View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1617_low_3 (Length: 427)
Name: NF1617_low_3
Description: NF1617
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1617_low_3 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 286; Significance: 1e-160; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 20 - 412
Target Start/End: Complemental strand, 4574796 - 4574403
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| || ||| |||| |||||||||| |
|
|
| T |
4574796 |
ttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcag |
4574697 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| ||||| |||| |||||||| |||||| ||||||| ||||||| |||| | || ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4574696 |
atagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactga |
4574597 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574596 |
aagcatatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
4574497 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccattg |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4574496 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaagccattg |
4574403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 20 - 412
Target Start/End: Original strand, 4613362 - 4613755
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||| ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613362 |
ttggcgaatagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
4613461 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613462 |
atagaggcctaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
4613561 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttt-tcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||| | |||| |
|
|
| T |
4613562 |
aagcatatgtgctggagtgccaatgttgtgttggccatttttcgcggatcagccagcaaactgcagatatatatgcaatgaatgggaaattgggatggaa |
4613661 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccattg |
412 |
Q |
| |
|
|| || || ||||| ||||| || ||||| ||||| |||||||||||||||||| ||||| ||||||||||| |||||||||||||| |||| |
|
|
| T |
4613662 |
attgacaccaatgtgaagagagatgaggtagagaagctggtcaatgaattgatggtgggagagaaaggaaagaaaatgaggcaaaaggcaattg |
4613755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 20 - 412
Target Start/End: Complemental strand, 4564199 - 4563806
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
4564199 |
ttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcag |
4564100 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||| |||| |||| |||||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4564099 |
atagaggcttaattgcaagttggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactga |
4564000 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||| | ||||||||| ||||||| ||| ||||| |||||||||||||||||| | |||| |
|
|
| T |
4563999 |
aagcatatgtgctggagttccaatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
4563900 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccattg |
412 |
Q |
| |
|
|||||||| ||||||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
4563899 |
atcgatacgaatgtaaagagagaagaggtggagaaacttgtcaatgaattgatgtcaggagagaaaggaaagaagatgcggcaaaaggcaattg |
4563806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 20 - 407
Target Start/End: Complemental strand, 4592719 - 4592331
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| || ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4592719 |
ttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcag |
4592620 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4592619 |
atagaggcgtaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactga |
4592520 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||| |||||||||||| |||||||||| ||||||||||| ||| | ||||||||| ||||||| ||| ||||| |||||||||||||||||| | |||| |
|
|
| T |
4592519 |
aagtatatgtgctggaattccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaatgaatgggagattgggatggaa |
4592420 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggc |
407 |
Q |
| |
|
|| ||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| ||||||| |
|
|
| T |
4592419 |
attgatacgaatgtaaagagagaggaggtggagaaacttatcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaaggc |
4592331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 4560993 - 4560603
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||| || ||||| ||||| || ||| |||| |||||||||| |
|
|
| T |
4560993 |
ttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgatttt-tgaaagaaatttcag |
4560895 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| ||||| |||| |||||||| |||||| ||||||| |||||||| ||| | || ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4560894 |
atagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaactcaaccactga |
4560795 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
4560794 |
aagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaatggaagattggaaacgaa |
4560695 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4560694 |
attgatacaaatgtaaagagggaggacgtggagaaactggtcaatgaattgatgtcctgagataaaggaaagaagatgaggcaaaaggccat |
4560603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 20 - 405
Target Start/End: Complemental strand, 4598659 - 4598273
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4598659 |
ttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcag |
4598560 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||| || | |||| |||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
4598559 |
atagaggcttagttgcaagctggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaactcaaccactga |
4598460 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttt-tcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||| |||||||| ||||| |||||||| ||||| || ||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4598459 |
aagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactgcagatatatttgcaatgaatgggagattggaatcaaa |
4598360 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaag |
405 |
Q |
| |
|
|| || |||||||| ||||| |||||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
4598359 |
attgaaactaatgtgaagagagaggaggtggagaagctggtcaacgaattgatgtcgggagataaaggaaagaaaatgaggcaaaag |
4598273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 30 - 410
Target Start/End: Complemental strand, 4626429 - 4626048
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| ||||| |||||| || ||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
4626429 |
gcaagaaaccctttttgtggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcct |
4626330 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
|||||||| ||||||||| |||||| ||||| | ||||| ||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4626329 |
aatcgcaagctggtgtccgcaagagaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgc |
4626230 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggcc-attttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
||||||||||||||| | |||||||| | |||| | ||||||||| |||| || ||||||||||||||||||||||||||||||| |||||||||| ||| |
|
|
| T |
4626229 |
gctggagttccaatgctgtgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaatgaatgggagattggaatggaaatcgatgcta |
4626130 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||| |||||||||| ||| ||||||||| |||||| ||||||| | |||||||| |||||||||||||||||||||||||| |
|
|
| T |
4626129 |
atgtgaagagggagggggtagagaaactgatcaatgcattgatggcaggagataacggaaagaagatgaggcaaaaggccat |
4626048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 4602277 - 4601886
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
4602277 |
ttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcag |
4602178 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||||||||| |||| |||||||| |||||| |||| || ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4602177 |
atagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactga |
4602078 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||||||||||||||| || ||||| |||||||| |||||| | ||||||||| ||||||| |||| |||||| ||||||||||||||||| | |||| |
|
|
| T |
4602077 |
aagcatatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggagattggtatggaa |
4601978 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||||||| ||||| ||||| |||||| ||| ||| ||| |||||||| |||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4601977 |
atcgatacaaatgtgaagagagaggagttggcgaagctgatcaatgaagtgatagccggagataaaggcaagaagatgaggcaaaaggccat |
4601886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 30 - 405
Target Start/End: Complemental strand, 4557603 - 4557227
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
||||| |||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
4557603 |
gcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcct |
4557504 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
|||||| |||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4557503 |
aatcgcgggctggtgcccgcaagagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatct |
4557404 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||||| | |||||| || || | |
|
|
| T |
4557403 |
gctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactgcagatatatttgcaatacatgggagattggcatggaaattgacacca |
4557304 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaag |
405 |
Q |
| |
|
|||| ||||| || ||||| ||||| ||||||||||||||||| || || ||||||||||||||| || ||||| |
|
|
| T |
4557303 |
atgtgaagagagatgaggtagagaatttggtcaatgaattgatggagggggagaaaggaaagaagatgtggaaaaag |
4557227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 30 - 406
Target Start/End: Complemental strand, 4461601 - 4461224
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4461601 |
gcaagaaaccctttttatggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcct |
4461502 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
||| |||| ||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4461501 |
aatagcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgt |
4461402 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
|||||||| || ||||| ||||||||||| ||| | ||||||||||||||||| |||| ||||||||| |||||||||||||| |||||||||| |
|
|
| T |
4461401 |
gctggagtgccgatgttgtgttggccattctttggtgatcagccagcaaactgtagatttatttgcaacaaatgggagattggacttgaaatcgataaag |
4461302 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaagg |
406 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||| ||||||||| ||||| | |||||||||||||||||||||| |
|
|
| T |
4461301 |
atgtgaagagggatgaggtggagaagttggtcaacgaattgatggttggagagattggaaagaagatgaggcaaaagg |
4461224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 412
Target Start/End: Complemental strand, 4579910 - 4579527
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
||||| |||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4579910 |
gcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
4579811 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
||| | | ||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||| | |
|
|
| T |
4579810 |
aataacgagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatct |
4579711 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggccattttt-tcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||| |||| || |||||||||| | |||||| |||| | ||||||| |||||||| |||| |
|
|
| T |
4579710 |
gctggagttccaatgttgtgttggccatttttcgctgatcacccagtaagctgcagatatttatgcaatacatggaaaattggaattgaaatcgacacta |
4579611 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccattg |
412 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||| |||||||||||| ||||| |||| ||||||||||||||||||||| |||| |
|
|
| T |
4579610 |
atgtgaagagagaggaggtggagaagctggttaatgaattgatggtgggagagaaagcaaagaagatgaggcaaaaggcaattg |
4579527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 30 - 410
Target Start/End: Complemental strand, 4622620 - 4622239
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||| |||||||| || |||||||||| ||||||| |||||||||||||| ||||||||| |
|
|
| T |
4622620 |
gcaagaaaccctttttgtggatcattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcct |
4622521 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
||||||| |||||||| |||||| ||||| | ||||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
4622520 |
aatcgcaggttggtgtccacaagaggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgt |
4622421 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggccattttt-tcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
||||||||| ||||| | |||||||||||||| | ||||||||| ||||||| |||||||| |||||| |||||||||||||| |||||| |||||| |
|
|
| T |
4622420 |
gctggagtttcaatgctgtgttggccatttttcgctgatcagccaacaaactgtagatatatctgcaattcatgggagattggaatcgaaatcaatacta |
4622321 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||| || || ||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4622320 |
atgtgaaaagagaggaggtgtcgaatctgatcaatgaattgatgtcgggagataaaggaaagaagatgagacaaaaggccat |
4622239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 405
Target Start/End: Complemental strand, 4470291 - 4469905
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||| ||| ||||| |||| |||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||| |||| |||| |||||||| |
|
|
| T |
4470291 |
ttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcag |
4470192 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| | |||||||||||||| || ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4470191 |
atagaggcctaatcgtgaactggtgtcctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactga |
4470092 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||||||||| ||| | ||||||| |||||| || |||| ||||||||||||||||||||||||| ||| |
|
|
| T |
4470091 |
aagcatatgcgctggagtgccaatgttgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatgggagattggacttgaa |
4469992 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaag |
405 |
Q |
| |
|
||||||| |||| ||||| || ||||||||||| || ||||||||||||||| ||||| || ||||||||||||||| ||||| |
|
|
| T |
4469991 |
atcgataaagatgtgaagagagatgaggtggagaagctagtcaatgaattgatggttggagagaatggaaagaagatgagggaaaag |
4469905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 41 - 404
Target Start/End: Complemental strand, 4571439 - 4571075
Alignment:
| Q |
41 |
tttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaact |
140 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
4571439 |
tttttgtggatcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggtt |
4571340 |
T |
|
| Q |
141 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagttcc |
240 |
Q |
| |
|
|||| | |||||| ||||||| ||||| ||||||||||| || ||||||||||| ||||||||||||||||| || |||||||||| | |||||||||| |
|
|
| T |
4571339 |
ggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttcc |
4571240 |
T |
|
| Q |
241 |
aatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagg |
339 |
Q |
| |
|
|||||| |||| |||||||||| | ||||||||||||||||| |||||||| |||||| |||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4571239 |
aatgttgtgttagccattttttgctgatcagccagcaaactgtagatatatctgcaatacatgggagattggaatcgaaatcgatactaatgtgaagaga |
4571140 |
T |
|
| Q |
340 |
gaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaa |
404 |
Q |
| |
|
| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
4571139 |
aatgaggtggagaatttggtcaatgaattgatggtgggagataaaggaaagaagatgaggaaaaa |
4571075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 20 - 407
Target Start/End: Complemental strand, 4586124 - 4585736
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| ||||| ||| ||||| ||||||||||| ||||||||||||||||| || || | ||||||||||| |||||| |||||||||||||| |
|
|
| T |
4586124 |
ttggccaatagcaagcaacattttttatggatcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcag |
4586025 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4586024 |
atagaggcctaatcgcgggttggtgcccgcaagagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactga |
4585925 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatt-ttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||| || | ||||||||| ||||||| ||| |||||||||||||||||||||||| | |||| |
|
|
| T |
4585924 |
aagcatatgtgctggagtgccaatgttgtgttggccattcattgctgatcagccaacaaactgtagaattatttgcaatgaatgggagattgggatggaa |
4585825 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggc |
407 |
Q |
| |
|
| || || ||||| ||||| |||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||| |
|
|
| T |
4585824 |
gttgacaccaatgtgaagagagaggaggtggagaagttggtcaatgaattgatggtgggagagaatggaaagaagatgaggcaaaaggc |
4585736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 406
Target Start/End: Original strand, 4514765 - 4515152
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| |||||||| | ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||| ||| |
|
|
| T |
4514765 |
ttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcag |
4514864 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||||||||| |||| |||||||| |||||| |||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4514865 |
atagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactga |
4514964 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||||| |||||||| |||||| | ||||||| ||| ||| | ||||| ||| ||||||| |||| |||||||||||||||||||||||| | ||| |
|
|
| T |
4514965 |
gagcatatgcgctggagtgccaatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgcaatgaatgggagattgggatcgaa |
4515064 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaagg |
406 |
Q |
| |
|
||||||| ||||| ||||| |||||||| || || || ||||||||||||||| ||||| |||||||| || |||||| |||||| |
|
|
| T |
4515065 |
atcgatatgaatgtgaagagagaggaggttgaaaagcttgtcaatgaattgatggtgggagagaaaggaaataaaatgaggaaaaagg |
4515152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 4516809 - 4516418
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||| |||||||||| || ||||||||||||| ||| | |
|
|
| T |
4516809 |
ttggccaacagcaagaaaccttttttgtggattattaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcgg |
4516710 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||| |||| |||| ||||||||| |||||| |||| || ||||| |||||| |||| ||||||||||||||||||||||||||||| || | || |
|
|
| T |
4516709 |
atagaggcgtaatagcaagctggtgtccgcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatgga |
4516610 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||| ||||| ||||| |||||||| |||||||| |||||| | || |||||| |||| ||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4516609 |
aagcatctgtgccggagtaccaatgttgtgttggcctttttttgctgagcagccaacaaattgcagatatatttgcaatgaatgggagattggagcagaa |
4516510 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|| ||||| ||||| ||||| |||||||||||||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4516509 |
attgataccaatgtgaagagagaggaggtggagaagctgatcaatgaattaatggtgggagataaaggaaagaagatgaggcaaaaggccat |
4516418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 4617510 - 4617119
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||| |||||| ||||||||| ||| |
|
|
| T |
4617510 |
ttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcag |
4617411 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||||||||| |||| |||||||| ||||| |||| || |||||||||||||| || ||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4617410 |
atagaggcctaatagcaagttggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactga |
4617311 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||| ||||| |||||||| |||||||| ||||||||||||||| | || |||||| || |||| |||| |||||| ||||||||||||||||| | |||| |
|
|
| T |
4617310 |
aagtatatgcgctggagtgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggagattggtatggaa |
4617211 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||||||| ||||| ||||| |||||| ||| || ||| |||||||| |||| ||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
4617210 |
atcgatacgaatgtgaagagagaggagttggcaaagctgatcaatgaagtgatagccggagataaaggaaagaaaatgaagcaaaaggccat |
4617119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 30 - 410
Target Start/End: Complemental strand, 3172219 - 3171838
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3172219 |
gcaagaaaccctttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcct |
3172120 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
||| |||| |||||||| |||||| |||| || ||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |
|
|
| T |
3172119 |
aatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgt |
3172020 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
|||||| | |||||||| ||| ||||||||||| | ||||| ||| | ||| | ||| ||||||| | |||||| ||||||| | |||||| ||||| | |
|
|
| T |
3172019 |
gctggaatgccaatgttgtgtaggccattttttgctgatcaaccacctaacagtagaattatttgccaagaatggaagattgggatggaaattgatacca |
3171920 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||||||||| | |||||| ||||||||| |||| ||||||||| ||||| |||||||||||||||||||||| |||||| |
|
|
| T |
3171919 |
atgtaaagagaggggaggtagagaaactgatcaacgaattgatggtgggagagaaaggaaagaagatgaggcaaagggccat |
3171838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 19 - 406
Target Start/End: Original strand, 4259797 - 4260185
Alignment:
| Q |
19 |
attggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttca |
118 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||||||||||||| || | ||||| ||||| || |||||||||| ||||||| || ||||||||| |
|
|
| T |
4259797 |
attggccaatagcaagaaaccctttttgtggatcattaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcg |
4259896 |
T |
|
| Q |
119 |
gatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactg |
218 |
Q |
| |
|
||||||||||||||||| | ||||||||| |||||||||||| | |||||| ||||| |||| |||||||| |||||||| |||||||||||||||| || |
|
|
| T |
4259897 |
gatagaggcctaatcgcgagctggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactcaaccattg |
4259996 |
T |
|
| Q |
219 |
aaagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaagga |
317 |
Q |
| |
|
||||||| ||||| | |||||||||||| ||||||||||||||| | ||||||||| ||||||| |||| |||||| || |||||||||||||||| || |
|
|
| T |
4259997 |
aaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaacgaatgggagattggaattga |
4260096 |
T |
|
| Q |
318 |
aatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaagg |
406 |
Q |
| |
|
||| |||||||||| || || || ||||||| ||| ||| |||||||| | ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4260097 |
aattaatactaatgtgaaaagagatgaggtggcgaagctgatcaatgaaattatgtcaggagaagaaggaaagaagatgaggcaaaagg |
4260185 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 20 - 406
Target Start/End: Complemental strand, 4506345 - 4505958
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||| |||||||||| ||||||||||||| |
|
|
| T |
4506345 |
ttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcag |
4506246 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||| |||| || |||| ||||||| | |||||| |||| ||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4506245 |
atagaagccttatagcaagctggtgttcacaagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactga |
4506146 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||| |||||||| |||||| | |||||||| || ||| | ||||| ||| ||||||| |||| |||||||||||||| ||||||||||| ||| |
|
|
| T |
4506145 |
aagcatatgcgctggagtgccaatgctgtgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaattggagattggaatcgaa |
4506046 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaagg |
406 |
Q |
| |
|
|| ||||||||||| || || || | || ||||| |||||| ||||| | ||| ||||| |||||||| ||||||||| |||||| |
|
|
| T |
4506045 |
attgatactaatgtgaatagagaaaatgtagagaagctggtcgatgaaattatggttggagagaaaggaaacaagatgaggaaaaagg |
4505958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 20 - 404
Target Start/End: Original strand, 4266810 - 4267195
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||| ||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| | || |||||||||| |
|
|
| T |
4266810 |
ttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcag |
4266909 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| ||||| |||| |||||||| ||||| |||| || ||||||||||| ||||| ||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
4266910 |
atagaggactaatagcaagttggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactga |
4267009 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||| ||| | ||||||||| ||||||| |||| ||||||| ||||||||||||||||| ||| |
|
|
| T |
4267010 |
aagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaatgggagattggactcgaa |
4267109 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaa |
404 |
Q |
| |
|
||| |||| ||||| ||||| || || || ||||| | ||||||||||||||| ||||| |||||||| | ||||| |||||| |
|
|
| T |
4267110 |
atcaatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaaaggaaatatgatgaagcaaaa |
4267195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 20 - 407
Target Start/End: Original strand, 4489999 - 4490387
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||| || |||||||| || ||| |||| |||||||||| |
|
|
| T |
4489999 |
ttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcag |
4490098 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| ||||| |||| |||||||| |||||| | ||||| || |||||||||||||| ||||||||||||||||||||||||||||||| || || |
|
|
| T |
4490099 |
atagaggactaatagcaagttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaatcatgga |
4490198 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|| |||||||||||||| |||||||| ||||||||||||||| | ||||| ||| | | | ||| ||||||| | |||||||||||||| | | || |
|
|
| T |
4490199 |
gagtatatgtgctggagtgccaatgttgtgttggccattttttgctgatcaaccacttagcagtagaattatttgcgaagaatgggagattgggatgaaa |
4490298 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggc |
407 |
Q |
| |
|
|| ||||| ||||||||||| || ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
4490299 |
attgataccaatgtaaagagagaagaggtagagaaactgatcaatgaattgatggtgggagagaaaggaaagaagatgaggcaaaaggc |
4490387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 30 - 408
Target Start/End: Complemental strand, 4568534 - 4568155
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcct |
129 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||||||||||| || ||| |||||||||| |
|
|
| T |
4568534 |
gcaagaaaccttttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggcca |
4568435 |
T |
|
| Q |
130 |
aatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgt |
229 |
Q |
| |
|
||| |||| ||||||||| ||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||| || |||||||| ||| |
|
|
| T |
4568434 |
aatagcaagctggtgtccgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgt |
4568335 |
T |
|
| Q |
230 |
gctggagttccaatgttatgttggcc-attttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatacta |
328 |
Q |
| |
|
|| |||| ||||||||||||||||| ||||||| || |||||| || |||||||||||||||| ||| | | |||||| |||| ||||| ||||| | |
|
|
| T |
4568334 |
gccagagtaccaatgttatgttggccttttttttctgagcagccaacatactgcagatatatttgtaataagttggagatcggaatcgaaattgatacaa |
4568235 |
T |
|
| Q |
329 |
atgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggcc |
408 |
Q |
| |
|
|||| ||||| |||||||||||||| ||| | |||||||| ||| ||| | |||||||| |||||||||||||||||| |
|
|
| T |
4568234 |
atgtgaagagagaggaggtggagaagctgatgaatgaattaatggtgggacagaaaggaaaaaagatgaggcaaaaggcc |
4568155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 41 - 410
Target Start/End: Complemental strand, 4481160 - 4480790
Alignment:
| Q |
41 |
tttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaact |
140 |
Q |
| |
|
||||||||||| |||||| || ||||||||||||| |||||||| || |||||||| |||| | |||| ||||||||| ||||||||||||| |||| | |
|
|
| T |
4481160 |
tttttgtggattattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagtt |
4481061 |
T |
|
| Q |
141 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagttcc |
240 |
Q |
| |
|
||||||| |||||| |||| || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| || |
|
|
| T |
4481060 |
ggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgcc |
4480961 |
T |
|
| Q |
241 |
aatgttatgttggccatt-ttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagg |
339 |
Q |
| |
|
|||||| ||||||||||| ||| | ||||||||| | ||| | ||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
4480960 |
aatgttgtgttggccattctttgccgatcagccacctaaccgtagaattatttgcaatgaatgggagattggactcgaaatcgataccaatgtgaagaga |
4480861 |
T |
|
| Q |
340 |
gaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|| || ||||||| | ||||||||||| || ||||| |||||||||||||||| |||||||||||| |
|
|
| T |
4480860 |
gaagatgtggagaggttaatcaatgaattgttggtgggagagaaaggaaagaagatgaagcaaaaggccat |
4480790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 19 - 406
Target Start/End: Original strand, 4256267 - 4256643
Alignment:
| Q |
19 |
attggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttca |
118 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||||||||| || |||||||| ||||| || |||||||||| |||||| | |
|
|
| T |
4256267 |
attggccaatagcaagaaaccatttttgtgtatcattaggcctgacctcgtcattggtggctcctttattttgtcatctgagttt-------------cg |
4256353 |
T |
|
| Q |
119 |
gatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactg |
218 |
Q |
| |
|
|||||||| ||||||| | |||||||| |||||||||||| | |||||| ||||| |||| ||||||||||||||||| |||||||||||||||| || |
|
|
| T |
4256354 |
gatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaaccattg |
4256453 |
T |
|
| Q |
219 |
aaagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcag-ccagcaaactgcagatatatttgcaatgaatgggagattggaaagg |
316 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||||||||||||| | |||||| ||| ||||||| |||| |||||| | |||||||||||||||| | |
|
|
| T |
4256454 |
aaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatcagaccaacaaactgtagatttatttgtagcgaatgggagattggaattg |
4256553 |
T |
|
| Q |
317 |
aaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaagg |
406 |
Q |
| |
|
||||| |||||||||| ||||| || ||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |
|
|
| T |
4256554 |
aaatcaatactaatgtgaagagagatgaggtggagaatctgatcaatgaattgatgtcgggagaaaaaggaaagaagatgaggcaaaagg |
4256643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 35 - 372
Target Start/End: Complemental strand, 4458067 - 4457729
Alignment:
| Q |
35 |
aaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcg |
134 |
Q |
| |
|
||||| ||||||||||| | ||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||| ||| ||||||||| |||| | |
|
|
| T |
4458067 |
aaaccttttttgtggataactaggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatag |
4457968 |
T |
|
| Q |
135 |
caaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctgg |
234 |
Q |
| |
|
||| |||||||| ||||| |||| || |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4457967 |
caagttggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctgg |
4457868 |
T |
|
| Q |
235 |
agttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgta |
333 |
Q |
| |
|
||| |||||| | |||||||||| ||| | ||| ||||| ||| || |||| ||||||||||||||| |||||||| | |||||||||||| ||||| |
|
|
| T |
4457867 |
agtgccaatgctgcgttggccattctttggtgataagccaacaagttgtagatttatttgcaatgaatgagagattgggatggaaatcgatacaaatgtg |
4457768 |
T |
|
| Q |
334 |
aagagggaggaggtggagaaactggtcaatgaattgatg |
372 |
Q |
| |
|
||||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
4457767 |
aagagagatgaggtggagaagttagtcaatgaattgatg |
4457729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 20 - 410
Target Start/End: Original strand, 4504041 - 4504432
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| |||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||| || |||||||| || ||||||||||||| ||| |
|
|
| T |
4504041 |
ttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttcta |
4504140 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| || | |||| |||||||| ||||| |||| || |||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4504141 |
atagaggacttgtagcaagttggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactga |
4504240 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggcca-ttttttcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||| | ||||||||||| |||||||| ||||||||| ||||||| ||||||||| || ||| ||||||| | |||||||||||||| | | | |
|
|
| T |
4504241 |
aagtgtttgtgctggagtgccaatgttgtgttggccatttttttctgatcagccacttaatagcaacattatttgcgaagaatgggagattgggatgaag |
4504340 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|| ||| | |||||| |||| || ||||| |||||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4504341 |
attgatgccaatgtacagagagaagaggtagagaaacttattaatgaattgatggtgggagagaaaggaaagaagatgaggcaaaaggccat |
4504432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 4299465 - 4299673
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||| || |||||||||| ||||||| ||||||||||||| |
|
|
| T |
4299465 |
ttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaa |
4299564 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||||||| ||||| || |||||| ||||| |||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| |
|
|
| T |
4299565 |
atagaggcctaaccgcaagctagtgtccacaagaacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattga |
4299664 |
T |
|
| Q |
220 |
aagcatatg |
228 |
Q |
| |
|
||||||||| |
|
|
| T |
4299665 |
aagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 117 - 399
Target Start/End: Complemental strand, 4493346 - 4493063
Alignment:
| Q |
117 |
cagatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccac |
216 |
Q |
| |
|
|||||||||||||||| || | |||||||| |||||| || | | ||||||| ||| ||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
217 |
tgaaagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaag |
315 |
Q |
| |
|
||| ||||||||| ||||| |||||||| |||||||| || ||| | ||||||||| ||||||| |||| ||||||||||||| |||||||||| |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgtagattgatttgcaatgaattggagattggagta |
4493147 |
T |
|
| Q |
316 |
gaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgagg |
399 |
Q |
| |
|
|||||||||| ||||| || || || | |||||||| ||||||||||| | ||| ||||| |||||||| ||||||||| |
|
|
| T |
4493146 |
gaaatcgataggaatgttaatagagaaaatgtggagaatctggtcaatgagattatggttggagagaaaggaaacaagatgagg |
4493063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 245
Target Start/End: Original strand, 4391794 - 4391996
Alignment:
| Q |
47 |
tggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaa----tcgcaaactgg |
142 |
Q |
| |
|
||||||||||||| ||| |||||||||||| | ||| |||||||| || |||| || ||||||||||||||||||||| ||| |||||| ||| |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtgttttgttatatgagtatgagaatgaaatttcagatagaggtctatctagtcgcaagatgg |
4391893 |
T |
|
| Q |
143 |
tgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagttccaa |
242 |
Q |
| |
|
||||| ||||||||||||| |||||||||| |||| | |||||||| || ||||||||||| |||||| ||| ||||||||| ||| || ||||||||| |
|
|
| T |
4391894 |
tgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcatttgttctagagttccaa |
4391993 |
T |
|
| Q |
243 |
tgt |
245 |
Q |
| |
|
||| |
|
|
| T |
4391994 |
tgt |
4391996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 300 - 407
Target Start/End: Original strand, 4299671 - 4299778
Alignment:
| Q |
300 |
atgggagattggaaaggaaatcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgagg |
399 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | ||| ||||||||||| || ||| |||||||||||||| ||||| |||||| | |||||||| |
|
|
| T |
4299671 |
atgggagattggaatcgaaatcgatacaaatgtgaggagagaggaggtggaaaagctgatcaatgaattgatggtgggagagaaaggagataagatgaga |
4299770 |
T |
|
| Q |
400 |
caaaaggc |
407 |
Q |
| |
|
|||||||| |
|
|
| T |
4299771 |
caaaaggc |
4299778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 408
Target Start/End: Original strand, 3363 - 3752
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||||||||| |
|
|
| T |
3363 |
ttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcag |
3462 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||||||||| ||| ||||||||| |||||||||||| | | ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3463 |
atagaggcctaatcacaagctggtgtccacaagagcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactga |
3562 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||| |||||||| |||||| | ||||||||||| ||| | ||||||||| ||||||| |||| ||||||||| ||||||||||||||| ||| |
|
|
| T |
3563 |
aagcatatgcgctggagtaccaatgctttgttggccattctttggtgatcagccaacaaactgtagatttatttgcaacgaatgggagattggacttgaa |
3662 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggcc |
408 |
Q |
| |
|
||||||| |||| ||||| || ||||||||||| || ||||||||||||| | ||||| ||||||||||||||||||||||||||| |
|
|
| T |
3663 |
atcgatatggatgtgaagagagatgaggtggagaagctagtcaatgaattgacggtgggagagaaaggaaagaagatgaggcaaaaggcc |
3752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 20 - 404
Target Start/End: Complemental strand, 3086908 - 3086523
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||||||| ||| |||||||||| |
|
|
| T |
3086908 |
ttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcag |
3086809 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| |||||||||| ||||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
3086808 |
atagaggtctaatcgcaagctggtgtccgcaagagcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttga |
3086709 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||| || ||||||||| |||||||| ||||||||||||| | | ||||| ||| |||||| |||||||| |||||| |||||||||||||| ||| |
|
|
| T |
3086708 |
aagcgtacttgctggagtgccaatgttgtgttggccattttatggagatcaaccaataaactgtagatatatctgcaatatatgggagattggaattgaa |
3086609 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaa |
404 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3086608 |
atcgatactaatgtgaagagagaggaggtcgagaagctgatcaatgaattgatggtgggagataaaggaaagaagatgaggcaaaa |
3086523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 48532780 - 48532826
Alignment:
| Q |
167 |
cacccttcaattggcggattcttgactcattgtggatggaactcaac |
213 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||||| ||||| |
|
|
| T |
48532780 |
cacccttcaattggaggattcttaacacattgtggatggaattcaac |
48532826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 21 - 410
Target Start/End: Complemental strand, 1281601 - 1281211
Alignment:
| Q |
21 |
tggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcaga |
120 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||| |
|
|
| T |
1281601 |
tggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcaga |
1281502 |
T |
|
| Q |
121 |
tagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaa |
220 |
Q |
| |
|
|||||||||||| |||| |||||||| |||||| |||| || |||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1281501 |
tagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaa |
1281402 |
T |
|
| Q |
221 |
agcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaa |
319 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||| | ||||||||| || |||| |||| |||||| ||||||||| ||||||| | ||||| |
|
|
| T |
1281401 |
agcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgtaatgaatggaagattggtatggaaa |
1281302 |
T |
|
| Q |
320 |
tcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
||||||| ||||| ||||| |||||||||| || || ||||||||||||| |||| ||| |||||||||| ||||| |||||||||| |
|
|
| T |
1281301 |
tcgatacaaatgtgaagagagaggaggtggctaagttgatcaatgaattgatagccggggatgaaggaaagaatatgagagaaaaggccat |
1281211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 47 - 405
Target Start/End: Original strand, 16685938 - 16686297
Alignment:
| Q |
47 |
tggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcaaactggtgtc |
146 |
Q |
| |
|
|||||||||||| |||||||||||||| |||| || || ||||||||||| |||||| ||||||||| ||||||||| |||||||||| | |||||| | |
|
|
| T |
16685938 |
tggatcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcc |
16686037 |
T |
|
| Q |
147 |
ctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagttccaatgtt |
246 |
Q |
| |
|
| |||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
16686038 |
cgcaagagcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgtt |
16686137 |
T |
|
| Q |
247 |
atgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcgatactaatgtaaagagggaggag |
345 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||| | |||||| || || ||||| ||||| || ||| |
|
|
| T |
16686138 |
gtgttggccattttttgctgatcagccagcaaaatgcagatatatttgcaatgaatgggagattggcatggaaattgacaccaatgtgaagagagatgag |
16686237 |
T |
|
| Q |
346 |
gtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaag |
405 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| |||||||||||||||||| ||||| |
|
|
| T |
16686238 |
gtggagaaattggtcaatgaattgatggtgggagagaaaggaaagaagatgaggaaaaag |
16686297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 20 - 410
Target Start/End: Complemental strand, 1674714 - 1674323
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| |||||| |||| |||||||||| |
|
|
| T |
1674714 |
ttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcag |
1674615 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||||||||| |||| |||||||| |||||| |||| || |||||||||||||| |||||||||||||| || || |||||||||||||||||||| |
|
|
| T |
1674614 |
atagaggcctaatatcaaattggtgtccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactga |
1674515 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||| |||||||| |||||||| ||||||||||||||| | ||||||||| ||||||| |||| |||||| ||||||||| ||||||| | |||| |
|
|
| T |
1674514 |
aagcatatgcgctggagtgccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaa |
1674415 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|| ||||| ||||| ||||| |||| ||||||| || |||||||||||||| ||||| || ||||| |||||||||||||||||||| |
|
|
| T |
1674414 |
attgatacgaatgtgaagagagagggtttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaaggccat |
1674323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 20 - 405
Target Start/End: Original strand, 20863487 - 20863873
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| || |||| ||||| | |||||||||||||||||||| |
|
|
| T |
20863487 |
ttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtgaatgaaatttcag |
20863586 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
|||||||||||||||| | |||||||| |||||| | || || ||||| ||||||||||| ||||| | ||||||||||||||||||||||||| ||| |
|
|
| T |
20863587 |
atagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaactcaaccattga |
20863686 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
||||||||||||||||| |||||||| || |||||||||||| | |||||||| ||||||||||||| |||||||| ||||||||||||| | ||| |
|
|
| T |
20863687 |
gagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactgcagatacatttgcaacaaatgggagattgggatcgaa |
20863786 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaag |
405 |
Q |
| |
|
|| || || ||||| ||||| ||||||||||||| ||||| |||||||||||| ||||| ||||||| || ||||||||||||| |
|
|
| T |
20863787 |
attgacaccaatgtcaagagagaggaggtggagatgctggtaaatgaattgatggtgggagagaaaggaaggaggatgaggcaaaag |
20863873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 1969140 - 1969181
Alignment:
| Q |
173 |
tcaattggcggattcttgactcattgtggatggaactcaacc |
214 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| |||||| |
|
|
| T |
1969140 |
tcaattggtggattcttgactcattgtggctggaattcaacc |
1969181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 24 - 410
Target Start/End: Original strand, 4334 - 4721
Alignment:
| Q |
24 |
ccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatag |
123 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
4334 |
ccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatag |
4433 |
T |
|
| Q |
124 |
aggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagc |
223 |
Q |
| |
|
||||||||| || | ||||||||| |||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
4434 |
aggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagc |
4533 |
T |
|
| Q |
224 |
atatgtgctggagttccaatgttatgttggccattttt-tcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaatcg |
322 |
Q |
| |
|
||||||| ||||| |||||||| |||||||||||||| | ||||||||| |||||| | ||||| | | || |||||||| ||| | |||||| | |
|
|
| T |
4534 |
atatgtgtaggagtgccaatgttgtgttggccatttttcgccgatcagccaacaaactatcggtatatctcccatatatgggagactggtatggaaattg |
4633 |
T |
|
| Q |
323 |
atactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||||||||| ||||| ||| |||| ||| || |||||||||||||||| ||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4634 |
atactaatgtgaagagagagaaggtaacgaatatgatcaatgaattgatgtcgggagataaaggaatgaagatgaggcaaaaggccat |
4721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 180; Significance: 5e-97; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 20 - 406
Target Start/End: Complemental strand, 24103487 - 24103100
Alignment:
| Q |
20 |
ttggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcag |
119 |
Q |
| |
|
||||||||| ||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || ||| | || ||| |||||| |
|
|
| T |
24103487 |
ttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcag |
24103388 |
T |
|
| Q |
120 |
atagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactga |
219 |
Q |
| |
|
||||||| ||||| |||| |||||||| ||||| |||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24103387 |
atagaggactaatagcaagttggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactga |
24103288 |
T |
|
| Q |
220 |
aagcatatgtgctggagttccaatgttatgttggccattttttcg-gatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaa |
318 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||| ||| | ||||| ||| ||||||| |||| ||||||| ||||||||||||||||| ||| |
|
|
| T |
24103287 |
aagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaatgggagattggactcgaa |
24103188 |
T |
|
| Q |
319 |
atcgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaagg |
406 |
Q |
| |
|
|||||||| ||||| ||||| || || || ||||| | ||||||||||||||| ||||| || ||||||| ||||| |||||||| |
|
|
| T |
24103187 |
atcgatacaaatgtgaagagagatgacgtcgagaagttagtcaatgaattgatggtgggagagaacggaaagacgatgaagcaaaagg |
24103100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 22 - 410
Target Start/End: Original strand, 27999745 - 28000134
Alignment:
| Q |
22 |
ggccaattgcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagat |
121 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||| |||||| ||| |||||||||||| |
|
|
| T |
27999745 |
ggccaattgcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagat |
27999844 |
T |
|
| Q |
122 |
agaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaa |
221 |
Q |
| |
|
||||||||||| |||| |||||||| |||||| |||| || |||||||||||||| |||| ||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
27999845 |
agaggcctaatatcaaattggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaa |
27999944 |
T |
|
| Q |
222 |
gcatatgtgctggagttccaatgttatgttggccatttttt-cggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaaggaaat |
320 |
Q |
| |
|
||||||| |||||||| |||||||| |||||| |||||||| | ||||||||| ||||||| |||| |||||| ||||||||| ||||||| | |||||| |
|
|
| T |
27999945 |
gcatatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgtaatgaatggaagattggtatggaaat |
28000044 |
T |
|
| Q |
321 |
cgatactaatgtaaagagggaggaggtggagaaactggtcaatgaattgatgtccggagataaaggaaagaagatgaggcaaaaggccat |
410 |
Q |
| |
|
|||| ||||| |||| ||||| ||||||| || |||||||||||||| ||||| || ||||| |||||||||||||||||||| |
|
|
| T |
28000045 |
tgatatgaatgtgaagatagaggatttggagaagcttatcaatgaattgatggtgggagagaatggaaaaaagatgaggcaaaaggccat |
28000134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 20155247 - 20155290
Alignment:
| Q |
170 |
ccttcaattggcggattcttgactcattgtggatggaactcaac |
213 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
20155247 |
ccttcaattggaggattcttgacacattgtggatggaattcaac |
20155290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 356
Target Start/End: Original strand, 3428 - 3665
Alignment:
| Q |
119 |
gatagaggcctaatcgcaaactggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactg |
218 |
Q |
| |
|
|||| ||||||| |||||| |||||||| |||||||||| || |||||||||| | |||| |||||||| ||||||||||||||||||||||||| || |
|
|
| T |
3428 |
gatataggcctagtcgcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattg |
3526 |
T |
|
| Q |
219 |
aaagcatatgtgctggagttccaatgttatgttggccattttt-tcggatcagccagcaaactgcagatatatttgcaatgaatgggagattggaaagga |
317 |
Q |
| |
|
||||||| ||| |||||||||||||| | ||||||||||||| | || || || ||||||| |||| ||||| ||||||||||||||||||| || |
|
|
| T |
3527 |
aaagcatttgttctggagttccaatgctgcgttggccatttttccccgaacactcaacaaactgtagatgcatttggaatgaatgggagattggaagtga |
3626 |
T |
|
| Q |
318 |
aatcgatactaatgtaaagagggaggaggtggagaaact |
356 |
Q |
| |
|
||| ||| | ||||| ||||| ||||||||||||||||| |
|
|
| T |
3627 |
aatagattccaatgtgaagagagaggaggtggagaaact |
3665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 3163 - 3261
Alignment:
| Q |
30 |
gcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcc |
128 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||| |||||||||||||| ||| || ||||| || ||||||| |||||||| |||||||||||||| |
|
|
| T |
3163 |
gcaagaaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggcc |
3261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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