View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF16186_high_6 (Length: 321)
Name: NF16186_high_6
Description: NF16186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF16186_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 49007884 - 49008175
Alignment:
| Q |
1 |
gagcaagaaacaagatcgtggtgtgtgaagacaagaaccgaacacttgctactcaagtggataacttggacagaataaaagttgttgcgggtgttttcat |
100 |
Q |
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| T |
49007884 |
gagcaagaaacaagatcgtggtgtgtgaagacaagaaccgaacacttgctactcaagtggataacttggacagaataaaagttgttgcgggtgttttcat |
49007983 |
T |
|
| Q |
101 |
atcaaatagttctgaggatataacatattacattcaaactaagtttccatctannnnnnngaatccaattaatggagaacttatcaaggatttcattaag |
200 |
Q |
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| T |
49007984 |
atcaaatagttctgaggatataacatattacattcaaactaagtttccatctatttttttgaatccaattaatggagaacttatcaaggatttcattaag |
49008083 |
T |
|
| Q |
201 |
tgcaatactaatccaaaagcaagcatgcaatttaataaaactgttttaggtacaaaaccagcaccaagtgtggatagttatagctcaagagg |
292 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49008084 |
tgcaatactaatccaaaagcaagcatgcaatttaataaaactgttttaggtacaaaaccagcaccaagtgtggatagttatagctcaagagg |
49008175 |
T |
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