View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16182_low_7 (Length: 344)

Name: NF16182_low_7
Description: NF16182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16182_low_7
NF16182_low_7
[»] chr6 (33 HSPs)
chr6 (205-307)||(27322066-27322169)
chr6 (205-307)||(27318314-27318419)
chr6 (205-306)||(8659264-8659367)
chr6 (205-298)||(8821872-8821967)
chr6 (1-93)||(18989956-18990053)
chr6 (197-280)||(3721603-3721687)
chr6 (206-306)||(7314880-7314981)
chr6 (202-298)||(8660211-8660308)
chr6 (205-280)||(3722533-3722609)
chr6 (206-300)||(8822798-8822894)
chr6 (205-306)||(7316293-7316396)
chr6 (209-306)||(34834578-34834677)
chr6 (205-281)||(16704522-16704599)
chr6 (209-306)||(1829602-1829701)
chr6 (205-281)||(6842308-6842385)
chr6 (205-306)||(10784591-10784695)
chr6 (223-299)||(34830920-34830997)
chr6 (219-306)||(10785912-10786000)
chr6 (206-253)||(16703570-16703616)
chr6 (200-262)||(378495-378557)
chr6 (197-306)||(26575053-26575162)
chr6 (195-306)||(3333025-3333138)
chr6 (205-261)||(35102490-35102547)
chr6 (204-261)||(18791605-18791664)
chr6 (205-306)||(27437827-27437930)
chr6 (205-297)||(14822359-14822453)
chr6 (205-306)||(26574618-26574720)
chr6 (209-261)||(4597408-4597461)
chr6 (205-261)||(18749096-18749153)
chr6 (110-142)||(11694242-11694274)
chr6 (214-261)||(14572186-14572234)
chr6 (205-297)||(14823583-14823678)
chr6 (194-261)||(32451714-32451782)
[»] chr4 (52 HSPs)
chr4 (203-307)||(14868887-14868991)
chr4 (203-307)||(14876943-14877047)
chr4 (194-302)||(49308031-49308139)
chr4 (205-306)||(5526125-5526227)
chr4 (206-306)||(10471387-10471489)
chr4 (202-306)||(5525356-5525461)
chr4 (208-306)||(19750574-19750673)
chr4 (208-306)||(19789133-19789232)
chr4 (205-306)||(25685821-25685924)
chr4 (205-306)||(1290197-1290300)
chr4 (205-306)||(48780247-48780350)
chr4 (206-306)||(25684934-25685036)
chr4 (204-306)||(10470544-10470648)
chr4 (205-304)||(17388212-17388312)
chr4 (205-306)||(1963195-1963298)
chr4 (205-299)||(13386013-13386111)
chr4 (203-306)||(13386531-13386637)
chr4 (200-306)||(17382987-17383094)
chr4 (205-306)||(1835101-1835204)
chr4 (203-306)||(31599786-31599891)
chr4 (206-306)||(10447006-10447109)
chr4 (205-281)||(26421647-26421723)
chr4 (205-306)||(13509358-13509460)
chr4 (195-306)||(48781045-48781157)
chr4 (203-281)||(3928883-3928962)
chr4 (209-306)||(12129626-12129725)
chr4 (204-281)||(8758862-8758940)
chr4 (206-306)||(31600984-31601086)
chr4 (206-306)||(1834119-1834222)
chr4 (205-281)||(8757674-8757750)
chr4 (209-306)||(8155741-8155839)
chr4 (205-281)||(49306774-49306850)
chr4 (203-261)||(25011982-25012041)
chr4 (195-261)||(47869901-47869968)
chr4 (111-145)||(1688188-1688222)
chr4 (204-281)||(3927664-3927742)
chr4 (203-258)||(15058817-15058873)
chr4 (209-265)||(35934347-35934402)
chr4 (209-299)||(35935539-35935631)
chr4 (205-306)||(52491606-52491709)
chr4 (206-306)||(1964440-1964542)
chr4 (302-332)||(14869003-14869033)
chr4 (302-332)||(14876901-14876931)
chr4 (205-306)||(21177996-21178098)
chr4 (209-261)||(4357499-4357552)
chr4 (205-261)||(13826419-13826476)
chr4 (195-306)||(21539070-21539183)
chr4 (205-261)||(43793630-43793687)
chr4 (206-261)||(13394536-13394592)
chr4 (206-261)||(13397675-13397731)
chr4 (198-261)||(13397923-13397987)
chr4 (209-281)||(37728590-37728662)
[»] chr3 (61 HSPs)
chr3 (205-307)||(5029681-5029784)
chr3 (195-287)||(5001189-5001282)
chr3 (197-306)||(47610579-47610690)
chr3 (206-306)||(51469972-51470074)
chr3 (195-306)||(22776811-22776924)
chr3 (205-306)||(47609696-47609799)
chr3 (203-306)||(54540789-54540894)
chr3 (196-306)||(12703499-12703610)
chr3 (206-306)||(47614185-47614287)
chr3 (205-281)||(12700174-12700249)
chr3 (209-299)||(7267647-7267738)
chr3 (205-306)||(29931225-29931328)
chr3 (205-306)||(29980379-29980482)
chr3 (205-280)||(51470481-51470556)
chr3 (205-305)||(7758401-7758503)
chr3 (195-306)||(29932698-29932810)
chr3 (195-306)||(29981852-29981964)
chr3 (204-306)||(55191994-55192097)
chr3 (198-299)||(8456470-8456572)
chr3 (206-306)||(52840603-52840705)
chr3 (205-281)||(19984848-19984925)
chr3 (200-281)||(28262187-28262268)
chr3 (206-306)||(51037536-51037637)
chr3 (209-265)||(7268868-7268924)
chr3 (204-310)||(24516458-24516566)
chr3 (205-263)||(47615591-47615650)
chr3 (205-281)||(52281572-52281649)
chr3 (206-300)||(535787-535883)
chr3 (198-261)||(3328805-3328869)
chr3 (204-281)||(54539753-54539831)
chr3 (205-262)||(11671385-11671442)
chr3 (205-261)||(22447739-22447796)
chr3 (205-281)||(52276303-52276380)
chr3 (203-306)||(52839034-52839139)
chr3 (205-299)||(534498-534594)
chr3 (206-261)||(27852753-27852809)
chr3 (204-306)||(46721219-46721323)
chr3 (206-281)||(18456088-18456165)
chr3 (203-261)||(20001956-20002014)
chr3 (213-259)||(22775783-22775829)
chr3 (205-261)||(22500595-22500652)
chr3 (205-261)||(26628024-26628081)
chr3 (205-261)||(28173728-28173785)
chr3 (205-281)||(28263136-28263213)
chr3 (206-261)||(8338940-8338996)
chr3 (206-261)||(28154882-28154938)
chr3 (198-281)||(51038815-51038899)
chr3 (232-306)||(31645000-31645075)
chr3 (302-332)||(5001320-5001350)
chr3 (302-332)||(5029639-5029669)
chr3 (202-281)||(18442626-18442707)
chr3 (202-281)||(19487700-19487781)
chr3 (205-258)||(19986120-19986174)
chr3 (205-258)||(25179826-25179880)
chr3 (205-258)||(32960644-32960698)
chr3 (206-279)||(49216247-49216321)
chr3 (205-261)||(13081142-13081199)
chr3 (205-261)||(34878528-34878585)
chr3 (205-261)||(46673044-46673101)
chr3 (190-261)||(4775834-4775906)
chr3 (206-281)||(46719941-46720017)
[»] chr7 (38 HSPs)
chr7 (205-279)||(34174010-34174084)
chr7 (205-300)||(127336-127431)
chr7 (205-300)||(17782558-17782655)
chr7 (205-306)||(3227593-3227696)
chr7 (205-306)||(31949321-31949424)
chr7 (207-306)||(3227109-3227209)
chr7 (208-306)||(17781663-17781763)
chr7 (206-306)||(47525366-47525468)
chr7 (205-306)||(7501851-7501954)
chr7 (205-306)||(31949801-31949904)
chr7 (203-306)||(7500452-7500556)
chr7 (219-305)||(18372457-18372544)
chr7 (213-279)||(47524532-47524599)
chr7 (206-298)||(18371424-18371518)
chr7 (203-306)||(128600-128705)
chr7 (206-306)||(31659622-31659725)
chr7 (195-261)||(8527042-8527109)
chr7 (205-305)||(22630452-22630554)
chr7 (199-305)||(11658372-11658480)
chr7 (211-306)||(14999154-14999249)
chr7 (197-261)||(20636866-20636931)
chr7 (198-277)||(20163585-20163665)
chr7 (209-306)||(42886285-42886384)
chr7 (205-306)||(21505415-21505516)
chr7 (233-306)||(22629514-22629588)
chr7 (204-306)||(11662550-11662654)
chr7 (197-306)||(47369772-47369883)
chr7 (204-261)||(27869194-27869252)
chr7 (204-261)||(42271580-42271638)
chr7 (206-261)||(36746751-36746806)
chr7 (204-261)||(3562431-3562489)
chr7 (204-261)||(19195212-19195270)
chr7 (205-258)||(21690415-21690469)
chr7 (205-263)||(14998007-14998067)
chr7 (205-261)||(24597516-24597573)
chr7 (205-260)||(5490924-5490980)
chr7 (205-261)||(21224353-21224409)
chr7 (198-261)||(39182181-39182245)
[»] chr1 (44 HSPs)
chr1 (195-306)||(52827336-52827449)
chr1 (206-306)||(41364829-41364930)
chr1 (209-306)||(45149969-45150068)
chr1 (144-205)||(26371972-26372033)
chr1 (198-306)||(41366130-41366239)
chr1 (209-306)||(52828069-52828168)
chr1 (206-306)||(39699766-39699867)
chr1 (205-281)||(14999284-14999360)
chr1 (205-306)||(24422799-24422902)
chr1 (202-281)||(45157234-45157313)
chr1 (209-306)||(7983053-7983151)
chr1 (197-306)||(35594208-35594317)
chr1 (204-281)||(52274966-52275044)
chr1 (198-306)||(37526877-37526986)
chr1 (195-306)||(51684355-51684468)
chr1 (204-306)||(24426074-24426178)
chr1 (205-306)||(51685764-51685867)
chr1 (206-306)||(36613903-36614005)
chr1 (206-306)||(45148581-45148682)
chr1 (203-306)||(33088616-33088721)
chr1 (209-304)||(43058789-43058885)
chr1 (205-306)||(23980465-23980568)
chr1 (205-281)||(11437224-11437301)
chr1 (191-306)||(50680319-50680433)
chr1 (205-281)||(7674527-7674602)
chr1 (196-306)||(11436032-11436144)
chr1 (205-306)||(35067001-35067104)
chr1 (206-278)||(39222501-39222575)
chr1 (204-261)||(4059520-4059578)
chr1 (198-299)||(39698555-39698657)
chr1 (203-306)||(39153115-39153220)
chr1 (202-306)||(43378712-43378817)
chr1 (205-261)||(46432215-46432272)
chr1 (205-306)||(35595191-35595295)
chr1 (204-306)||(36612851-36612954)
chr1 (204-258)||(24750020-24750075)
chr1 (203-281)||(44404439-44404518)
chr1 (207-261)||(48471864-48471919)
chr1 (205-306)||(7675458-7675560)
chr1 (219-281)||(39151945-39152007)
chr1 (205-261)||(51719122-51719179)
chr1 (203-266)||(14999995-15000059)
chr1 (206-261)||(24962201-24962257)
chr1 (209-272)||(52276197-52276261)
[»] chr8 (47 HSPs)
chr8 (17-93)||(30338459-30338535)
chr8 (205-306)||(5513981-5514083)
chr8 (206-306)||(10006344-10006446)
chr8 (199-306)||(12353360-12353467)
chr8 (201-304)||(22221365-22221470)
chr8 (201-304)||(22227707-22227812)
chr8 (215-306)||(18978029-18978121)
chr8 (205-306)||(10007762-10007865)
chr8 (215-306)||(18970920-18971012)
chr8 (223-306)||(24488679-24488762)
chr8 (209-279)||(29968364-29968434)
chr8 (195-281)||(32207350-32207435)
chr8 (204-300)||(5003103-5003199)
chr8 (204-306)||(8388462-8388564)
chr8 (211-299)||(1824084-1824174)
chr8 (211-299)||(1858529-1858619)
chr8 (204-299)||(12351919-12352016)
chr8 (205-281)||(24122882-24122958)
chr8 (204-306)||(30335637-30335741)
chr8 (198-281)||(38980069-38980153)
chr8 (198-281)||(39011166-39011250)
chr8 (209-306)||(11287779-11287878)
chr8 (207-281)||(18979145-18979220)
chr8 (206-306)||(22220388-22220490)
chr8 (206-262)||(24483143-24483200)
chr8 (205-281)||(32968455-32968532)
chr8 (201-280)||(1823547-1823627)
chr8 (201-280)||(1857992-1858072)
chr8 (205-261)||(19391387-19391443)
chr8 (206-281)||(32973961-32974037)
chr8 (206-281)||(38974795-38974871)
chr8 (206-281)||(39005893-39005969)
chr8 (205-306)||(24123897-24123997)
chr8 (204-261)||(5192270-5192328)
chr8 (205-261)||(4518868-4518925)
chr8 (205-261)||(4807599-4807656)
chr8 (205-261)||(11456637-11456694)
chr8 (206-271)||(23170034-23170098)
chr8 (205-261)||(44147218-44147275)
chr8 (206-258)||(3819489-3819541)
chr8 (205-263)||(11288902-11288962)
chr8 (203-254)||(45114568-45114620)
chr8 (209-306)||(11282011-11282110)
chr8 (110-141)||(30338410-30338441)
chr8 (205-306)||(5514270-5514371)
chr8 (205-261)||(33895621-33895678)
chr8 (201-261)||(36249547-36249608)
[»] chr2 (36 HSPs)
chr2 (197-306)||(36449769-36449880)
chr2 (195-306)||(38840492-38840605)
chr2 (206-299)||(1034475-1034570)
chr2 (209-306)||(28617926-28618023)
chr2 (204-306)||(22848189-22848293)
chr2 (205-301)||(7899886-7899984)
chr2 (205-298)||(18905995-18906089)
chr2 (205-304)||(18904366-18904467)
chr2 (202-281)||(802616-802695)
chr2 (209-306)||(36450920-36451018)
chr2 (203-306)||(11258810-11258915)
chr2 (205-306)||(18797245-18797349)
chr2 (198-306)||(18300724-18300831)
chr2 (205-298)||(11938796-11938890)
chr2 (205-306)||(23869534-23869636)
chr2 (205-281)||(18868923-18869000)
chr2 (204-306)||(22587953-22588056)
chr2 (204-263)||(21837298-21837356)
chr2 (205-306)||(38839241-38839344)
chr2 (206-306)||(18299373-18299475)
chr2 (206-306)||(41878092-41878196)
chr2 (205-281)||(41879237-41879314)
chr2 (207-271)||(1033212-1033275)
chr2 (207-298)||(13030293-13030383)
chr2 (198-281)||(32739615-32739699)
chr2 (209-306)||(7898694-7898793)
chr2 (204-306)||(13567970-13568072)
chr2 (204-281)||(24475223-24475300)
chr2 (205-261)||(30714274-30714331)
chr2 (206-261)||(9787805-9787861)
chr2 (206-281)||(24476869-24476943)
chr2 (200-261)||(2986934-2986996)
chr2 (233-281)||(810806-810854)
chr2 (195-235)||(20347489-20347529)
chr2 (206-258)||(21837070-21837121)
chr2 (206-261)||(38716440-38716496)
[»] chr5 (37 HSPs)
chr5 (203-306)||(19752909-19753013)
chr5 (205-306)||(5778835-5778938)
chr5 (205-306)||(5777900-5778001)
chr5 (205-306)||(25523068-25523171)
chr5 (1-93)||(23915469-23915566)
chr5 (194-304)||(22940624-22940738)
chr5 (205-306)||(18486901-18487004)
chr5 (205-306)||(28538675-28538778)
chr5 (205-280)||(5730440-5730517)
chr5 (200-281)||(18485132-18485214)
chr5 (195-306)||(28539819-28539931)
chr5 (205-306)||(19754129-19754233)
chr5 (204-306)||(36486487-36486591)
chr5 (206-299)||(25056387-25056482)
chr5 (206-306)||(20214196-20214297)
chr5 (205-306)||(16650854-16650957)
chr5 (198-306)||(1015476-1015586)
chr5 (234-280)||(5730888-5730934)
chr5 (204-281)||(33158096-33158174)
chr5 (205-261)||(18695250-18695307)
chr5 (203-306)||(24332910-24333015)
chr5 (204-261)||(25556875-25556932)
chr5 (205-265)||(33160327-33160388)
chr5 (195-306)||(21835030-21835142)
chr5 (209-306)||(20216762-20216861)
chr5 (205-306)||(25055411-25055514)
chr5 (205-281)||(25524152-25524230)
chr5 (205-258)||(23765419-23765473)
chr5 (205-258)||(23815267-23815321)
chr5 (209-306)||(42195137-42195234)
chr5 (205-261)||(31055314-31055371)
chr5 (202-261)||(24025017-24025077)
chr5 (196-306)||(40255671-40255783)
chr5 (246-306)||(25524097-25524158)
chr5 (226-279)||(34893686-34893739)
chr5 (209-261)||(40428642-40428695)
chr5 (194-261)||(245842-245910)
[»] scaffold0302 (2 HSPs)
scaffold0302 (205-306)||(17469-17572)
scaffold0302 (206-281)||(18801-18877)
[»] scaffold0294 (2 HSPs)
scaffold0294 (205-301)||(5442-5540)
scaffold0294 (205-301)||(4441-4539)
[»] scaffold0186 (2 HSPs)
scaffold0186 (206-306)||(23081-23181)
scaffold0186 (205-289)||(23907-23992)
[»] scaffold0320 (1 HSPs)
scaffold0320 (205-306)||(19487-19590)
[»] scaffold2034 (1 HSPs)
scaffold2034 (206-306)||(233-335)
[»] scaffold0632 (1 HSPs)
scaffold0632 (205-306)||(3307-3409)
[»] scaffold0019 (2 HSPs)
scaffold0019 (206-306)||(60090-60192)
scaffold0019 (198-306)||(61458-61568)
[»] scaffold0112 (1 HSPs)
scaffold0112 (206-301)||(37148-37244)
[»] scaffold0049 (1 HSPs)
scaffold0049 (195-306)||(7414-7527)
[»] scaffold0419 (1 HSPs)
scaffold0419 (206-261)||(2961-3017)
[»] scaffold0227 (1 HSPs)
scaffold0227 (206-281)||(144-220)
[»] scaffold1303 (1 HSPs)
scaffold1303 (205-306)||(1438-1541)
[»] scaffold0369 (1 HSPs)
scaffold0369 (194-281)||(13181-13267)
[»] scaffold0093 (2 HSPs)
scaffold0093 (207-281)||(2490-2564)
scaffold0093 (207-281)||(7113-7187)
[»] scaffold0607 (1 HSPs)
scaffold0607 (204-261)||(2046-2104)
[»] scaffold0059 (2 HSPs)
scaffold0059 (207-281)||(4755-4829)
scaffold0059 (225-265)||(3695-3735)
[»] scaffold0045 (1 HSPs)
scaffold0045 (206-281)||(49109-49185)
[»] scaffold0025 (1 HSPs)
scaffold0025 (203-258)||(62069-62125)
[»] scaffold0060 (1 HSPs)
scaffold0060 (204-258)||(66424-66479)
[»] scaffold0003 (1 HSPs)
scaffold0003 (205-306)||(49432-49535)
[»] scaffold0179 (1 HSPs)
scaffold0179 (205-261)||(5649-5706)
[»] scaffold0024 (1 HSPs)
scaffold0024 (197-261)||(43815-43880)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 27322169 - 27322066
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcc-cccctaagaattagcccctt 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27322169 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagcccctt 27322070  T
Q  304 tgct 307  Q
    ||||    
T  27322069 tgct 27322066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 205 - 307
Target Start/End: Original strand, 27318314 - 27318419
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt---tcccccctaagaattagcccc 301  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||    
T  27318314 aggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttcccccccccctaagaattagcccc 27318413  T
Q  302 tttgct 307  Q
    ||||||    
T  27318414 tttgct 27318419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 8659264 - 8659367
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||     
T  8659264 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 8659363  T
Q  303 ttgc 306  Q
    ||||    
T  8659364 ttgc 8659367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 8821872 - 8821967
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagc 298  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  8821872 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagc 8821967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 18989956 - 18990053
Alignment:
Q  1 cctcttctttctcccattccctcttct-------atcttctccatatatataggggaaagacttccaattaccaattgacgaaaatacccctataagggc 93  Q
    |||||||||||||||||||||||||||       |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  18989956 cctcttctttctcccattccctcttctctcttctatcttctccatatatat--gggaaagacttccaattaccaattgacgaaaatacccttataagggc 18990053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 197 - 280
Target Start/End: Original strand, 3721603 - 3721687
Alignment:
Q  197 taaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||| ||||||||||||||||||||||||| ||| ||||||||| |||||||||||| |||||||||||||||||||| |||||    
T  3721603 taaaacaaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataattt 3721687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 7314880 - 7314981
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||||| |||||| ||||||||  |||||||||| ||||||||||    
T  7314880 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtatcaaaacaacaattttgaccccctaagatttagcccctt 7314978  T
Q  304 tgc 306  Q
    |||    
T  7314979 tgc 7314981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 298
Target Start/End: Complemental strand, 8660308 - 8660211
Alignment:
Q  202 taaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagc 298  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||| |||||||||||||||||||||  ||||||||||| |||||    
T  8660308 taaaggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccc-taagtaccaaaaccacaatttagcccccctaagatttagc 8660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 3722609 - 3722533
Alignment:
Q  205 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  3722609 aggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaattt 3722533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 8822894 - 8822798
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagccc 300  Q
    |||||||||||||||||||| | | | ||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||    
T  8822894 ggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 8822798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 7316396 - 7316293
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| ||   |||||||||||||  |||| ||||| |||||||||    
T  7316396 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccct 7316297  T
Q  303 ttgc 306  Q
    ||||    
T  7316296 ttgc 7316293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 34834677 - 34834578
Alignment:
Q  209 taaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||  | |||||||| ||||||||||||||  ||||||||||| |||||||| ||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 34834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 16704599 - 16704522
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||| |||| | ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  16704599 aggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 16704522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 1829701 - 1829602
Alignment:
Q  209 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||  ||||||| |||| |||| |||||||||||| |||||||||||  ||||| ||||||||  |||||||||| |||||||||||||    
T  1829701 taaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccctttgc 1829602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 6842385 - 6842308
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||| |||  ||||||||  ||||||||||||||||||| || | ||||| ||||||||    
T  6842385 aggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 10784591 - 10784695
Alignment:
Q  205 aggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||||||||||||||||||| ||  || |||| |||| |||||||||||  |||||||||||  ||||| ||||||||  ||||| |||| ||||||||    
T  10784591 aggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccc 10784690  T
Q  302 tttgc 306  Q
    |||||    
T  10784691 tttgc 10784695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 34830920 - 34830997
Alignment:
Q  223 cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcc 299  Q
    |||||| | |||||||||  |||||  |||||||||||||||||||||||||||||||  ||||||||||| ||||||    
T  34830920 ccccccgaactttcaaaaatttgcatatttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 34830997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 219 - 306
Target Start/End: Complemental strand, 10786000 - 10785912
Alignment:
Q  219 ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    |||||||||||| |||| ||||  ||||||||||  |||||||||||| ||||| ||||||||  |||| ||||| |||||||||||||    
T  10786000 ttttcccccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgc 10785912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 16703570 - 16703616
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttg 253  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16703570 ggctaaagtgcacttttcccc-ctatctttcaaaaacttgcaattttg 16703616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 378557 - 378495
Alignment:
Q  200 aataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaa 262  Q
    |||||||||| || |||||||||  |||||||||||| |||| |||| |||||||||||||||    
T  378557 aataaaggcttaattgcacttttgacccctatctttccaaatgttgcgattttggccccctaa 378495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 26575162 - 26575053
Alignment:
Q  197 taaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatt 295  Q
    ||||||||||  ||||||||||||| || | ||| ||||||||| |||||||||||  |||| ||||||| ||||| ||||||||  |||||||||| ||    
T  26575162 taaaataaagattaaagtgcacttt-cctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagattt 26575064  T
Q  296 agcccctttgc 306  Q
    | | |||||||    
T  26575063 aactcctttgc 26575053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 3333138 - 3333025
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    |||||| ||||||||||| |||||||||||||  |||  ||| ||||  |||| |||||||||||||| |||| ||||| ||||||||  ||| |||| |    
T  3333138 aataaagtaaaggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaa 3333039  T
Q  293 attagcccctttgc 306  Q
     |||||||||||||    
T  3333038 tttagcccctttgc 3333025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 35102490 - 35102547
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| ||||| ||||||||    
T  35102490 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttagcccccta 35102547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 18791664 - 18791605
Alignment:
Q  204 aaggctaaagtgcacttttc--ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||||  |||||||| ||| ||||| |||| ||||||||||||||    
T  18791664 aaggctaaagtgcacttttcgtccccctatgttttaaaatgttgcgattttggcccccta 18791605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 27437827 - 27437930
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||| |||| || |||| ||||  |||||||||||||||||||   |  ||||| ||||||||  |||||||||| ||||| |||    
T  27437827 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcct 27437926  T
Q  303 ttgc 306  Q
    ||||    
T  27437927 ttgc 27437930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 297
Target Start/End: Original strand, 14822359 - 14822453
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattag 297  Q
    |||||| |||||||||||| ||||| |  |||||||| ||||||||||||||||| ||||||   |||| ||||||||  |||||||||| ||||    
T  14822359 aggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 26574618 - 26574720
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagcccctt 303  Q
    ||||||||||||| ||| || || ||| ||||||||| ||||||||||||  || |||||||| ||||| ||| |||   ||| ||||| ||||||||||    
T  26574618 aggctaaagtgcaatttcccacctctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactacattttgatcccttaagatttagcccctt 26574717  T
Q  304 tgc 306  Q
    |||    
T  26574718 tgc 26574720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 4597408 - 4597461
Alignment:
Q  209 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||    
T  4597408 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtccccta 4597461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 18749096 - 18749153
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| ||||| || ||| ||||| |||||||||||||||||||    
T  18749096 aggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggcccccta 18749153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 11694242 - 11694274
Alignment:
Q  110 tggacatggattgtcctatatagtttagtagaa 142  Q
    ||||||| |||||||||||||||||||||||||    
T  11694242 tggacattgattgtcctatatagtttagtagaa 11694274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 14572186 - 14572234
Alignment:
Q  214 tgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||| |||||||| ||| ||||| |||||||||||||||||||    
T  14572186 tgcacttttcgccccctatgttttaaaatgttgcaattttggcccccta 14572234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 297
Target Start/End: Complemental strand, 14823678 - 14823583
Alignment:
Q  205 aggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattag 297  Q
    ||||||||||||||||||  ||||| ||  ||| |||| ||||||||||| ||||| |||||||  |||| ||||||||  |||||||||| ||||    
T  14823678 aggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 32451714 - 32451782
Alignment:
Q  194 aaataaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| | |||||||| ||| |||  ||||||||| |||  ||||||||||||||    
T  32451714 aaataaaataaaggctaaacttcacttttcgccctctaagtttcaaaatgttgtgattttggcccccta 32451782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 7e-43; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 14868887 - 14868991
Alignment:
Q  203 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||     
T  14868887 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagcccca 14868986  T
Q  303 ttgct 307  Q
    |||||    
T  14868987 ttgct 14868991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 14877047 - 14876943
Alignment:
Q  203 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||     
T  14877047 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagcccca 14876948  T
Q  303 ttgct 307  Q
    |||||    
T  14876947 ttgct 14876943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 194 - 302
Target Start/End: Complemental strand, 49308139 - 49308031
Alignment:
Q  194 aaataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaa 293  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| ||     
T  49308139 aaataaaaaataggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccctatgat 49308040  T
Q  294 ttagcccct 302  Q
    || ||||||    
T  49308039 tttgcccct 49308031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 5526227 - 5526125
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||| |    
T  5526227 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccat 5526128  T
Q  304 tgc 306  Q
    |||    
T  5526127 tgc 5526125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 10471489 - 10471387
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |    
T  10471489 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 10471390  T
Q  304 tgc 306  Q
    |||    
T  10471389 tgc 10471387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 202 - 306
Target Start/End: Original strand, 5525356 - 5525461
Alignment:
Q  202 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagccc 300  Q
    ||||||||||||| || |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||    
T  5525356 taaaggctaaagtacatttttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 5525455  T
Q  301 ctttgc 306  Q
    | ||||    
T  5525456 cattgc 5525461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 208 - 306
Target Start/End: Complemental strand, 19750673 - 19750574
Alignment:
Q  208 ctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||| ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 19789133 - 19789232
Alignment:
Q  208 ctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||| ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 25685924 - 25685821
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||     
T  25685924 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagcccca 25685825  T
Q  303 ttgc 306  Q
    ||||    
T  25685824 ttgc 25685821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 1290300 - 1290197
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||| ||||||||  |||||||||| ||| |||||    
T  1290300 aggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccct 1290201  T
Q  303 ttgc 306  Q
    ||||    
T  1290200 ttgc 1290197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 48780247 - 48780350
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    |||||||||||||||||||||||| || |||| |||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| ||||||||     
T  48780247 aggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 48780346  T
Q  303 ttgc 306  Q
    ||||    
T  48780347 ttgc 48780350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 25684934 - 25685036
Alignment:
Q  206 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctt 303  Q
    ||||||||||||||||||||||| || ||||||||| |||||||||||| ||| ||||||||||||||||||||||  ||||||||||| |||||||| |    
T  25684934 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagccccat 25685033  T
Q  304 tgc 306  Q
    |||    
T  25685034 tgc 25685036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 10470544 - 10470648
Alignment:
Q  204 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccc 301  Q
    |||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||||| ||||||||  ||||||||||| ||||||||    
T  10470544 aaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagcccc 10470643  T
Q  302 tttgc 306  Q
     ||||    
T  10470644 attgc 10470648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 205 - 304
Target Start/End: Complemental strand, 17388312 - 17388212
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||  |||| ||||||||  ||||| |||||||||||||||    
T  17388312 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagcccctt 17388213  T
Q  304 t 304  Q
    |    
T  17388212 t 17388212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 1963195 - 1963298
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||| | |||||||||  |||||||||||||| |||| |||| ||||| ||||||||  ||||||||||||||||||||    
T  1963195 aggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccct 1963294  T
Q  303 ttgc 306  Q
    ||||    
T  1963295 ttgc 1963298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 13386013 - 13386111
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaat-cttgcaattttggccccctaagtaccaaaaccacaatt--ttcccccctaagaattagcc 299  Q
    ||||||||||||||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||||||||  | ||||||||||| ||||||    
T  13386013 aggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 13386637 - 13386531
Alignment:
Q  203 aaaggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcc 299  Q
    ||||||||||||||||||||  |||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||  |||||||||||  |||||    
T  13386637 aaaggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcc 13386538  T
Q  300 cctttgc 306  Q
    || ||||    
T  13386537 ccattgc 13386531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 17382987 - 17383094
Alignment:
Q  200 aataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagc 298  Q
    |||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||| ||| ||||||| ||||| ||||||||  ||||| |||||||| |    
T  17382987 aatataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatc 17383086  T
Q  299 ccctttgc 306  Q
    ||||||||    
T  17383087 ccctttgc 17383094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 1835204 - 1835101
Alignment:
Q  205 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||  ||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||  |||||||||| |||||||||    
T  1835204 aggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccct 1835105  T
Q  303 ttgc 306  Q
    ||||    
T  1835104 ttgc 1835101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 31599786 - 31599891
Alignment:
Q  203 aaaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||||| |||||||||||| |||||||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||   ||||||||| |||||||    
T  31599786 aaaggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagccc 31599885  T
Q  301 ctttgc 306  Q
    ||||||    
T  31599886 ctttgc 31599891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 10447006 - 10447109
Alignment:
Q  206 ggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||   ||  ||||||||  |||||||||| |||||||| |||| |||||||||||||| ||||||||||| |||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  303 ttgc 306  Q
    ||||    
T  10447106 ttgc 10447109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 26421723 - 26421647
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||| || ||||||||| ||||| ||||||||    
T  26421723 aggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaatttt 26421647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 13509460 - 13509358
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||| |||||||||||||| |||| ||||  ||||||||||||||||| |||||  ||||| ||||||||   ||||||||| ||||||||||    
T  13509460 aggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagcccctt 13509361  T
Q  304 tgc 306  Q
    |||    
T  13509360 tgc 13509358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 48781157 - 48781045
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 292  Q
    ||||| || |||||||||||||||||||||||| ||| |||||||||  ||||||||||||  |||||||||| |||||||||||||  ||||||||| |    
T  48781157 aataatatgaaggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttgg-tccctaagtactaaaaccacaatttagcccccctaaaa 48781059  T
Q  293 attagcccctttgc 306  Q
     |||||||| ||||    
T  48781058 tttagccccattgc 48781045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 3928962 - 3928883
Alignment:
Q  203 aaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||||||| || |||||||||  |||| |||||||||||||| |||  ||||||||||||||    
T  3928962 aaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccctatgtatgaaaaccacaatttt 3928883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 12129626 - 12129725
Alignment:
Q  209 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    |||||||||||||||||| || | ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||  |||| ||||| ||||||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 281
Target Start/End: Complemental strand, 8758940 - 8758862
Alignment:
Q  204 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||| |||| |||||||||||||||| | ||||||||| |||||||||||||||||||||||||  |||| ||||||||    
T  8758940 aaggttaaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaatttt 8758862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 31601086 - 31600984
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||||||||| |||| ||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||  |||| ||||| ||||||| ||    
T  31601086 ggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatttagcccatt 31600987  T
Q  304 tgc 306  Q
    |||    
T  31600986 tgc 31600984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 1834119 - 1834222
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt--cccccctaagaattagcccct 302  Q
    |||||||||||||||||||||| ||| |||| |||| ||| |||||||| ||||||| |||  ||||| ||||||||  ||||||||||| ||||||| |    
T  1834119 ggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagcccat 1834218  T
Q  303 ttgc 306  Q
    ||||    
T  1834219 ttgc 1834222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 8757674 - 8757750
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||| |||| || ||||||||| ||| ||||||| |||||||||||||  |||| ||||||||    
T  8757674 aggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaatttt 8757750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 8155741 - 8155839
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggc-cccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||| || ||||||||| ||||||||||| || ||||||||| | ||||| ||||||||  |||||||||| |||||| ||||||    
T  8155741 taaagtgcacttttccccc-taactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgc 8155839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 49306774 - 49306850
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||  |||| | ||||||||| |||||||||||||||   ||||||| ||||| ||||||||    
T  49306774 aggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaatttt 49306850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 25012041 - 25011982
Alignment:
Q  203 aaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||| |||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  25012041 aaaggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggcccccta 25011982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 47869968 - 47869901
Alignment:
Q  195 aataaaataaaggctaaagtgc-acttttcccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||||||| | |||| |||||||| ||||||||| |||  ||||||||||||||    
T  47869968 aataaaataaaggctaaagtgcaatttttgccccctatatttcaaaatgttgtgattttggcccccta 47869901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 1688222 - 1688188
Alignment:
Q  111 ggacatggattgtcctatatagtttagtagaagac 145  Q
    |||||||||||||||||||||||||||||||||||    
T  1688222 ggacatggattgtcctatatagtttagtagaagac 1688188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 3927664 - 3927742
Alignment:
Q  204 aaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||||| ||| |||| ||||| |||| |||||||||||| | |||  ||||| ||||||||    
T  3927664 aaggctaaagtgcacttttccccctctaacttttaaaatgttgcgattttggccccccatgtatgaaaactacaatttt 3927742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 15058817 - 15058873
Alignment:
Q  203 aaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    ||||||||||||||||||||  |||||||| ||||||||| |||| |||||||||||    
T  15058817 aaaggctaaagtgcacttttggccccctatgtttcaaaatgttgcgattttggcccc 15058873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 35934347 - 35934402
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagta 265  Q
    |||||||||||||| ||||||| ||||||||| |||| |||||||| ||||||||||    
T  35934347 taaagtgcactttt-ccccctaactttcaaaaacttgtaattttggtcccctaagta 35934402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 35935631 - 35935539
Alignment:
Q  209 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    ||||||||||||| ||||||| | |||| ||||  |||||||||| |||||||||||||  |||| ||||||||  |||||||||| ||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcc 35935539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 52491709 - 52491606
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||| |||||||| |||| | ||||||||| ||||||||||||| || |||| |||  |||| ||||||||  |||||||| | ||||||||     
T  52491709 aggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagcccca 52491610  T
Q  303 ttgc 306  Q
    ||||    
T  52491609 ttgc 52491606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 1964542 - 1964440
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||||||||||| |||| | |||| ||||  || |||||||||||||||| | || ||||| ||||||||   ||| ||||||||| ||||||    
T  1964542 ggctaaagtgcacttttccacccttaacttttaaaaagttacaattttggccccctatgaacaaaaactacaattttggtcccttaagaattatcccctt 1964443  T
Q  304 tgc 306  Q
    |||    
T  1964442 tgc 1964440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Original strand, 14869003 - 14869033
Alignment:
Q  302 tttgctctattttgactcagtcaatgatgat 332  Q
    |||||||||||||||||||||||||||||||    
T  14869003 tttgctctattttgactcagtcaatgatgat 14869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Complemental strand, 14876931 - 14876901
Alignment:
Q  302 tttgctctattttgactcagtcaatgatgat 332  Q
    |||||||||||||||||||||||||||||||    
T  14876931 tttgctctattttgactcagtcaatgatgat 14876901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 21177996 - 21178098
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||| ||||| |||||||| |||||| ||  |||||||||||  |||||| | || ||||| ||||||||  |||||||| | ||||||| ||    
T  21177996 aggctaaagtgtactttccccccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttt 21178095  T
Q  304 tgc 306  Q
    |||    
T  21178096 tgc 21178098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 4357552 - 4357499
Alignment:
Q  209 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  4357552 taaagtgcacttttcgccccctatatttcaaaatgttgcgattttgacccccta 4357499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 13826419 - 13826476
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||| |||||| |||||||    
T  13826419 aggctaaagtgcacttttcgccccctatgtttaaaaatgttgcgattttgacccccta 13826476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 21539183 - 21539070
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    ||||||| ||||| |||||  ||||||||| |||| |  ||| |||| ||||||||||||||| |||||||   ||||| ||||||||  ||||||||||    
T  21539183 aataaaaaaaaggttaaagcacacttttccacccttaatttttaaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaaga 21539084  T
Q  293 attagcccctttgc 306  Q
     ||||| |||||||    
T  21539083 tttagctcctttgc 21539070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 43793630 - 43793687
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  43793630 aggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggcccccta 43793687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 13394536 - 13394592
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||| |||||||| ||| ||||| |||| ||||| ||||||||    
T  13394536 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagcccccta 13394592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 13397675 - 13397731
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||| |||||||| ||| ||||| |||| ||||| ||||||||    
T  13397675 ggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttagcccccta 13397731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 13397987 - 13397923
Alignment:
Q  198 aaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||| ||||||||| | |||||||| ||| |||  ||||||||| |||||||||||||||||||    
T  13397987 aaaattaaggctaaacttcacttttcgccctctaagtttcaaaatattgcaattttggcccccta 13397923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 281
Target Start/End: Complemental strand, 37728662 - 37728590
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||| |||| || |||| |||| ||||  |||||||||||||| |||| |||| ||||| ||||||||    
T  37728662 taaagtgcattttttcctcctaacttttaaaaagttgcaattttggcctcctatgtacaaaaactacaatttt 37728590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 3e-42; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 5029784 - 5029681
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaa-ttttcccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |    
T  5029784 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccat 5029685  T
Q  304 tgct 307  Q
    ||||    
T  5029684 tgct 5029681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 5001189 - 5001282
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccc 287  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5001189 aataaaaaataggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttccccccc 5001282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 306
Target Start/End: Complemental strand, 47610690 - 47610579
Alignment:
Q  197 taaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaat 294  Q
    ||||||| ||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  47610690 taaaatataggttaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatt 47610591  T
Q  295 tagcccctttgc 306  Q
    ||||||| ||||    
T  47610590 tagccccattgc 47610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 51469972 - 51470074
Alignment:
Q  206 ggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctt 303  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||| |    
T  51469972 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 51470071  T
Q  304 tgc 306  Q
    |||    
T  51470072 tgc 51470074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 22776924 - 22776811
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    ||||||||| |||||||||||||||||||| |||||| |||||| ||  ||||||||||||||||||| |||| ||||| ||||||||  ||||||||||    
T  22776924 aataaaatataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaaga 22776825  T
Q  293 attagcccctttgc 306  Q
    ||||||||||||||    
T  22776824 attagcccctttgc 22776811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 47609696 - 47609799
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    |||||||| ||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| ||||||||     
T  47609696 aggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagcccca 47609795  T
Q  303 ttgc 306  Q
    ||||    
T  47609796 ttgc 47609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 54540894 - 54540789
Alignment:
Q  203 aaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||| ||||||| ||||| ||||||||  |||||||||| |||||||    
T  54540894 aaaggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagccc 54540795  T
Q  301 ctttgc 306  Q
    ||||||    
T  54540794 ctttgc 54540789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 196 - 306
Target Start/End: Complemental strand, 12703610 - 12703499
Alignment:
Q  196 ataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaat 294  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||  ||| |||||||||||||||||||| ||||| ||||||||  ||||||| || |    
T  12703610 ataaaataaaggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatt 12703511  T
Q  295 tagcccctttgc 306  Q
    ||||||| ||||    
T  12703510 tagccccattgc 12703499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 47614185 - 47614287
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||  |||||||||| |||||| |||    
T  47614185 ggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcctctt 47614284  T
Q  304 tgc 306  Q
    |||    
T  47614285 tgc 47614287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 12700174 - 12700249
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  12700174 aggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaatttt 12700249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 209 - 299
Target Start/End: Original strand, 7267647 - 7267738
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    ||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||  |||| ||||||||  |||||||||| ||||||    
T  7267647 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 29931225 - 29931328
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||| ||| ||||| ||||||||  |||||||||| ||| |||||    
T  29931225 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccct 29931324  T
Q  303 ttgc 306  Q
    ||||    
T  29931325 ttgc 29931328  T

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Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 29980379 - 29980482
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||| ||||||||| ||| ||||| ||||||||  |||||||||| ||| |||||    
T  29980379 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccct 29980478  T
Q  303 ttgc 306  Q
    ||||    
T  29980479 ttgc 29980482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 51470556 - 51470481
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||||||||||||| |||||||||| ||||||||| |||||||||| |  |||||||||||||||||||||||||    
T  51470556 aggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaattt 51470481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 305
Target Start/End: Original strand, 7758401 - 7758503
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaa-ttttcccccctaagaattagcccct 302  Q
    |||||||||||||||||| |||||| | ||||||||| |||||||||||| |||||||||||| ||||| |||| |||| |||||||||| ||| |||||    
T  7758401 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccct 7758500  T
Q  303 ttg 305  Q
    |||    
T  7758501 ttg 7758503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 29932810 - 29932698
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    |||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||  |||| |||||    
T  29932810 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgaccccttaaga 29932712  T
Q  293 attagcccctttgc 306  Q
     |||| ||||||||    
T  29932711 tttagtccctttgc 29932698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 29981964 - 29981852
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    |||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||  |||| |||||    
T  29981964 aatagaattaaggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgg-cccctaagtacaaaaactacaattttgaccccttaaga 29981866  T
Q  293 attagcccctttgc 306  Q
     |||| ||||||||    
T  29981865 tttagtccctttgc 29981852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 55192097 - 55191994
Alignment:
Q  204 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccct-aagaattagcccct 302  Q
    |||||||||||| | ||| ||||| || ||||||||| |||||||||||||||| |||||||| ||||| ||||||||  ||||| |||||||| |||||    
T  55192097 aaggctaaagtgtattttccccccttaactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccct 55191998  T
Q  303 ttgc 306  Q
    ||||    
T  55191997 ttgc 55191994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 8456470 - 8456572
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatta 296  Q
    |||| ||| |||||||||||||||| |||||||  |||||||| ||||||||||||| ||||||| ||| ||||| ||||||||  |||||||||| |||    
T  8456470 aaaaaaaaagctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagattta 8456569  T
Q  297 gcc 299  Q
    |||    
T  8456570 gcc 8456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 52840705 - 52840603
Alignment:
Q  206 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||| ||||||| |||||| ||||||||| |||||||||||||| |||||| || |||||| ||||||||  |||||||||| |||||||| |    
T  52840705 ggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagccccat 52840606  T
Q  304 tgc 306  Q
    |||    
T  52840605 tgc 52840603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 19984848 - 19984925
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  19984848 aggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaatttt 19984925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 28262187 - 28262268
Alignment:
Q  200 aataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||| |||||||||||||||||||||||||| |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  28262187 aatataggctaaagtgcacttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 28262268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 51037536 - 51037637
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccccttt 304  Q
    |||||||||||||||||| ||| || |||||||||  ||||||||||| ||| ||| | || ||||| ||||||||  ||||||||||||||||||||||    
T  51037536 ggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagccccttt 51037635  T
Q  305 gc 306  Q
    ||    
T  51037636 gc 51037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 7268924 - 7268868
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagta 265  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  7268924 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagta 7268868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 310
Target Start/End: Original strand, 24516458 - 24516566
Alignment:
Q  204 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||| ||||||||||||| |||||||| |||| |||| |||||||||||||| |||||||||  ||||| ||||||||  |||| ||||| ||||| ||    
T  24516458 aaggccaaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcc 24516557  T
Q  302 tttgctcta 310  Q
    |||||||||    
T  24516558 tttgctcta 24516566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 47615650 - 47615591
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaag 263  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  47615650 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaag 47615591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 52281649 - 52281572
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||||| ||||||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  52281649 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 52281572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 300
Target Start/End: Complemental strand, 535883 - 535787
Alignment:
Q  206 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttc-ccccctaagaattagccc 300  Q
    |||||||||| |||||||| |||||| ||||||||| ||||||||||||| ||| ||||||  ||||| | ||||||| |||||||||| |||||||    
T  535883 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 3328805 - 3328869
Alignment:
Q  198 aaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| || ||||||||||||||||    
T  3328805 aaaataaaggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcccccta 3328869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 54539753 - 54539831
Alignment:
Q  204 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||| |||| | ||||||||| |||||||||||  |||||||| ||| ||||| ||||||||    
T  54539753 aaggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaatttt 54539831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 262
Target Start/End: Complemental strand, 11671442 - 11671385
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaa 262  Q
    |||||||||||||||||| || |||| ||||||||| ||||||||||| |||||||||    
T  11671442 aggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaa 11671385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 22447739 - 22447796
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| |||||||| ||||||||| |||||||||||||||||||    
T  22447739 aggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 22447796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 52276303 - 52276380
Alignment:
Q  205 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||| ||||||||||||||  |||| |||||||||||| | |||  ||||| ||||||||    
T  52276303 aggctaaagtgcacttttccccccctatctttcaaaacgttgcgattttggccccccatgtatgaaaacaacaatttt 52276380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 52839034 - 52839139
Alignment:
Q  203 aaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||||||||||||| ||||||||| ||| ||| |||||  ||| ||||||| ||| |||||||||||||| |||||||| |||| |||| | |||||||    
T  52839034 aaaggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagccc 52839133  T
Q  301 ctttgc 306  Q
    | ||||    
T  52839134 cattgc 52839139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 534498 - 534594
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    |||||||||||||||||| |||| ||| || |||||| |||||||||||| || |||| |||| ||||| ||||||||  |||||||||| ||||||    
T  534498 aggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcc 534594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 27852753 - 27852809
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||| |||||||| ||||||||| |||||||||| ||||||||    
T  27852753 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcaattttagcccccta 27852809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 46721323 - 46721219
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||||||||| ||||||| |||| ||||  |||| |||||  ||||||| |||| ||||| ||||||||   ||||||||| ||||||||    
T  46721323 aaggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccc 46721224  T
Q  302 tttgc 306  Q
    |||||    
T  46721223 tttgc 46721219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 18456165 - 18456088
Alignment:
Q  206 ggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||||  || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  18456165 ggctaaagtgcacttttcccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 18456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 261
Target Start/End: Complemental strand, 20002014 - 20001956
Alignment:
Q  203 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||| |||||||||| ||||||  ||||||||| |||| ||||||||||||||    
T  20002014 aaaggctaaactgcacttttctcccctaagtttcaaaatgttgcgattttggcccccta 20001956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 22775783 - 22775829
Alignment:
Q  213 gtgcacttttcccccctatctttcaaaatcttgcaattttggccccc 259  Q
    |||||||||||||||||| |||||||||  |||||||||||||||||    
T  22775783 gtgcacttttcccccctaactttcaaaaagttgcaattttggccccc 22775829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 22500595 - 22500652
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| ||||||||||  ||||||| ||||||||| |||||||||||||||||||    
T  22500595 aggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggcccccta 22500652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 26628024 - 26628081
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  26628024 aggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 26628081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 28173728 - 28173785
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||||||    
T  28173728 aggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggcccccta 28173785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 28263213 - 28263136
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||| |||||| |||| ||||  |||| |||||||||||| | |||  ||||||||||||||    
T  28263213 aggctaaagtgcacttttccccccctaacttttaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 28263136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 8338940 - 8338996
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  8338940 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 8338996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 28154882 - 28154938
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 28154938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 51038899 - 51038815
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||| |||||||||||||||||||| ||| || |||| ||||  ||||||||||| ||||||| | || ||||| ||||||||    
T  51038899 aaaatataggctaaagtgcacttttccacccttaacttttaaaaagttgcaattttgaccccctatgaacaaaaactacaatttt 51038815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 31645000 - 31645075
Alignment:
Q  232 ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||| ||| ||||||||||||||||||| | ||||| ||||||||  || ||||||| ||||||| |||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgc 31645075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Original strand, 5001320 - 5001350
Alignment:
Q  302 tttgctctattttgactcagtcaatgatgat 332  Q
    |||||||||||||||||||||||||||||||    
T  5001320 tttgctctattttgactcagtcaatgatgat 5001350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 332
Target Start/End: Complemental strand, 5029669 - 5029639
Alignment:
Q  302 tttgctctattttgactcagtcaatgatgat 332  Q
    |||||||||||||||||||||||||||||||    
T  5029669 tttgctctattttgactcagtcaatgatgat 5029639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 18442626 - 18442707
Alignment:
Q  202 taaaggctaaagtgcacttt--tcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||   |||||||| |||||||||  |||| |||||||||||| | |||  ||||| ||||||||    
T  18442626 taaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaatttt 18442707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 19487700 - 19487781
Alignment:
Q  202 taaaggctaaagtgcacttt--tcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||   |||||||| |||||||||  |||| |||||||||||| | |||  ||||| ||||||||    
T  19487700 taaaggctaaagtgcactttccccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaactacaatttt 19487781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 19986174 - 19986120
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggcccc 258  Q
    |||||||||||||||||||||| || |  |||||||| |||||||||||||||||    
T  19986174 aggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccc 19986120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 258
Target Start/End: Complemental strand, 25179880 - 25179826
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| || ||||||||    
T  25179880 aggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgatattggcccc 25179826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 32960644 - 32960698
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    |||||||| |||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  32960644 aggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggcccc 32960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 279
Target Start/End: Original strand, 49216247 - 49216321
Alignment:
Q  206 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 279  Q
    ||||||||||||||||||| | ||||  ||||||||  ||||||||||| ||||||| |||| ||||| ||||||    
T  49216247 ggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaatt 49216321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 13081199 - 13081142
Alignment:
Q  205 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||| |||||| || ||||| ||||||||| |||| ||||||||||||||    
T  13081199 aggctaaagtgcgcttttcgcctcctatgtttcaaaatgttgcgattttggcccccta 13081142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 34878528 - 34878585
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| ||||||| || |||||||| ||||||||| |||| ||||||||||||||    
T  34878528 aggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggcccccta 34878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 46673044 - 46673101
Alignment:
Q  205 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||||  | ||||| ||||| ||| |||||||||||||||||||    
T  46673044 aggctaaagtgcacttttcgtctcctatgtttcataatgttgcaattttggcccccta 46673101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 4775834 - 4775906
Alignment:
Q  190 atgcaaataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||| |||| |||| ||||| | |||||||| ||| |||  ||||||||| |||||||||||||||||||    
T  4775834 atgcaaagaaaaaaaagactaaactacacttttcaccctctaagtttcaaaatgttgcaattttggcccccta 4775906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 46719941 - 46720017
Alignment:
Q  206 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||| |||||||||| || |||| ||||  |||| |||||||||||||| |||  ||||| ||||||||    
T  46719941 ggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaatttt 46720017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 34174084 - 34174010
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34174084 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 34174010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 127336 - 127431
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagccc 300  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||||| |||||||    
T  127336 aggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttagccccctaagatttagccc 127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 205 - 300
Target Start/End: Complemental strand, 17782655 - 17782558
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagccc 300  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  17782655 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 3227696 - 3227593
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||     
T  3227696 aggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagcccca 3227597  T
Q  303 ttgc 306  Q
    ||||    
T  3227596 ttgc 3227593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 31949321 - 31949424
Alignment:
Q  205 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    ||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||     
T  31949321 aggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 31949420  T
Q  303 ttgc 306  Q
    ||||    
T  31949421 ttgc 31949424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 3227109 - 3227209
Alignment:
Q  207 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctttg 305  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||| |||||||| |||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccattg 3227208  T
Q  306 c 306  Q
    |    
T  3227209 c 3227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 17781663 - 17781763
Alignment:
Q  208 ctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctttg 305  Q
    ||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||| |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  306 c 306  Q
    |    
T  17781763 c 17781763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 47525468 - 47525366
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||| ||||||||||||||  ||||||||||| |||||||| |    
T  47525468 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagccccat 47525369  T
Q  304 tgc 306  Q
    |||    
T  47525368 tgc 47525366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 7501954 - 7501851
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||  |||| |||||  ||||||||    
T  7501954 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccct 7501855  T
Q  303 ttgc 306  Q
    ||||    
T  7501854 ttgc 7501851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 31949904 - 31949801
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    ||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||  | ||||||||| ||||||||     
T  31949904 aggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagcccca 31949805  T
Q  303 ttgc 306  Q
    ||||    
T  31949804 ttgc 31949801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 7500452 - 7500556
Alignment:
Q  203 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||||||||||||||||||||||| || ||||||||| ||||||||||||  || |||||||   |||||||||||||  |||||||||| ||||||||    
T  7500452 aaaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagcccc 7500551  T
Q  302 tttgc 306  Q
    |||||    
T  7500552 tttgc 7500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 219 - 305
Target Start/End: Complemental strand, 18372544 - 18372457
Alignment:
Q  219 ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttg 305  Q
    ||||||||||||  |||||||| ||||||||||||||||||||||||| ||||| ||||||||  |||||||||| ||||||||||||    
T  18372544 ttttcccccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttg 18372457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 213 - 279
Target Start/End: Original strand, 47524532 - 47524599
Alignment:
Q  213 gtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 279  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatt 47524599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 18371424 - 18371518
Alignment:
Q  206 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagc 298  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||  |||||||||| |||||    
T  18371424 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagc 18371518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 128705 - 128600
Alignment:
Q  203 aaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagccc 300  Q
    ||||| ||||||||||||||||| || || |||||||||  ||||||||||| ||||||||||||||||||||||||||  ||||||||||| | |||||    
T  128705 aaaggttaaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccc 128606  T
Q  301 ctttgc 306  Q
    | ||||    
T  128605 cattgc 128600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 31659622 - 31659725
Alignment:
Q  206 ggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||  |||||||| ||||||||| ||| |||||||| |||||||||||| ||||| ||||||||  |||||||||| ||||||||     
T  31659622 ggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 31659721  T
Q  303 ttgc 306  Q
    ||||    
T  31659722 ttgc 31659725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 8527109 - 8527042
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  8527109 aataaaataaaggctaaagtgcacttttcgccccctatatttcaaaatgttgcgattttggcccccta 8527042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 305
Target Start/End: Complemental strand, 22630554 - 22630452
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||| || || ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||  |||||||||| | |||| ||    
T  22630554 aggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctct 22630455  T
Q  303 ttg 305  Q
    |||    
T  22630454 ttg 22630452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 305
Target Start/End: Original strand, 11658372 - 11658480
Alignment:
Q  199 aaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccct-aagaatta 296  Q
    ||||| |||||||| ||||||||||||||| || ||||||||| | ||||||||| |||||||| |||| ||||| ||||||||   |||| ||||||||    
T  11658372 aaatataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaatta 11658471  T
Q  297 gcccctttg 305  Q
    |||||||||    
T  11658472 gcccctttg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 306
Target Start/End: Complemental strand, 14999249 - 14999154
Alignment:
Q  211 aagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||||  |||||||| |||||||||||| |||||||| ||| ||||| ||||||||  | |||||||| |||||||||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgc 14999154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 20636931 - 20636866
Alignment:
Q  197 taaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  20636931 taaaataaaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 20636866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 20163665 - 20163585
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaa 277  Q
    |||| |||||||||||||||||| ||| |||||| ||||||||| |||||||||||||| ||||| |||| ||||| ||||    
T  20163665 aaaaaaaaggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 42886384 - 42886285
Alignment:
Q  209 taaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||| || |||| |||||||||  ||||||||||| |||||||| ||| ||||| ||||||||  |||||||||| ||||||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 21505415 - 21505516
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||| ||||||| |||||||||  |||| |||||||||||| |  ||| ||||| ||||||||  |||| ||||| ||||||||||    
T  21505415 aggctaaagtgcactttt-ccccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctt 21505513  T
Q  304 tgc 306  Q
    |||    
T  21505514 tgc 21505516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 233 - 306
Target Start/End: Original strand, 22629514 - 22629588
Alignment:
Q  233 tttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttc-ccccctaagaattagcccctttgc 306  Q
    |||||||| |||| |||||||||| ||||||||| ||||| ||||||||  |||||||||| |||||||||||||    
T  22629514 tttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgc 22629588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 11662654 - 11662550
Alignment:
Q  204 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttc-ccccctaagaattagcccc 301  Q
    |||| ||||||||| ||||||||||| | ||||||||| ||||||||||| || | ||| |||| ||||| | ||||||  ||||| |||||||||||||    
T  11662654 aaggttaaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccc 11662555  T
Q  302 tttgc 306  Q
    |||||    
T  11662554 tttgc 11662550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 47369772 - 47369883
Alignment:
Q  197 taaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaat 294  Q
    ||||| |||||||||| |||||||||   |||||| ||||||||| ||||||||||| ||| | ||||||| ||||| | ||||||  |||| ||||| |    
T  47369772 taaaaaaaaggctaaaatgcactttttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatt 47369871  T
Q  295 tagcccctttgc 306  Q
    ||||||||||||    
T  47369872 tagcccctttgc 47369883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 27869194 - 27869252
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| |||||| |||||||    
T  27869194 aaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttgacccccta 27869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 42271638 - 42271580
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||||| |||||||| ||| ||||| |||||||||| ||||||||    
T  42271638 aaggctaaagtgcacttttcgccccctatgttttaaaatgttgcaatttttgcccccta 42271580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 36746806 - 36746751
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||| | |||||||| ||||||| ||| ||||| |||||||||||||||||||    
T  36746806 ggctaaactacacttttcgcccctatgttttaaaatgttgcaattttggcccccta 36746751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 3562431 - 3562489
Alignment:
Q  204 aaggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||| ||||||||||||||| | |||||| ||||||||| |||| ||||||||||||||    
T  3562431 aaggttaaagtgcacttttcgctccctatgtttcaaaatgttgcgattttggcccccta 3562489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 19195212 - 19195270
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||| |||| ||||| |||||||| ||||||||| |||||||||||| ||||||    
T  19195212 aaggctaaactgcatttttcaccccctatgtttcaaaatattgcaattttggtccccta 19195270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 21690415 - 21690469
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcccc 258  Q
    |||||||| | ||||||||  ||||||| ||||||||||||||||||||||||||    
T  21690415 aggctaaactacacttttcgtcccctatgtttcaaaatcttgcaattttggcccc 21690469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 14998007 - 14998067
Alignment:
Q  205 aggctaaagtgcac--ttttcccccctatctttcaaaatcttgcaattttggccccctaag 263  Q
    ||||||||||||||  ||||  |||||| ||||||||| ||| ||||||||||||||||||    
T  14998007 aggctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggccccctaag 14998067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 24597516 - 24597573
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| || ||||| ||||||||| |||  ||||||||||||||    
T  24597516 aggctaaagtgcacttttcgcctcctatgtttcaaaatgttgtgattttggcccccta 24597573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 260
Target Start/End: Complemental strand, 5490980 - 5490924
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccct 260  Q
    ||||| || |||||||||| |||||||| ||||||||  ||||||||||||||||||    
T  5490980 aggcttaaatgcacttttcaccccctatgtttcaaaaagttgcaattttggccccct 5490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 21224353 - 21224409
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||| ||||| ||| ||| ||||||||| |||||||||||| ||||||    
T  21224353 aggctaaactgcatttttcgcccttatgtttcaaaatgttgcaattttggtccccta 21224409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 261
Target Start/End: Complemental strand, 39182245 - 39182181
Alignment:
Q  198 aaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||| |||||||||| |||||||||| |||||||  ||| ||||| ||||||||||| |||||||    
T  39182245 aaaaaaaaggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgacccccta 39182181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 52827336 - 52827449
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaaga 292  Q
    ||||||| |||||||||||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||    
T  52827336 aataaaaaaaaggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaaga 52827435  T
Q  293 attagcccctttgc 306  Q
     |||||||| ||||    
T  52827436 tttagccccattgc 52827449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 41364829 - 41364930
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagccccttt 304  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||| ||    
T  41364829 ggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagccccatt 41364928  T
Q  305 gc 306  Q
    ||    
T  41364929 gc 41364930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 45150068 - 45149969
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt--cccccctaagaattagcccctttgc 306  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||  ||||||||||| |||||||||||||    
T  45150068 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgc 45149969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 144 - 205
Target Start/End: Complemental strand, 26372033 - 26371972
Alignment:
Q  144 acaatttaatttctcccatatattagagtcacatgcaatagaatgcatgcaaataaaataaa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26372033 acaatttaatttctcccatatattagagtcacatgcaatagaatgcatgcaaataaaataaa 26371972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 41366239 - 41366130
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaatta 296  Q
    ||||||||||||||||||||||||||||| |||| ||||||||| | ||||||||| ||||| |||||| ||||||||||||||  |||||||||| |||    
T  41366239 aaaataaaggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttagccccctaagattta 41366140  T
Q  297 gcccctttgc 306  Q
    ||||| ||||    
T  41366139 gccccattgc 41366130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 52828168 - 52828069
Alignment:
Q  209 taaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||| |||  |||||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||| ||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 52828069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 39699867 - 39699766
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccccttt 304  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||  |||| ||||||||  |||||||||| |||||||| ||    
T  39699867 ggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagccccatt 39699768  T
Q  305 gc 306  Q
    ||    
T  39699767 gc 39699766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 14999284 - 14999360
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  14999284 aggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 14999360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 24422799 - 24422902
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||| |||||| | ||||||||| |||||||||||| |||||||||||| ||||| ||||||||  |||||||||| ||||||||     
T  24422799 aggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagcccca 24422898  T
Q  303 ttgc 306  Q
    ||||    
T  24422899 ttgc 24422902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 45157313 - 45157234
Alignment:
Q  202 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||||||||||||| |||| ||||| ||||||||    
T  45157313 taaaggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaatttt 45157234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 7983053 - 7983151
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||| ||| || ||||||| | |||||||||||||||||||| ||| ||||||||||||||| ||||||||||| ||| |||| ||||    
T  7983053 taaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgc 7983151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 35594208 - 35594317
Alignment:
Q  197 taaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaatt 295  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||| ||||||||||| | ||||||||||  ||||| ||||||||  ||||||| | ||    
T  35594208 taaattaaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttt-gacccctaagtattaaaactacaattttgacccctaaaattt 35594306  T
Q  296 agcccctttgc 306  Q
    |||||||||||    
T  35594307 agcccctttgc 35594317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 52274966 - 52275044
Alignment:
Q  204 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||||| ||||| ||||||||    
T  52274966 aaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttt 52275044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 37526986 - 37526877
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaatta 296  Q
    ||||| |||| ||||||| ||||||||||||| | ||||||||| |||||||||||||| |||||| ||   |||||||||||||  ||||||||| |||    
T  37526986 aaaattaaggttaaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccctaagattta 37526887  T
Q  297 gcccctttgc 306  Q
    ||||||||||    
T  37526886 gcccctttgc 37526877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 51684355 - 51684468
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    |||||||| | ||||||||||||||||||||||| || |||| ||||  ||||||||||||||||||| |||  ||||| ||||||||  ||||||||||    
T  51684355 aataaaatcatggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaaga 51684454  T
Q  293 attagcccctttgc 306  Q
     |||||||||||||    
T  51684455 tttagcccctttgc 51684468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 24426178 - 24426074
Alignment:
Q  204 aaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||   ||||||||| ||||||||    
T  24426178 aaggttaaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagcccc 24426079  T
Q  302 tttgc 306  Q
     ||||    
T  24426078 attgc 24426074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 51685867 - 51685764
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| |||||||||  |||| |||||||||| ||| |||| ||||| ||||||||  |||||||||| |||||||||    
T  51685867 aggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccct 51685768  T
Q  303 ttgc 306  Q
    ||||    
T  51685767 ttgc 51685764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 36614005 - 36613903
Alignment:
Q  206 ggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||| |||||| |||||| |||| |||| |||| |||||||||||||||||||| ||||| ||||||||  |||||||||| |||||| |||    
T  36614005 ggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaagatttagcctctt 36613906  T
Q  304 tgc 306  Q
    |||    
T  36613905 tgc 36613903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 45148581 - 45148682
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||||||||| ||| || | ||||||||| ||||||||||||||||||||||||  ||||| |||||||| ||||||||||| ||| ||||||    
T  45148581 ggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccctt 45148679  T
Q  304 tgc 306  Q
    |||    
T  45148680 tgc 45148682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 33088721 - 33088616
Alignment:
Q  203 aaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||||||||||||||||||||| | ||| | ||||||| |||||||||||| |||  ||||||| ||||| |||||||| || |||||||| |||||||    
T  33088721 aaaggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagccc 33088622  T
Q  301 ctttgc 306  Q
    ||||||    
T  33088621 ctttgc 33088616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 304
Target Start/End: Original strand, 43058789 - 43058885
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccccttt 304  Q
    |||||| ||||||| ||||||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||  ||| |||||| |||||||||||    
T  43058789 taaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagccccttt 43058885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 23980568 - 23980465
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| |||| |||| |||||||||||||| |||||||||| ||||| | ||||||   | ||||||| |||||||||    
T  23980568 aggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccct 23980469  T
Q  303 ttgc 306  Q
    ||||    
T  23980468 ttgc 23980465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 11437301 - 11437224
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||| |||||| | ||||||||| ||||||||||||| ||| ||||||| ||||| ||||||||    
T  11437301 aggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaatttt 11437224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 50680319 - 50680433
Alignment:
Q  191 tgcaaataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-ccccccta 289  Q
    |||||||||||||  || ||||||||| ||||||||| || ||| ||||| ||||||||||||||||||||||||  ||||| | ||||||   ||||||    
T  50680319 tgcaaataaaata--ggttaaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtccccta 50680416  T
Q  290 agaattagcccctttgc 306  Q
    ||| ||| |||||||||    
T  50680417 agatttaacccctttgc 50680433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 7674527 - 7674602
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||| ||||||||||||| |||| |||| |||||||||||||  |||||||||| ||||| ||||||||    
T  7674527 aggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgg-gccctaagtacaaaaactacaatttt 7674602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 306
Target Start/End: Original strand, 11436032 - 11436144
Alignment:
Q  196 ataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaa 293  Q
    |||||| |||||||||||||||||||||||||  || ||||||||| |||||||||||||||   ||||||  ||||| ||||||||  ||||||||||     
T  11436032 ataaaaaaaaggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagat 11436131  T
Q  294 ttagcccctttgc 306  Q
    ||| ||| |||||    
T  11436132 ttaacccatttgc 11436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 35067104 - 35067001
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||||||||| ||  ||||||||  |||| |||||||||||||| | || ||||| ||||||||  |||||||| | |||||||||    
T  35067104 aggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccct 35067005  T
Q  303 ttgc 306  Q
    ||||    
T  35067004 ttgc 35067001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 39222575 - 39222501
Alignment:
Q  206 ggctaaagtgcacttttcccccctat--ctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaat 278  Q
    ||||||||||||||||| |||||| |  ||||||||| ||||||||||||||||||||||||  ||||| |||||    
T  39222575 ggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaat 39222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 4059520 - 4059578
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  4059520 aaggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggcccccta 4059578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 39698555 - 39698657
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaatta 296  Q
    |||| ||||||||||||||||||| ||||||| | |||| |||| ||| |||||||||||||||||||||  |||| | ||||||  || |||||| |||    
T  39698555 aaaaaaaaggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggccactaagattta 39698654  T
Q  297 gcc 299  Q
    |||    
T  39698655 gcc 39698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 39153220 - 39153115
Alignment:
Q  203 aaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||| |||||||||||||| |||||| |  |||||||| ||||||||||||||||| || |||| ||||| ||||||||  ||| |||||| ||| |||    
T  39153220 aaaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaaccc 39153121  T
Q  301 ctttgc 306  Q
    ||||||    
T  39153120 ctttgc 39153115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 43378817 - 43378712
Alignment:
Q  202 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    |||||| ||||||||||||||| | | || ||||||||| ||| ||||||||  ||||||||||| ||||  ||||||||  || ||||||| ||||| |    
T  43378817 taaaggttaaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcac 43378718  T
Q  301 ctttgc 306  Q
    ||||||    
T  43378717 ctttgc 43378712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 46432215 - 46432272
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||||| ||| |||| ||||||||||||||    
T  46432215 aggctaaagtgcacttttcgccccctatgtttcataatgttgcgattttggcccccta 46432272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 35595295 - 35595191
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatctt-gcaattttggccccctaagtaccaaaacca-caattttcccccctaagaattagcccc 301  Q
    ||||||||||| ||||||||||| ||| |||| |||| ||| ||||||||| ||||||| |||  ||||| | |||||||  ||||||||| ||||||||    
T  35595295 aggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccctaagatttagcccc 35595196  T
Q  302 tttgc 306  Q
    |||||    
T  35595195 tttgc 35595191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 36612851 - 36612954
Alignment:
Q  204 aaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||| |||||||||| || |||||||||  ||||||||||||   | ||||||| ||||| ||||||||  |||||||||| |||| |||    
T  36612851 aaggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttgg-atcttaagtacaaaaactacaattttaaccccctaagatttagtccc 36612949  T
Q  302 tttgc 306  Q
    |||||    
T  36612950 tttgc 36612954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 24750075 - 24750020
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    ||||||||| |||||||||| |||||||| ||| ||||| ||||||||||||||||    
T  24750075 aaggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccc 24750020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 44404439 - 44404518
Alignment:
Q  203 aaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||| ||||||||| ||| | || ||||||||| || |||||||| ||||||||||||| ||||| | ||||||    
T  44404439 aaaggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataatttt 44404518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 48471864 - 48471919
Alignment:
Q  207 gctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||  ||||||| ||||||||| |||| ||||||||||||||    
T  48471864 gctaaagtgcacttttcgtcccctatgtttcaaaatgttgcgattttggcccccta 48471919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 7675560 - 7675458
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||| ||||| | ||  || ||||||||| |||||||||||| || ||||||||  ||||  | ||||||  |||||||||| ||||||||||    
T  7675560 aggctaaagtgtactttccacctttaactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctt 7675461  T
Q  304 tgc 306  Q
    |||    
T  7675460 tgc 7675458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 281
Target Start/End: Original strand, 39151945 - 39152007
Alignment:
Q  219 ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||| ||  |||||||| |||| ||||||||||||||| |||| ||||| ||||||||    
T  39151945 ttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaatttt 39152007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 51719122 - 51719179
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| ||| |||| ||||| ||| |||||||||||||||||||    
T  51719122 aggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggcccccta 51719179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 15000059 - 14999995
Alignment:
Q  203 aaaggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtac 266  Q
    |||||||||||| ||||||| || ||||| |||| |||| ||||||||||||  |||||||||||    
T  15000059 aaaggctaaagttcactttttcctccctaacttttaaaaacttgcaattttgatcccctaagtac 14999995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 24962257 - 24962201
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||| || ||||||| |||||||| ||||||||| ||||| |||||||||||||    
T  24962257 ggctaaactgtacttttcgccccctatgtttcaaaatgttgcagttttggcccccta 24962201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 272
Target Start/End: Complemental strand, 52276261 - 52276197
Alignment:
Q  209 taaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaac 272  Q
    ||||||||||||| ||||  ||| |||||||||  ||| |||||||||||||||||||| |||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaac 52276197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 6e-31; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 30338535 - 30338459
Alignment:
Q  17 ttccctcttctatcttctccatatatataggggaaagacttccaattaccaattgacgaaaatacccctataagggc 93  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30338535 ttcccttttctatcttctccatatatataagggaaagacttccaattaccaattgacgaaaatacccctataagggc 30338459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 5513981 - 5514083
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||| ||||| |||||||| ||||||||| | ||||||||||    
T  5513981 aggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagcccctt 5514080  T
Q  304 tgc 306  Q
    |||    
T  5514081 tgc 5514083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 10006344 - 10006446
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||| ||||||||  |||||||||| ||||||||||    
T  10006344 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcccctt 10006443  T
Q  304 tgc 306  Q
    |||    
T  10006444 tgc 10006446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 199 - 306
Target Start/End: Complemental strand, 12353467 - 12353360
Alignment:
Q  199 aaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattag 297  Q
    ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| |||||| | ||||||  |||||||||| ||||    
T  12353467 aaataaaggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagta-caaaactataattttggccccctaagatttag 12353369  T
Q  298 cccctttgc 306  Q
    |||| ||||    
T  12353368 ccccattgc 12353360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 22221470 - 22221365
Alignment:
Q  201 ataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagc 298  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||  |||||||||| |||||    
T  22221470 ataaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagc 22221371  T
Q  299 cccttt 304  Q
    ||||||    
T  22221370 cccttt 22221365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 304
Target Start/End: Complemental strand, 22227812 - 22227707
Alignment:
Q  201 ataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagc 298  Q
    |||||||||||||||||||||||| |||||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||  |||||||||| |||||    
T  22227812 ataaaggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagc 22227713  T
Q  299 cccttt 304  Q
    ||||||    
T  22227712 cccttt 22227707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 18978029 - 18978121
Alignment:
Q  215 gcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||  |||| ||||| |||||||||||||    
T  18978029 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgc 18978121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 10007865 - 10007762
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||   |||||||||||||   ||||||||| |||||||||    
T  10007865 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccct 10007766  T
Q  303 ttgc 306  Q
    ||||    
T  10007765 ttgc 10007762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 18970920 - 18971012
Alignment:
Q  215 gcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccct-aagaattagcccctttgc 306  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||  ||||| |||| ||| |||||||||    
T  18970920 gcacttttcccccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgc 18971012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 24488762 - 24488679
Alignment:
Q  223 cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagcccctttgc 306  Q
    |||||||| ||||||||| ||||||||||||||||||||| || |||||| |||||||| |||| ||||| |||||||| ||||    
T  24488762 cccccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttgccccgtaagatttagccccattgc 24488679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 29968434 - 29968364
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 279  Q
    ||||||||||||||||||| || |||| |||| ||||||||||||||||||||||||| ||||| ||||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaatt 29968364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 32207435 - 32207350
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||| ||||||||||||||||||| |||||||| | ||||||| |||||||||||| | |||||||||| ||||| ||||||||    
T  32207435 aataaaaaaaaggctaaagtgcacttt-cccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaatttt 32207350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 5003199 - 5003103
Alignment:
Q  204 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtac-caaaaccacaattttcccccctaagaattagccc 300  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||   |||||||||||  ||||||||||||||  ||||||||| |||||||    
T  5003199 aaggctaaagcgcacttt-cccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccctaagatttagccc 5003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 8388462 - 8388564
Alignment:
Q  204 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||| |||||||| |||| ||||  |||||||||| |||||||| |||| ||||| | ||||||  |||||||||| |||||||||    
T  8388462 aaggctaaagtgcacttt-cccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccct 8388560  T
Q  303 ttgc 306  Q
    ||||    
T  8388561 ttgc 8388564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 1824174 - 1824084
Alignment:
Q  211 aagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    ||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||  |||||||||| ||||||    
T  1824174 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1824084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 299
Target Start/End: Complemental strand, 1858619 - 1858529
Alignment:
Q  211 aagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    ||||||| ||||||||| ||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||||||  |||||||||| ||||||    
T  1858619 aagtgcatttttccccctctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagcc 1858529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 12351919 - 12352016
Alignment:
Q  204 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    |||||||||||||| ||| ||||||| | |||||||||  ||||||||||| |||||||||||| ||||| ||||||||  |||||||||| ||||||    
T  12351919 aaggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcc 12352016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 24122882 - 24122958
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||| |||||||||||| |||| ||||  ||||||||||| |||||||||||| ||||| | ||||||    
T  24122882 aggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataatttt 24122958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 30335637 - 30335741
Alignment:
Q  204 aaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||| |||||| |||| | |||| |||| |||||||||||||| | |||||||| ||||  ||||||||  |||||||||| ||||||||    
T  30335637 aaggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccc 30335736  T
Q  302 tttgc 306  Q
    |||||    
T  30335737 tttgc 30335741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 38980153 - 38980069
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||| |||||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  38980153 aaaaaaaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 38980069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 39011250 - 39011166
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||| |||||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  39011250 aaaaaaaaggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 39011166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 11287779 - 11287878
Alignment:
Q  209 taaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    |||||||||||||| | |||||| |||| |||| |||||||||||||||| ||||||||  |||| ||||||||  |||||||||||||| | |||||||    
T  11287779 taaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcctttgc 11287878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 18979220 - 18979145
Alignment:
Q  207 gctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||| || ||||||| | ||||||||||||||||||||| ||  ||||| ||||||||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaatttt 18979145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 22220388 - 22220490
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||| ||| |||| |||  |||||||||||| ||||||| |||  ||||| ||||||||  |||||||||| ||||||| ||    
T  22220388 ggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagcccatt 22220487  T
Q  304 tgc 306  Q
    |||    
T  22220488 tgc 22220490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 24483143 - 24483200
Alignment:
Q  206 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaa 262  Q
    ||||||||||||||||||||| ||||  |||||||| |||||||||||||||||||||    
T  24483143 ggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggccccctaa 24483200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 32968455 - 32968532
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  32968455 aggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 32968532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 1823547 - 1823627
Alignment:
Q  201 ataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||||||||||||| |||||| |||||| | |||| |||| |||||||||||| ||| |||||||| ||||| |||||||    
T  1823547 ataaaggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1823627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 201 - 280
Target Start/End: Original strand, 1857992 - 1858072
Alignment:
Q  201 ataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||||||||||||| |||||| |||||| | |||| |||| |||||||||||| ||| |||||||| ||||| |||||||    
T  1857992 ataaaggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattt 1858072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 19391387 - 19391443
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| ||||||| ||||||||| |||||||||||| ||||||    
T  19391387 aggctaaactgcacttttcgcccctatgtttcaaaatgttgcaattttggtccccta 19391443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 32974037 - 32973961
Alignment:
Q  206 ggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||| |||||||| |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  32974037 ggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 32973961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 38974795 - 38974871
Alignment:
Q  206 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  38974795 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 38974871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 281
Target Start/End: Original strand, 39005893 - 39005969
Alignment:
Q  206 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  39005893 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 39005969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 24123997 - 24123897
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||| |||||  ||||| || ||||||||| ||||||||||||||| | ||||||| ||||  ||||||||  || ||||||| ||||||||||    
T  24123997 aggctaaagtacactt--cccccgtaactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctt 24123900  T
Q  304 tgc 306  Q
    |||    
T  24123899 tgc 24123897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 5192270 - 5192328
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  5192270 aaggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggcccccta 5192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 4518868 - 4518925
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  4518868 aggctaaagtgcacttttcgccccctatattttaaaatattgcgattttggcccccta 4518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 4807599 - 4807656
Alignment:
Q  205 aggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| || ||||| ||||||||| |||||||||||||||||||    
T  4807599 aggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggcccccta 4807656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 11456637 - 11456694
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||  ||||||||  |||||||||||||||||||    
T  11456637 aggctaaagtgcacttttctccccctaattttcaaaaatttgcaattttggcccccta 11456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaa 271  Q
    |||||||||||| ||||||||||||  |||||||| ||||||||||||  ||||||||||| ||||    
T  23170098 ggctaaagtgca-ttttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 44147275 - 44147218
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||| ||| ||||||||| |||| ||||||||||||||    
T  44147275 aggctaaagtgcacttttcgccccatatgtttcaaaatattgcgattttggcccccta 44147218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 3819489 - 3819541
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccc 258  Q
    |||||||||||| ||||||||| ||  ||||||||| ||||||||||||||||    
T  3819489 ggctaaagtgcatttttcccccttaagtttcaaaatgttgcaattttggcccc 3819541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 11288962 - 11288902
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaa-ttttggccccctaag 263  Q
    |||||||||||||||||| | |||||| ||||||||| ||||||| |||||||||||||||    
T  11288962 aggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttttggccccctaag 11288902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 254
Target Start/End: Complemental strand, 45114620 - 45114568
Alignment:
Q  203 aaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttgg 254  Q
    ||||||| |||||||||||||| |||||| ||||||||| |||||||||||||    
T  45114620 aaaggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttgg 45114568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 11282011 - 11282110
Alignment:
Q  209 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    |||||||||||||| |||||| | |||| ||||  |||||||||||||||||||  ||| ||||  ||||||||  |||||||||| ||| |||||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 141
Target Start/End: Complemental strand, 30338441 - 30338410
Alignment:
Q  110 tggacatggattgtcctatatagtttagtaga 141  Q
    ||||||||||||||||||||||||||||||||    
T  30338441 tggacatggattgtcctatatagtttagtaga 30338410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 5514371 - 5514270
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagccccttt 304  Q
    ||||||||||||||||||  ||||||  ||| |||| ||||||||||| |||  |||| ||| ||||| ||||||||  || |||| | ||||||| |||    
T  5514371 aggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttgacctctaaaatttagcccattt 5514272  T
Q  305 gc 306  Q
    ||    
T  5514271 gc 5514270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 33895678 - 33895621
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| |||||||| ||| ||||| |||||||||||| ||||||    
T  33895678 aggctaaactgcacttttcgccccctatattttaaaatgttgcaattttggtccccta 33895621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 36249547 - 36249608
Alignment:
Q  201 ataaaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggcccccta 261  Q
    |||| ||||||||||||||||||||||| ||  ||||||||  |||||||||||||| ||||    
T  36249547 ataatggctaaagtgcacttttccccccttaagtttcaaaaagttgcaattttggcctccta 36249608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 36449769 - 36449880
Alignment:
Q  197 taaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaat 294  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||| |||||||| |||||| ||||||    
T  36449769 taaaatataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaat 36449868  T
Q  295 tagcccctttgc 306  Q
    ||| ||||||||    
T  36449869 taggccctttgc 36449880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 38840605 - 38840492
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    ||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||  ||||||||||    
T  38840605 aataaaaaataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaaga 38840506  T
Q  293 attagcccctttgc 306  Q
     |||||||| ||||    
T  38840505 tttagccccattgc 38840492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 206 - 299
Target Start/End: Complemental strand, 1034570 - 1034475
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcc 299  Q
    |||||||||||||||||||||||| | ||||||||| | |||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 28617926 - 28618023
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagcccctttgc 306  Q
    |||||| || |||| | ||||| |||||||||||||||||||||||||||| |||||| |||||  ||||||| |||||||||| |||||||||||||    
T  28617926 taaagtacattttttctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccctaagatttagcccctttgc 28618023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 22848189 - 22848293
Alignment:
Q  204 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||||||||||| ||||||| ||| ||||| ||||||||  | |||||||| ||||||||    
T  22848189 aaggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccc 22848288  T
Q  302 tttgc 306  Q
    |||||    
T  22848289 tttgc 22848293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 7899984 - 7899886
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||  |||| ||||||||  |||||||||| ||||||||    
T  7899984 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 18906089 - 18905995
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagc 298  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||  ||||||||| |||||    
T  18906089 aggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccctaagatttagc 18905995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 304
Target Start/End: Original strand, 18904366 - 18904467
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||| | ||||||||| | ||||||||||||||| ||||||| ||||| ||||||||    ||||||||||||||||||    
T  18904366 aggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccct 18904465  T
Q  303 tt 304  Q
    ||    
T  18904466 tt 18904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 281
Target Start/End: Complemental strand, 802695 - 802616
Alignment:
Q  202 taaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||  |||| ||||| ||||||||    
T  802695 taaaggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaatttt 802616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 36451018 - 36450920
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||  |||| |||||||   ||||| |||||||||| |||||||    
T  36451018 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgc 36450920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 11258915 - 11258810
Alignment:
Q  203 aaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||||||||||||| ||| ||| | ||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||   ||||||||| |||||||    
T  11258915 aaaggctaaagtgcattttcccctctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccc 11258816  T
Q  301 ctttgc 306  Q
    | ||||    
T  11258815 cattgc 11258810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 18797245 - 18797349
Alignment:
Q  205 aggctaaagtgcacttttcc--cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||||||||||||||||||  |||||| ||||||||| |||||||||||| |||| ||||||  ||||| ||||||||  |||||||| | ||||||||    
T  18797245 aggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccc 18797344  T
Q  302 tttgc 306  Q
    |||||    
T  18797345 tttgc 18797349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 18300831 - 18300724
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattag 297  Q
    |||||| | |||||| |||||||||||||| || |||||| || |||||||||||| |||||||||||| ||||| ||||||||  ||||||  | ||||    
T  18300831 aaaatataagctaaattgcacttttccccc-taactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccctataatttag 18300733  T
Q  298 cccctttgc 306  Q
    |||||||||    
T  18300732 cccctttgc 18300724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 298
Target Start/End: Complemental strand, 11938890 - 11938796
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagc 298  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||||| | |||||||| |||||  | |||||| |||||||||||||||||    
T  11938890 aggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagta-caaaaatataattttgcccccctaagaattagc 11938796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 23869636 - 23869534
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||||| |||| | |||| |||| ||||||||||||||||||||| ||| ||||| ||||||||  | |||||||| |||||||||    
T  23869636 aggctaaagtgcacttttccacccttaactttaaaaa-cttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccct 23869538  T
Q  303 ttgc 306  Q
    ||||    
T  23869537 ttgc 23869534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 18868923 - 18869000
Alignment:
Q  205 aggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||| |||||||| |||||| ||||||||| ||||||||||||||| ||||| ||| ||||| ||||||||    
T  18868923 aggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaatttt 18869000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 22588056 - 22587953
Alignment:
Q  204 aaggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||| |||||||| | || ||||||||| ||||||||||||| |||||| |||| ||||| ||||||||  |||| ||||| ||||||||    
T  22588056 aaggctaaagtgcatttttcccctcataactttcaaaaacttgcaattttgg-cccctatgtacaaaaactacaattttggccccttaagatttagcccc 22587958  T
Q  302 tttgc 306  Q
    |||||    
T  22587957 tttgc 22587953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 21837356 - 21837298
Alignment:
Q  204 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaag 263  Q
    ||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||||    
T  21837356 aaggctaaagtgcactttttcccc-taactttcaaaaacttgcaattttggccccctaag 21837298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 38839241 - 38839344
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||| |||| |||||| |  |||||||| ||||||||||| ||||||||| ||| ||||| ||||||||  |||||||||| ||||||||     
T  38839241 aggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagcccca 38839340  T
Q  303 ttgc 306  Q
    ||||    
T  38839341 ttgc 38839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 18299373 - 18299475
Alignment:
Q  206 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||||||||||| ||| || ||||||||| ||| ||||||||||| ||||||||  ||||| ||||||||  ||||||| || ||||||| ||    
T  18299373 ggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagcccttt 18299472  T
Q  304 tgc 306  Q
    |||    
T  18299473 tgc 18299475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 41878092 - 41878196
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatct---tgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||||| ||||| || ||||||||| ||   |||||||||||||||||||||||  |||| ||||||||  |||| ||||| ||||||||    
T  41878092 ggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcccc 41878191  T
Q  302 tttgc 306  Q
     ||||    
T  41878192 attgc 41878196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 41879314 - 41879237
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||| ||||||| |||||| |  |||||||| |||||||||||||||||||||||||  |||| ||||||||    
T  41879314 aggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaatttt 41879237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 1033212 - 1033275
Alignment:
Q  207 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaa 271  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||||| ||||||| ||||||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttgg-cccctaaataccaaaa 1033275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 207 - 298
Target Start/End: Original strand, 13030293 - 13030383
Alignment:
Q  207 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaa-ttttcccccctaagaattagc 298  Q
    ||||||||||||||||||||| || ||||||||| |||| |||||||| ||||||||||| ||||  |||| |||| |||||||||| |||||    
T  13030293 gctaaagtgcacttttccccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttttgccccctaagatttagc 13030383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 32739615 - 32739699
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||||||| | ||||   |||||| ||||||||| ||||||||||||||||| || |||| ||||| ||||||||    
T  32739615 aaaataaaggctaaagtgtattttttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaatttt 32739699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 7898694 - 7898793
Alignment:
Q  209 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||| ||||| | ||||||||| ||||||||||| ||| ||||||||   |||| ||||||||  |||||||||| |||||||| ||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgc 7898793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 13567970 - 13568072
Alignment:
Q  204 aaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccctaagaattagcccct 302  Q
    |||| ||||||| ||||||||||  |||  |||||||| ||||||||||||||||||||| ||| ||||| ||||||||   ||| || |||||||||||    
T  13567970 aaggttaaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttgatccc-aaaaattagcccct 13568068  T
Q  303 ttgc 306  Q
    ||||    
T  13568069 ttgc 13568072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 24475223 - 24475300
Alignment:
Q  204 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||| |||  | |||||| ||||||||| |||| |||||| ||||||||||||  ||||| ||||||||    
T  24475223 aaggctaaagtgcgcttccctcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaatttt 24475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 30714274 - 30714331
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||| ||||| |||| ||||||||||||||    
T  30714274 aggctaaagtgcacttttcgccccctatgttttaaaatgttgcgattttggcccccta 30714331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 9787861 - 9787805
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||| | |||||||| |||||||| ||||||||| |||||||||||||||||||    
T  9787861 ggctaaactacacttttcgccccctatgtttcaaaatattgcaattttggcccccta 9787805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 24476943 - 24476869
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||| ||||||||||| ||||| | |||| |||| |||| |||||||| ||||||||||| ||||| ||||||||    
T  24476943 ggctagagtgcactttttcccccaa-cttttaaaaacttgtaattttggtcccctaagtacaaaaactacaatttt 24476869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 2986996 - 2986934
Alignment:
Q  200 aataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||| ||||||||||||||||||| | | |||| ||||||||| |||| ||||||||||||||    
T  2986996 aatataggctaaagtgcacttttcactctctatgtttcaaaatgttgcgattttggcccccta 2986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 281
Target Start/End: Complemental strand, 810854 - 810806
Alignment:
Q  233 tttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||| |||||||||||||||||||  |||| ||||| ||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaatttt 810806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 20347529 - 20347489
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccctatcttt 235  Q
    |||| |||||||||| || ||||||||||||||||||||||    
T  20347529 aatataataaaggcttaattgcacttttcccccctatcttt 20347489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 258
Target Start/End: Original strand, 21837070 - 21837121
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccc 258  Q
    ||||||||||||||||| || | || ||||||||| |||||||||||||||||    
T  21837070 ggctaaagtgcactttttcctc-taactttcaaaaacttgcaattttggcccc 21837121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 261
Target Start/End: Complemental strand, 38716496 - 38716440
Alignment:
Q  206 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||| |||||||||| || ||||| ||||||||| ||||||||||| |||||||    
T  38716496 ggctaaactgcacttttcacctcctatgtttcaaaatgttgcaattttgacccccta 38716440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 2e-28; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 19752909 - 19753013
Alignment:
Q  203 aaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||||||  ||||||| || ||||||||    
T  19752909 aaaggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagcccc 19753008  T
Q  302 tttgc 306  Q
     ||||    
T  19753009 attgc 19753013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 5778938 - 5778835
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||||     
T  5778938 aggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagcccca 5778839  T
Q  303 ttgc 306  Q
    ||||    
T  5778838 ttgc 5778835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 5777900 - 5778001
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt-tcccccctaagaattagcccctt 303  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||| |    
T  5777900 aggctaaagtgcacttt-cccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5777998  T
Q  304 tgc 306  Q
    |||    
T  5777999 tgc 5778001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 25523068 - 25523171
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||| ||||||||||||| ||||| ||||||||  |||||||||| |||||||||    
T  25523068 aggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccct 25523167  T
Q  303 ttgc 306  Q
    ||||    
T  25523168 ttgc 25523171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23915566 - 23915469
Alignment:
Q  1 cctcttctttctcccattccctcttct-------atcttctccatatatataggggaaagacttccaattaccaattgacgaaaatacccctataagggc 93  Q
    |||||||||||||||||||||||||||       |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||    
T  23915566 cctcttctttctcccattccctcttctctcttctatcttctccatatatat--gggaaagacttccaattaccaattgacgaaaatacccttataagggc 23915469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 22940738 - 22940624
Alignment:
Q  194 aaataaaataaa---ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccta 289  Q
    ||||||||||||   |||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||  ||||||||  ||||||    
T  22940738 aaataaaataaacttggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgaccccta 22940639  T
Q  290 agaattagccccttt 304  Q
    | | |||||||||||    
T  22940638 aaatttagccccttt 22940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 18487004 - 18486901
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||| ||||||| | ||||||||| ||||||||||||||||||||||||   |||||||||||||  |||||||||| |||||||||    
T  18487004 aggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccct 18486905  T
Q  303 ttgc 306  Q
    ||||    
T  18486904 ttgc 18486901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 28538675 - 28538778
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||||| ||| || ||||||||| |||||||||||| |||| ||||||| ||||| ||||||||  |||||||||| |||||||||    
T  28538675 aggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccct 28538774  T
Q  303 ttgc 306  Q
    ||||    
T  28538775 ttgc 28538778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 5730440 - 5730517
Alignment:
Q  205 aggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||||||||||||||||||||||  || ||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  5730440 aggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaattt 5730517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 281
Target Start/End: Original strand, 18485132 - 18485214
Alignment:
Q  200 aataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||| |||| ||| |||| |||| |||||||||||||||||||||||| |||||| ||||||||    
T  18485132 aataaaggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaatttt 18485214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 28539931 - 28539819
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaa 293  Q
    ||||||| ||||| ||||||||| |||||||||||| |||| |||| |||||||||||| ||| |||||||| ||||| ||||||||   |||||||||     
T  28539931 aataaaaaaaaggttaaagtgcatttttcccccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagat 28539832  T
Q  294 ttagcccctttgc 306  Q
    |||| ||||||||    
T  28539831 ttagtccctttgc 28539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 19754233 - 19754129
Alignment:
Q  205 aggctaaagtgcactttt--cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    ||||||||||||| ||||  |||||||| ||||||||| ||||||||||||||||||||| ||| ||||| ||||||||  ||||||| || ||||||||    
T  19754233 aggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccc 19754134  T
Q  302 tttgc 306  Q
     ||||    
T  19754133 attgc 19754129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 36486591 - 36486487
Alignment:
Q  204 aaggctaaagtgcactttt-cccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||| |||||||||||| |||||||| |||| |||| |||||||||||| |||||||||||| ||||| ||||||||   ||||||||| |||| |||    
T  36486591 aaggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccc 36486492  T
Q  302 tttgc 306  Q
    |||||    
T  36486491 tttgc 36486487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 299
Target Start/End: Complemental strand, 25056482 - 25056387
Alignment:
Q  206 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcc 299  Q
    ||||||||||||||||||| | |||| ||||||||| |||||||||||| |||||||||||  ||||| ||||||||  |||||||||| ||||||    
T  25056482 ggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 20214196 - 20214297
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttcccccct-aagaattagccccttt 304  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||| || | ||| |||| ||||| ||||||||  ||||| |||||||| ||| |||    
T  20214196 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccctcaagaattatcccattt 20214295  T
Q  305 gc 306  Q
    ||    
T  20214296 gc 20214297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 16650957 - 16650854
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||||| |||| | |||| |||| |||||||||||| |||||||||||  ||||| ||||||||  |||||||||  ||||||| |    
T  16650957 aggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccat 16650858  T
Q  303 ttgc 306  Q
    ||||    
T  16650857 ttgc 16650854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 306
Target Start/End: Original strand, 1015476 - 1015586
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcc-cccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttc-ccccctaagaatt 295  Q
    ||||||||||| ||| ||||||||||| |||||| |||| ||||  || |||||||||||||||  |||| ||| | ||||||||  |||||||||||||    
T  1015476 aaaataaaggcaaaaatgcacttttcctcccctaacttttaaaaagttacaattttggccccctgtgtacaaaacctacaattttaaccccctaagaatt 1015575  T
Q  296 agcccctttgc 306  Q
    || ||||||||    
T  1015576 agtccctttgc 1015586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 280
Target Start/End: Complemental strand, 5730934 - 5730888
Alignment:
Q  234 ttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 280  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  5730934 ttcaaaaacttccaattttggccccctaagtaccaaaaccacaattt 5730888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 33158096 - 33158174
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    |||||||||||||| ||||  ||||||| ||||||||| |||||||||||| | |||||||||| ||||| ||||||||    
T  33158096 aaggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaatttt 33158174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 18695307 - 18695250
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  18695307 aggctaaagtgcacttttcgccccctatgtttcaaaatattgcgattttggcccccta 18695250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 24332910 - 24333015
Alignment:
Q  203 aaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagccc 300  Q
    ||||| |||||||||||||| |||||| |  |||||||| ||||||||||||||||| || |||| ||||| ||||||||  ||| |||||| ||| |||    
T  24332910 aaaggttaaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaaccc 24333009  T
Q  301 ctttgc 306  Q
    ||||||    
T  24333010 ctttgc 24333015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 25556875 - 25556932
Alignment:
Q  204 aaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||| ||||||| || ||||||| ||||||||| |||||||||||||||||||    
T  25556875 aaggctaaactgcacttatcgcccctatgtttcaaaatgttgcaattttggcccccta 25556932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 33160388 - 33160327
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagta 265  Q
    ||||||||||||||||||||||||| |  |||||||| ||||||||||| ||||||||||||    
T  33160388 aggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagta 33160327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 21835030 - 21835142
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaa 293  Q
    |||||| |||||||||||||||||||| |||| |||  ||| ||||  |||  |||||| ||||||| |||| ||||| ||||||||  ||||||||||     
T  21835030 aataaagtaaaggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagat 21835129  T
Q  294 ttagcccctttgc 306  Q
    ||| |||||||||    
T  21835130 ttaacccctttgc 21835142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 306
Target Start/End: Complemental strand, 20216861 - 20216762
Alignment:
Q  209 taaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||||| |  |||||||| ||||||||||| || |||||  ||| ||||| ||||||||  ||||| |||||||||||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 25055411 - 25055514
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||||||| ||| |||| ||  |||||||||||||  |||||| |||  ||||| ||||||||  |||||||||| ||||||| |    
T  25055411 aggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttagcccat 25055510  T
Q  303 ttgc 306  Q
    ||||    
T  25055511 ttgc 25055514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 25524230 - 25524152
Alignment:
Q  205 aggctaaagtgcacttttcccccc--tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||||  ||  ||| ||||  ||| |||||||||||||||||||| ||||| ||||||||    
T  25524230 aggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaatttt 25524152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 23765419 - 23765473
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    |||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  23765419 aggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23765473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 23815267 - 23815321
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    |||||||| |||||||||| |||||||| ||||||||| ||||||||||||||||    
T  23815267 aggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggcccc 23815321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 42195137 - 42195234
Alignment:
Q  209 taaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctttgc 306  Q
    ||||||||||||||||||| || |||| ||||  |||| |||||||||||||| |||| ||| | ||||||||   ||||||||| |||||||||||||    
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgc 42195234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 31055314 - 31055371
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| |||||||| ||||| ||| |||||||||||||||||||    
T  31055314 aggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggcccccta 31055371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 24025017 - 24025077
Alignment:
Q  202 taaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||| ||| |||||||  ||||||||| |||| ||||||||||||||    
T  24025017 taaaggctaaagtgcactattcgccccctaagtttcaaaatattgcgattttggcccccta 24025077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 306
Target Start/End: Complemental strand, 40255783 - 40255671
Alignment:
Q  196 ataaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaa 293  Q
    |||||| | |||||||||||||||||||||| | ||  ||| |||| |||||||||||| |||||||| |||  |||| ||||||||  ||||||||||     
T  40255783 ataaaagataggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagat 40255684  T
Q  294 ttagcccctttgc 306  Q
    ||| |||| ||||    
T  40255683 ttaaccccattgc 40255671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 25524158 - 25524097
Alignment:
Q  246 caattttggccccctaagtaccaaaaccacaattttc-ccccctaagaattagcccctttgc 306  Q
    ||||||||||| ||||||||| ||||| | ||||||  |||||||||| |||||||||||||    
T  25524158 caattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgc 25524097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 279
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  226 ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatt 279  Q
    ||||| ||||||||| |||||||||||||| ||||| |||| ||||| ||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 40428642 - 40428695
Alignment:
Q  209 taaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||||||| |||||||| ||||||||| |||| ||||||| ||||||    
T  40428642 taaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggtccccta 40428695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 245910 - 245842
Alignment:
Q  194 aaataaaataaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| ||||||||||||||||||||| || ||||| ||| ||||| |||| ||||| | ||||||    
T  245910 aaataaaacaaaggctaaagtgcacttttcgccacctatgttttaaaatgttgcgattttagtccccta 245842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 17469 - 17572
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    |||||||||||||||||| |||||| | |||| |||| ||||||||||||||||||||||||| ||||| ||||||||  ||||| |||||||| |||||    
T  17469 aggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccct 17568  T
Q  303 ttgc 306  Q
    ||||    
T  17569 ttgc 17572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 18877 - 18801
Alignment:
Q  206 ggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||| ||| |||| |||| ||||  |||||||||||| |||||| |||| ||||| | ||||||    
T  18877 ggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataatttt 18801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 5540 - 5442
Alignment:
Q  205 aggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||||||||||||| ||  |||||||| |||||||||||| |||| ||||||| ||||| |||||||| ||||| ||||| ||||||||    
T  5540 aggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 4441 - 4539
Alignment:
Q  205 aggctaaagtgcac-ttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||| ||||||||||||  |||||||| ||| ||||||| ||||| ||||||| ||||  |||||||| ||||||||| | ||||||||    
T  4441 aggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcccc 4539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 23081 - 23181
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaat-tttcccccctaagaattagccccttt 304  Q
    |||||||||||||||||||||| || ||||||||| |||||||||||| ||| |||||||||||||| ||||| || | ||||||||  |||||||| ||    
T  23081 ggctaaagtgcacttttccccc-taactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccatt 23179  T
Q  305 gc 306  Q
    ||    
T  23180 gc 23181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 289
Target Start/End: Complemental strand, 23992 - 23907
Alignment:
Q  205 aggctaaagtgcacttttccc-ccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccta 289  Q
    ||||||||||||||||||  | ||||| ||||||||| |||||||||||||| |||||| || |||||| |||| ||| |||||||    
T  23992 aggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggctccctaaatatcaaaacaacaacttttcccccta 23907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 19487 - 19590
Alignment:
Q  205 aggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||| ||||||||||| |  |||||||| ||||||||||||||||||||||||  ||||| ||||||||   ||||||||| ||| |||||    
T  19487 aggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccct 19586  T
Q  303 ttgc 306  Q
    ||||    
T  19587 ttgc 19590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 233 - 335
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||| ||||||| | |||||||||  |||||||||||| |||||| |||| ||||| | ||||||   ||||||||||||||||||||    
T  233 ggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccctt 332  T
Q  304 tgc 306  Q
    |||    
T  333 tgc 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 3409 - 3307
Alignment:
Q  205 aggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    |||||||||||||||||||||||||  ||||||||| ||| |||||||| |||| || |||| ||||| | ||||||   ||||||||| ||||||||||    
T  3409 aggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagcccctt 3310  T
Q  304 tgc 306  Q
    |||    
T  3309 tgc 3307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 60090 - 60192
Alignment:
Q  206 ggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccctt 303  Q
    ||||||||||||||||||| || ||| |||| |||| |||||||||||| ||||||| |||  ||||| ||||||||  ||||||| || ||||||||||    
T  60090 ggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccctt 60189  T
Q  304 tgc 306  Q
    |||    
T  60190 tgc 60192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 306
Target Start/End: Complemental strand, 61568 - 61458
Alignment:
Q  198 aaaataaaggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaatt 295  Q
    |||| ||| |||||||||||||||||| |||| |  |||||||| ||||||||||| ||||||||||||| ||||| | ||||||  ||||||| || ||    
T  61568 aaaaaaaaagctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgattt 61469  T
Q  296 agcccctttgc 306  Q
    ||||| |||||    
T  61468 agcccttttgc 61458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 301
Target Start/End: Original strand, 37148 - 37244
Alignment:
Q  206 ggctaaagtgcacttttcccccctatctttcaaaatctt-gcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccc 301  Q
    |||||||||||||||||||||| ||||||| ||||  || ||||||||| |||||||||||| ||||| ||||||||  ||||||| || ||||||||    
T  37148 ggctaaagtgcacttttccccc-tatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagcccc 37244  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 7527 - 7414
Alignment:
Q  195 aataaaataaaggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaaga 292  Q
    |||||||||||||||||||||||||| |||||| |||  ||| ||||  || | |||||| ||||||| ||||  |||| ||||||||  ||||||||||    
T  7527 aataaaataaaggctaaagtgcacttgtccccctctaagtttgaaaaagttacgattttgaccccctatgtacagaaactacaattttgaccccctaaga 7428  T
Q  293 attagcccctttgc 306  Q
     |||||||||||||    
T  7427 tttagcccctttgc 7414  T

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Target: scaffold0419 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 2961 - 3017
Alignment:
Q  206 ggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||||||||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  2961 ggctaaagtgcacttttcgccccctatgtttcaaaatgttgcgattttggcccccta 3017  T

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Target: scaffold0227 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 220 - 144
Alignment:
Q  206 ggctaaagtgcacttttcccccc-tatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||| || |||||||||  |||| |||||||||||| | |||  ||||||||||||||    
T  220 ggctaaagtgcacttttccccccctaactttcaaaacgttgcgattttggccccccatgtatgaaaaccacaatttt 144  T

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Target: scaffold1303 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 306
Target Start/End: Original strand, 1438 - 1541
Alignment:
Q  205 aggctaaagtgcacttttccccc-ctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||| ||||||||||| ||| |||| |||| |||||||||||| ||||||| |||  ||||| | ||||||  |||||||||| ||||||| |    
T  1438 aggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccat 1537  T
Q  303 ttgc 306  Q
    ||||    
T  1538 ttgc 1541  T

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Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 281
Target Start/End: Original strand, 13181 - 13267
Alignment:
Q  194 aaataaaataaaggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||  |||  |||||| || |||| |||| ||||| ||||||||    
T  13181 aaataaaataaaggctaaagtgcactttt-ccccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttt 13267  T

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Target: scaffold0093 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 2564 - 2490
Alignment:
Q  207 gctaaagtgcacttttcccccctatctttcaaaat-cttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||| |||||||||||| ||||| || |||||    
T  2564 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccatttt 2490  T

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Target: scaffold0093; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 7187 - 7113
Alignment:
Q  207 gctaaagtgcacttttcccccctatctttcaaaat-cttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||||||||| || |||||||||  |||||||||||| |||||||||||| ||||| || |||||    
T  7187 gctaaagtgcacttttccccc-taactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccatttt 7113  T

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Target: scaffold0607 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 2046 - 2104
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||| |||||||||| |||||||| ||| ||||| |||||||||||||||||||    
T  2046 aaggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggcccccta 2104  T

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Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 4829 - 4755
Alignment:
Q  207 gctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||||||||||| || ||||| |||| |||| | ||||||||||||||||||| |||  |||| ||||||||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaatttt 4755  T

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Target: scaffold0059; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 3695 - 3735
Alignment:
Q  225 cccctatctttcaaaatcttgcaattttggccccctaagta 265  Q
    |||||| ||||||||| ||||||||||||||||||| ||||    
T  3695 cccctaactttcaaaaacttgcaattttggccccctgagta 3735  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 281
Target Start/End: Complemental strand, 49185 - 49109
Alignment:
Q  206 ggctaaagtgcacttttcccccct-atctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt 281  Q
    ||||||| ||||||||||| |||| | |||| |||| ||||||||||||||| ||||||||  ||||| ||||||||    
T  49185 ggctaaattgcacttttccacccttaacttttaaaaacttgcaattttggcctcctaagtattaaaactacaatttt 49109  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 62125 - 62069
Alignment:
Q  203 aaaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    |||||||||| |||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  62125 aaaggctaaactgcatttttcaccccctatgtttcaaaatgttgcaattttggcccc 62069  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 66479 - 66424
Alignment:
Q  204 aaggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccc 258  Q
    ||||||||| |||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  66479 aaggctaaactgcacttttcgccccctatgtttcaaaatgttgtaattttggcccc 66424  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 205 - 306
Target Start/End: Complemental strand, 49535 - 49432
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttt-cccccctaagaattagcccct 302  Q
    ||||||||||||||||||| |||| || |||| ||||  |||||||||||||||||||   |  ||||| ||||||||  |||||||||| ||||| |||    
T  49535 aggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcct 49436  T
Q  303 ttgc 306  Q
    ||||    
T  49435 ttgc 49432  T

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Target: scaffold0179 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 5649 - 5706
Alignment:
Q  205 aggctaaagtgcacttttc-ccccctatctttcaaaatcttgcaattttggcccccta 261  Q
    |||||||| |||||||||| |||||||| ||||||||| || ||||||||||| ||||    
T  5649 aggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggcctccta 5706  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 261
Target Start/End: Original strand, 43815 - 43880
Alignment:
Q  197 taaaataaaggctaaagtgcacttttcccc-cctatctttcaaaatcttgcaattttggcccccta 261  Q
    ||||||||||| |||| |||||||||| || ||||  ||||||||| || ||||||||||||||||    
T  43815 taaaataaaggttaaactgcacttttcgcctcctaagtttcaaaatgtttcaattttggcccccta 43880  T

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