
chr6 (6-133)||(30757353-30757482)
chr6 (4-133)||(18191746-18191875)
chr6 (10-133)||(31857098-31857221)
chr6 (87-133)||(9448781-9448827)
[»] chr3 (3 HSPs)
chr3 (1-133)||(36164505-36164637)
chr3 (1-133)||(36163383-36163515)
chr3 (92-133)||(18912548-18912589)
[»] chr8 (4 HSPs)
chr8 (1-130)||(32564510-32564639)
chr8 (1-134)||(32565563-32565696)
chr8 (87-140)||(12887740-12887793)
chr8 (90-134)||(5005707-5005751)
[»] chr2 (7 HSPs)
chr2 (134-231)||(4139559-4139656)
chr2 (1-130)||(4754966-4755094)
chr2 (1-133)||(4753528-4753660)
chr2 (330-378)||(4139655-4139703)
chr2 (6-133)||(31622039-31622166)
chr2 (10-134)||(40893243-40893367)
chr2 (89-133)||(40894888-40894932)
[»] chr1 (2 HSPs)
chr1 (1-133)||(26529508-26529640)
chr1 (6-133)||(36573962-36574089)
[»] chr5 (4 HSPs)
chr5 (277-348)||(33690412-33690483)
chr5 (227-265)||(33690475-33690513)
chr5 (1-133)||(38921455-38921587)
chr5 (137-181)||(33690519-33690563)
[»] chr7 (2 HSPs)
chr7 (10-133)||(38517689-38517812)
chr7 (89-134)||(45291970-45292015)
[»] scaffold0115 (2 HSPs)
scaffold0115 (79-139)||(6087-6147)
scaffold0115 (79-139)||(13827-13887)
[»] chr4 (1 HSPs)
chr4 (90-137)||(41774640-41774687)


Alignment Details
Target: chr6 (Bit Score: 109; Significance: 1e-54; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 18192934 - 18193066
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18192934 aacaccaagttaacgttttggattaaattgactaacagaactaacattgagggagtttttaataatttatgttgatcgagggactggcctgatagcgagg 18193033  T
Q  101 gacactttcagggatccaaatgagtgtttactc 133  Q
    |||||||||||||| ||||||||| ||||||||    
T  18193034 gacactttcagggacccaaatgagggtttactc 18193066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 11020317 - 11020453
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||    
T  11020317 aacaccaagttaacattttggattaaattgactaatggaactaacattgagggagtttttaataatttctgttgatcgagggattggtctgatagcgagg 11020416  T
Q  101 gacactttcagggatccaaatgagtgtttactccatt 137  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  11020417 gacactttcagggacccaaatgagggtttactccatt 11020453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 11020294 - 11020178
Alignment:
Q  16 ttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagggacactttcagggat 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||     
T  11020294 ttttggattaaattgactaacggaactaacattgagggagtttttaataatttctgttgattgagggactggtctgatagtgagggacactttcagggac 11020195  T
Q  116 ccaaatgagtgtttact 132  Q
    ||||||||| |||||||    
T  11020194 ccaaatgagagtttact 11020178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 30757482 - 30757353
Alignment:
Q  6 caagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggac-tg-gtctgatagtgagggac 103  Q
    |||||||||||||  || ||||||| | ||||||||||||||||| |||||||||||||||||||||||||| | | || || || |||||| ||| |||    
T  30757482 caagttaacgtttcagactaaattgacgaacggaactaacattgaaggagtttttaataatttatgttgatccaagaacgtgtgtgtgatagcgagagac 30757383  T
Q  104 actttcagggatccaaatgagtgtttactc 133  Q
    |||||||| |||| ||||||| ||||||||    
T  30757382 actttcagagatctaaatgagagtttactc 30757353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 133
Target Start/End: Complemental strand, 18191875 - 18191746
Alignment:
Q  4 accaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagggac 103  Q
    ||||||||||||||||||||  | ||| |||||  |||  |||||| |||||||||| ||   |||  ||||| |||||||||||||||||| | |||||    
T  18191875 accaagttaacgttttggatgcatttgactaacataacatacattgggggagtttttgattcattaaattgattgagggactggtctgatagcgtgggac 18191776  T
Q  104 actttcagggatccaaatgagtgtttactc 133  Q
    ||||||||||| ||||||||| ||||||||    
T  18191775 actttcagggacccaaatgagggtttactc 18191746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 31857098 - 31857221
Alignment:
Q  10 ttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagggacactttc 109  Q
    |||||||||  |||||||||  |||||  || ||||||||| ||||||||||||| ||| | |||||  | || ||| ||||||||| || |||||||||    
T  31857098 ttaacgtttcagattaaattaactaacaaaattaacattgatggagtttttaatagtttctattgattcacggtctgatctgatagtaagtgacactttc 31857197  T
Q  110 agggatccaaatgagtgtttactc 133  Q
    |||||  ||||||||  |||||||    
T  31857198 agggactcaaatgaggatttactc 31857221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 9448781 - 9448827
Alignment:
Q  87 gtctgatagtgagggacactttcagggatccaaatgagtgtttactc 133  Q
    ||||||||| |||| ||||||||||||| ||||||||| ||||||||    
T  9448781 gtctgatagcgaggtacactttcagggacccaaatgagggtttactc 9448827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 36164505 - 36164637
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||    
T  36164505 aacaccaagttaacgttttggattaaattgactaacggaactaacattgagagagtttttaataatttctgttgatcgagggactggtctgatagcgagg 36164604  T
Q  101 gacactttcagggatccaaatgagtgtttactc 133  Q
    |||||||||||||| ||||||||| ||||||||    
T  36164605 gacactttcagggacccaaatgagggtttactc 36164637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 36163515 - 36163383
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||||||||||||||||||||||  | ||| |||||  |||  |||||| |||||||||| ||   |||  ||||| |||||| ||||||||||| ||||    
T  36163515 aacaccaagttaacgttttggatgcatttgactaacataacgtacattgggggagtttttgattcattaaattgattgagggattggtctgatagcgagg 36163416  T
Q  101 gacactttcagggatccaaatgagtgtttactc 133  Q
    |||||||||||||||||||||||  ||||||||    
T  36163415 gacactttcagggatccaaatgaaggtttactc 36163383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Complemental strand, 18912589 - 18912548
Alignment:
Q  92 atagtgagggacactttcagggatccaaatgagtgtttactc 133  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||    
T  18912589 atagtgaggtacactttcagggacccaaatgagggtttactc 18912548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 32564639 - 32564510
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32564639 aacaccaagttaacgttttggattaaattgactgatggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagcgagg 32564540  T
Q  101 gacactttcagggatccaaatgagtgttta 130  Q
    |||||||||| ||| ||||||||| |||||    
T  32564539 gacactttcaaggacccaaatgagggttta 32564510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 32565563 - 32565696
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||| ||||||||||||||||||  | ||| |||||  |||  |||||| |||||||||| ||   |||  |||||||||||||||||||||||| ||||    
T  32565563 aacatcaagttaacgttttggatgcatttgactaacataacgtacattgggggagtttttgattcattaaattgatcgagggactggtctgatagcgagg 32565662  T
Q  101 gacactttcagggatccaaatgagtgtttactcc 134  Q
    |||||||||||||| | ||| ||| |||||||||    
T  32565663 gacactttcagggacctaaacgagggtttactcc 32565696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 140
Target Start/End: Original strand, 12887740 - 12887793
Alignment:
Q  87 gtctgatagtgagggacactttcagggatccaaatgagtgtttactccattttt 140  Q
    ||||||| | |||| ||||||||||||| ||||||||| |||||||| ||||||    
T  12887740 gtctgatcgcgaggtacactttcagggacccaaatgagggtttactcgattttt 12887793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 134
Target Start/End: Complemental strand, 5005751 - 5005707
Alignment:
Q  90 tgatagtgagggacactttcagggatccaaatgagtgtttactcc 134  Q
    |||||| |||| ||||||||||||| ||||||||| |||||||||    
T  5005751 tgatagcgaggtacactttcagggacccaaatgagggtttactcc 5005707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 4139559 - 4139656
Alignment:
Q  134 catttttgacgtttcaactataaagcaagggtagttttgtaaatccccatatcctatctctttttcatcttctctctatttttctccacaccgccatc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  4139559 catttttgacgtttcaactataaagcaagggtagttttgtaaatccccatatcccatctctttttcatcttctctctatttttctccacaccaccatc 4139656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 4754966 - 4755094
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    ||||||||||||||||||  || ||| ||| |||||| ||||||||||||| ||  ||||||||||||||||||||| ||||||  ||||||||| ||||    
T  4754966 aacaccaagttaacgtttcagactaatttgactaacg-aactaacattgagagatgttttaataatttatgttgatctagggacgtgtctgatagcgagg 4755064  T
Q  101 gacactttcagggatccaaatgagtgttta 130  Q
    ||||||||||| || ||||||||| |||||    
T  4755065 gacactttcagagacccaaatgagggttta 4755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 4753660 - 4753528
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaata-atttatgttgatcgagggactggtctgatagtgag 99  Q
    |||||||||||||||||||||||  | ||| |||||  |||  ||||||||||||||||| ||  |||||  |||||| ||||||||||||||||| |||    
T  4753660 aacaccaagttaacgttttggatgcatttgactaacaaaacatacattgagggagtttttgattcatttaa-ttgatccagggactggtctgatagcgag 4753562  T
Q  100 ggacactttcagggatccaaatgagtgtttactc 133  Q
     |||||||||||||| ||||| ||| ||||||||    
T  4753561 agacactttcagggacccaaacgagggtttactc 4753528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 4139655 - 4139703
Alignment:
Q  330 tcgttgagatctattttcccacacaccgcaaaagactcgttcatatcac 378  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4139655 tcgttgagatctattttccctcacaccgcaaaagactcgttcatatcac 4139703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 31622039 - 31622166
Alignment:
Q  6 caagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggac-tggtctgatagtgagggaca 104  Q
    ||||||||||||||||||  | ||| | |||||||| ||||||||||||||||||| |   || | |||||  |||||| |||| |||||  |||| |||    
T  31622039 caagttaacgttttggatgcatttgacaaacggaacaaacattgagggagtttttagtttgttttcttgattcagggacgtggt-tgataacgaggtaca 31622137  T
Q  105 ctttcagggatccaaatgagtgtttactc 133  Q
    |||||||||| |||||| || ||||||||    
T  31622138 ctttcagggacccaaataagggtttactc 31622166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 40893367 - 40893243
Alignment:
Q  10 ttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagggacactttc 109  Q
    ||||| |||||||||||| ||  ||| |||  |||| |||| |||||||||||||||||  ||||||  |||||   ||||||||| ||| | |||||||    
T  40893367 ttaaccttttggattaaaatgattaatggagttaactttgaaggagtttttaataattttcgttgattcagggatgtgtctgatagcgagtgtcactttc 40893268  T
Q  110 agggatccaaatgagtgtttactcc 134  Q
    | |||   ||||||| |||||||||    
T  40893267 aaggacgaaaatgagggtttactcc 40893243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 40894888 - 40894932
Alignment:
Q  89 ctgatagtgagggacactttcagggatccaaatgagtgtttactc 133  Q
    ||||||| |||| ||||||| ||||||||||||||| ||||||||    
T  40894888 ctgatagcgaggtacacttttagggatccaaatgagggtttactc 40894932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 26529640 - 26529508
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||| ||||||||||||||||||  | ||| ||||| |||| ||||||||||||||||||| |   || | |||||  ||||||  ||||||||| ||||    
T  26529640 aacatcaagttaacgttttggatgcatttgactaacagaacaaacattgagggagtttttagttcgttttcttgattcagggacgtgtctgatagcgagg 26529541  T
Q  101 gacactttcagggatccaaatgagtgtttactc 133  Q
     ||||||||||||| ||||||||| ||||||||    
T  26529540 tacactttcagggacccaaatgagggtttactc 26529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 36574089 - 36573962
Alignment:
Q  6 caagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggac-tggtctgatagtgagggaca 104  Q
    ||||||||||||||||||  | ||| ||||||||||  |||||||||||||||||| |   || | |||||  |||||| |||| |||||| |||| |||    
T  36574089 caagttaacgttttggatgcatttgactaacggaacagacattgagggagtttttagttcgttttcttgattcagggacgtggt-tgatagcgaggtaca 36573991  T
Q  105 ctttcagggatccaaatgagtgtttactc 133  Q
    |||||||||| | ||||||||||||||||    
T  36573990 ctttcagggacctaaatgagtgtttactc 36573962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 6e-16; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 277 - 348
Target Start/End: Complemental strand, 33690483 - 33690412
Alignment:
Q  277 caccaccaccctcctgcactgtcgtccttaccatcgccctcaccaccatgagttcgttgagatctattttcc 348  Q
    ||||||| |||||| |||| |||||||| |||||| |||||||||||||||||||||| ||| |||||||||    
T  33690483 caccaccgccctcccgcaccgtcgtcctcaccatcaccctcaccaccatgagttcgttcagaactattttcc 33690412  T

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Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 33690513 - 33690475
Alignment:
Q  227 ccatcttgctcacacaaccgtcctccccaccaccaccgc 265  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33690513 ccatcttgctcacacaaccgtcctccccaccaccaccgc 33690475  T

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Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 38921587 - 38921455
Alignment:
Q  1 aacaccaagttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagg 100  Q
    |||||||||||||||||||||||  | ||| |||||| ||| | ||||| ||||||||||  |   ||   |||||| |||||   | |||||||||||     
T  38921587 aacaccaagttaacgttttggatgcatttgactaacgaaacaatcattgggggagtttttggttcatttcattgatctagggatgtgcctgatagtgagc 38921488  T
Q  101 gacactttcagggatccaaatgagtgtttactc 133  Q
     ||||||||||||| ||||||||| ||||||||    
T  38921487 aacactttcagggacccaaatgagggtttactc 38921455  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 181
Target Start/End: Complemental strand, 33690563 - 33690519
Alignment:
Q  137 ttttgacgtttcaactataaagcaagggtagttttgtaaatcccc 181  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||    
T  33690563 ttttgacatttcaactataaaacaggggtacttttgtaaatcccc 33690519  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 133
Target Start/End: Original strand, 38517689 - 38517812
Alignment:
Q  10 ttaacgttttggattaaattgtctaacggaactaacattgagggagtttttaataatttatgttgatcgagggactggtctgatagtgagggacactttc 109  Q
    ||||||||||||| |||  || ||||||||  ||||| |||||||| |||| |||||||  ||||||| ||||||  ||||||||| || | | |||||     
T  38517689 ttaacgttttggactaatatgactaacggagttaacaatgagggagcttttgataattttcgttgatccagggacgtgtctgatagcgatgtatactttt 38517788  T
Q  110 agggatccaaatgagtgtttactc 133  Q
    |||||  |||||||| ||||||||    
T  38517789 agggactcaaatgagggtttactc 38517812  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 45291970 - 45292015
Alignment:
Q  89 ctgatagtgagggacactttcagggatccaaatgagtgtttactcc 134  Q
    ||||||| |||| ||||||||||||| ||||||||| |||||||||    
T  45291970 ctgatagcgaggtacactttcagggacccaaatgagggtttactcc 45292015  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 6087 - 6147
Alignment:
Q  79 agggactggtctgatagtgagggacactttcagggatccaaatgagtgtttactccatttt 139  Q
    |||||| || ||||||| |||| |||||||||||||  |||||||| ||||||||||||||    
T  6087 agggacggggctgatagcgaggtacactttcagggactcaaatgagggtttactccatttt 6147  T

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Target: scaffold0115; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 139
Target Start/End: Original strand, 13827 - 13887
Alignment:
Q  79 agggactggtctgatagtgagggacactttcagggatccaaatgagtgtttactccatttt 139  Q
    |||||| || ||||||| |||| |||||||||||||  |||||||| ||||||||||||||    
T  13827 agggacggggctgatagcgaggtacactttcagggactcaaatgagggtttactccatttt 13887  T

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Target: chr4 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 41774687 - 41774640
Alignment:
Q  90 tgatagtgagggacactttcagggatccaaatgagtgtttactccatt 137  Q
    |||||| |||| ||||||||||||| ||||||||| ||||||||||||    
T  41774687 tgatagcgaggtacactttcagggacccaaatgagagtttactccatt 41774640  T

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