View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1617_low_11 (Length: 269)

Name: NF1617_low_11
Description: NF1617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1617_low_11
NF1617_low_11
[»] chr1 (36 HSPs)
chr1 (2-253)||(28493054-28493304)
chr1 (2-151)||(22202615-22202765)
chr1 (2-123)||(33257102-33257223)
chr1 (2-123)||(33277274-33277395)
chr1 (2-153)||(48703444-48703596)
chr1 (2-109)||(22202493-22202600)
chr1 (2-150)||(30892260-30892409)
chr1 (67-151)||(20959829-20959912)
chr1 (29-131)||(2833872-2833974)
chr1 (40-140)||(1899554-1899654)
chr1 (2-150)||(7308986-7309136)
chr1 (76-150)||(12283590-12283665)
chr1 (28-123)||(22428098-22428193)
chr1 (1-123)||(10756657-10756778)
chr1 (40-150)||(32786710-32786822)
chr1 (67-150)||(14294081-14294164)
chr1 (40-150)||(22153021-22153133)
chr1 (28-152)||(25449347-25449471)
chr1 (40-129)||(38281581-38281670)
chr1 (29-151)||(29214994-29215118)
chr1 (40-109)||(2266324-2266393)
chr1 (40-128)||(1577068-1577156)
chr1 (40-128)||(22600958-22601046)
chr1 (40-128)||(23037295-23037383)
chr1 (67-150)||(22465611-22465696)
chr1 (71-128)||(36133430-36133487)
chr1 (89-150)||(12625367-12625430)
chr1 (88-128)||(21121871-21121911)
chr1 (89-152)||(21192703-21192769)
chr1 (88-128)||(21205676-21205716)
chr1 (88-128)||(21215491-21215531)
chr1 (88-123)||(21135977-21136012)
chr1 (89-123)||(18614138-18614172)
chr1 (2-128)||(44824488-44824612)
chr1 (89-151)||(17025821-17025885)
chr1 (89-122)||(26555597-26555630)
[»] scaffold0530 (1 HSPs)
scaffold0530 (4-128)||(2780-2904)
[»] scaffold0022 (3 HSPs)
scaffold0022 (6-152)||(36624-36772)
scaffold0022 (6-152)||(134684-134832)
scaffold0022 (40-120)||(158375-158455)
[»] chr6 (36 HSPs)
chr6 (2-150)||(15301413-15301563)
chr6 (2-150)||(13601362-13601512)
chr6 (2-150)||(25593269-25593416)
chr6 (28-128)||(14732945-14733045)
chr6 (2-121)||(12716250-12716369)
chr6 (40-150)||(17380757-17380870)
chr6 (40-150)||(14101286-14101398)
chr6 (40-148)||(16528511-16528622)
chr6 (40-150)||(19085327-19085439)
chr6 (28-128)||(19623206-19623306)
chr6 (40-123)||(10631361-10631444)
chr6 (40-152)||(13435078-13435192)
chr6 (40-123)||(15532472-15532555)
chr6 (28-128)||(20113463-20113564)
chr6 (29-151)||(32543457-32543581)
chr6 (29-128)||(21234375-21234474)
chr6 (40-150)||(21624286-21624399)
chr6 (29-150)||(22801339-22801461)
chr6 (40-151)||(19687927-19688040)
chr6 (67-123)||(29537845-29537901)
chr6 (29-128)||(18434729-18434828)
chr6 (43-117)||(24116047-24116122)
chr6 (2-128)||(16332949-16333073)
chr6 (40-122)||(20731548-20731630)
chr6 (40-128)||(17304108-17304194)
chr6 (44-140)||(21617461-21617556)
chr6 (40-123)||(9717050-9717133)
chr6 (29-128)||(18377646-18377745)
chr6 (40-128)||(24717659-24717749)
chr6 (40-121)||(7762866-7762945)
chr6 (28-150)||(16876107-16876227)
chr6 (88-150)||(19624971-19625035)
chr6 (68-150)||(15986558-15986641)
chr6 (41-123)||(26941630-26941710)
chr6 (67-150)||(19833858-19833942)
chr6 (101-150)||(26588794-26588845)
[»] chr7 (55 HSPs)
chr7 (2-128)||(13731489-13731615)
chr7 (1-128)||(13645670-13645797)
chr7 (1-123)||(16315349-16315471)
chr7 (2-123)||(2914469-2914589)
chr7 (1-151)||(10883982-10884134)
chr7 (2-151)||(11318588-11318740)
chr7 (1-123)||(13302085-13302207)
chr7 (1-116)||(9068992-9069106)
chr7 (1-123)||(13681519-13681641)
chr7 (2-151)||(12367571-12367721)
chr7 (28-151)||(33604098-33604223)
chr7 (40-150)||(4493739-4493851)
chr7 (40-120)||(5001713-5001793)
chr7 (2-150)||(11792065-11792215)
chr7 (2-128)||(24787579-24787704)
chr7 (40-113)||(16317447-16317520)
chr7 (40-128)||(16546188-16546276)
chr7 (40-128)||(16619386-16619474)
chr7 (40-148)||(13261526-13261636)
chr7 (54-152)||(30025126-30025227)
chr7 (40-150)||(2499223-2499335)
chr7 (40-150)||(13259294-13259406)
chr7 (40-150)||(21691617-21691731)
chr7 (40-123)||(16310806-16310889)
chr7 (28-123)||(41843261-41843356)
chr7 (2-150)||(13034666-13034818)
chr7 (29-123)||(28623193-28623287)
chr7 (40-118)||(29936196-29936274)
chr7 (40-129)||(13473338-13473426)
chr7 (67-128)||(15467134-15467195)
chr7 (40-150)||(21284225-21284337)
chr7 (45-150)||(16557466-16557573)
chr7 (45-150)||(16608089-16608196)
chr7 (29-128)||(22580094-22580193)
chr7 (29-128)||(35954751-35954850)
chr7 (2-150)||(12175148-12175296)
chr7 (40-152)||(14186878-14186993)
chr7 (40-129)||(19328861-19328950)
chr7 (40-128)||(13879362-13879450)
chr7 (40-152)||(13027802-13027916)
chr7 (40-150)||(13138776-13138889)
chr7 (29-151)||(33692562-33692687)
chr7 (41-123)||(48237687-48237769)
chr7 (40-128)||(14424526-14424614)
chr7 (44-128)||(15705349-15705432)
chr7 (89-123)||(13902553-13902587)
chr7 (88-123)||(1292277-1292312)
chr7 (29-123)||(9710674-9710768)
chr7 (67-121)||(23280853-23280908)
chr7 (105-150)||(9761886-9761932)
chr7 (89-123)||(21211476-21211510)
chr7 (40-125)||(44466302-44466387)
chr7 (28-128)||(4820705-4820804)
chr7 (88-128)||(15574506-15574546)
chr7 (67-123)||(33420979-33421034)
[»] chr4 (37 HSPs)
chr4 (2-128)||(12599972-12600098)
chr4 (1-151)||(23120731-23120882)
chr4 (2-128)||(36470134-36470260)
chr4 (2-151)||(19611138-19611289)
chr4 (1-140)||(29681282-29681422)
chr4 (1-123)||(37986378-37986500)
chr4 (4-145)||(19665567-19665707)
chr4 (2-150)||(16631631-16631782)
chr4 (28-128)||(19621782-19621882)
chr4 (1-129)||(23749742-23749869)
chr4 (40-123)||(24628701-24628784)
chr4 (40-151)||(44397402-44397514)
chr4 (28-150)||(29120560-29120685)
chr4 (67-151)||(14605737-14605824)
chr4 (40-152)||(14905129-14905244)
chr4 (40-152)||(22676364-22676477)
chr4 (29-129)||(10072106-10072206)
chr4 (40-128)||(55379529-55379617)
chr4 (29-150)||(3792527-3792649)
chr4 (55-147)||(15134915-15135009)
chr4 (40-123)||(56033750-56033833)
chr4 (29-123)||(10071726-10071820)
chr4 (89-151)||(41115665-41115729)
chr4 (40-146)||(54679058-54679166)
chr4 (29-108)||(17246847-17246926)
chr4 (88-150)||(3106267-3106329)
chr4 (89-152)||(40859898-40859963)
chr4 (67-128)||(19883910-19883971)
chr4 (29-104)||(3394889-3394964)
chr4 (92-139)||(8686296-8686343)
chr4 (89-155)||(11914859-11914927)
chr4 (88-150)||(15560463-15560527)
chr4 (92-128)||(6640909-6640945)
chr4 (95-150)||(22089478-22089534)
chr4 (29-123)||(13576941-13577035)
chr4 (88-150)||(17399531-17399596)
chr4 (40-129)||(11900324-11900411)
[»] scaffold0004 (3 HSPs)
scaffold0004 (2-123)||(378315-378436)
scaffold0004 (68-129)||(219459-219520)
scaffold0004 (88-152)||(210601-210666)
[»] chr3 (53 HSPs)
chr3 (2-123)||(49643574-49643695)
chr3 (28-150)||(15902393-15902516)
chr3 (2-128)||(17667591-17667717)
chr3 (28-152)||(19889775-19889901)
chr3 (2-128)||(13939117-13939243)
chr3 (2-128)||(13781398-13781522)
chr3 (40-123)||(14393843-14393926)
chr3 (6-151)||(29952252-29952401)
chr3 (6-151)||(30001406-30001555)
chr3 (2-152)||(19885889-19886040)
chr3 (2-123)||(20645380-20645501)
chr3 (3-152)||(14954605-14954755)
chr3 (40-152)||(6089923-6090037)
chr3 (2-151)||(8874935-8875087)
chr3 (2-128)||(17239740-17239865)
chr3 (40-152)||(11189189-11189302)
chr3 (2-128)||(16659371-16659499)
chr3 (29-128)||(20628299-20628398)
chr3 (28-150)||(52919622-52919745)
chr3 (40-151)||(12727084-12727197)
chr3 (40-128)||(13823291-13823379)
chr3 (29-150)||(40799085-40799210)
chr3 (2-150)||(1241886-1242035)
chr3 (40-123)||(14968595-14968678)
chr3 (40-123)||(38178493-38178576)
chr3 (40-123)||(41494229-41494311)
chr3 (40-150)||(12963934-12964046)
chr3 (40-152)||(52282989-52283104)
chr3 (80-151)||(28581291-28581364)
chr3 (40-150)||(49554358-49554470)
chr3 (40-115)||(22804869-22804944)
chr3 (40-149)||(2560383-2560494)
chr3 (40-128)||(18122496-18122584)
chr3 (88-150)||(22465376-22465439)
chr3 (40-123)||(29854637-29854719)
chr3 (41-128)||(31302570-31302657)
chr3 (29-152)||(11222740-11222868)
chr3 (90-151)||(12967510-12967574)
chr3 (40-150)||(33582415-33582528)
chr3 (2-152)||(21639094-21639243)
chr3 (2-107)||(50299480-50299584)
chr3 (29-128)||(11222014-11222116)
chr3 (69-128)||(16199925-16199982)
chr3 (89-150)||(19250285-19250348)
chr3 (40-128)||(25399103-25399191)
chr3 (88-152)||(23539121-23539187)
chr3 (89-128)||(26418618-26418657)
chr3 (88-150)||(40850174-40850239)
chr3 (40-152)||(53057573-53057687)
chr3 (29-123)||(46350678-46350772)
chr3 (40-98)||(47206914-47206972)
chr3 (88-150)||(3237891-3237955)
chr3 (55-123)||(16031729-16031797)
[»] chr2 (40 HSPs)
chr2 (4-148)||(20569506-20569652)
chr2 (6-123)||(24575256-24575373)
chr2 (2-152)||(25828347-25828499)
chr2 (2-151)||(17964058-17964209)
chr2 (28-152)||(22257381-22257508)
chr2 (40-152)||(40780502-40780616)
chr2 (2-120)||(10010505-10010623)
chr2 (2-128)||(38630968-38631094)
chr2 (2-151)||(24778524-24778675)
chr2 (29-152)||(28702006-28702131)
chr2 (28-150)||(24851453-24851577)
chr2 (40-150)||(22455752-22455865)
chr2 (2-123)||(39038395-39038516)
chr2 (2-150)||(45087753-45087902)
chr2 (40-122)||(25188627-25188709)
chr2 (29-123)||(13964765-13964859)
chr2 (29-150)||(22188889-22189013)
chr2 (68-151)||(27294684-27294770)
chr2 (40-123)||(21537980-21538063)
chr2 (89-152)||(23185172-23185235)
chr2 (89-152)||(23596435-23596498)
chr2 (89-152)||(22782473-22782538)
chr2 (40-150)||(6391861-6391973)
chr2 (43-112)||(20152790-20152859)
chr2 (40-151)||(6574957-6575059)
chr2 (29-128)||(31801667-31801766)
chr2 (66-128)||(18377042-18377104)
chr2 (81-150)||(24376312-24376384)
chr2 (32-150)||(41122465-41122583)
chr2 (89-151)||(22786497-22786563)
chr2 (92-150)||(28551765-28551825)
chr2 (93-150)||(19539647-19539706)
chr2 (88-140)||(44839640-44839692)
chr2 (29-123)||(28712488-28712582)
chr2 (103-152)||(15671443-15671492)
chr2 (95-128)||(25917933-25917966)
chr2 (89-151)||(31328815-31328879)
chr2 (89-151)||(31335536-31335600)
chr2 (89-150)||(16494541-16494604)
chr2 (29-117)||(23234183-23234271)
[»] chr8 (40 HSPs)
chr8 (2-128)||(12758553-12758679)
chr8 (9-152)||(17007498-17007643)
chr8 (9-152)||(17541307-17541452)
chr8 (2-128)||(19153238-19153364)
chr8 (2-113)||(16682064-16682175)
chr8 (40-150)||(25163261-25163373)
chr8 (40-123)||(20383199-20383282)
chr8 (40-150)||(30422279-30422391)
chr8 (2-128)||(17796631-17796756)
chr8 (28-150)||(39692734-39692855)
chr8 (31-150)||(45539324-45539445)
chr8 (2-85)||(20256323-20256406)
chr8 (29-148)||(23185584-23185703)
chr8 (40-128)||(23264476-23264564)
chr8 (40-151)||(31445291-31445404)
chr8 (40-128)||(18121981-18122069)
chr8 (40-115)||(16206458-16206533)
chr8 (29-150)||(9319761-9319885)
chr8 (29-123)||(15336925-15337018)
chr8 (29-123)||(15425990-15426083)
chr8 (29-123)||(15517294-15517387)
chr8 (15-85)||(20256421-20256491)
chr8 (28-90)||(29692564-29692626)
chr8 (89-154)||(18771883-18771948)
chr8 (68-152)||(16188460-16188544)
chr8 (40-128)||(19942450-19942537)
chr8 (28-128)||(36104559-36104658)
chr8 (76-152)||(18676845-18676923)
chr8 (89-128)||(19706727-19706766)
chr8 (89-151)||(19957235-19957300)
chr8 (82-120)||(17914338-17914376)
chr8 (67-120)||(21932097-21932151)
chr8 (88-152)||(22672966-22673031)
chr8 (93-150)||(13431520-13431579)
chr8 (88-151)||(14990984-14991050)
chr8 (95-151)||(1210604-1210662)
chr8 (95-154)||(40846308-40846369)
chr8 (29-98)||(17442685-17442754)
chr8 (101-151)||(43773307-43773359)
chr8 (95-152)||(17287067-17287126)
[»] chr5 (32 HSPs)
chr5 (1-123)||(6513221-6513343)
chr5 (1-152)||(6498509-6498660)
chr5 (2-123)||(17814187-17814308)
chr5 (40-152)||(31487401-31487515)
chr5 (40-150)||(22000857-22000969)
chr5 (40-123)||(23413806-23413889)
chr5 (40-151)||(90263-90376)
chr5 (40-128)||(7746526-7746614)
chr5 (2-123)||(21075976-21076096)
chr5 (2-150)||(19546323-19546469)
chr5 (40-150)||(12353693-12353801)
chr5 (67-152)||(21100607-21100694)
chr5 (40-123)||(9399443-9399526)
chr5 (89-152)||(21199890-21199955)
chr5 (29-150)||(30742135-30742257)
chr5 (2-128)||(33932486-33932611)
chr5 (3-123)||(13546319-13546440)
chr5 (29-151)||(37395361-37395485)
chr5 (28-128)||(11993108-11993207)
chr5 (68-123)||(13736964-13737019)
chr5 (40-128)||(31117094-31117182)
chr5 (90-128)||(21207686-21207724)
chr5 (95-151)||(26120704-26120761)
chr5 (28-128)||(15516187-15516286)
chr5 (89-129)||(31146482-31146522)
chr5 (29-108)||(33021898-33021977)
chr5 (89-148)||(25097920-25097981)
chr5 (89-148)||(25157012-25157073)
chr5 (95-150)||(31589879-31589936)
chr5 (89-123)||(35932885-35932919)
chr5 (88-150)||(3246339-3246403)
chr5 (88-124)||(10847995-10848031)
[»] scaffold0084 (2 HSPs)
scaffold0084 (1-150)||(31786-31937)
scaffold0084 (28-152)||(48510-48637)
[»] scaffold0567 (1 HSPs)
scaffold0567 (40-151)||(9097-9207)
[»] scaffold0026 (1 HSPs)
scaffold0026 (2-150)||(7076-7226)
[»] scaffold0171 (1 HSPs)
scaffold0171 (2-124)||(28194-28315)
[»] scaffold0035 (2 HSPs)
scaffold0035 (28-129)||(20255-20356)
scaffold0035 (88-128)||(110441-110481)
[»] scaffold0210 (1 HSPs)
scaffold0210 (40-151)||(816-930)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-128)||(14335-14460)
[»] scaffold0479 (1 HSPs)
scaffold0479 (40-129)||(9186-9275)
[»] scaffold0163 (1 HSPs)
scaffold0163 (40-128)||(25649-25737)
[»] scaffold0337 (1 HSPs)
scaffold0337 (2-113)||(14203-14314)
[»] scaffold0065 (1 HSPs)
scaffold0065 (2-113)||(1245-1356)
[»] scaffold0315 (1 HSPs)
scaffold0315 (42-123)||(7895-7976)
[»] scaffold0005 (1 HSPs)
scaffold0005 (67-151)||(211554-211641)
[»] scaffold0290 (1 HSPs)
scaffold0290 (29-152)||(19445-19571)
[»] scaffold0116 (1 HSPs)
scaffold0116 (54-152)||(21751-21851)
[»] scaffold0023 (1 HSPs)
scaffold0023 (40-149)||(102752-102864)
[»] scaffold0205 (1 HSPs)
scaffold0205 (29-150)||(743-866)
[»] scaffold0115 (1 HSPs)
scaffold0115 (2-121)||(17557-17677)
[»] scaffold0859 (1 HSPs)
scaffold0859 (40-150)||(2166-2278)
[»] scaffold0471 (1 HSPs)
scaffold0471 (28-150)||(2651-2774)
[»] scaffold0439 (1 HSPs)
scaffold0439 (40-128)||(7511-7598)
[»] scaffold0161 (2 HSPs)
scaffold0161 (40-119)||(10909-10989)
scaffold0161 (40-119)||(15573-15653)
[»] scaffold0081 (1 HSPs)
scaffold0081 (89-150)||(13191-13254)
[»] scaffold0009 (2 HSPs)
scaffold0009 (67-125)||(83584-83643)
scaffold0009 (67-123)||(83522-83579)
[»] scaffold1747 (1 HSPs)
scaffold1747 (89-157)||(510-581)
[»] scaffold1745 (1 HSPs)
scaffold1745 (89-157)||(830-901)
[»] scaffold0359 (1 HSPs)
scaffold0359 (40-152)||(6526-6641)
[»] scaffold0138 (1 HSPs)
scaffold0138 (67-128)||(16207-16268)
[»] scaffold0056 (2 HSPs)
scaffold0056 (88-152)||(26499-26566)
scaffold0056 (88-122)||(35593-35627)
[»] scaffold0036 (1 HSPs)
scaffold0036 (40-128)||(111402-111490)
[»] scaffold1359 (1 HSPs)
scaffold1359 (40-123)||(8-91)
[»] scaffold0040 (1 HSPs)
scaffold0040 (89-128)||(2919-2958)
[»] scaffold0498 (1 HSPs)
scaffold0498 (89-123)||(1058-1092)
[»] scaffold0364 (1 HSPs)
scaffold0364 (40-148)||(5372-5481)
[»] scaffold0330 (1 HSPs)
scaffold0330 (67-128)||(500-561)
[»] scaffold0251 (1 HSPs)
scaffold0251 (29-125)||(7053-7150)
[»] scaffold0028 (2 HSPs)
scaffold0028 (28-150)||(24566-24689)
scaffold0028 (89-129)||(80583-80623)
[»] scaffold0018 (1 HSPs)
scaffold0018 (80-151)||(50479-50553)
[»] scaffold1657 (1 HSPs)
scaffold1657 (89-153)||(1011-1077)
[»] scaffold0598 (1 HSPs)
scaffold0598 (89-128)||(2635-2674)
[»] scaffold0064 (1 HSPs)
scaffold0064 (89-120)||(44714-44745)
[»] scaffold0758 (1 HSPs)
scaffold0758 (95-152)||(3511-3568)
[»] scaffold0488 (1 HSPs)
scaffold0488 (88-150)||(11396-11460)
[»] scaffold0217 (1 HSPs)
scaffold0217 (28-128)||(18256-18357)
[»] scaffold0607 (1 HSPs)
scaffold0607 (88-128)||(5354-5394)
[»] scaffold0280 (1 HSPs)
scaffold0280 (28-128)||(3473-3572)
[»] scaffold0011 (1 HSPs)
scaffold0011 (88-128)||(66254-66294)


Alignment Details
Target: chr1 (Bit Score: 180; Significance: 3e-97; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 28493054 - 28493304
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||||||||||||||| |||||||||||||| ||||||| ||||| ||| ||||  |||||||||||||||||||| ||||    
T  28493054 tctctctctgttttatccgctgttacttagttctgaaaatcacttcagaagcagaactctatttgcttatgatctgtgttttcaccttaggagaagacga 28493153  T
Q  102 agaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaatgatatcaatgtcattttatcaaaggctaaagagtcctttggctatgaga 201  Q
    ||||||| |||||||||||||| ||||  |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28493154 agaaaaaactaacacaattcaacccccc-ttgtatttttctcaccttcaatgatatcaatgtcattttatcaaaggctaaagagtcctttggctatgaga 28493252  T
Q  202 tttaggtctctcaaagacaaattaatttatcgtgttcttaagtagttcatgt 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28493253 tttaggtctctcaaagacaaattaatttatcgtgtccttaagtagttcatgt 28493304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 22202615 - 22202765
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||  ||||||||||||||    
T  22202615 tctctctctgttttatccgctgctatttagttctggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacga 22202714  T
Q  102 agaaaaagctaacacaattcaaacccct-gttgtgtttttgtcaccttcaa 151  Q
    |||||||| ||||||||||||| |||||  |||||||||| ||||||||||    
T  22202715 agaaaaagataacacaattcaaccccctccttgtgtttttctcaccttcaa 22202765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 33257102 - 33257223
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||| | || |||||||||||||||||||||||| || || |||| ||||| ||||||||  ||||||||| ||||||||||| |||    
T  33257102 tctctctctgttttatctgctgctacttagttctggaaatcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcga 33257201  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  33257202 agaaaaagctaacacaattcaa 33257223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 33277274 - 33277395
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||| | || |||||||||||||||||||||||| || || |||| ||||| ||||||||  ||||||||| ||||||||||| |||    
T  33277274 tctctctctgttttatctgctgctacttagttctggaaatcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcga 33277373  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  33277374 agaaaaagctaacacaattcaa 33277395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 153
Target Start/End: Complemental strand, 48703596 - 48703444
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || ||||||||||| |||||||| |||||| || |||| |||||  ||||||| |||||||||| |||| |||| || ||    
T  48703596 tctctctctgttttatccgctgctacttagttcttgaaatcacgtcagaagcaaaactctatttgtttctgataagtgttttcagcttaagagataagga 48703497  T
Q  102 agaaaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttcaatg 153  Q
    |||||||  ||||||||||||| |||| | || ||||||| ||||||||||||    
T  48703496 agaaaaaattaacacaattcaaccccctttttatgtttttctcaccttcaatg 48703444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 22202493 - 22202600
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||  ||||||||||||||    
T  22202493 tctctctctgttttatccgctgctatttagttctggaaatcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacga 22202592  T
Q  102 agaaaaag 109  Q
    ||||||||    
T  22202593 agaaaaag 22202600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 30892409 - 30892260
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    ||||||||| || |||||||||  | ||||||||| | ||||||| ||||  |||||| ||||| |||||||| |||||||||| ||||| ||||| |||    
T  30892409 tctctctctattttatccgttgc-atttagttctgaacatcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcga 30892311  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  30892310 agaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 30892260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 20959829 - 20959912
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaa 151  Q
    |||||||| |||||||||| |||||||||||||||||||||| |||||||||||| ||||||  |||||||||| ||||||||||    
T  20959829 cttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattc-aaccccccttgtgtttttctcaccttcaa 20959912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 2833974 - 2833872
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  ||| || ||| | |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  2833974 tagttctgaacatcacttcagaagtagagctctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 2833875  T
Q  129 tgt 131  Q
    |||    
T  2833874 tgt 2833872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 140
Target Start/End: Complemental strand, 1899654 - 1899554
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttt 139  Q
    ||||||| ||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||  |||||||||||| ||||| |||||||||    
T  1899654 atcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaacccccttttgtgtttt 1899555  T
Q  140 t 140  Q
    |    
T  1899554 t 1899554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 7309136 - 7308986
Alignment:
Q  2 tctctctctgttct-atccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    |||||||||||| | ||||| ||  ||||||| ||| | ||||||| |||| ||||| | ||||| |||||||| ||||||||||  |||||||||||||    
T  7309136 tctctctctgtttttatccgctgcaacttagtcctgaacatcactttagaagcagaattctatttgcttctgatcagtgttttcag-ttaggagaaaacg 7309038  T
Q  101 aagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||| | |||||||||||| ||||  | |||||||||| |||||||||    
T  7309037 aagaaaaaaccaacacaattcaaccccccttcttgtgtttttctcaccttca 7308986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 150
Target Start/End: Complemental strand, 12283665 - 12283590
Alignment:
Q  76 agtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa-acccctgttgtgtttttgtcaccttca 150  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| | || | |||||||||| |||||||||    
T  12283665 agtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacatccttcttgtgtttttctcaccttca 12283590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 22428098 - 22428193
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||| | |||| |||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||    
T  22428098 ttagttctgaacatcatttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaa 22428193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 10756778 - 10756657
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| ||  | ||||||||| | |||||| |||||  |||| ||||| | ||||| || |||||||||| ||||| ||||||||    
T  10756778 ttctctctctgttttatccgctgc-atttagttctgaacatcactccagaagtagaattttatatacttctaatcagtgttttcaacttagaagaaaacg 10756680  T
Q  101 aagaaaaagctaacacaattcaa 123  Q
    |||||||| ||||||||||||||    
T  10756679 aagaaaaaactaacacaattcaa 10756657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 32786710 - 32786822
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||   ||||||||| | |||||||| ||||||| || |||||||||||| ||| ||||| |||||||||||||| ||||  | |||||||    
T  32786710 atcacttcagaagtggaactttatctgcttctgatcagtgtttacaacttaggagaaaaagaaaaaaaatctaacacaattcaaccccccttcttgtgtt 32786809  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  32786810 tttctcaccttca 32786822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 14294081 - 14294164
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttca 150  Q
    |||||||| |||||||||| |||||||||||| ||||||||||| ||||||||| |  ||| | |||||||||| |||||||||    
T  14294081 cttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaattaacccccttcttgtgtttttctcaccttca 14294164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 22153133 - 22153021
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |  ||||||| || ||||||||| ||||||||||| |||||||||||| ||||  | |||||||    
T  22153133 atcacttcagaagtagaactctatctgcttctgatcaaagttttcagctaaggagaaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtt 22153034  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  22153033 tttctcaccttca 22153021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 25449347 - 25449471
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||||||||||  | |||| ||| | |||||||| ||||||||||  ||||||||||| ||| ||| ||| |||||||||||| |||    
T  25449347 ttagttctgaacatcacttcagaagtataactctatctgcttctgatcagtgttttca-gttaggagaaaaagaaaaaatagccaacacaattcaacccc 25449445  T
Q  128 c-tgttgtgtttttgtcaccttcaat 152  Q
    | | |||||||||| |||||||||||    
T  25449446 cttcttgtgtttttctcaccttcaat 25449471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 38281670 - 38281581
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    ||||||||||||  |||||| ||| |  ||||||| |||||||||| |||||||||||| ||||||||||| |||||||| ||| |||||    
T  38281670 atcacttcagaagtagaactatatctgtttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaatccaaccccct 38281581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 29215118 - 29214994
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa-accc 127  Q
    |||||||| | ||||||||||||   ||||| ||| | |||||||| |||||||||| ||||| |||||| ||||||||| |||| ||||||||| ||||    
T  29215118 tagttctgaatatcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaactaatacaattcaacaccc 29215019  T
Q  128 c-tgttgtgtttttgtcaccttcaa 151  Q
    | | || ||||||| ||||||||||    
T  29215018 cttcttatgtttttctcaccttcaa 29214994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 109
Target Start/End: Complemental strand, 2266393 - 2266324
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaag 109  Q
    ||||||||||||  |||||| ||| |  ||||||| |||||||||| |||||||||||||||||||||||    
T  2266393 atcacttcagaagtagaactctatctgattctgatcagtgttttcagcttaggagaaaacgaagaaaaag 2266324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 1577156 - 1577068
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| | || ||||||| ||||||||| | |||||||||||| ||||    
T  1577156 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaattcaaccccc 1577068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 22600958 - 22601046
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| |  ||||||| | ||||||||  ||||||||||| ||||||||||| |||||||||||| ||||    
T  22600958 atcacttcagaagtagaactctatctgattctgatcaatgttttcaggttaggagaaaaagaagaaaaagccaacacaattcaaccccc 22601046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 23037295 - 23037383
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||| || |||| ||||||||||| ||| |||||||| ||||    
T  23037295 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttatgataaaaagaagaaaaagccaacccaattcaaccccc 23037383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 22465611 - 22465696
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||| |||||||||| |||||||| ||||||| ||||||  |||||||||||| ||||  | |||| ||||| |||||||||    
T  22465611 cttctgatcagtgttttcagcttaggagtaaacgaataaaaagtaaacacaattcaaccccccttcttgtatttttctcaccttca 22465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 36133487 - 36133430
Alignment:
Q  71 tgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||| |||||||||| |||| ||||||| ||||||||||| |||||||||||| ||||    
T  36133487 tgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaaccccc 36133430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 12625367 - 12625430
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaac--ccctgttgtgtttttgtcaccttca 150  Q
    |||||||||||||||||||| |||||||||||||| |  || | |||||||||| |||||||||    
T  12625367 taggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtgtttttctcaccttca 12625430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 21121871 - 21121911
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  21121871 ttaggagaaaaagaagaaaaagctaacacaattcaaccccc 21121911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 21192703 - 21192769
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaat 152  Q
    ||||||||||||||||||||||| ||||||||||| ||||   | ||||||||||  ||||||||||    
T  21192703 taggagaaaacgaagaaaaagcttacacaattcaacccccccttcttgtgtttttcgcaccttcaat 21192769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 21205676 - 21205716
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  21205676 ttaggagaaaaagaagaaaaagctaacacaattcaaccccc 21205716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 21215491 - 21215531
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  21215491 ttaggagaaaaagaagaaaaagctaacacaattcaaccccc 21215531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 21135977 - 21136012
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||| ||||||||||||||||||||||||    
T  21135977 ttaggagaaaaagaagaaaaagctaacacaattcaa 21136012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 18614172 - 18614138
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||||||| |||||||    
T  18614172 taggagaaaacgaagaaaaagctaacataattcaa 18614138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 44824488 - 44824612
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||||||| | ||| ||||||||  ||||||  || | ||||||||  |||||||||  ||||||||||| ||    
T  44824488 tctctctctgttttatccgctgcaa-ttagttctgaacatctcttcagaagtagaactacatctgcttctgatctgtgttttcag-ttaggagaaaaaga 44824585  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||| || |||||||||||| ||||    
T  44824586 agaaaaggccaacacaattcaaccccc 44824612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 17025821 - 17025885
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||| |||||||| |||||||||||||| ||||  | |||||||||| |||| |||||    
T  17025821 taggagaaaacaaagaaaaatctaacacaattcaaccccccttcttgtgtttttctcactttcaa 17025885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 26555630 - 26555597
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattca 122  Q
    |||||||||| |||||||||||||||||||||||    
T  26555630 taggagaaaaagaagaaaaagctaacacaattca 26555597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 2780 - 2904
Alignment:
Q  4 tctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaag 103  Q
    |||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||| ||||| |||||||| |||||||||| |||||||||||||||||    
T  2780 tctctctgttttatccgttgctacttagttctagaaatcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaag 2879  T
Q  104 aaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||| ||||    
T  2880 aaaaagctaacacaattcaaccccc 2904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 36772 - 36624
Alignment:
Q  6 tctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaa 105  Q
    |||||||| ||| || || ||||||||||||| ||||||||||||| ||||||||||||| ||| |||| |||||||||| |||||||||||||||||||    
T  36772 tctctgttttattcgctgctacttagttctgggaatcacttcagaaacagaactttatttgcttatgattagtgttttcagcttaggagaaaacgaagaa 36673  T
Q  106 aaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  36672 aaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaat 36624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 152
Target Start/End: Complemental strand, 134832 - 134684
Alignment:
Q  6 tctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaa 105  Q
    |||||||| ||| || || ||||||||||||| ||||||||||||| ||||||||||||| ||| |||| |||||||||| |||||||||||||||||||    
T  134832 tctctgttttattcgctgctacttagttctgggaatcacttcagaaacagaactttatttgcttatgattagtgttttcagcttaggagaaaacgaagaa 134733  T
Q  106 aaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  134732 aaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaat 134684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 158455 - 158375
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaatt 120  Q
    ||||||||||||   ||||| ||| | ||||| || |||| ||||| ||||||| ||||||||||| |||| |||||||||    
T  158455 atcacttcagaagtggaactctatctgcttctaataagtgatttcagcttaggataaaacgaagaataagcaaacacaatt 158375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 5e-40; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 15301563 - 15301413
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||| |||||||||||| |||| ||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  15301563 tctctctctgttttatccgctgctatttagttatggaaatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacga 15301464  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  15301463 agaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 15301413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 13601512 - 13601362
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||| | || ||||||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||||||||||| |    
T  13601512 tctctctctgttttatctgctgctacttagttctggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacta 13601413  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||||||||| |||||| ||||  | ||||||| || |||||||||    
T  13601412 agaaaaagctaacacgattcaaccccccttcttgtgttattctcaccttca 13601362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 25593416 - 25593269
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||||||||||||||| || || |||| ||||| |||||||| |||||||||| |||||||||||||||    
T  25593416 tctctctctgttttatccgctgctatttagttctggaaatcacttcataagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacga 25593317  T
Q  102 agaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttca 150  Q
    |||||||  ||||||||||||| ||||  |||||||||| |||||||||    
T  25593316 agaaaaa-ataacacaattcaacccccccttgtgtttttctcaccttca 25593269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 14732945 - 14733045
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    |||||| ||||||||||||||||| || |||| |||||  ||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| |||    
T  14732945 ttagttttggaaatcacttcagaagcataactctatttgtttctgatcagtgtttttagcttaggagaaaacgaagaaaaagctaacacaattcaacccc 14733044  T
Q  128 c 128  Q
    |    
T  14733045 c 14733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 121
Target Start/End: Original strand, 12716250 - 12716369
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || |  |||||||||||||||||||||||| ||||||| |||||  |||| || |||||||||| |||||||||| ||||    
T  12716250 tctctctctgttttatccgctgatgtttagttctggaaatcacttcagaagcagaactatatttgtttcttattagtgttttcagcttaggagaagacga 12716349  T
Q  102 agaaaaagctaacacaattc 121  Q
    ||||||| | ||||||||||    
T  12716350 agaaaaatcaaacacaattc 12716369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 17380870 - 17380757
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||||| |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||   | ||||||    
T  17380870 atcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccccttcttgtgt 17380771  T
Q  137 ttttgtcaccttca 150  Q
    |||| |||||||||    
T  17380770 ttttctcaccttca 17380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 14101286 - 14101398
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||| ||  |||||| ||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| ||||  | |||||||    
T  14101286 atcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccctttcttgtgtt 14101385  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  14101386 tttctcaccttca 14101398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 16528622 - 16528511
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | ||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| ||||   | ||||||    
T  16528622 atcacttcagaaatagaactctatctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgtgt 16528523  T
Q  137 ttttgtcacctt 148  Q
    |||| |||||||    
T  16528522 ttttctcacctt 16528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 19085439 - 19085327
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    |||||||||||| ||||||| ||||| ||||| || |||||||||| |||| ||||||||||||||||||| |||||||||||| ||||  | |||||||    
T  19085439 atcacttcagaagcagaactctatttgcttcttatcagtgttttcagcttatgagaaaacgaagaaaaagccaacacaattcaaccccccttcttgtgtt 19085340  T
Q  138 tttgtcaccttca 150  Q
    |||  ||||||||    
T  19085339 tttcacaccttca 19085327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 19623306 - 19623206
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | |||||||||||| ||| ||| ||||| |||||||| |||||||| | |||||||||||||||||||||||| |||| ||||||| |||    
T  19623306 ttagttctgaacatcacttcagaagcaggactctatttgcttctgatcagtgtttttagcttaggagaaaacgaagaaaaagccaacataattcaacccc 19623207  T
Q  128 c 128  Q
    |    
T  19623206 c 19623206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 10631444 - 10631361
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  10631444 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaa 10631361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 13435192 - 13435078
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||| ||||  | |||| ||    
T  13435192 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtttt 13435093  T
Q  138 tttgtcaccttcaat 152  Q
    ||| |||||||||||    
T  13435092 tttctcaccttcaat 13435078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 15532472 - 15532555
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||||| || ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||    
T  15532472 atcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaa 15532555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 20113463 - 20113564
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatga-gtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacc 126  Q
    ||||||||| | ||||||||||||  |||||| ||| | |||||||| | ||||||||| |||||||||||||||||||||||| |||||||||||| ||    
T  20113463 ttagttctgaacatcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccc 20113562  T
Q  127 cc 128  Q
    ||    
T  20113563 cc 20113564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 32543581 - 32543457
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac--c 126  Q
    |||||||| | ||||||||||||   ||||| ||| | |||||||| ||||||||||  ||||||||||| |||||||||||||||||||||||| |  |    
T  32543581 tagttctgaacatcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaaaagaagaaaaagctaacacaattcaaccctc 32543482  T
Q  127 cctgttgtgtttttgtcaccttcaa 151  Q
    | | |||||||||| ||||||||||    
T  32543481 cttcttgtgtttttctcaccttcaa 32543457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 21234474 - 21234375
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||| | ||| | |||||||| |||||||||| |||||||||||| || ||||||||||||||||||||| ||||    
T  21234474 tagttctgaacatcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaaagaggaaaaagctaacacaattcaaccccc 21234375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 21624399 - 21624286
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  | |||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||   | ||||||    
T  21624399 atcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaacccccccttcttgtgt 21624300  T
Q  137 ttttgtcaccttca 150  Q
    |||| |||||||||    
T  21624299 ttttctcaccttca 21624286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 22801461 - 22801339
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||||| | | |||||| |||||  ||||||||||||||||||||||| ||||    
T  22801461 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaattcaaccccc 22801362  T
Q  129 -tgttgtgtttttgtcaccttca 150  Q
     | |||||||||| |||||||||    
T  22801361 ttcttgtgtttttctcaccttca 22801339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 19688040 - 19687927
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||||||| | |||||||| |||||||||| | |||||||||| ||||||||| | |||||||||||| ||||   | ||||||    
T  19688040 atcacttcagaagtagaactttatctgcttctgatcagtgttttcaacataggagaaaa-gaagaaaaaaccaacacaattcaaccccctcttcttgtgt 19687942  T
Q  137 ttttgtcaccttcaa 151  Q
    |||| ||||||||||    
T  19687941 ttttctcaccttcaa 19687927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 29537901 - 29537845
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  29537901 cttctgattagtgttttcagcttaggagtaaacgaagaaaaaactaacacaattcaa 29537845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 18434828 - 18434729
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| ||||||| || ||| |||||||| ||||||||||  |||||||||||| ||||    
T  18434828 tagttctgaacatcacttcagaagtagaactctatctgcttctgattagtgtttccagctttggagaaaatgaagaaaaagtaaacacaattcaaccccc 18434729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 24116122 - 24116047
Alignment:
Q  43 acttcagaatcagaactttattttcttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacaca 117  Q
    ||||||||| ||||||| ||||| |||||||  |||||||| || |||||||||||||||||||||||| ||||||    
T  24116122 acttcagaagcagaactctatttgcttctgaccagtgtttttcaacttaggagaaaacgaagaaaaagccaacaca 24116047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 16333073 - 16332949
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||||||| | ||||||||||||  |||||| ||| | ||||||||  || ||||||  ||||||||||| ||    
T  16333073 tctctctctgttttatccgctggaa-ttagttctgaacatcacttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaaga 16332976  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    ||||||||| |||||||||||| ||||    
T  16332975 agaaaaagccaacacaattcaaccccc 16332949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 122
Target Start/End: Original strand, 20731548 - 20731630
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattca 122  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||| |||||| ||| |||||| ||||||||||||    
T  20731548 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagtagaaaaagaataaaaaggtaacacaattca 20731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 17304108 - 17304194
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||| | ||||| ||| | |||||||| ||||  ||||   ||||||||||||||||||||||||||||||||||| ||||    
T  17304108 atcacttcagaagctgaactctatctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagctaacacaattcaaccccc 17304194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 21617556 - 21617461
Alignment:
Q  44 cttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgttttt 140  Q
    ||||||||  |||||| ||| | ||||||||  |||||||||  ||||||||||| ||||||| ||| |||||||||||| ||||| ||||||||||    
T  21617556 cttcagaagtagaactctatctgcttctgatctgtgttttcag-ttaggagaaaaagaagaaacagccaacacaattcaacccccttttgtgttttt 21617461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 9717133 - 9717050
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||   ||||| ||| | ||| |||| |||||||||| |||||||||||| |||||||| || ||||||||||||    
T  9717133 atcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgcaaacacaattcaa 9717050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 18377745 - 18377646
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| |  || |||| ||| |||||| |||| ||||||| ||||||||||| |||||||||||| ||||    
T  18377745 tagttctgaacatcacttcagaagtagaactctatctgtttttgatcagtattttcagcttatgagaaaaagaagaaaaagccaacacaattcaaccccc 18377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 24717659 - 24717749
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaa--cgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||||   ||||||||||  |||||||||||| ||||    
T  24717659 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaattgaagaaaaagaaaacacaattcaaccccc 24717749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 7762945 - 7762866
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattc 121  Q
    |||||||||||| | ||||| ||| | |||||||| |||| |||||   |||||||||||||||||| ||||||||||||||    
T  7762945 atcacttcagaagctgaactctatctgcttctgatcagtgatttcag--taggagaaaacgaagaaatagctaacacaattc 7762866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 16876227 - 16876107
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | |||||||||||| ||||||| ||| | || ||||| ||||||||||  ||| |||||||  |||||||| | |||| ||||| |||||    
T  16876227 ttagttctgaacatcacttcagaagcagaactctatctactcctgatcagtgttttca-gttaagagaaaaataagaaaaaacaaacataattc-aaccc 16876130  T
Q  128 ctgttgtgtttttgtcaccttca 150  Q
    |  |||||||||| |||||||||    
T  16876129 cccttgtgtttttctcaccttca 16876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 19625035 - 19624971
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||| |||||||||||||||||||||| ||||||| ||||  | |||||||||| |||||||||    
T  19625035 ttaggtgaaaacgaagaaaaagctaacataattcaaccccccgtcttgtgtttttctcaccttca 19624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 15986641 - 15986558
Alignment:
Q  68 ttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttca 150  Q
    ||||||| |||||||| | |||||| |||||||||||||||| ||| ||||||| | |||| | |||||||||| |||| ||||    
T  15986641 ttctgatcagtgtttttagcttaggtgaaaacgaagaaaaagttaatacaattcgacccccttcttgtgtttttctcacattca 15986558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 123
Target Start/End: Complemental strand, 26941710 - 26941630
Alignment:
Q  41 tcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||| ||||| ||| | |||||||| ||||  ||||   | | |||||||||||||||||||||||||||||||    
T  26941710 tcacttcagaatctgaactctatctgcttctgatcagtgacttcag--tggaagaaaacgaagaaaaagctaacacaattcaa 26941630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 19833858 - 19833942
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||| ||||||||||  ||||||||||| || |||||||  |||||||||||| ||||  | |||||||||| |||||||||    
T  19833858 cttctgatcagtgttttcag-ttaggagaaaaagatgaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 19833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 26588845 - 26588794
Alignment:
Q  101 aagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  26588845 aagaaaaagctaacacaattcaacccccattcttgtgtttttctcaccttca 26588794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 13731489 - 13731615
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||  || ||||||||||||||||||||||||||| ||||||| ||||| ||||||||  ||||||||| |||||||||||||||    
T  13731489 tctctctctgttttatccactgctacttagttctggaaatcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaaacga 13731588  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  13731589 agaaaaagctaacacaattcaaccccc 13731615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 13645797 - 13645670
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| || || |||||||||||||||| ||||||| ||||||| ||||| ||||||||  ||||||||| ||||||||||||||    
T  13645797 ttctctctctgttttatccgctgctatttagttctggaaatcagttcagaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaaacg 13645698  T
Q  101 aagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||||||||||||| ||||    
T  13645697 aagaaaaagctaacacaattcaaccccc 13645670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16315349 - 16315471
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    |||||||| |||| |||||| || || || ||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||||||||||||    
T  16315349 ttctctctttgttttatccgctgctattttgttctggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacg 16315448  T
Q  101 aagaaaaagctaacacaattcaa 123  Q
    |||||||| ||||||||||||||    
T  16315449 aagaaaaacctaacacaattcaa 16315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 2914469 - 2914589
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||||||||| |||||||| ||||||| ||||| |||||||| |||||||||| |||||||| ||||||    
T  2914469 tctctctctgttttatccgctgctatttagttctggaaatctcttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggag-aaacga 2914567  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  2914568 agaaaaagctaacacaattcaa 2914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10883982 - 10884134
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    |||||||||| || |||||| || || ||||||||  |||||||||||||| || |||| ||||| |||||||| |||||||||| |||||||||||||     
T  10883982 ttctctctctattttatccgctgctatttagttctcaaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaca 10884081  T
Q  101 aagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  10884082 aagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaa 10884134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 11318740 - 11318588
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| |  ||||||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||| ||||| ||||||| |    
T  11318740 tctctctctgttttatccgctactacttagttctggaaatcacttcagaagccgaactctattttcttctgatcagtgttttcagcttagaagaaaacta 11318641  T
Q  102 agaaaaagctaacacaattcaaac---ccctgttgtgtttttgtcaccttcaa 151  Q
    | ||||||||| |||||||||| |   || | |||||||||| ||||||||||    
T  11318640 aaaaaaagctagcacaattcaacccctccttcttgtgtttttctcaccttcaa 11318588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13302207 - 13302085
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    |||||||| | || |||||| || |||||||| || ||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||||||||||||    
T  13302207 ttctctctttattttatccgctgctacttagtgctagaaatcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacg 13302108  T
Q  101 aagaaaaagctaacacaattcaa 123  Q
    |||||||| ||||||||||||||    
T  13302107 aagaaaaaactaacacaattcaa 13302085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 9069106 - 9068992
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| || || |||||| ||||||||||||||||| || |||||||||| |||||||| |||||||||| ||||||||||||||    
T  9069106 ttctctctctgttttatccgctgctatttagttatggaaatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggagaaaacg 9069007  T
Q  101 aagaaaaagctaacac 116  Q
    ||| ||||||||||||    
T  9069006 aag-aaaagctaacac 9068992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13681641 - 13681519
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    |||||||| |||| |||||| || || |||||||||||||||||||||||| ||||||| ||||| ||||| || | |||||||| ||||||||||||||    
T  13681641 ttctctctttgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatttgcttctaatcaatgttttcagcttaggagaaaacg 13681542  T
Q  101 aagaaaaagctaacacaattcaa 123  Q
    |||||||| |||||| |||||||    
T  13681541 aagaaaaatctaacataattcaa 13681519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 12367571 - 12367721
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||| ||| | ||||||||||||  |||||| ||||| |||||||| ||||||||||||||||||||||||||    
T  12367571 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacga 12367669  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||||||| ||||||||||||| ||||  | |||||||||| ||| ||||||    
T  12367670 agaaaaagataacacaattcaaccccccgtcttgtgtttttctcaacttcaa 12367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 33604223 - 33604098
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||| |||||| ||||| | ||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |||    
T  33604223 ttagttctgaacatcacgtcagaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagccaacacaattcaacccc 33604124  T
Q  128 c--tgttgtgtttttgtcaccttcaa 151  Q
    |  | |||||||||| ||||||||||    
T  33604123 ccttcttgtgtttttctcaccttcaa 33604098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 4493851 - 4493739
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||  | |||||||    
T  4493851 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtt 4493752  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  4493751 tttctcaccttca 4493739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 5001713 - 5001793
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaatt 120  Q
    |||||||||||| ||||||||||||| |||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||    
T  5001713 atcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaaacgaagaaaaagctaacataatt 5001793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 11792215 - 11792065
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||    ||||| ||| | ||||||||||||  |||||  ||| | |||||||| |||||||||| |||||||||||||||    
T  11792215 tctctctctgttttatccgctgcattttagtcctgaacatcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacga 11792116  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||| ||||||||||||| ||||  | |||||||||| |||||||||    
T  11792115 agaaaaagataacacaattcaaccccccttcttgtgtttttctcaccttca 11792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 24787704 - 24787579
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || ||||||||| |||||||||||||||||  |||||| ||||| | ||| || |||||||||| |||||||||||| ||    
T  24787704 tctctctctgttttatccgctgctacttagttatggaaatcacttcagaagaagaactctatttgc-tctaataagtgttttcagcttaggagaaaatga 24787606  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||| | ||| ||||||||| ||||    
T  24787605 agaaaaggttaatacaattcaaccccc 24787579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 16317447 - 16317520
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaa 113  Q
    |||||||||||| ||||||||||||| |||||||| |||||||||| |||| ||||||||||||||||||||||    
T  16317447 atcacttcagaagcagaactttatttgcttctgatcagtgttttcagcttatgagaaaacgaagaaaaagctaa 16317520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 16546188 - 16546276
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||||||| | |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  16546188 atcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 16546276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 16619474 - 16619386
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||||||| | |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  16619474 atcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 16619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 13261526 - 13261636
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    |||||||||||| ||||||| ||||| |||||||| | ||| |||| |||||||||||||||||||||||  |||||||||||| ||||  | |||||||    
T  13261526 atcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtt 13261625  T
Q  138 tttgtcacctt 148  Q
    ||| |||||||    
T  13261626 tttctcacctt 13261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 30025227 - 30025126
Alignment:
Q  54 agaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttca 150  Q
    |||||||||| | |||||||| | |||||||| |||||||||||||||||||||||| |||||||||||| ||||   | |||||||||| |||||||||    
T  30025227 agaactttatctgcttctgatcaatgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaacccccccttcttgtgtttttctcaccttca 30025128  T
Q  151 at 152  Q
    ||    
T  30025127 at 30025126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 2499335 - 2499223
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    |||| |||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| |||||||||| ||||||||||||| ||||  | |||||||    
T  2499335 atcatttcagaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaagttaacacaattcaatcccccttcttgtgtt 2499236  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  2499235 tttctcaccttca 2499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 13259294 - 13259406
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||| |||| ||||||| |||||  ||||||| |||||| ||| |||||||||||||||||||||||  |||||||||||| ||||  | |||||||    
T  13259294 atcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtt 13259393  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  13259394 tttctcaccttca 13259406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 21691731 - 21691617
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc----tgttgtg 135  Q
    ||||||||||||  |||||||||| | |||||||| |||||||||| |||||||||||| | ||||||||| |||||||||||| ||||    | |||||    
T  21691731 atcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaattcaaccccccctttcttgtg 21691632  T
Q  136 tttttgtcaccttca 150  Q
    ||||| |||||||||    
T  21691631 tttttctcaccttca 21691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 16310806 - 16310889
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||| ||||| | ||||| |||||||| |||||||||| || |||| |||||||| ||||||||||||||||||||    
T  16310806 atcacttcagaagcagaattatatttgcttctgattagtgttttcagctaaggacaaaacgaaaaaaaagctaacacaattcaa 16310889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 41843261 - 41843356
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||| | ||||||||||||  |||||| | | | |||||||| |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  41843261 ttagttctgaacatcacttcagaagtagaactctttctgcttctgatcagtgttttcagcttaagagaaaacgaagaaaaaggtaacacaattcaa 41843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 13034666 - 13034818
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  |||||||  || | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||    
T  13034666 tctctctctgttttatccgctgcaacttagtcatgaacatcacttcagaagtagaactgtatctgcttctgatcagtgttttcagcttaggagaaaatga 13034765  T
Q  102 ag-aaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttca 150  Q
    || |||||  ||||||||||||| ||||   | |||||||||| |||||||||    
T  13034766 agaaaaaaaataacacaattcaacccccccttcttgtgtttttatcaccttca 13034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 28623193 - 28623287
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| ||||| |||| |||||||||||| ||||||||||| ||||||||||||    
T  28623193 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaattcaa 28623287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 29936196 - 29936274
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaa 118  Q
    |||||||||||| ||||||| ||||| |||||||| | |||||||| |||| ||||||||||||||||||| |||||||    
T  29936196 atcacttcagaagcagaactctatttgcttctgatcaatgttttcatcttacgagaaaacgaagaaaaagcaaacacaa 29936274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 13473338 - 13473426
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||||| || ||||||||||| |||||    
T  13473338 atcacttcagaagtagaactatatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaact-acacaattcaagcccct 13473426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 15467195 - 15467134
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| |||||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  15467195 cttctgatcagtgttttcagcttaggagaaaaagaagaaaaagataacacaattcaaacccc 15467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 21284225 - 21284337
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||| |||||| ||||||||  |||||||||||| ||||  | |||||||    
T  21284225 atcacttcagaaatagaactctatctgcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaattcaaccccccttcttgtgtt 21284324  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  21284325 tttctcaccttca 21284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 16557466 - 16557573
Alignment:
Q  45 ttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgt 142  Q
    |||||||  |||||| ||| | |||||||| |||||||||| ||||||||| || ||||||||||| |||||||||||| ||||  | |||||||||| |    
T  16557466 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttct 16557565  T
Q  143 caccttca 150  Q
    ||||||||    
T  16557566 caccttca 16557573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 16608196 - 16608089
Alignment:
Q  45 ttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgt 142  Q
    |||||||  |||||| ||| | |||||||| |||||||||| ||||||||| || ||||||||||| |||||||||||| ||||  | |||||||||| |    
T  16608196 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttct 16608097  T
Q  143 caccttca 150  Q
    ||||||||    
T  16608096 caccttca 16608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 22580094 - 22580193
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | |||| |||||||  |||||||||| | ||| |||| |||||||||| | |||||||||| ||||||||||| |||||||||||| ||||    
T  22580094 tagttctgaacatcagttcagaagtagaactttatctgcttttgatcagtgttttcagcataggagaaaaagaagaaaaagccaacacaattcaaccccc 22580193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 35954751 - 35954850
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  | |||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||  |||||||||||| ||||    
T  35954751 tagttctgaatatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagtcaacacaattcaaccccc 35954850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 12175148 - 12175296
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  ||| ||||||| | ||||||||| ||  |||| ||||| | |||||||| |||||||||| ||| ||||||||  |    
T  12175148 tctctctctgttttatccgctgcaact-agttctgaacatcacttcaaaagtagaaatttatctgcttctgatcagtgttttcaactttggagaaaaaca 12175246  T
Q  102 agaaaaagctaacacaattcaaacccctg-ttgtgtttttgtcaccttca 150  Q
    ||||||| | |||||||||||| |||| | |||||||||| | |||||||    
T  12175247 agaaaaaaccaacacaattcaaccccccgcttgtgtttttcttaccttca 12175296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 14186993 - 14186878
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||| | ||| | |||||||| |||||||||| | |||||||||| ||||||||||  |||||||||||| ||||   | ||||||    
T  14186993 atcacttcagaagtagaattctatctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaattcaacccccccttcttgtgt 14186894  T
Q  137 ttttgtcaccttcaat 152  Q
    |||| |||||||||||    
T  14186893 ttttctcaccttcaat 14186878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 19328861 - 19328950
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    ||||||||||||  |||||| ||| | ||| |||| |||||||||| ||| |||||||| ||||||||||| |||||||||||| |||||    
T  19328861 atcacttcagaagtagaactctatctgcttgtgatcagtgttttcagctttggagaaaaagaagaaaaagccaacacaattcaaccccct 19328950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 13879450 - 13879362
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| | || ||||||| ||||||||||| |||||||||||| ||||    
T  13879450 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaattcaaccccc 13879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 13027802 - 13027916
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa--acccctgttgtgtt 137  Q
    ||||||| ||||  |||||| ||| | |||||||| | |||||||  |||||||||||| ||||||||||| ||||||||||||   ||| | |||||||    
T  13027802 atcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaattcaacctcccttcttgtgtt 13027901  T
Q  138 tttgtcaccttcaat 152  Q
    ||| |||||||||||    
T  13027902 tttctcaccttcaat 13027916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 13138776 - 13138889
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | |||||||| | |||||||| | || ||||||| ||||||||||| |||||||||||| ||||   | ||||||    
T  13138776 atcacttcagaagtagaactctatctgcttctgatcaatgttttcagcataagagaaaaagaagaaaaagccaacacaattcaaccccctcttcttgtgt 13138875  T
Q  137 ttttgtcaccttca 150  Q
    |||| |||||||||    
T  13138876 ttttctcaccttca 13138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 151
Target Start/End: Original strand, 33692562 - 33692687
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattcaa--ac 125  Q
    |||||||| | ||||||||||||   ||||| ||| | |||||||| | |||||| || |||||||||||| |||||||||| |||||||||||||   |    
T  33692562 tagttctgaacatcacttcagaagtggaactctatctacttctgatcaatgtttttcagcttaggagaaaaggaagaaaaagttaacacaattcaactcc 33692661  T
Q  126 ccctgttgtgtttttgtcaccttcaa 151  Q
    || | |||||||||| ||||||||||    
T  33692662 cctttttgtgtttttctcaccttcaa 33692687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 48237687 - 48237769
Alignment:
Q  41 tcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||  |||||| ||| | |||||||| |||||||||| |||| ||||||| ||||||||||  ||||||||||||    
T  48237687 tcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaagagaaaaagaagaaaaagtcaacacaattcaa 48237769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 14424614 - 14424526
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  ||||||  || | |||||||| |||||||| |  ||||||||||||||||||||||  |||||||||||| ||||    
T  14424614 atcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaaccccc 14424526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 15705349 - 15705432
Alignment:
Q  44 cttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||  |||||| ||||| ||||||||  |||||||||  ||||||||||| ||||||||||| |||||||||||| ||||    
T  15705349 cttcagaagtagaactctatttgcttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccc 15705432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 13902553 - 13902587
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||||||||||||||||||||||||||    
T  13902553 taggagaaaacgaagaaaaagctaacacaattcaa 13902587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 123
Target Start/End: Complemental strand, 1292312 - 1292277
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1292312 ttaggagaaaaagaagaaaaagctaacacaattcaa 1292277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 9710674 - 9710768
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtg-ttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||| |||||| |||||||||||| |||  |||||| ||||||||||||    
T  9710674 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaacacaattcaa 9710768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 23280853 - 23280908
Alignment:
Q  67 cttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattc 121  Q
    |||||||| |||||||| || |||||||||||| ||||||||| ||||||||||||    
T  23280853 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaatctaacacaattc 23280908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 9761932 - 9761886
Alignment:
Q  105 aaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttca 150  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||    
T  9761932 aaaagctaacacaattcaaaccccttcttgtgtttttctcaccttca 9761886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 21211476 - 21211510
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||||| ||||||||||||||||||||    
T  21211476 taggagaaaacgaataaaaagctaacacaattcaa 21211510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 44466387 - 44466302
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac 125  Q
    |||||||||||   ||||||||||||  || |||| | |||||||  ||| |||||||| ||||||||| | ||||||||||||||    
T  44466387 atcacttcagaggtagaactttatttgtttttgatcaatgttttcggcttcggagaaaaagaagaaaaaaccaacacaattcaaac 44466302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 4820804 - 4820705
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||||||| ||  |||||| ||| | |||||||| ||||||||||  ||| ||||||  ||| ||||||| |||||||||||| |||    
T  4820804 ttagttctgaacatcacttcaaaagtagaactctatctgcttctgattagtgttttcag-ttatgagaaattgaataaaaagcaaacacaattcaacccc 4820706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 15574506 - 15574546
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  15574506 ttaggagaaaaagaagaaaaagccaacacaattcaaccccc 15574546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 33421034 - 33420979
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||  |||||||||  ||||||||||| ||||||||||| ||||||||||||    
T  33421034 cttctgatctgtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaa 33420979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 12600098 - 12599972
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||||| |||||||||||||||  |||||||||||| |||||||| |||||||||| |||||||||||||||    
T  12600098 tctctctctgttttatccgctgctatttagttctagaaatcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaaacga 12599999  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  12599998 agaaaaagctaacacaattcaatcccc 12599972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 23120882 - 23120731
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgtttt-caccttaggagaaaac 99  Q
    ||||||||||||| ||| |  || ||||||||||||||||||||||||||| ||||||| ||||| |||||||| ||| |||| || ||||||||||||     
T  23120882 ttctctctctgttttatacactgctacttagttctggaaatcacttcagaagcagaactctatttgcttctgattagtctttttcagcttaggagaaaat 23120783  T
Q  100 gaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaa 151  Q
    |||||||||||||||||||||||| || |  |||||||||| ||||||||||    
T  23120782 gaagaaaaagctaacacaattcaaccctcctttgtgtttttctcaccttcaa 23120731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 36470260 - 36470134
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||| | ||||||||| |||||||||||||||||||||| |||| ||||||| |||||  ||||| | ||| |||||| |||||||||||||||    
T  36470260 tctctctctgatttatccgttgctacttagttctggaaatcactttagaagcagaactctatttgtttctggtcagtattttcaacttaggagaaaacga 36470161  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||| ||||||||||||| ||||    
T  36470160 agaaaaagataacacaattcaaccccc 36470134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 19611138 - 19611289
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    ||||||| |||| |||||| || || |||||||||||||||||||||||| ||||||| ||| | ||||||||  |||||| ||  ||||||||||||||    
T  19611138 tctctctgtgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatgtgcttctgatctgtgtttacagtttaggagaaaacga 19611237  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    ||||||| |||||||||||||| ||||  | |||||||||| ||||||||||    
T  19611238 agaaaaaactaacacaattcaaccccccttcttgtgtttttctcaccttcaa 19611289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29681282 - 29681422
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| || || |||| | ||||||||||||||||| ||| ||| ||||| ||| |||| |||||||||| ||||||||||||||    
T  29681282 ttctctctctgttttatccgctgctatttagctatggaaatcacttcagaagcagtactctatttgcttatgatcagtgttttcagcttaggagaaaacg 29681381  T
Q  101 aagaaaaagctaacacaattcaaacc-cctgttgtgttttt 140  Q
    |||||||||||||||| |||||| || ||| ||||||||||    
T  29681382 aagaaaaagctaacactattcaacccacctcttgtgttttt 29681422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 37986378 - 37986500
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||  || || |||||||||||||| |||||||||| |||||| ||||| ||| |||| ||||||||||  |||||||||||||    
T  37986378 ttctctctctgttttatccactgctatttagttctggaaattacttcagaataagaactctatttgcttatgatcagtgttttcagtttaggagaaaacg 37986477  T
Q  101 aagaaaaagctaacacaattcaa 123  Q
    |||||||| ||||||||||||||    
T  37986478 aagaaaaaactaacacaattcaa 37986500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 145
Target Start/End: Complemental strand, 19665707 - 19665567
Alignment:
Q  4 tctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaag 103  Q
    |||||||||| |||||| || || ||||||||||||||||||||||||  |||||| ||||| |||||||| ||| |||||| |||||||||||||||||    
T  19665707 tctctctgttttatccgctgctatttagttctggaaatcacttcagaagaagaactctatttgcttctgatcagt-ttttcagcttaggagaaaacgaag 19665609  T
Q  104 aaaaagctaacacaattcaaacccctgttgtgtttttgtcac 145  Q
    ||||| |||||||||| ||| | ||  |||||||||| ||||    
T  19665608 aaaaatctaacacaatccaacctccccttgtgtttttctcac 19665567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 16631782 - 16631631
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || | ||||||||||||||||| || |||| || |||| ||||| ||| |||| |||||||||| |||||||||||| ||    
T  16631782 tctctctctgttttatccgctgctgcttagttctggaaatcattttagaagcaaaactctatttgcttttgatcagtgttttcagcttaggagaaaagga 16631683  T
Q  102 agaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttca 150  Q
    ||||||| | |||||||||||| ||||   | |||||||||| |||||||||    
T  16631682 agaaaaaaccaacacaattcaaccccctcttcttgtgtttttctcaccttca 16631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 19621782 - 19621882
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||||| |||| ||||||||||||| ||| ||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  19621782 ttagttctgaacatcactttagaagcagaactttatttgcttttgatccgtgttttcatcttaggagaaaacgaagaaaaagctaacacaattcaacccc 19621881  T
Q  128 c 128  Q
    |    
T  19621882 c 19621882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 23749869 - 23749742
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| ||  | ||||| ||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||||||    
T  23749869 ttctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaaacg 23749771  T
Q  101 aagaaaaagctaacacaattcaaacccct 129  Q
    ||||||||||||||||||||||| |||||    
T  23749770 aagaaaaagctaacacaattcaatcccct 23749742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 24628701 - 24628784
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  24628701 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaa 24628784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 44397514 - 44397402
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgttt 138  Q
    |||||||||||| ||||||| ||| | |||||||| |||||||||| |||| ||||||| ||||||||||| |||||||||||| |||| | || |||||    
T  44397514 atcacttcagaagcagaactctatctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaattcaacccccttcttatgttt 44397415  T
Q  139 ttgtcaccttcaa 151  Q
    || ||||||||||    
T  44397414 ttctcaccttcaa 44397402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 29120685 - 29120560
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||| ||||| |||||||||||| |||    
T  29120685 ttagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaattcaacccc 29120586  T
Q  128 c---tgttgtgtttttgtcaccttca 150  Q
    |   | |||||||||| |||||||||    
T  29120585 cccttcttgtgtttttctcaccttca 29120560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 14605737 - 14605824
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaa 151  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||   | |||||||||| ||||||||||    
T  14605737 cttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttcaa 14605824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 14905129 - 14905244
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | |||||||| | |||||||| |||||||||||| ||||||||||| |||||||||||| ||||   ||||||||    
T  14905129 atcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaatccccccttgttgtgt 14905228  T
Q  137 ttttgtcaccttcaat 152  Q
    ||||  ||||||||||    
T  14905229 ttttcccaccttcaat 14905244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 22676364 - 22676477
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgttt 138  Q
    ||||||||| ||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||  |||| | ||||||||    
T  22676364 atcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaccccccttcttgtgttt 22676463  T
Q  139 ttgtcaccttcaat 152  Q
    || |||||||||||    
T  22676464 ttctcaccttcaat 22676477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 129
Target Start/End: Complemental strand, 10072206 - 10072106
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||    |||| || || |||||||| |||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  10072206 tagttctgaacatcacttcagaagtgaaactctagttgcttctgatcagtgttttcatcttaggagaaaaagaagaaaaagctaacacaattcaaccccc 10072107  T
Q  129 t 129  Q
    |    
T  10072106 t 10072106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 55379617 - 55379529
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||||||| | |||||||| |||||||||| |||||||||||| |||| |||| || ||||||||||||||||    
T  55379617 atcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgaaggaaaaactcacacaattcaaacccc 55379529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 3792649 - 3792527
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | ||||| |  |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  3792649 tagttctgaacatcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaaccccc 3792550  T
Q  129 -tgttgtgtttttgtcaccttca 150  Q
     | ||| |||||| |||||||||    
T  3792549 gtcttgcgtttttctcaccttca 3792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 15135009 - 15134915
Alignment:
Q  55 gaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcacct 147  Q
    ||||| ||||| |||||||| |||||||||| |||| ||||||||||||||| | |||||||||||||| ||||  | |||||||||| ||||||    
T  15135009 gaactctatttgcttctgatcagtgttttcaacttaagagaaaacgaagaaataactaacacaattcaaccccccttcttgtgtttttctcacct 15134915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 56033833 - 56033750
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||||    
T  56033833 atcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaa 56033750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 10071820 - 10071726
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | ||||||||||||   ||||| ||||| ||||| || |||||||||| ||||||| |||| |||||||||| |||||||||||||    
T  10071820 tagttctgaacatcacttcagaagtggaactctatttgcttcttatcagtgttttcagcttaggaaaaaaagaagaaaaagataacacaattcaa 10071726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 41115665 - 41115729
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||||||||||||| ||||||||||||||||||  | |||||||||| ||||||||||    
T  41115665 taggagaaaacgaagaaaaagttaacacaattcaaacccccttcttgtgtttttctcaccttcaa 41115729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 54679166 - 54679058
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | ||| |||| |||||||||| |||||||||||| ||||||||||  |||||||||||| ||||  | |||||||    
T  54679166 atcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtt 54679067  T
Q  138 tttgtcacc 146  Q
    ||| |||||    
T  54679066 tttctcacc 54679058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 17246926 - 17246847
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaa 108  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| |||||||||    
T  17246926 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaa 17246847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 3106267 - 3106329
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttca 150  Q
    ||||||||||| |||||||||||||||||||||||| ||| | |||||||||| | |||||||    
T  3106267 ttaggagaaaaagaagaaaaagctaacacaattcaaccccttcttgtgtttttcttaccttca 3106329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 152
Target Start/End: Complemental strand, 40859963 - 40859898
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||| |||||||||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  40859963 taggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaat 40859898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 19883971 - 19883910
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| |||||||| | |||||||||||| ||||||||| |||||||||||||| ||||    
T  19883971 cttctgattagtgtttttagcttaggagaaaaagaagaaaaaactaacacaattcaaccccc 19883910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 3394964 - 3394889
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaaga 104  Q
    |||||||| |||| ||||||||| || || | ||||| |||||||| |||||||| | ||||||||||||||||||    
T  3394964 tagttctgaaaattacttcagaagcataattctatttgcttctgattagtgtttttagcttaggagaaaacgaaga 3394889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 8686296 - 8686343
Alignment:
Q  92 gagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttt 139  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||    
T  8686296 gagaaaacgaagaaaaagcaaacacaattcaaccccctcttgtgtttt 8686343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 11914927 - 11914859
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaatgat 155  Q
    ||||||||||||||||||||| ||||||||||||| ||||  | ||  |||||| ||||||||||||||    
T  11914927 taggagaaaacgaagaaaaagttaacacaattcaatcccccttctttagtttttctcaccttcaatgat 11914859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 15560527 - 15560463
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||||||| |||||||||| |||||||||||| ||||  | |||||||||| |||||||||    
T  15560527 ttaggagaaaacaaagaaaaagcaaacacaattcaaccccccttcttgtgtttttttcaccttca 15560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 6640945 - 6640909
Alignment:
Q  92 gagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||||||||||||| ||||    
T  6640945 gagaaaacgaagaaaaagctaacacaattcaaccccc 6640909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 22089534 - 22089478
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttca 150  Q
    ||||||||||||||| ||||||||||||| |||| | |||||||||| |||||||||    
T  22089534 aaaacgaagaaaaagttaacacaattcaacccccttcttgtgtttttctcaccttca 22089478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 13576941 - 13577035
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtg-ttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||| |||||| |||||||||||| |||  |||||| ||||||||||||    
T  13576941 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgtttttcagcttaggagaaaaagaa-taaaagcaaacacaattcaa 13577035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 17399531 - 17399596
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttca 150  Q
    ||||||||||| ||||||||| |||||||||||||| ||||   | |||||||||| |||||||||    
T  17399531 ttaggagaaaaagaagaaaaacctaacacaattcaacccccccttcttgtgtttttctcaccttca 17399596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 11900411 - 11900324
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    |||||||||||||| ||||| ||| | |||||||  |||| |||||   ||||| |||||||| ||||| |||||||||||||| |||||    
T  11900411 atcacttcagaatctgaactctatctgcttctgaacagtgatttcag--taggaaaaaacgaaaaaaaaactaacacaattcaaccccct 11900324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 82; Significance: 9e-39; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 378315 - 378436
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||||||  ||||||||||||||    
T  378315 tctctctctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaaacga 378414  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  378415 agaaaaagctaacacaattcaa 378436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 219520 - 219459
Alignment:
Q  68 ttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    ||||||| |||||||||| |||||||||||||||| |||||  ||||||||||||| |||||    
T  219520 ttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaagtaacacaattcaaccccct 219459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 210666 - 210601
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||||  |||||||||| |||||||||||| |||| | |||||||||| |||||||||||    
T  210666 ttaggagaaaaacaagaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttcaat 210601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 9e-39; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 49643574 - 49643695
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||| || ||||||| ||||| ||| |||| |||||||||| |||||||||||||||    
T  49643574 tctctctctgttttatccgctgttatttagttctggaaatcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaaacga 49643673  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  49643674 agaaaaagctaacacaattcaa 49643695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 15902516 - 15902393
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||| |||||||||| |||||||||||| |||||||||||||||||||||||| |||    
T  15902516 ttagttctggaaatcacttcagaagcagaactttatttgcctctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccc 15902417  T
Q  128 c-tgttgtgtttttgtcaccttca 150  Q
    | | |||||||||| |||||||||    
T  15902416 cttcttgtgtttttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 17667717 - 17667591
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| ||||||||| || |||||||||||||| ||||||||| ||||||| ||||| ||| |||| |||||||||| |||||||||||| ||    
T  17667717 tctctctctgttttatccgttgctatttagttctggaaattacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaggagaaaatga 17667618  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    ||||||| |||||||||||||| ||||    
T  17667617 agaaaaaactaacacaattcaaccccc 17667591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 152
Target Start/End: Original strand, 19889775 - 19889901
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||| ||||| |||||||||||| ||||||| ||||| ||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||| |||    
T  19889775 ttagtcctggacatcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacaaaattcaacccc 19889874  T
Q  128 c--tgttgtgtttttgtcaccttcaat 152  Q
    |  | |||||||||| |||||||||||    
T  19889875 ccttcttgtgtttttctcaccttcaat 19889901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 13939243 - 13939117
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||| | || || |||||||||||||||| || |||| ||||| | ||||| |||||||| |||||||||| ||||||||||||| |    
T  13939243 tctctctctgttttatctgctgctatttagttctggaaatcaatttagaagcagaaatctatttgcttctgattagtgttttcagcttaggagaaaacaa 13939144  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  13939143 agaaaaagctaacacaattcaaccccc 13939117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 13781398 - 13781522
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||||||||||||||| || || ||||  |||| ||| |||| ||||||| || |||||||||||||||    
T  13781398 tctctctctgttttatccgctgctatttagttctggaaatcacttcataagcaaaact--atttgcttttgatcagtgtttccagcttaggagaaaacga 13781495  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  13781496 agaaaaagctaacacaattcaaccccc 13781522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 14393843 - 14393926
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  14393843 atcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaattcaa 14393926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 29952252 - 29952401
Alignment:
Q  6 tctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaa 105  Q
    |||||||| |||||||||  | ||||| ||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||    
T  29952252 tctctgttttatccgttgc-atttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaa 29952350  T
Q  106 aaagctaacacaattcaa-----acccctgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||||||||||      ||||| |||||||||||||||||||||    
T  29952351 aaagctaacacaattcaacccccccccctcttgtgtttttgtcaccttcaa 29952401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 30001406 - 30001555
Alignment:
Q  6 tctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaa 105  Q
    |||||||| |||||||||  | ||||| ||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||    
T  30001406 tctctgttttatccgttgc-atttagtcctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaa 30001504  T
Q  106 aaagctaacacaattcaa-----acccctgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||||||||||      ||||| |||||||||||||||||||||    
T  30001505 aaagctaacacaattcaacccccccccctcttgtgtttttgtcaccttcaa 30001555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 19885889 - 19886040
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||| ||| | ||||||||||||  |||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  19885889 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacga 19885987  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||| ||||||| ||||| ||||  | |||||||||| |||||||||||    
T  19885988 agaaaaagataacacatttcaacccccctttttgtgtttttctcaccttcaat 19886040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 20645501 - 20645380
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||| | |||||||||||| || || | ||||| ||| |||| |||||||||| ||||| |||||||||    
T  20645501 tctctctctgttttatccgctgctatttagttctgaacatcacttcagaagcaaaattctatttgcttttgatcagtgttttcaacttagaagaaaacga 20645402  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  20645401 agaaaaagctaacacaattcaa 20645380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 14954755 - 14954605
Alignment:
Q  3 ctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaa 102  Q
    ||||||||||| |||||||||  ||| ||||||  | || |||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| |||    
T  14954755 ctctctctgttttatccgttgcaact-agttcttaacattacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaa 14954657  T
Q  103 gaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||| |||||||||||| ||||  | |||||||||| |||||||||||    
T  14954656 gaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttcaat 14954605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 6090037 - 6089923
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa--acccctgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||   ||| | |||||||    
T  6090037 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaattcaacctcccttcttgtgtt 6089938  T
Q  138 tttgtcaccttcaat 152  Q
    ||| |||||||||||    
T  6089937 tttctcaccttcaat 6089923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 8874935 - 8875087
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||  ||  | ||||| ||| | |||||||||||| || |||||||||| |||||||| |||||||||| ||||||| |||||||    
T  8874935 tctctctctgttttatccactgccatttagtcctgaacatcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggaaaaaacga 8875034  T
Q  102 agaaaaagctaacacaattcaaac---ccctgttgtgtttttgtcaccttcaa 151  Q
    ||||||| | |||||||||||| |   || | |||||||||| ||||||||||    
T  8875035 agaaaaaaccaacacaattcaacccctccttcttgtgtttttctcaccttcaa 8875087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 17239740 - 17239865
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||| ||| | ||||||||| || ||||||| ||||| ||| |||| | |||||||| |||||||||||||||    
T  17239740 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacga 17239838  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  17239839 agaaaaagctaacacaattcaaccccc 17239865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 11189302 - 11189189
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa-acccctgttgtgttt 138  Q
    ||||||||| ||  |||||| ||| |||||||||| |||||||||| |||||||||||| ||||||||| | |||||||||||| |||| | ||||||||    
T  11189302 atcacttcataagtagaactctatcttcttctgatcagtgttttcatcttaggagaaaaagaagaaaaaaccaacacaattcaacacccttcttgtgttt 11189203  T
Q  139 ttgtcaccttcaat 152  Q
    || |||||||||||    
T  11189202 ttctcaccttcaat 11189189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 16659371 - 16659499
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    ||||||||||||  ||||| || || ||||||||| | ||||||  |||| ||||| ||||||| |||||||| |||||||||| |||||||||||||||    
T  16659371 tctctctctgtttcatccgctgctatttagttctgaacatcactatagaaacagaattttatttgcttctgatcagtgttttcagcttaggagaaaacga 16659470  T
Q  102 ag--aaaaagctaacacaattcaaacccc 128  Q
    ||  |||||||||||| ||||||| ||||    
T  16659471 agaaaaaaagctaacaaaattcaagcccc 16659499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 20628299 - 20628398
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| | |||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  20628299 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcactgttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaccccc 20628398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 52919745 - 52919622
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||||||| ||  |||||| ||| | ||| |||| |||||||||| |||||||||||||||||||||| |||||||||||||  |||    
T  52919745 ttagttctgaacatcacttcaaaaatagaactctatctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcagcccc 52919646  T
Q  128 c-tgttgtgtttttgtcaccttca 150  Q
    | | |||||||||| |||||||||    
T  52919645 cttcttgtgtttttctcaccttca 52919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 12727084 - 12727197
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac--ccctgttgtgtt 137  Q
    ||||||||||||  |||| | ||| | |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| |  || | |||||||    
T  12727084 atcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagctaacacaattcaaccctccttcttgtgtt 12727183  T
Q  138 tttgtcaccttcaa 151  Q
    ||| ||||||||||    
T  12727184 tttctcaccttcaa 12727197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 13823379 - 13823291
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||| |||||||||| | |||||||| |||||||||  |||||||||||| ||||||||| | |||||||||||| ||||    
T  13823379 atcacttcagaattagaactttatctgcttctgatcagtgttttcggcttaggagaaaaagaagaaaaatccaacacaattcaaccccc 13823291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 40799210 - 40799085
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa----a 124  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||  ||||||||||||    |    
T  40799210 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaacccca 40799111  T
Q  125 cccctgttgtgtttttgtcaccttca 150  Q
    ||| | |||||||||| |||||||||    
T  40799110 cccttcttgtgtttttctcaccttca 40799085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 1241886 - 1242035
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  ||| ||||||| | ||||||||||||  |||| | ||| | |||||||| |||||||||| |||||||||||| ||    
T  1241886 tctctctctgttttatccgctgcaact-agttctgaacatcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaaaaga 1241984  T
Q  102 agaaaaagctaacacaattcaaacc--cctgttgtgtttttgtcaccttca 150  Q
    ||||||| | |||||||||||| ||  | | |||||||||| |||||||||    
T  1241985 agaaaaaaccaacacaattcaaccccacttcttgtgtttttctcaccttca 1242035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 14968678 - 14968595
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  14968678 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaa 14968595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 38178493 - 38178576
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  38178493 atcacttcagaagaagaactctatctgcttctgattagtgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaa 38178576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 41494311 - 41494229
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||||| |||||||| |||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  41494311 atcacttcagaaatagaactctatttacttctgatcagtgttttcagcttaggagaaaa-gaagaaaaagccaacacaattcaa 41494229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 12963934 - 12964046
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac--ccctgttgtgtt 137  Q
    ||||||||  || ||||||| ||||| ||||| || |||||||||| || ||||||||| |||||||||||||||||||||||| |  || | |||||||    
T  12963934 atcacttcgtaagcagaactctatttgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaagctaacacaattcaaccctccttcttgtgtt 12964033  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  12964034 tttctcaccttca 12964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 52283104 - 52282989
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||| ||||||  |||||||||||| ||||   | ||||||    
T  52283104 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaattcaacccccccttcttgtgt 52283005  T
Q  137 ttttgtcaccttcaat 152  Q
    |||| |||||||||||    
T  52283004 ttttctcaccttcaat 52282989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 28581364 - 28581291
Alignment:
Q  80 ttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||||| |||||||||||| |||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  28581364 ttttcagcttaggagaaaaagaagaaaaagctaacacaattcaacccccattcttgtgtttttctcaccttcaa 28581291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 49554358 - 49554470
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| | |||||||| |||||||||||| ||||||||| | |||||||||||| ||||  |  ||||||    
T  49554358 atcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaattcaaccccccttcgtgtgtt 49554457  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  49554458 tttctcaccttca 49554470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 22804869 - 22804944
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaaca 115  Q
    ||||||||| ||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  22804869 atcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaaactaaca 22804944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 2560494 - 2560383
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||| ||  |||||| ||| | ||||| || |||||||||  |||||||||| ||||||||||||  |||||||||||| ||||  | |||||||    
T  2560494 atcacttcaaaagtagaactctatctgcttcttatcagtgttttcggcttaggagaagacgaagaaaaagtaaacacaattcaaccccccttcttgtgtt 2560395  T
Q  138 tttgtcaccttc 149  Q
    ||| ||||||||    
T  2560394 tttctcaccttc 2560383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 18122496 - 18122584
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | || ||||| |||||||||| | |||||||||| | ||||||| |||||||||||||| ||||    
T  18122496 atcacttcagaagtagaactctatctgctcctgatcagtgttttcagcgtaggagaaaaaggagaaaaaactaacacaattcaaccccc 18122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 22465376 - 22465439
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaa-acccctgttgtgtttttgtcaccttca 150  Q
    ||||||||||| ||||||||||||||||||||||||  ||||  |||||||||| |||||||||    
T  22465376 ttaggagaaaaggaagaaaaagctaacacaattcaaccccccccttgtgtttttctcaccttca 22465439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 29854719 - 29854637
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||   |||||| ||| | ||||||||  |||||||||  ||||||||||| ||||||||||||||||||||||||    
T  29854719 atcacttcagatgtagaactctatctgcttctgatc-gtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaa 29854637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 128
Target Start/End: Complemental strand, 31302657 - 31302570
Alignment:
Q  41 tcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||| ||||  |||||| ||| | |||||||| |||||||||| | |||||||||| ||||||||| | |||||||||||| ||||    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaaccccc 31302570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 11222868 - 11222740
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga---agaaaaagctaacacaattcaaac 125  Q
    |||||||| | ||||||| ||||  |||||| ||| | |||||||| |||||||||| |||||||||| | ||   ||||||||| |||||||||||| |    
T  11222868 tagttctgaacatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacc 11222769  T
Q  126 ccc-tgttgtg-tttttgtcaccttcaat 152  Q
    ||| | ||||| ||||| |||||||||||    
T  11222768 cccttcttgtgttttttctcaccttcaat 11222740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 12967574 - 12967510
Alignment:
Q  90 aggagaaaacgaagaaaaagctaacacaattcaa---acccctgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||||||||||||||||||||||||||    ||| | |||||||||| ||||||||||    
T  12967574 aggagaaaacgaagaaaaagctaacacaattcaactcccccttcttgtgtttttctcaccttcaa 12967510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 33582528 - 33582415
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggag-aaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgt 136  Q
    ||||||||||||| |||| | ||| | ||||| || |||||||||| |||| ||| ||||  |||||||||| |||||||||||| ||||  | ||||||    
T  33582528 atcacttcagaattagaaatctatctacttcttatcagtgttttcatcttatgagaaaaaaaaagaaaaagccaacacaattcaaccccccttcttgtgt 33582429  T
Q  137 ttttgtcaccttca 150  Q
    |||| |||||||||    
T  33582428 ttttatcaccttca 33582415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 152
Target Start/End: Original strand, 21639094 - 21639243
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||||||  | ||||| ||| | ||| ||||||||  |||||| ||| | ||||||||  || ||||||  ||||||||||| ||    
T  21639094 tctctctctgttttatccgttgcaa-ttagt-ctgaacatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaaga 21639190  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    ||||||||| |||||||||||| ||||  | |||||||||| ||||| |||||    
T  21639191 agaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccatcaat 21639243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 50299584 - 50299480
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  ||| ||||||| | |||| |||||||  |||| | ||| | |||||||| |||||||||| |||||||||||| ||    
T  50299584 tctctctctgttttatccgctgcaact-agttctgaacatcagttcagaagtagaaatctatctgcttctgatcagtgttttcaacttaggagaaaaaga 50299486  T
Q  102 agaaaa 107  Q
    ||||||    
T  50299485 agaaaa 50299480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 128
Target Start/End: Complemental strand, 11222116 - 11222014
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga---agaaaaagctaacacaattcaaac 125  Q
    |||||||| | ||||||| ||||  |||||| ||| | |||||||| |||||||||| |||||||||| | ||   ||||||||| |||||||||||| |    
T  11222116 tagttctgaacatcactttagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaagaagatgaagaaaaagccaacacaattcaacc 11222017  T
Q  126 ccc 128  Q
    |||    
T  11222016 ccc 11222014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 16199925 - 16199982
Alignment:
Q  69 tctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||| |||||   |||||||||||||||||||||| |||||||||||| ||||    
T  16199925 tctgatgagtgatttcag--taggagaaaacgaagaaaaagccaacacaattcaaccccc 16199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 19250285 - 19250348
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacc--cctgttgtgtttttgtcaccttca 150  Q
    ||||||||||||||| ||||||||||||||||||| ||  | | |||||||||| |||||||||    
T  19250285 taggagaaaacgaagtaaaagctaacacaattcaacccctcttcttgtgtttttctcaccttca 19250348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 25399103 - 25399191
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||  |||||||||||  ||||||||||  |||| ||||||| ||||    
T  25399103 atcacttcagaagtagaactctatctgcttctgattagtgttttcgacttaggagaaacagaagaaaaagtcaacataattcaaccccc 25399191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 23539121 - 23539187
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaa--acccctgttgtgtttttgtcaccttcaat 152  Q
    |||||| |||||||||||||| ||||||||||||||   ||| | |||||||||| |||||||||||    
T  23539121 ttaggaaaaaacgaagaaaaaactaacacaattcaacctcccttcttgtgtttttctcaccttcaat 23539187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 26418618 - 26418657
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  26418618 taggagaaaacgaagaaaaagcaaacacaattcaaccccc 26418657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 40850239 - 40850174
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttca 150  Q
    ||||||||||| ||||||||| |||||||||||||| ||||   | |||||||||| |||||||||    
T  40850239 ttaggagaaaaagaagaaaaaactaacacaattcaaccccccgttcttgtgtttttctcaccttca 40850174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 53057573 - 53057687
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| || ||||||| ||||  ||||||  ||||||||   |||||||||||| ||||  | |||||||    
T  53057573 atcacttcagaagtagaactctatctacttctgattagagttttcagcttataagaaaaaaaagaaaaaatcaacacaattcaaccccctttcttgtgtt 53057672  T
Q  138 tttgtcaccttcaat 152  Q
    ||| |||||||||||    
T  53057673 tttctcaccttcaat 53057687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 46350678 - 46350772
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | |||| |||| ||  |||||| ||| | ||||| || ||| |||||| |||||||||||| ||||||||||  ||||||||||||    
T  46350678 tagttctgcacatcatttcaaaagtagaactctatctgcttctcatcagtattttcaacttaggagaaaaagaagaaaaagtcaacacaattcaa 46350772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 47206972 - 47206914
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaa 98  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||||    
T  47206972 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaa 47206914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 3237955 - 3237891
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||| |||||| | |||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  3237955 ttagaagaaaatgtagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 3237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 16031797 - 16031729
Alignment:
Q  55 gaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||| ||||| |||||||| |||  ||||| |||||||||||| ||||||||||  | ||||||||||    
T  16031797 gaactctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaatcacaattcaa 16031729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 148
Target Start/End: Original strand, 20569506 - 20569652
Alignment:
Q  4 tctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaag 103  Q
    ||||||| || ||||||||| || |||||||||||||||||||||||| || |||| ||||| |||||||| |||||||||| |||||||||||||||||    
T  20569506 tctctctcttttatccgttgctatttagttctggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaag 20569605  T
Q  104 aaaaagctaacacaattcaaacccc--tgttgtgtttttgtcacctt 148  Q
    |||||| ||||||||||||| ||||  | |||||||||| |||||||    
T  20569606 aaaaagttaacacaattcaaccccccttcttgtgtttttctcacctt 20569652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 24575373 - 24575256
Alignment:
Q  6 tctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaa 105  Q
    |||||||| |||||| || || |||||||||||||||||||||||| || |||| ||||| |||||||| |||||||||| |||||||||||| ||||||    
T  24575373 tctctgttttatccgctgctatttagttctggaaatcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaa 24575274  T
Q  106 aaagctaacacaattcaa 123  Q
    ||||||||||||||||||    
T  24575273 aaagctaacacaattcaa 24575256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 25828499 - 25828347
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||||||||||||| |||| || || | ||||| |||||||| |||||||| |||||||||||||||||    
T  25828499 tctctctctgttttatccgctgctatttagttctggaaatcactttagaagcataaatctatttgcttctgatcagtgtttttaccttaggagaaaacga 25828400  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||||||| ||||||| ||||  | |||||||||| |||||| ||||    
T  25828399 agaaaaagctaacataattcaaccccccttcttgtgtttttctcacctccaat 25828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 17964058 - 17964209
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||| | || || ||||||||||||||||| |||||| ||||||| |||||  || |||| |||||||||| |||||||||||||||    
T  17964058 tctctctctgttttatctgctgctatttagttctggaaatcacctcagaagcagaactctatttgtttatgatcagtgttttcagcttaggagaaaacga 17964157  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||||||| ||||||||||||| ||||  | || ||||||| ||||||||||    
T  17964158 agaaaaagttaacacaattcaaccccccttcttttgtttttctcaccttcaa 17964209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 22257508 - 22257381
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    |||||||||||||||||||||||| || |||| ||||| |||||||| |||||||||| ||| |||||||| ||||||||||||||||||||| || |||    
T  22257508 ttagttctggaaatcacttcagaagcataactctatttgcttctgataagtgttttcagctttggagaaaatgaagaaaaagctaacacaattgaacccc 22257409  T
Q  128 c---tgttgtgtttttgtcaccttcaat 152  Q
    |   | |||||||||| |||||||||||    
T  22257408 cccttcttgtgtttttctcaccttcaat 22257381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 40780616 - 40780502
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac--ccctgttgtgtt 137  Q
    |||||||||||| ||||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| |||||||||||||| |  || | |||||||    
T  40780616 atcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaattcaaccctccttcttgtgtt 40780517  T
Q  138 tttgtcaccttcaat 152  Q
    ||| |||||||||||    
T  40780516 tttctcaccttcaat 40780502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 120
Target Start/End: Original strand, 10010505 - 10010623
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || ||||||||| | ||||||| |||| ||||||| ||||| |||||||| |||||||||| |||||||||||||||    
T  10010505 tctctctctgttttatccgctgctatttagttctgaacatcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacga 10010604  T
Q  102 agaaaaagctaacacaatt 120  Q
    | ||||| |||||||||||    
T  10010605 aaaaaaaactaacacaatt 10010623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 38631094 - 38630968
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || |||||||||| |||||||| || |||| ||||| | ||||| |||||||| |||||||||| |||||||||||||||    
T  38631094 tctctctctgttttatccgctgctacttagttccggaaatcattttagaagcagaattgtatttgcttctgatcagtgttttcagcttaggagaaaacga 38630995  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    | |||||| ||||||| ||||| ||||    
T  38630994 aaaaaaagttaacacagttcaatcccc 38630968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 151
Target Start/End: Complemental strand, 24778675 - 24778524
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||| ||| | |||||||||||| || |||| ||||| |||||||| |||||||||| |||||||| ||||||    
T  24778675 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagtaaacga 24778577  T
Q  102 agaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaa 151  Q
    ||||||||| |||||||||||| ||||   | |||||||||| ||||||||||    
T  24778576 agaaaaagccaacacaattcaacccccccttcttgtgtttttctcaccttcaa 24778524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 28702006 - 28702131
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||||| |||||||| |||||||||| |||||||||||| ||||||||||  |||||||||||| ||||    
T  28702006 tagttctgaacatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccc 28702105  T
Q  129 --tgttgtgtttttgtcaccttcaat 152  Q
      | |||||||||| |||||||||||    
T  28702106 cttcttgtgtttttctcaccttcaat 28702131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 24851453 - 24851577
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac-- 125  Q
    ||||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| |      
T  24851453 ttagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccct 24851552  T
Q  126 ccctgttgtgtttttgtcaccttca 150  Q
    || | |||||||||| |||||||||    
T  24851553 ccttcttgtgtttttctcaccttca 24851577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 22455752 - 22455865
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||| ||||   | ||||||    
T  22455752 atcacttcagaagtagaactctatctgcttctgatcagtgttttgagcttaggagaaaacgaagaaaaagctaacacaattcaacccccccttcttgtgt 22455851  T
Q  137 ttttgtcaccttca 150  Q
    |||| |||||||||    
T  22455852 ttttctcaccttca 22455865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 39038395 - 39038516
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | |||||  || | ||||||||||||  | |||| ||| | |||||||| |||||||||| |||||||||||||||    
T  39038395 tctctctctgttttatccgctgcaatttagtcttgaacatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaacga 39038494  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||||||||||||||||    
T  39038495 agaaaaagctaacacaattcaa 39038516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 45087753 - 45087902
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||||||  ||| ||||||| | ||||||||||||  | || | ||| | |||||||| |||||||||| |||||||||||| ||    
T  45087753 tctctctctgttttatccgttgcaact-agttctgaacatcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaaga 45087851  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||  |||||||||||| ||||  | |||||||||| |||||||||    
T  45087852 agaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 45087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 25188709 - 25188627
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattca 122  Q
    ||||||||||||   ||||| ||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  25188709 atcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattca 25188627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 13964765 - 13964859
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | | ||||||||||  |||||||||| | |||||||| |||||||||| |||||||||||| ||||||||| | ||||||||||||    
T  13964765 tagttctgaacaccacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaacaaacacaattcaa 13964859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 22188889 - 22189013
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| | |||||||||| ||||||||| | |||||||||||| ||||    
T  22188889 tagttctgaacatcacttcagaagtagaactatatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaattcaatcccc 22188988  T
Q  129 ---tgttgtgtttttgtcaccttca 150  Q
       | |||||||||| |||||||||    
T  22188989 cgttcttgtgtttttctcaccttca 22189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 27294770 - 27294684
Alignment:
Q  68 ttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaa 151  Q
    ||||||| |||||||| | |||||||||||||||||||||| |||||||||||||| ||||   | |||||||||| ||||||||||    
T  27294770 ttctgatcagtgtttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccccccttcttgtgtttttctcaccttcaa 27294684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 21537980 - 21538063
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||||| ||| | ||||| || | |||||||| |||| ||||||||||||||||||| ||||||||||||    
T  21537980 atcacttcagaagtagaactctatctgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagcaaacacaattcaa 21538063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 23185172 - 23185235
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaat 152  Q
    |||||||||| |||||||||||||||||||||||| ||||  |||||||||| | |||||||||    
T  23185172 taggagaaaaagaagaaaaagctaacacaattcaacccccccttgtgtttttcttaccttcaat 23185235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 23596435 - 23596498
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaat 152  Q
    |||||||||| |||||||||||||||||||||||| ||||  |||||||||| | |||||||||    
T  23596435 taggagaaaaagaagaaaaagctaacacaattcaacccccccttgtgtttttcttaccttcaat 23596498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 22782473 - 22782538
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||| |||||||||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  22782473 taggagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttatcaccttcaat 22782538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 6391973 - 6391861
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||| || | || ||||||||| | |||||||||||| ||||  | |||||||    
T  6391973 atcacttcagaagtagaactctatatgcttctgatcagtgttttcagcttaagaaagaaagaagaaaaaaccaacacaattcaaccccccttcttgtgtt 6391874  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  6391873 tttctcaccttca 6391861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 20152790 - 20152859
Alignment:
Q  43 acttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagcta 112  Q
    |||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| |||||||||||||    
T  20152790 acttcagaagtagaactctatctgcttctgattagtgttttcaacttaggagaaaaagaagaaaaagcta 20152859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 6574957 - 6575059
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttt 139  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||||||         |||||||||||||||||| ||||  |||||||||    
T  6574957 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaa---------aaagctaacacaattcaacccccccttgtgtttt 6575047  T
Q  140 tgtcaccttcaa 151  Q
    | ||||||||||    
T  6575048 tttcaccttcaa 6575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 31801667 - 31801766
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||| | || ||||||| ||| | |||||||| |||||||||| ||||||| | || ||||||||| | |||||||||||| ||||    
T  31801667 tagttctgaacatcactttaaaagcagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaaaccaacacaattcaaccccc 31801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 128
Target Start/End: Original strand, 18377042 - 18377104
Alignment:
Q  66 tcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||| || ||| ||| || |||||||||||||||||||||| |||||||||||||| ||||    
T  18377042 tcttcttattagtatttccagcttaggagaaaacgaagaaaaaactaacacaattcaaccccc 18377104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 24376384 - 24376312
Alignment:
Q  81 tttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttca 150  Q
    ||||| ||||||||||||||||||||||  ||||||||||||| ||||   | |||||||||| |||||||||    
T  24376384 tttcagcttaggagaaaacgaagaaaaacttaacacaattcaacccccccttcttgtgtttttctcaccttca 24376312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 41122465 - 41122583
Alignment:
Q  32 ttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaac--ccct 129  Q
    ||||| |||||||||||||| | ||||| ||| | |||||||| ||||  ||||   |||||||||||||||||||||  |||||||||||| |  || |    
T  41122465 ttctgaaaatcacttcagaagctgaactctatctgcttctgatcagtgacttcag--taggagaaaacgaagaaaaagtaaacacaattcaaccctcctt 41122562  T
Q  130 gttgtgtttttgtcaccttca 150  Q
     |||||||||| |||||||||    
T  41122563 cttgtgtttttctcaccttca 41122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 22786497 - 22786563
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaa----cccctgttgtgtttttgtcaccttcaa 151  Q
    ||||| |||| |||||||||||||||||||||||||    ||||| |||||||||| ||||||||||    
T  22786497 taggataaaaagaagaaaaagctaacacaattcaaacccccccctcttgtgtttttctcaccttcaa 22786563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 150
Target Start/End: Original strand, 28551765 - 28551825
Alignment:
Q  92 gagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||| |||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  28551765 gagaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 28551825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 19539706 - 19539647
Alignment:
Q  93 agaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||| |||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  19539706 agaaaatgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 19539647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 44839692 - 44839640
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgttttt 140  Q
    ||||||||||| ||||||||| | |||||||||||| ||||| ||||||||||    
T  44839692 ttaggagaaaaagaagaaaaatcaaacacaattcaaccccctcttgtgttttt 44839640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 28712488 - 28712582
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | ||||||||||||  | |||| ||| | |||||||| | |||||||| ||||||||||||  |||||||||  |||| |||||||    
T  28712488 tagttctgaacatcacttcagaagtataactctatctgcttctgatcaatgttttcagcttaggagaaaaataagaaaaagaaaacataattcaa 28712582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 15671443 - 15671492
Alignment:
Q  103 gaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaat 152  Q
    ||||||||||||| ||||||| ||||  |||||||||| |||||||||||    
T  15671443 gaaaaagctaacataattcaacccccccttgtgtttttctcaccttcaat 15671492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 128
Target Start/End: Complemental strand, 25917966 - 25917933
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||| |||||||||||||||||||||||||||||    
T  25917966 aaaaagaagaaaaagctaacacaattcaaacccc 25917933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 31328815 - 31328879
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||||||||| ||||||||| | |||||||||||| ||||  | |||||||||| ||||||||||    
T  31328815 taggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttcaa 31328879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 31335536 - 31335600
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||||||||| ||||||||| | |||||||||||| ||||  | |||||||||| ||||||||||    
T  31335536 taggagaaaaagaagaaaaaacaaacacaattcaaccccccttcttgtgtttttctcaccttcaa 31335600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 16494604 - 16494541
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||||| ||||||||||||||| |||||||| ||||  | |||||||||| ||| |||||    
T  16494604 taggagaaaaagaagaaaaagctaacccaattcaaccccccttcttgtgtttttctcaacttca 16494541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 117
Target Start/End: Complemental strand, 23234271 - 23234183
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacaca 117  Q
    |||||||| | ||||||||||||  | |||| ||| | |||||||| |||||||||| | |||||||||| ||| ||||| | ||||||    
T  23234271 tagttctgaacatcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcataggagaaaaagaaaaaaaaaccaacaca 23234183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 5e-37; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 12758553 - 12758679
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || |||||||||||||||||||||| |||| || |||| ||||| |||||||| ||||||||||  ||||||||||||||    
T  12758553 tctctctctgttttatccgctgctacttagttctggaaatcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaaacga 12758652  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  12758653 agaaaaagctaacacaattcaaccccc 12758679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 17007643 - 17007498
Alignment:
Q  9 ctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaa 108  Q
    ||||| |||||| || || |||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  17007643 ctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa 17007544  T
Q  109 gctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
     | |||||||||||| ||||  | |||||||||| |||||||||||    
T  17007543 acaaacacaattcaaccccccttcttgtgtttttctcaccttcaat 17007498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 17541307 - 17541452
Alignment:
Q  9 ctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaa 108  Q
    ||||| |||||| || || |||||||||||||||||||||||| ||||||| ||||| |||||||| |||||||||| |||||||||||| |||||||||    
T  17541307 ctgttttatccgctgctatttagttctggaaatcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaa 17541406  T
Q  109 gctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
     |||||||||||||| ||||  | |||||||||| |||||||||||    
T  17541407 actaacacaattcaaccccccttcttgtgtttttctcaccttcaat 17541452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 19153364 - 19153238
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||||||||||||||||||||| || |||| ||||| |||||||| |||||||||| |||||||||||||||    
T  19153364 tctctctctgttttatccgctgctatttagttctggaaatcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacga 19153265  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||| ||||||||||||||||| ||||    
T  19153264 agaataagctaacacaattcaaccccc 19153238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 16682064 - 16682175
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||| | || || |||||||||||||||||||||||| | ||||| ||||| |||||||| | |||||||| |||||||||||||||    
T  16682064 tctctctctgttttatctgctgctatttagttctggaaatcacttcagaagccgaactatatttgcttctgatcattgttttcagcttaggagaaaacga 16682163  T
Q  102 agaaaaagctaa 113  Q
    ||||||||||||    
T  16682164 agaaaaagctaa 16682175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 25163373 - 25163261
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    |||||||||||| ||||||| | ||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||  | || ||||    
T  25163373 atcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccccttcttatgtt 25163274  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  25163273 tttctcaccttca 25163261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 20383199 - 20383282
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||| || |||||||||| |||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||    
T  20383199 atcacttcagaagcataactttatttgcttctgattagtgttttcaacttaggagaaaacgaagaaaaagccatcacaattcaa 20383282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 30422279 - 30422391
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacc--cctgttgtgtt 137  Q
    ||||||||||||  |||||| ||||| |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||  | | |||||||    
T  30422279 atcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagcaaacacaattcaacccctcttcttgtgtt 30422378  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  30422379 tttctcaccttca 30422391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 17796756 - 17796631
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  ||| ||||||| | ||||||||||||  | |||| ||| | |||||||| |||||||||| |||||||||||| ||    
T  17796756 tctctctctgttttatccgctgcaact-agttctgaacatcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaaaga 17796658  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    ||||||||| |||||||||||| ||||    
T  17796657 agaaaaagccaacacaattcaaccccc 17796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 39692855 - 39692734
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| |||||| ||||||| ||||||| |||||  || |||| | |||||||| ||||||||||||||||||||||  ||||||||||| ||||     
T  39692855 ttagttctgaaaatcatttcagaagcagaactctatttgtttatgatcaatgttttcagcttaggagaaaacgaagaaaaaattaacacaattc-aacct 39692757  T
Q  128 ctgttgtgtttttgtcaccttca 150  Q
     | |||||||||| |||||||||    
T  39692756 tttttgtgtttttctcaccttca 39692734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 150
Target Start/End: Original strand, 45539324 - 45539445
Alignment:
Q  31 gttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc-- 128  Q
    |||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||  |||||||||||| ||||      
T  45539324 gttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaacccccct 45539423  T
Q  129 tgttgtgtttttgtcaccttca 150  Q
    | |||||||||| |||||||||    
T  45539424 tcttgtgtttttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 20256323 - 20256406
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttca 85  Q
    |||||||||||| |||||| || || |||||| ||||||||||||||||| ||||||| ||||| |||||||| ||||||||||    
T  20256323 tctctctctgttttatccgctgctatttagttttggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 148
Target Start/End: Original strand, 23185584 - 23185703
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||| ||||||||  |||||| ||| | |||||||| |||||||||| ||||| |||||| ||||||||| | |||||||||||| ||||    
T  23185584 tagttctgaacatcgcttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaattcaaccccc 23185683  T
Q  129 tgttgtgtttttgtcacctt 148  Q
      |||||||||| |||||||    
T  23185684 ctttgtgtttttctcacctt 23185703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 23264476 - 23264564
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||| | ||| | |||||||| |||||||||| |||||||||||| ||||||||||| |||||||||||| ||||    
T  23264476 atcacttcagaagtagaattctatctacttctgatcagtgttttcagcttaggagaaaaggaagaaaaagccaacacaattcaaccccc 23264564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 31445404 - 31445291
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||||| ||||  || ||||| | |||||||||||| ||||  | |||||||    
T  31445404 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaaaaaaaaaaaaaaaaaccaacacaattcaacccccattcttgtgtt 31445305  T
Q  138 tttgtcaccttcaa 151  Q
    ||||||||||||||    
T  31445304 tttgtcaccttcaa 31445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 18121981 - 18122069
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| | |||||||| || ||||||||| ||||||||||| |||||||||||| ||||    
T  18121981 atcacttcagaagtagaactctatctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaattcaaccccc 18122069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 16206533 - 16206458
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaaca 115  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||| ||||||||||| ||||    
T  16206533 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaaca 16206458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 9319885 - 9319761
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| ||||| |||||| ||| |||||   |||||||||||| ||||    
T  9319885 tagttctgaacatcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaataaaaaatcaacacaattcaaccccc 9319786  T
Q  129 ---tgttgtgtttttgtcaccttca 150  Q
       | |||||||||| |||||||||    
T  9319785 ccttcttgtgtttttctcaccttca 9319761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 15336925 - 15337018
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | |||||||||||| ||||||| ||| | || ||||| |||| |||||  ||||||||||| ||||||||||| ||||||||||||    
T  15336925 tagttctgaacatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaa 15337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 15425990 - 15426083
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | |||||||||||| ||||||| ||| | || ||||| |||| |||||  ||||||||||| ||||||||||| ||||||||||||    
T  15425990 tagttctgaacatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaa 15426083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 15517294 - 15517387
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| | |||||||||||| ||||||| ||| | || ||||| |||| |||||  ||||||||||| ||||||||||| ||||||||||||    
T  15517294 tagttctgaacatcacttcagaagcagaactctatctgctcctgatcagtgatttcag-ttaggagaaaaagaagaaaaagcaaacacaattcaa 15517387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 85
Target Start/End: Original strand, 20256421 - 20256491
Alignment:
Q  15 tatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttca 85  Q
    |||||| || || |||||| ||||||||||||||||| ||||||| ||||| |||||||| ||||||||||    
T  20256421 tatccgctgctatttagttttggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttca 20256491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 29692626 - 29692564
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcacctta 90  Q
    |||||| ||||||||||||||||| ||||||| ||||| |||||||| |||||||||| ||||    
T  29692626 ttagttatggaaatcacttcagaagcagaactctatttgcttctgatcagtgttttcagctta 29692564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 18771948 - 18771883
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaatga 154  Q
    |||||||| | |||||||||||||||||||||||| |||||  ||||||||| ||||||| |||||    
T  18771948 taggagaagatgaagaaaaagctaacacaattcaacccccttctgtgtttttctcaccttaaatga 18771883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 16188544 - 16188460
Alignment:
Q  68 ttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaat 152  Q
    ||||||| |||| ||||| ||||||| |||| ||| ||||| |||||||||||||| ||||  | |||||||| |||||||||||    
T  16188544 ttctgatcagtgctttcagcttaggaaaaaaagaataaaaaactaacacaattcaaccccccctggtgtttttctcaccttcaat 16188460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 19942537 - 19942450
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | ||| ||||  ||||||||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  19942537 atcacttcagaagtagaactctatctgctt-tgatcggtgttttcagcttaggagaaaacgaagaaaaagccaacataattcaaccccc 19942450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 36104658 - 36104559
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||||| ||| ||||||||  ||||||  || | ||||||||  |||||||||  ||||||||||| ||||||||||| |||||||||||| |||    
T  36104658 ttagttctggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaacccc 36104560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 18676923 - 18676845
Alignment:
Q  76 agtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    ||||||| || ||||||||||   |||||||||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  18676923 agtgtttccagcttaggagaatttgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaat 18676845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 19706766 - 19706727
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  19706766 taggagaaaacgaagaaaaagctaacacaattcaaccccc 19706727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 19957235 - 19957300
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa---acccctgttgtgtttttgtcaccttcaa 151  Q
    |||||||||||||||||||||||||||||||||||    ||| | |||||||||| ||||||||||    
T  19957235 taggagaaaacgaagaaaaagctaacacaattcaatctccccttcttgtgtttttctcaccttcaa 19957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 120
Target Start/End: Complemental strand, 17914376 - 17914338
Alignment:
Q  82 ttcaccttaggagaaaacgaagaaaaagctaacacaatt 120  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  17914376 ttcagcttaggagaaaacgaagaaaaagctaacacaatt 17914338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 21932151 - 21932097
Alignment:
Q  67 cttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaatt 120  Q
    |||||||| |||||||| || |||||||||||| |||||||||||||||||||||    
T  21932151 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaatt 21932097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 22673031 - 22672966
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttcaat 152  Q
    |||||||||||  |||||||||| |||||||||||| |||| | |||||||||| |||||||||||    
T  22673031 ttaggagaaaaacaagaaaaagccaacacaattcaacccccttcttgtgtttttctcaccttcaat 22672966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 13431520 - 13431579
Alignment:
Q  93 agaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||| |||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  13431520 agaaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 13431579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 14990984 - 14991050
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||| ||||||||||| |||||||||||| ||||   | |||||||||| ||||||||||    
T  14990984 ttaggagaaaaagaagaaaaagccaacacaattcaaccccccgatcttgtgtttttctcaccttcaa 14991050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 1210604 - 1210662
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||| |||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  1210604 aaaaagaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaa 1210662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 40846308 - 40846369
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaatga 154  Q
    |||| |||||||||||||||||||||||| ||||  | |||| ||||| |||||||||||||    
T  40846308 aaaaagaagaaaaagctaacacaattcaaccccccttcttgtatttttctcaccttcaatga 40846369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 17442685 - 17442754
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaa 98  Q
    |||||||| | ||||||||||||  |||||| ||||| |||||||| |||||||||| |  |||||||||    
T  17442685 tagttctgaacatcacttcagaagtagaactctatttgcttctgatcagtgttttcagcacaggagaaaa 17442754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 43773359 - 43773307
Alignment:
Q  101 aagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    ||||||||||||||||||||||| ||||  | |||||||||| ||||||||||    
T  43773359 aagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaa 43773307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 17287067 - 17287126
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||| ||||||||||| |||||||||||| ||||  | |||||||||| |||||||||||    
T  17287067 aaaaagaagaaaaagccaacacaattcaaccccccttcttgtgtttttctcaccttcaat 17287126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6513221 - 6513343
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||||| ||||||| ||||| ||| |||| |||||||||| |||| |||||||||    
T  6513221 ttctctctctgttttatccgctgctacttagttctggaaatcacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaagagaaaacg 6513320  T
Q  101 aagaaaaagctaacacaattcaa 123  Q
    |||||||||| ||||||||||||    
T  6513321 aagaaaaagccaacacaattcaa 6513343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6498660 - 6498509
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| ||  ||||||| ||| | ||||||||||||  |||||| ||| | ||||| || |||||||||| ||||||||||||||    
T  6498660 ttctctctctgttttatccgctgcaacttagtcctgaacatcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaaacg 6498561  T
Q  101 aagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaat 152  Q
    ||||||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  6498560 aagaaaaagctaacacaattcaaccccctcttgtgttttactcaccttcaat 6498509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 123
Target Start/End: Complemental strand, 17814308 - 17814187
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||| ||||||||||||||||| ||||| ||||||| |||  ||| | |||||||| ||||| |||||||||    
T  17814308 tctctctctgttttatccgctgctatttagttatggaaatcacttcagaagcagaattttatttgctttcgatcaatgttttcagcttagaagaaaacga 17814209  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||| ||||||||||||||    
T  17814208 agaaaaaactaacacaattcaa 17814187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 31487515 - 31487401
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    ||||||||| ||| |||||| ||||| |||||||| |||||||||| |||||||||||||||||||||| | |||||||||||| ||||  | |||||||    
T  31487515 atcacttcaaaattagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaccaacacaattcaaccccccttcttgtgtt 31487416  T
Q  138 tttgtcaccttcaat 152  Q
    ||| |||||||||||    
T  31487415 tttctcaccttcaat 31487401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 22000857 - 22000969
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtt 137  Q
    |||| ||||||| || |||| ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||  | |||||||    
T  22000857 atcatttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaactcaaccccccttcttgtgtt 22000956  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  22000957 tttctcaccttca 22000969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 23413806 - 23413889
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||| || ||||||| ||||| |||||| | |||||||||| |||||||||||||||||||||||||||||||||||||    
T  23413806 atcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaa 23413889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 90263 - 90376
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattcaaac-ccctgttgtgtt 137  Q
    |||||||| ||| ||||||| ||||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| | |  | |||||||    
T  90263 atcacttcggaagcagaactctatttgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaagctaacacaattcaacctcattcttgtgtt 90362  T
Q  138 tttgtcaccttcaa 151  Q
    ||| ||||||||||    
T  90363 tttctcaccttcaa 90376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 7746526 - 7746614
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| |||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  7746526 atcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaattcaaccccc 7746614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 21075976 - 21076096
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||||||| | ||||||||||||  ||||||  || | |||||||| |||||| ||| |||||||||||||||    
T  21075976 tctctctctgttttatccgctgc-atttagttctgaacatcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaaacga 21076074  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    |||||||||||||| |||||||    
T  21076075 agaaaaagctaacataattcaa 21076096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 150
Target Start/End: Original strand, 19546323 - 19546469
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||| ||| | |||||||||||| || |||| ||||| |||||||| ||||| |||| |||||||| ||||||    
T  19546323 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcagaagcataactatatttgcttctgatcagtgtcttcagcttaggaggaaacga 19546421  T
Q  102 agaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttca 150  Q
    ||||||| | |||||||||| ||||||   ||||||||| |||||||||    
T  19546422 agaaaaaaccaacacaattc-aaccccccctgtgtttttctcaccttca 19546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 12353693 - 12353801
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttt 139  Q
    ||||||||| ||  |||||||||| | |||||||| || ||||||| ||||||||||| ||||||||||| ||||||||||||| ||||   ||||||||    
T  12353693 atcacttcataagtagaactttatctgcttctgatcagagttttcagcttaggagaaatcgaagaaaaagttaacacaattcaaccccc--ctgtgtttt 12353790  T
Q  140 tgtcaccttca 150  Q
    | |||||||||    
T  12353791 tttcaccttca 12353801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 21100607 - 21100694
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    |||||||| |||||||||| |||||||||||| ||||||||| |||||||||||||| ||||  | ||||| |||| |||||||||||    
T  21100607 cttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaaccccccttcttgtgcttttctcaccttcaat 21100694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 9399443 - 9399526
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  |||| | ||| | |||||||| |||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  9399443 atcacttcagaaatagaattctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaaactaacacaattcaa 9399526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 21199890 - 21199955
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaat 152  Q
    ||||||||||||||||||||||||||||||||||| ||||  | |||||||||| |||||||||||    
T  21199890 taggagaaaacgaagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttcaat 21199955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 150
Target Start/End: Complemental strand, 30742257 - 30742135
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||||| ||| | |||||||| |||||||||| |||   |||||| ||||||||||  |||||||||||| ||||    
T  30742257 tagttctgaacatcacttcagaagtagaactatatctgcttctgatcagtgttttcagctttaaagaaaaagaagaaaaagtcaacacaattcaaccccc 30742158  T
Q  129 -tgttgtgtttttgtcaccttca 150  Q
     | |||||||||| |||||||||    
T  30742157 ttcttgtgtttttctcaccttca 30742135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 33932611 - 33932486
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  ||| ||||||| | |||| |||||||  |||| | ||||| |||||||| |||||||||| ||||| ||||||  |    
T  33932611 tctctctctgttttatccgctgcaact-agttctgaacatcatttcagaagtagaaatctatttgcttctgatcagtgttttcagcttagaagaaaaaaa 33932513  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    ||||||||| |||||||||||| ||||    
T  33932512 agaaaaagccaacacaattcaaccccc 33932486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 123
Target Start/End: Original strand, 13546319 - 13546440
Alignment:
Q  3 ctctctctgttct-atccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    ||||||||||| | ||||| ||| | |||||| || | ||||||||||||  |||||| ||| | |||||||| | |||||||| ||||| |||||||||    
T  13546319 ctctctctgtttttatccgctgtaagttagttatgaacatcacttcagaagtagaactctatctgcttctgatcattgttttcagcttagaagaaaacga 13546418  T
Q  102 agaaaaagctaacacaattcaa 123  Q
    ||||||||  ||||||||||||    
T  13546419 agaaaaagtaaacacaattcaa 13546440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 37395485 - 37395361
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||| | ||| | ||||| || |||||||||| |||||||||| | ||||||||||  |||||||||||| ||||    
T  37395485 tagttctgaacatcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaagaagaagaaaaagtaaacacaattcaaccccc 37395386  T
Q  129 --tgttgtgtttttgtcaccttcaa 151  Q
      | |||||||||| ||||||||||    
T  37395385 cttcttgtgtttttctcaccttcaa 37395361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 11993207 - 11993108
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | |||||||||||| ||||||| ||| | || ||||| |||||||| |  ||||||||||| ||||||||||| |||||||||||| |||    
T  11993207 ttagttctgaacatcacttcagaagcagaactctatctgctcctgatcagtgtttttag-ttaggagaaaaagaagaaaaagcaaacacaattcaacccc 11993109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 13736964 - 13737019
Alignment:
Q  68 ttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||| ||||||||||  ||||||||||| ||||||||||||||||||||||||    
T  13736964 ttctgatcagtgttttcagtttaggagaaaaagaagaaaaagctaacacaattcaa 13737019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 31117182 - 31117094
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| |  || |||| |||||||||| |||||||||||||||||||||||  ||||| |||||| ||||    
T  31117182 atcacttcagaagtagaactctatctggttttgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacactattcaaccccc 31117094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 128
Target Start/End: Original strand, 21207686 - 21207724
Alignment:
Q  90 aggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  21207686 aggagaaaacgaagaagaagctaacacaattcaaacccc 21207724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 26120704 - 26120761
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc-tgttgtgtttttgtcaccttcaa 151  Q
    |||| |||||||||||||||||||||||| |||| | |||||||||| ||||||||||    
T  26120704 aaaaagaagaaaaagctaacacaattcaacccccttcttgtgtttttctcaccttcaa 26120761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 15516286 - 15516187
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||| ||||||||  |||||| ||| | ||||||||  |||| ||||  ||||||||||| ||||||||||| |||||||||||| |||    
T  15516286 ttagttctgaatatctcttcagaagtagaactctatctgcttctgatatgtgtcttcag-ttaggagaaaaagaagaaaaagccaacacaattcaacccc 15516188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 31146482 - 31146522
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  31146482 taggagaaaaagaagaaaaagctaacacaattcaaccccct 31146522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 108
Target Start/End: Complemental strand, 33021977 - 33021898
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaa 108  Q
    |||||||| | |||||||| |||  |||||| ||| | |||||||| |||||||||| |||||||||||| | |||||||    
T  33021977 tagttctgaacatcacttcggaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaaggagaaaaa 33021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 25097920 - 25097981
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa--acccctgttgtgtttttgtcacctt 148  Q
    |||||||||||||||||||||| |||| |||||||  |||| | |||||||||| |||||||    
T  25097920 taggagaaaacgaagaaaaagcaaacataattcaaccacccttcttgtgtttttctcacctt 25097981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 25157012 - 25157073
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa--acccctgttgtgtttttgtcacctt 148  Q
    |||||||||||||||||||||| |||| |||||||  |||| | |||||||||| |||||||    
T  25157012 taggagaaaacgaagaaaaagcaaacataattcaaccacccttcttgtgtttttctcacctt 25157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Original strand, 31589879 - 31589936
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||| |||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  31589879 aaaaagaagaaaaagctaacacaattcaaccccccttattgtgtttttctcaccttca 31589936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 35932885 - 35932919
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||| ||||||||||||||||||||||||    
T  35932885 taggagaaaaagaagaaaaagctaacacaattcaa 35932919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 3246339 - 3246403
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||||| ||||||||||  |||||||||||| ||||  | |||||||||| |||||||||    
T  3246339 ttaggagaaaaagaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttca 3246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 124
Target Start/End: Complemental strand, 10848031 - 10847995
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaa 124  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10848031 ttaggagaaaaagaagaaaaacctaacacaattcaaa 10847995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 31937 - 31786
Alignment:
Q  1 ttctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacg 100  Q
    ||||||||||||| |||||| |  || |||||||||||||||| || |||| ||||||||||||| |||||||| |||||||  | ||||||||||||||    
T  31937 ttctctctctgttttatccgcttctatttagttctggaaatcaatttagaagcagaactttatttgcttctgatcagtgtttcaagcttaggagaaaacg 31838  T
Q  101 aagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  31837 aagaaaaagctaacacaattcaaccccccttcttgtgtttttctcaccttca 31786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 152
Target Start/End: Complemental strand, 48637 - 48510
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||||||||||||||| || || |||| ||||  |||||||| ||||||| || |||||||||||| |||||||||||||||||||||||| |||    
T  48637 ttagttctggaaatcacttcaaaagcaaaactctattcgcttctgatcagtgtttccagcttaggagaaaatgaagaaaaagctaacacaattcaacccc 48538  T
Q  128 c---tgttgtgtttttgtcaccttcaat 152  Q
    |   | |||||||||| || ||||||||    
T  48537 cccttcttgtgtttttctctccttcaat 48510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 9207 - 9097
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttt 139  Q
    |||||||||||| ||| | | ||||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||  |||||||||    
T  9207 atcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcttacacaattc-aaccccccttgtgtttt 9109  T
Q  140 tgtcaccttcaa 151  Q
    | ||||||||||    
T  9108 tctcaccttcaa 9097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 150
Target Start/End: Complemental strand, 7226 - 7076
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    ||||||||| || |||||| || || ||||||||||||||||||| |||| || |||| ||||| |||||||| |||||||||| ||||||||||||  |    
T  7226 tctctctctattttatccgctgctatttagttctggaaatcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaata 7127  T
Q  102 agaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    |||||||| ||||| | ||||| ||||  | |||||||||| |||||||||    
T  7126 agaaaaagttaacagagttcaaccccccttcttgtgtttttctcaccttca 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 28194 - 28315
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||| || |||||||||| | ||| || |||||||| | |||||||||||||||    
T  28194 tctctctctgttttatccgctgctacttagttctggaaatcacttcagaagcaaaactttatttgc-tctaataagtgtttttagcttaggagaaaacga 28292  T
Q  102 agaaaaagctaacacaattcaaa 124  Q
     |||||||  |||||| ||||||    
T  28293 ggaaaaagtaaacacatttcaaa 28315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 129
Target Start/End: Original strand, 20255 - 20356
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | |||||||||||| ||||||| ||||| |||||||| ||| |||| | |||||||||||||||||||||| |||||||||||||| |||    
T  20255 ttagttctgaatatcacttcagaagcagaactctatttacttctgatcagtttttttagcttaggagaaaacgaagaaaaaactaacacaattcaacccc 20354  T
Q  128 ct 129  Q
    ||    
T  20355 ct 20356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 110441 - 110481
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||||||||||| | |||||||||||| ||||    
T  110441 ttaggagaaaacgaagaaaaaaccaacacaattcaaccccc 110481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 930 - 816
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||| | ||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||   | ||||||    
T  930 atcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaaccccccttcttgtgt 831  T
Q  137 ttttgtcaccttcaa 151  Q
    |||| ||||||||||    
T  830 ttttctcaccttcaa 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 14460 - 14335
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| ||  | ||||| ||| | ||||||||| || ||||||| ||||| ||| |||| | |||||||| |||||||||||||||    
T  14460 tctctctctgttttatccgctgc-atttagtcctgaacatcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacga 14362  T
Q  102 agaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| ||||    
T  14361 agaaaaagctaacacaattcaaccccc 14335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 129
Target Start/End: Complemental strand, 9275 - 9186
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    ||||||||||||  |||| | ||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9275 atcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaaccccct 9186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 25737 - 25649
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||||| |||||||| |||||||||| |||||||||||||||||||||||  |||||||||||| ||||    
T  25737 atcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaattcaaccccc 25649  T

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Target: scaffold0337 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 14314 - 14203
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||||||||||||||||||||| | ||||| ||||| |||||||| ||| |||| | ||||||||| |||||    
T  14314 tctctctctgttttatccgctgctatttagttctggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacga 14215  T
Q  102 agaaaaagctaa 113  Q
    | ||||| ||||    
T  14214 ataaaaaactaa 14203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 1356 - 1245
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacga 101  Q
    |||||||||||| |||||| || || |||||||||||||||||||||||| | ||||| ||||| |||||||| ||| |||| | ||||||||| |||||    
T  1356 tctctctctgttttatccgctgctatttagttctggaaatcacttcagaagccgaactctatttgcttctgatcagtatttttagcttaggagagaacga 1257  T
Q  102 agaaaaagctaa 113  Q
    | ||||| ||||    
T  1256 ataaaaaactaa 1245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 7976 - 7895
Alignment:
Q  42 cacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||   ||||| ||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaa 7895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 211641 - 211554
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaa 151  Q
    |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||| ||||   | |||||||||| ||||||||||    
T  211641 cttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttcaa 211554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 152
Target Start/End: Original strand, 19445 - 19571
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||| ||||||  |||||| ||| | |||||||| |||||||||| | || ||||||||||||||||||| |||||||||||| ||||    
T  19445 tagttctgaacatcacgtcagaagtagaactctatctgcttctgattagtgttttcagcataagagaaaacgaagaaaaagccaacacaattcaaccccc 19544  T
Q  129 ---tgttgtgtttttgtcaccttcaat 152  Q
       | |||||||||| |||||||||||    
T  19545 ccttcttgtgtttttctcaccttcaat 19571  T

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Target: scaffold0116 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 152
Target Start/End: Original strand, 21751 - 21851
Alignment:
Q  54 agaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaa 151  Q
    |||||||||||| ||| |||| |||||||||| ||||  |||||||||||||||||  |||||||||||| ||||  | |||||||||| ||||||||||    
T  21751 agaactttatttgcttatgatcagtgttttcaacttaaaagaaaacgaagaaaaagaaaacacaattcaaccccccttcttgtgtttttctcaccttcaa 21850  T
Q  152 t 152  Q
    |    
T  21851 t 21851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 102864 - 102752
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa-acccc--tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | ||| |||| |||||||||| ||||||||||||||||||||||| ||| ||||||||| |||||  | ||||||    
T  102864 atcacttcagaagtagaactctatctgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagttaatacaattcaacacccccttcttgtgt 102765  T
Q  137 ttttgtcaccttc 149  Q
    |||| ||||||||    
T  102764 ttttctcaccttc 102752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 150
Target Start/End: Original strand, 743 - 866
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| | ||||||||||||  |||| |  || | |||||||| |||||||||| |||||||||||  |||||||||| ||||||||||||| ||||    
T  743 tagttctgaacatcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaagttaacacaattcaaccccc 842  T
Q  129 --tgttgtgtttttgtcaccttca 150  Q
      | |||||||||| |||||||||    
T  843 cttcttgtgtttttctcaccttca 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 17677 - 17557
Alignment:
Q  2 tctctctctgttctatccgttgttacttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaa--ac 99  Q
    |||||||||||| |||||| ||  ||| ||||||| | ||||||||||||  |||| | ||||| |||||||| |||||||||| |||||||||||  |     
T  17677 tctctctctgttttatccgctggaact-agttctgaacatcacttcagaagtagaaatctatttgcttctgatcagtgttttcagcttaggagaaaagaa 17579  T
Q  100 gaagaaaaagctaacacaattc 121  Q
    ||||||||||| ||||||||||    
T  17578 gaagaaaaagccaacacaattc 17557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 2278 - 2166
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacc--cctgttgtgtt 137  Q
    ||||||||||||  |||||| ||| | |||||||| ||||| |||| |||||||||||| ||||||||||  |||||||||||| ||  | | |||||||    
T  2278 atcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccccacttcttgtgtt 2179  T
Q  138 tttgtcaccttca 150  Q
    ||| |||||||||    
T  2178 tttctcaccttca 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 2774 - 2651
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||||| ||| ||||||||  ||||||  || | ||||||||  |||||||||  ||||||||||| ||||||||||| |||||||||||| |||    
T  2774 ttagttctggacatctcttcagaagtagaactcaatctgcttctgatctgtgttttcag-ttaggagaaaatgaagaaaaagccaacacaattcaacccc 2676  T
Q  128 c--tgttgtgtttttgtcaccttca 150  Q
    |  | |||||||||| |||||||||    
T  2675 ccttcttgtgtttttctcaccttca 2651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 7511 - 7598
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||  |||||| ||| | |||||||| ||||||||||  ||||||||||| ||||||||||| |||||||||||| ||||    
T  7511 atcacttcagaagtagaactctatctgcttctgatcagtgttttcag-ttaggagaaaaagaagaaaaagccaacacaattcaaccccc 7598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 10909 - 10989
Alignment:
Q  40 atcacttcagaatcagaactttattttctt-ctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaat 119  Q
    ||||||||||||  |||||| ||| | ||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  10909 atcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaat 10989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 15573 - 15653
Alignment:
Q  40 atcacttcagaatcagaactttattttctt-ctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaat 119  Q
    ||||||||||||  |||||| ||| | ||| ||||| ||| |||||| |||||||||||||||||||||||||||||||||    
T  15573 atcacttcagaagtagaactctatctgctttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaat 15653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 13254 - 13191
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||||||||||||||||||||||||||||| ||||  | |||||||||| |||||||||    
T  13254 taggagaaaacgaagaaaaagctaacacaattcaacccccctttttgtgtttttctcaccttca 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 83643 - 83584
Alignment:
Q  67 cttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattcaaac 125  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  83643 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaaac 83584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 83579 - 83522
Alignment:
Q  67 cttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||| |||||||| || |||||||||||| ||||||||||||||||||||||||    
T  83579 cttctgatcagtgtttttcagcttaggagaaaaagaagaaaaagctaacacaattcaa 83522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 581 - 510
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaatgatat 157  Q
    |||||||||||||||||||||| |||||||||||| ||||   | |||||||||| ||||||||||| ||||    
T  581 taggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttcaatcatat 510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 830 - 901
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaatgatat 157  Q
    |||||||||||||||||||||| |||||||||||| ||||   | |||||||||| ||||||||||| ||||    
T  830 taggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttcaatcatat 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 6526 - 6641
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgt 136  Q
    ||||||||||||  |||||| ||| | ||| |||| |||||||||  |||||||||||| ||||||||||  |||||||||||| ||||   | ||||||    
T  6526 atcacttcagaagtagaactctatctgcttttgataagtgttttcggcttaggagaaaaagaagaaaaagaaaacacaattcaacccccccttcttgtgt 6625  T
Q  137 ttttgtcaccttcaat 152  Q
    |||  |||||||||||    
T  6626 tttcctcaccttcaat 6641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 16268 - 16207
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| |||  ||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  16268 cttctgatcagtaatttcagcttaggagaaaacgaagaaatagctaacacaattcaaccccc 16207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 26499 - 26566
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc---tgttgtgtttttgtcaccttcaat 152  Q
    ||||||||||| |||||||||||||||||||||||| ||||   | |||||||||| |||||||||||    
T  26499 ttaggagaaaaagaagaaaaagctaacacaattcaacccccccttcttgtgtttttctcaccttcaat 26566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Original strand, 35593 - 35627
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattca 122  Q
    ||||||||||| |||||||||||||||||||||||    
T  35593 ttaggagaaaaagaagaaaaagctaacacaattca 35627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 111402 - 111490
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||| ||  |||||| ||| | |||||||| |||||||||| ||||||| | || ||||||||||| |||||||||||| ||||    
T  111402 atcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggaaagaaagaagaaaaagccaacacaattcaaccccc 111490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 8 - 91
Alignment:
Q  40 atcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    ||||||||||||  ||||||  || | |||||||| |||||||| |  ||||||||||||||||||||||  ||||||||||||    
T  8 atcacttcagaagtagaactcgatctgcttctgatcagtgtttttagattaggagaaaacgaagaaaaagtaaacacaattcaa 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 2919 - 2958
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2919 taggagaaaacgaagaaaaagctaacacaattcaaccccc 2958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 123
Target Start/End: Original strand, 1058 - 1092
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaa 123  Q
    |||||||||||||||||||||||||||||||||||    
T  1058 taggagaaaacgaagaaaaagctaacacaattcaa 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 5481 - 5372
Alignment:
Q  40 atcacttcagaatcagaactttattttctt-ctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgt 136  Q
    |||||||||||| | ||||| ||| ||||| ||||| |||| |||||   || |||| ||||||||||||||||||||||||||| ||||  | ||||||    
T  5481 atcacttcagaagctgaactctatcttctttctgatcagtgatttcag--tatgagataacgaagaaaaagctaacacaattcaaccccccttcttgtgt 5384  T
Q  137 ttttgtcacctt 148  Q
    |||| |||||||    
T  5383 ttttctcacctt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 500 - 561
Alignment:
Q  67 cttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||| |||||||||| |||||||||||| ||||||||| | ||| |||||||| ||||    
T  500 cttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaactcaattcaaccccc 561  T

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Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 7150 - 7053
Alignment:
Q  29 tagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattcaaac 125  Q
    ||||||| || ||||||||||||   ||||  ||| | |||||||| |||||||| || |||  ||||||| ||||||||||||||||||||||||||    
T  7150 tagttctcgacatcacttcagaagtggaacactatctgcttctgatcagtgtttttcagcttccgagaaaaagaagaaaaagctaacacaattcaaac 7053  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 150
Target Start/End: Original strand, 24566 - 24689
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||||||||||||  ||| || ||| | |||||||| ||||||||||  ||||||||||| ||||||| ||| |||| ||||||| |||    
T  24566 ttagttctgaacatcacttcagaagtagagctctatctgcttctgattagtgttttca-gttaggagaaaaagaagaaagagcaaacataattcaacccc 24664  T
Q  128 c--tgttgtgtttttgtcaccttca 150  Q
    |  | || ||||||| |||||||||    
T  24665 cattcttatgtttttctcaccttca 24689  T

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Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 80623 - 80583
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccct 129  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  80623 taggagaaaacgaagaaaaagctaacacaatttaaccccct 80583  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 151
Target Start/End: Complemental strand, 50553 - 50479
Alignment:
Q  80 ttttcaccttaggagaaaacgaagaaaaagctaacacaattcaa---acccctgttgtgtttttgtcaccttcaa 151  Q
    |||||| |||||||||||||||||||||| |||||| |||||||    ||| | |||||||||| ||||||||||    
T  50553 ttttcagcttaggagaaaacgaagaaaaaactaacataattcaactcccccttcttgtgtttttctcaccttcaa 50479  T

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Target: scaffold1657 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 153
Target Start/End: Complemental strand, 1077 - 1011
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttcaatg 153  Q
    |||||||||||||||||||| | |||||||||||| ||||  | |||||||||  ||||||||||||    
T  1077 taggagaaaacgaagaaaaatcaaacacaattcaaccccccttcttgtgttttgctcaccttcaatg 1011  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Original strand, 2635 - 2674
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  2635 taggagaaaacgaagaaaaagcaaacacaattcaaccccc 2674  T

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Target: scaffold0064 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 120
Target Start/End: Original strand, 44714 - 44745
Alignment:
Q  89 taggagaaaacgaagaaaaagctaacacaatt 120  Q
    ||||||||||||||||||||||||||||||||    
T  44714 taggagaaaacgaagaaaaagctaacacaatt 44745  T

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Target: scaffold0758 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 3568 - 3511
Alignment:
Q  95 aaaacgaagaaaaagctaacacaattcaaacccctgttgtgtttttgtcaccttcaat 152  Q
    |||| ||||||||| | |||||||||||| ||||| |||||||||| || ||||||||    
T  3568 aaaaagaagaaaaaaccaacacaattcaaccccctcttgtgtttttctcgccttcaat 3511  T

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Target: scaffold0488 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0488
Description:

Target: scaffold0488; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 11460 - 11396
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc--tgttgtgtttttgtcaccttca 150  Q
    ||||||||||| ||||||||| |||||||||||||| ||||  | |||||||||| ||| |||||    
T  11460 ttaggagaaaaagaagaaaaaactaacacaattcaaccccccttcttgtgtttttctcaacttca 11396  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 128
Target Start/End: Complemental strand, 18357 - 18256
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgtttt-caccttaggagaaaacgaagaaaaagctaacacaattcaaacc 126  Q
    ||||||||| | ||||||||||||   |||| |||| | ||  |||| |||||||| || |||||||||||| ||||||||||  |||||||||||| ||    
T  18357 ttagttctgaacatcacttcagaagtggaacattatctgctcttgatcagtgtttttcagcttaggagaaaaagaagaaaaagaaaacacaattcaaccc 18258  T
Q  127 cc 128  Q
    ||    
T  18257 cc 18256  T

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Target: scaffold0607 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 5394 - 5354
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    |||||| |||| ||||||||||| |||||||||||||||||    
T  5394 ttaggataaaaagaagaaaaagccaacacaattcaaacccc 5354  T

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Target: scaffold0280 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 3473 - 3572
Alignment:
Q  28 ttagttctggaaatcacttcagaatcagaactttattttcttctgatgagtgttttcaccttaggagaaaacgaagaaaaagctaacacaattcaaaccc 127  Q
    ||||||||| | ||| ||||||||  |||||| ||| | ||||||||  || ||||||  ||||||||||| ||||||||||  |||||||||||| |||    
T  3473 ttagttctgaacatctcttcagaagtagaactctatctgcttctgatctgtattttcag-ttaggagaaaaagaagaaaaagaaaacacaattcaacccc 3571  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 66254 - 66294
Alignment:
Q  88 ttaggagaaaacgaagaaaaagctaacacaattcaaacccc 128  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  66254 ttaggagaaaaagaagaaaaagccaacacaattcaaccccc 66294  T

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