View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16182_low_10 (Length: 290)
Name: NF16182_low_10
Description: NF16182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16182_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 5 - 207
Target Start/End: Original strand, 16506159 - 16506361
Alignment:
| Q |
5 |
taatttgtagcatttgataatttgttaagtgtattataatgctgaaatatattaatttcaagcatgagatcattttttaagtgtgttacaaaagtttgag |
104 |
Q |
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| T |
16506159 |
taatttgaagcattggaacattttttaagtgtataataatgctgaaatatattaatttcaagcatgagatcattttttaagtgtgttacaaaagtttgag |
16506258 |
T |
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| Q |
105 |
ttcggaacaatctaagttttaaaactggtttaattctttttatagttaatatatgttttctgcaatttgagtttgaaacaattgatatgatttctatctc |
204 |
Q |
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| T |
16506259 |
ttcggaacaatctaagttttaaaactggtttaaatctttttgtagttaatatatgttttctgcaatttgagtttgaaacaattgatatgatttctatctc |
16506358 |
T |
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| Q |
205 |
tgc |
207 |
Q |
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||| |
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| T |
16506359 |
tgc |
16506361 |
T |
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