View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16185_high_7 (Length: 235)
Name: NF16185_high_7
Description: NF16185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16185_high_7 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 34 - 221
Target Start/End: Complemental strand, 39625720 - 39625528
Alignment:
| Q |
34 |
aaaataacaaggtggaagactccaaccaccctagaacttgttattaagtaaatatataacatttatctatgaagtcagtatcatgagttcactttacaac |
133 |
Q |
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| T |
39625720 |
aaaataacaaggtggaagactccaaccaccctagaacttgttattaagtaaat-tataacatttatctatgaagtcagtatcatgagttcactctacaac |
39625622 |
T |
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| Q |
134 |
ctaaacccaaatcgccacccactccaactatttgagtcaagtgg------cagaaacttgttacagaagaatgcatttaaaatcaagaaggcag |
221 |
Q |
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| T |
39625621 |
ctaaacccaaatcgccacccactccaactatttgagtcaagtggcatgtacagaaacttgttacagaagaatgcatttaaaatcaagaaggcag |
39625528 |
T |
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