View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_low_67 (Length: 330)
Name: NF16177_low_67
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_low_67 |
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Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 54 - 321
Target Start/End: Complemental strand, 25121535 - 25121268
Alignment:
| Q |
54 |
ggctgtgttcaagaaattttcttcataattcttgaattttgaagagaatctttctgtctacggattcaagtagcccaatttcatcaaccaatttatcatc |
153 |
Q |
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| T |
25121535 |
ggctgtgttcaagaaattttcttcataattcttgaattttgaagagaatctttctgtctacggattcaagtagcccaatttcatcaaccaatttatcatc |
25121436 |
T |
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| Q |
154 |
ctcattgtaatcctcatcaatagaaatattcaaatccaaagaaagataagaacttgtctcttccaaagtagcaacattaatatcatcatctttgtcttct |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25121435 |
ctcattgtaatcctcatcaatagaaatattcaaatccaaagaaacataagaacttgtctcttccaaagtagcaacattaatatcatcatctttgtcttct |
25121336 |
T |
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| Q |
254 |
tgagatgatctttgtttaggagaacaaactcttgatcttgaactaaaattttcacagcttagaataat |
321 |
Q |
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| T |
25121335 |
tgagatgatctttgtttaggagaacaaactcttgatcttgaactaaaattttcacagcttagaataat |
25121268 |
T |
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