View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16180_high_10 (Length: 239)
Name: NF16180_high_10
Description: NF16180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16180_high_10 |
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Alignment Details
Target: chr8 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8934412 - 8934192
Alignment:
| Q |
1 |
attacgatgtgagattaaagtgaaaaatgattcaatgttcgtataaatttttatactgtcaatacataattactaaacgtcaaaaagagtgtcaggttag |
100 |
Q |
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| T |
8934412 |
attacgatttgagattaaagtgaaaaatgattcaatgttcgtataaatttttatactgtcaatacataattactaaacgtcaaaaagagtgtcaggttag |
8934313 |
T |
|
| Q |
101 |
catttctccaaagtatatagataaataaatataaggcaaaccataacagtaagcttactgctaatactggtggaagaccaccaagaacatctcctaaacc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
8934312 |
catttctccaaagtatatagataaataaatataaggcaaaccataacagtaagcttaccgctaatactggtggaagaccaccaagaacatctcctaaacc |
8934213 |
T |
|
| Q |
201 |
accagttttgctccatggacc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
8934212 |
accagttttgctccatggacc |
8934192 |
T |
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