View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16181_high_23 (Length: 202)
Name: NF16181_high_23
Description: NF16181
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16181_high_23 |
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Alignment Details
Target: chr3 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 23 - 166
Target Start/End: Original strand, 8162327 - 8162470
Alignment:
| Q |
23 |
tgcgatcaaacaccgtaaacatgctcaagactgtcattggttgctgcgtatattgcaatctatcttttagattgttatttgtcactatgtgtatcttgtc |
122 |
Q |
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| T |
8162327 |
tgcgatcaaacaccgtaaacatgctcaaggccgtcattggttgctgcatatattgcaatctatcttttagattgttatttgtaaccatgtgtatcttgtc |
8162426 |
T |
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| Q |
123 |
ttggaaataatgtgttaatctaaacccctgaaatatggaatttg |
166 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8162427 |
ttggaaataatgtgttaatctaaacccctgaaatatggaatttg |
8162470 |
T |
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