View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_low_93 (Length: 276)
Name: NF16177_low_93
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_low_93 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 18 - 258
Target Start/End: Complemental strand, 1867594 - 1867354
Alignment:
| Q |
18 |
ctgcaaatatcttgttggcctaaaagaaaagctactgctgcctttggaagtagttgccaaattctcgtttccattaacctttgaaatagcttcatcattg |
117 |
Q |
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| T |
1867594 |
ctgcaaatatcttgttggcctaaaagaaaagctactgctgcctttggaagtagttgccaaattctcgtttccattaacctttgaaatagcatcatcattg |
1867495 |
T |
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| Q |
118 |
aaactcattttacttgaatcaccattaccattagactcaattgatagaacagttgcaaaagcaaaattgtccatagaaactgatctcctaggccgaacga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1867494 |
aaactcattttacttgaatcaccattaccattagactcaattgatagaacagttgcaaaagcaaaattgtccatagaaactgatctcctaggccgaacga |
1867395 |
T |
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| Q |
218 |
tgctaaccacatcgacaacttgcctatcattttcacatacc |
258 |
Q |
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| T |
1867394 |
tgctaaccacatcgacaacttgcctttcattttcacatacc |
1867354 |
T |
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