View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16178_high_11 (Length: 223)
Name: NF16178_high_11
Description: NF16178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16178_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 2635764 - 2635558
Alignment:
| Q |
1 |
gaaaatgagtcaagagaattgttcaaatcctcttgaactgtttcaatataattgaaagggtaattaggatcataagagactatgtttgaacttgaatgtg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2635764 |
gaaaatgagtcaagagaattgttcaaatcctcttgaactgtttcaatataattgaaagggtaattaggatcataagagactatgtttgaacttgaatgtg |
2635665 |
T |
|
| Q |
101 |
tgtggaaagaaatatcaatagtatagatatcactatcagcagacattgaaacagaattcaaaattttattgaactcctcttgatacactacaattgaagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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|
| T |
2635664 |
tgtggaaagaaatatcaatagtatagatatcactatcagcagacattgaaacagaattcaaaattttgttgaactcctcttgatacactacaattgaagt |
2635565 |
T |
|
| Q |
201 |
tggggag |
207 |
Q |
| |
|
||||||| |
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|
| T |
2635564 |
tggggag |
2635558 |
T |
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