View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16180_low_9 (Length: 258)
Name: NF16180_low_9
Description: NF16180
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16180_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 41623720 - 41623481
Alignment:
| Q |
1 |
aggttataaccgtgattcaaatttcaaaaacggtactttacatcattcacgccttgtgacagaaagtgcaaactgaataacaaatagtaaatgctgatcc |
100 |
Q |
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| T |
41623720 |
aggttataaccgtgattcaaatttcaaaaacggtactttacatcattcacgccttgtgacagaaagtgcaaactgaataacaaatagtaaatgctgatcc |
41623621 |
T |
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| Q |
101 |
aacaacaagcataaagtggtaaaacttttctttatcttttcacttttgtttattttccttctggcaggaaagacactgctgctgctgtaacatggaaaaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
41623620 |
aacaacaagcataaagtggtaaaacttttctttatcttttcacttttgtttattttccttctggcaggaaagacactactgctgctgtaacatggaaaaa |
41623521 |
T |
|
| Q |
201 |
tagaagggtagacactaatgtgctttacttgcattacatg |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
41623520 |
tagaagggtagacactaatgtgctttacttgcattacatg |
41623481 |
T |
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