View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16177_low_99 (Length: 261)
Name: NF16177_low_99
Description: NF16177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16177_low_99 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 43169189 - 43168955
Alignment:
| Q |
9 |
agcacagatagatttgggggtgtcatggaacaacactaaacaataaattatgtcaaaagaaagatggaaaacgtgaataattatgacatatagcagtaac |
108 |
Q |
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| T |
43169189 |
agcacagatagatttgggggtgtcatggaacaacactaaacaataaattatgtcaaaagaaagatggaaaacgtgaataattatgacatatagcagtaac |
43169090 |
T |
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| Q |
109 |
cataattatgaaaccaatattaattactgaaatcaaatatgtttaaactttgaacttcaaaaagtgaacttacagtttttccaaaagcttatcagtcata |
208 |
Q |
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| T |
43169089 |
cataattatgaaaacaatattaattactgaaatcaaatatgtttaaactttgaacttcaaaaagtgaacttacagtttttccaaaagcttatcagtcata |
43168990 |
T |
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| Q |
209 |
tcaactcgaaaaggatccttgggatccatctgttt |
243 |
Q |
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| T |
43168989 |
tcaactcgaaaaggatccttgggatccatctgttt |
43168955 |
T |
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