View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_low_92 (Length: 276)
Name: NF16177_low_92
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_low_92 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 9 - 256
Target Start/End: Complemental strand, 1481122 - 1480875
Alignment:
| Q |
9 |
acatcatcacatacttaatactccatagtacataacacatacaactcaagaaaggctaaaagtcttttttcgcgagctttcttatactaaactcaagaaa |
108 |
Q |
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|||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
1481122 |
acattatcacatacttaacactccgtagtacataacacatacaactcaagaaaggctaaaagtcttttttcgcgagctttcttattctaaactcaagaaa |
1481023 |
T |
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| Q |
109 |
ggctaaaagtctgtttttcacgagctttcttatgctaaaatagaagcctcaatacacaaacaaaattacaccatcaatctcctaaagctatcaagcatcc |
208 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1481022 |
ggctaaaagtctgtttttcacgagctttcttatactaaaatagaagcctcaatacacaaacaaaattacaccatcaatctcctaaagctatcaagcatcc |
1480923 |
T |
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| Q |
209 |
aaacaatgatgaaagaaatagtagcgtttcattgttccatctttcaat |
256 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
1480922 |
aaacaatgatgaaagaaatagtagcgtttcaatgttccatctttcaat |
1480875 |
T |
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