View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF16186_low_1 (Length: 423)

Name: NF16186_low_1
Description: NF16186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF16186_low_1
NF16186_low_1
[»] chr3 (31 HSPs)
chr3 (17-416)||(9343535-9343935)
chr3 (139-416)||(9448127-9448404)
chr3 (151-390)||(41985456-41985692)
chr3 (151-390)||(9494860-9495102)
chr3 (160-247)||(9329670-9329757)
chr3 (151-417)||(9617488-9617753)
chr3 (153-417)||(41980684-41980945)
chr3 (304-390)||(9407344-9407430)
chr3 (304-416)||(9352879-9352991)
chr3 (296-407)||(9416543-9416654)
chr3 (162-247)||(9336376-9336461)
chr3 (159-247)||(16011844-16011935)
chr3 (334-390)||(9336548-9336604)
chr3 (151-211)||(9432712-9432772)
chr3 (321-416)||(9655383-9655478)
chr3 (321-416)||(9695642-9695737)
chr3 (296-390)||(9397755-9397849)
chr3 (304-382)||(9425551-9425629)
chr3 (296-386)||(9614009-9614099)
chr3 (304-389)||(9377064-9377149)
chr3 (158-247)||(9395109-9395198)
chr3 (334-390)||(9329844-9329900)
chr3 (321-416)||(9646390-9646485)
chr3 (296-357)||(9347957-9348018)
chr3 (296-357)||(9369611-9369672)
chr3 (321-390)||(9441833-9441902)
chr3 (321-416)||(9432891-9432986)
chr3 (324-416)||(9485995-9486087)
chr3 (196-244)||(9695838-9695886)
chr3 (305-416)||(9340650-9340761)
chr3 (322-356)||(16011768-16011802)
[»] chr1 (6 HSPs)
chr1 (120-383)||(4439651-4439917)
chr1 (158-386)||(4428460-4428691)
chr1 (319-416)||(235206-235303)
chr1 (328-389)||(18991206-18991267)
chr1 (304-416)||(8814388-8814500)
chr1 (320-388)||(251448-251516)
[»] chr2 (2 HSPs)
chr2 (157-256)||(20694463-20694562)
chr2 (304-416)||(20694327-20694439)
[»] chr6 (11 HSPs)
chr6 (120-247)||(213255-213382)
chr6 (291-416)||(7041461-7041586)
chr6 (304-416)||(7046817-7046929)
chr6 (159-238)||(7041341-7041420)
chr6 (159-238)||(7025580-7025659)
chr6 (159-238)||(7012644-7012723)
chr6 (363-416)||(9159521-9159574)
chr6 (363-416)||(9170854-9170907)
chr6 (321-416)||(7012809-7012910)
chr6 (321-416)||(7025745-7025846)
chr6 (363-416)||(7029850-7029903)
[»] chr8 (2 HSPs)
chr8 (141-257)||(13170820-13170936)
chr8 (326-413)||(44688814-44688901)
[»] chr7 (2 HSPs)
chr7 (159-247)||(450315-450403)
chr7 (169-246)||(3679911-3679988)
[»] chr5 (2 HSPs)
chr5 (127-219)||(33541422-33541514)
chr5 (326-409)||(33541652-33541735)


Alignment Details
Target: chr3 (Bit Score: 369; Significance: 0; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 17 - 416
Target Start/End: Original strand, 9343535 - 9343935
Alignment:
Q  17 atatgaaaaagtgaaatgaaggcacatgcaaatttcacttatacaagaatgtattctttaggaaatctctgcccaagtataagatcatttcaa-acgaac 115  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  9343535 atatgaaaaagttaaatgaaggcacatgcaaatttcacttatacaagaatgtattctttaggaaatctctgcccaaatataagatcatttcaatacgaac 9343634  T
Q  116 tagttgcaagataacttacttagttacaaaggcaacttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagagg 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9343635 tagttgcaagataacttacttagttacaaaggcaacttttgacgatccactccggaggtggccagaacaaggtaaaatattcaggacaatcagacagagg 9343734  T
Q  216 tgaaagccgaccttgatccaagtgaaaaacacagttcccacaccacatctttctaaaatacaggaagtcgccaccataagtaaagacaacacaatttcct 315  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9343735 tgaaagccgaccttgatccatgtgaaaaacacagtttccacaccacatctttctaaaatacaggaagtcgccaccataagtaaagacaacacaatttcct 9343834  T
Q  316 ctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttct 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9343835 ctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttaacttcacccacttcttct 9343934  T
Q  416 c 416  Q
    |    
T  9343935 c 9343935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 139 - 416
Target Start/End: Original strand, 9448127 - 9448404
Alignment:
Q  139 ttacaaaggcaacttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagt 238  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||| | |||  |||||| |||||||||| |||||||||| | |||||||||||||    
T  9448127 ttacgaaggctactttggacgatccactctggaggtggccagaacaagttcaaaatttcagggcaatcagacaaaggtgaaagcaggccttgatccaagt 9448226  T
Q  239 gaaaaacacagttcccacaccacatctttctaaaatacaggaagtcgccaccataagtaaagacaacacaatttcctctaggaacacacaaatccgaagc 338  Q
     ||||||||| |||||||||||||| ||| |||||||| ||||||||| ||||| |||||||||||| |||||||||||||||| |||||||||||||||    
T  9448227 aaaaaacacaattcccacaccacatgtttttaaaatactggaagtcgctaccatcagtaaagacaacgcaatttcctctaggaagacacaaatccgaagc 9448326  T
Q  339 agaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  9448327 agaagcagaaaacgaacagtcattccccaagaacaaaacactatcccctaaagttgttaacttcacccatttcttctc 9448404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 151 - 390
Target Start/End: Original strand, 41985456 - 41985692
Alignment:
Q  151 cttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacacagt 250  Q
    |||||||||||||| || ||||||||||| ||| ||||  | || |||||| ||||||||| ||| |||| || || |||||||||||||||||||||      
T  41985456 cttttgacgatccattccggaggtggccaaaacgaggtggagtactcaggataatcagacaaaggggaaacccaacattgatccaagtgaaaaacacaca 41985555  T
Q  251 tcccacaccacatctttctaaaatacaggaagtcgccaccataagtaaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaa 350  Q
    |||||||   |||||    |||||    |||  |   | ||| | ||||||  |||||||||||| |   |||| |||||||||||||||||||||||||    
T  41985556 tcccacaaagcatctggtcaaaatcgtagaatgc---atcatcactaaagatgacacaatttcctttgacaacagacaaatccgaagcagaagcagaaaa 41985652  T
Q  351 cgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  41985653 cgaacatccattccccaagaacaaaactctatcccctaaa 41985692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 151 - 390
Target Start/End: Complemental strand, 9495102 - 9494860
Alignment:
Q  151 cttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacacagt 250  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||| ||| ||| ||| |||| |||||||| | |||||| |||||  || |    
T  9495102 cttttgacgatccaatccggaggtggccagaacaagttaaaatattcaggacagtcacacaaaggcgaaacccgaccttcaaccaagtcaaaaatgcaat 9495003  T
Q  251 tcccacaccacatctttctaaaatacag---gaagtcgccaccataagtaaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcaga 347  Q
    ||||| |    || |||  |||||  |    || |  | |  ||| | ||||||  |||||||| ||| | | ||| |||||||| ||||||||||||||    
T  9495002 tcccatatagaatgttttcaaaattaaaattgaggatggcgtcatcaataaagatgacacaattccctttggaaacgcacaaatcagaagcagaagcaga 9494903  T
Q  348 aaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  9494902 aaacgaacatccattccccaagaacaaaaccctatcccctaaa 9494860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 9329670 - 9329757
Alignment:
Q  160 atccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacac 247  Q
    ||||||||||||||||||||||||||  | |||||||||||| |||| |||| |||||||  | ||||||||||||||||||||||||    
T  9329670 atccactctggaggtggccagaacaacttgaaatattcaggataatccgacaaaggtgaagcctgaccttgatccaagtgaaaaacac 9329757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 151 - 417
Target Start/End: Complemental strand, 9617753 - 9617488
Alignment:
Q  151 cttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacacagt 250  Q
    ||||||| |||||| || |||||||||||||||||| | || ||||||||| ||  ||||| ||  |||||||||||||||||||| ||||| ||||  |    
T  9617753 cttttgaagatccaatccggaggtggccagaacaagttgaagtattcaggataacgagacatagacgaaagccgaccttgatccaaatgaaagacacgat 9617654  T
Q  251 tcccacaccacatctttctaaaataca--ggaagtcgccaccataagtaaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaa 348  Q
    |||||||   ||  || ||| || | |  ||||  ||| | | | | ||||||  |||||||| ||| | | |||||||||||| |||||||||||||||    
T  9617653 tcccacattgcacgttcctagaagagataggaa--cgc-atcgtcaataaagatgacacaattccctttggaaacacacaaatctgaagcagaagcagaa 9617557  T
Q  349 aacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctct 417  Q
    || |||||| ||||| | | ||||||||| |||||||||||| || |  |||||||||| |||||||||    
T  9617556 aatgaacatccattcacaaggaacaaaaccctatcccctaaatttttcaacttcacccatttcttctct 9617488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 417
Target Start/End: Original strand, 41980684 - 41980945
Alignment:
Q  153 tttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacacagttc 252  Q
    |||||||||||| || ||||||||||  |||||| |  | ||||||||| |||| |||| ||| ||||  |||||||||||||||||||||| |||  ||    
T  41980684 tttgacgatccattccggaggtggccctaacaagttgtagtattcaggataatcggacaaaggggaaacacgaccttgatccaagtgaaaaatacacatc 41980783  T
Q  253 ccacaccacatctttctaaaatacaggaagtcgccaccataagtaaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacg 352  Q
    |||||   ||| ||  |||||   |||||  |  |||||  |   |||| || |||||||||| |   |||| ||||||  |||||||||||| ||||||    
T  41980784 ccacatagcattttgttaaaagggaggaatgcatcaccaaca---aagataatacaatttcctttgacaacagacaaatttgaagcagaagcaaaaaacg 41980880  T
Q  353 aacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctct 417  Q
    ||||| ||||||||||||||||||| |||||||||||| | ||  |||| ||||| |||||||||    
T  41980881 aacatccattccccaagaacaaaactctatcccctaaactcgtcaacttgacccatttcttctct 41980945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 9407344 - 9407430
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    |||||||| ||| | | |||||||||||||||||| ||||||||||| |||||| ||||| | ||||||||||| ||||||||||||    
T  9407344 acacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattcacaaagaacaaaaccctatcccctaaa 9407430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 9352879 - 9352991
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttca 403  Q
    |||||||||||| | |||| ||||| |||| || |||||||||||||||||||| || ||||||  |||||||| ||| |||||||  || |  ||||||    
T  9352879 acacaatttcctttgggaagacacagatcccaaccagaagcagaaaacgaacatccactccccacaaacaaaaccctaccccctaattttttcaacttca 9352978  T
Q  404 cccacttcttctc 416  Q
    |||||||||||||    
T  9352979 cccacttcttctc 9352991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 407
Target Start/End: Original strand, 9416543 - 9416654
Alignment:
Q  296 taaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgt 395  Q
    |||||||||||||||| ||| ||| |||||||| |||| | || ||||||||||| ||||||| |||| | |||||||| || |||||||||||| | ||    
T  9416543 taaagacaacacaattccctttagtaacacacatatccaaggctgaagcagaaaatgaacatttattcacgaagaacaacaccctatcccctaaactcgt 9416642  T
Q  396 tgacttcaccca 407  Q
      ||||||||||    
T  9416643 caacttcaccca 9416654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 9336376 - 9336461
Alignment:
Q  162 ccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacac 247  Q
    |||| |||||||||||||||||||  | |||||||| ||| |||| |||| |||||||  | ||||||||||||||||||||||||    
T  9336376 ccacgctggaggtggccagaacaacttgaaatattcgggataatccgacaaaggtgaagcctgaccttgatccaagtgaaaaacac 9336461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 16011935 - 16011844
Alignment:
Q  159 gatccactctggaggtggcca---gaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacac 247  Q
    |||||||| ||||||||||||   ||| ||| ||| ||| || ||| ||||||||| |||||||| ||||||||||||||||||||||||||    
T  16011935 gatccactttggaggtggccataagaataagttaacataatctggataatcagacaaaggtgaaatccgaccttgatccaagtgaaaaacac 16011844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 9336548 - 9336604
Alignment:
Q  334 gaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    |||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||    
T  9336548 gaagcagaagcagaaaacgaacatccattccccaagaacaaaaccttatctcctaaa 9336604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 9432712 - 9432772
Alignment:
Q  151 cttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagaca 211  Q
    ||||||||||||||||| |||||||||||||||||| |  ||||||||||| |||||||||    
T  9432712 cttttgacgatccactccggaggtggccagaacaagttgtaatattcaggataatcagaca 9432772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 9655478 - 9655383
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    |||||||||||||||||| || ||||||||||||||| | |  ||||| |||||||| |||||||||||| |  |  |||||||||| ||||||||    
T  9655478 aacacacaaatccgaagctgatgcagaaaacgaacatccttcgcccaaaaacaaaaccctatcccctaaattcatcaacttcacccatttcttctc 9655383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 9695737 - 9695642
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    ||||||||| || |||||||| ||||| |||||||| || | |||||| |||||||| |||||||||||| | ||  |||| ||||||||||||||    
T  9695737 aacacacaactctgaagcagatgcagagaacgaacagtcttcccccaaaaacaaaaccctatcccctaaattggtcaacttgacccacttcttctc 9695642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 390
Target Start/End: Original strand, 9397755 - 9397849
Alignment:
Q  296 taaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    ||||||| |||||||| ||| | | ||||||||||||| |||| ||||| ||||| |||||| ||||| | |||||||| || ||||||||||||    
T  9397755 taaagacgacacaattccctttggcaacacacaaatccaaagctgaagcggaaaatgaacatccattcacaaagaacaagaccctatcccctaaa 9397849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 9425551 - 9425629
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactat 382  Q
    |||||||| ||| | | |||||||||||||||||| ||||||||||| |||||| ||||| | ||||||||||| ||||    
T  9425551 acacaattccctttggcaacacacaaatccgaagctgaagcagaaaatgaacatccattcacaaagaacaaaaccctat 9425629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 296 - 386
Target Start/End: Complemental strand, 9614099 - 9614009
Alignment:
Q  296 taaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccc 386  Q
    |||||| ||||||||||||| | | || ||||| ||| ||||||||||||||||| |||||| || |||||||||| |||||  |||||||    
T  9614099 taaagataacacaatttcctttggtaagacacagatctgaagcagaagcagaaaatgaacatccactccccaagaaaaaaaccatatcccc 9614009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 9377064 - 9377149
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaa 389  Q
    |||||||||||| | |||| ||||| |||| |||||||||||| |||||||||| || ||||||  |||||||  |||||||||||    
T  9377064 acacaatttcctttgggaagacacagatcccaagcagaagcaggaaacgaacatccactccccacaaacaaaatcctatcccctaa 9377149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 247
Target Start/End: Original strand, 9395109 - 9395198
Alignment:
Q  158 cgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacac 247  Q
    |||||||||||||||| |||| |||||   | ||||  |||||| | ||||||||||| |||| |||||| |||||||||||||||||||    
T  9395109 cgatccactctggaggcggcccgaacatcttcaaatgatcaggatagtcagacagaggggaaatccgaccctgatccaagtgaaaaacac 9395198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 390
Target Start/End: Original strand, 9329844 - 9329900
Alignment:
Q  334 gaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    ||||||||||||||||||||| || |||||||||||||||||||  |||| ||||||    
T  9329844 gaagcagaagcagaaaacgaatatccattccccaagaacaaaaccttatctcctaaa 9329900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 9646485 - 9646390
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    |||||||||||||||||| || ||||||||||||||| | |  || || |||||||| |||||||||||| |  |  |||||||||| ||||||||    
T  9646485 aacacacaaatccgaagctgatgcagaaaacgaacatccttcgccaaaaaacaaaaccctatcccctaaattcatcaacttcacccatttcttctc 9646390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 9347957 - 9348018
Alignment:
Q  296 taaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacat 357  Q
    ||||||| |||||||||||| | |||| ||| | ||| ||||||||||||||||||||||||    
T  9347957 taaagacgacacaatttcctttcggaatacatagatctgaagcagaagcagaaaacgaacat 9348018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 357
Target Start/End: Original strand, 9369611 - 9369672
Alignment:
Q  296 taaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacat 357  Q
    ||||||| |||||||||||| | |||| ||| | ||| ||||||||||||||||||||||||    
T  9369611 taaagacgacacaatttcctttcggaatacatagatctgaagcagaagcagaaaacgaacat 9369672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 390
Target Start/End: Complemental strand, 9441902 - 9441833
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    |||||||| |||| | || ||||||||||| ||||||| |||| | ||||||||||| ||||||||||||    
T  9441902 aacacacatatccaaggctgaagcagaaaatgaacatttattcacaaagaacaaaaccctatcccctaaa 9441833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 416
Target Start/End: Original strand, 9432891 - 9432986
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttga-cttcacccacttcttctc 416  Q
    ||||||||||||||| || ||||||||||| ||| |||||  ||| | ||||||||| ||||| |||||| || |||| ||||||||||||| ||||    
T  9432891 aacacacaaatccgaggctgaagcagaaaaggaatattcaagccctatgaacaaaaccctatctcctaaa-ttcttgatcttcacccacttcctctc 9432986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 416
Target Start/End: Complemental strand, 9486087 - 9485995
Alignment:
Q  324 acacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    ||||||||||||||| ||||||||||| | |||||| | |||||| ||||||||  ||||||| ||| || |   || |||||||||||||||    
T  9486087 acacaaatccgaagccgaagcagaaaaagcacattcttcccccaaaaacaaaaccatatcccccaaatttctcacctccacccacttcttctc 9485995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 9695886 - 9695838
Alignment:
Q  196 tcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaa 244  Q
    |||||| || |||||| |||||||| |||||||||||||||||||||||    
T  9695886 tcaggataaccagacaaaggtgaaacccgaccttgatccaagtgaaaaa 9695838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 416
Target Start/End: Original strand, 9340650 - 9340761
Alignment:
Q  305 cacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcac 404  Q
    ||||||||||| |  ||| ||| | ||| |||||||||||||||||||||||| ||  ||| | ||| ||||| |||||||| ||| |  |  |||||||    
T  9340650 cacaatttcctttttgaatacatagatctgaagcagaagcagaaaacgaacatccacgcccaatgaaaaaaaccctatccccgaaattcctcaacttcac 9340749  T
Q  405 ccacttcttctc 416  Q
    ||||||||||||    
T  9340750 ccacttcttctc 9340761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 356
Target Start/End: Complemental strand, 16011802 - 16011768
Alignment:
Q  322 acacacaaatccgaagcagaagcagaaaacgaaca 356  Q
    |||| ||||||||||||||||||||||||||||||    
T  16011802 acacccaaatccgaagcagaagcagaaaacgaaca 16011768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 5e-38; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 120 - 383
Target Start/End: Original strand, 4439651 - 4439917
Alignment:
Q  120 tgcaagataacttacttagttacaaaggcaacttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaa 219  Q
    ||||||||||| |||| | |||  || ||||| || | |||||||||||| |||||||||||||||| ||||||| |||||||||||||||| ||| |||    
T  4439651 tgcaagataacatactcatttaggaacgcaacattcgccgatccactctgcaggtggccagaacaagttaaaatagtcaggacaatcagacaaaggcgaa 4439750  T
Q  220 agccgaccttgatccaagtgaaaaacacagttcccacaccacatcttt------ctaaaatacaggaagtcgccaccataagtaaagacaacacaatttc 313  Q
    |||   ||||||||||||| |||||||||||||||| |   ||| |||       ||||||  |||||   | || ||| | ||||||  |||||||| |    
T  4439751 agctttccttgatccaagtcaaaaacacagttcccatattgcatgtttttaccattaaaattgaggaa---ggcatcatcaataaagatgacacaattcc 4439847  T
Q  314 ctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatc 383  Q
    || ||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  4439848 ctttagaaacacacaaatccgaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatc 4439917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 158 - 386
Target Start/End: Original strand, 4428460 - 4428691
Alignment:
Q  158 cgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacacagttcccaca 257  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||| | |||| | | ||||||||||| |||||||||||||||| |    
T  4428460 cgatccactctgtaggtggccagaacaagttaaaatattccggacaatcagacaaaggcgtaagctggcgttgatccaagtcaaaaacacagttcccata 4428559  T
Q  258 ccacatctttctaaaat---acaggaagtcgccaccataagtaaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaa 354  Q
       ||| ||| || |||   |  ||| |  | || ||| | ||||||  |||||||| ||| ||| |||| |||| || |||||||| ||||||||| ||    
T  4428560 ttgcatgtttttacaattaaagtggaggaaggcatcatcaataaagatgacacaattccctttagtaacagacaactcagaagcagaggcagaaaacaaa 4428659  T
Q  355 cattcattccccaagaacaaaacactatcccc 386  Q
    ||| |||||||||| |||||||| ||||||||    
T  4428660 catccattccccaaaaacaaaaccctatcccc 4428691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 319 - 416
Target Start/End: Original strand, 235206 - 235303
Alignment:
Q  319 ggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    |||||||||||||||||||||||||||||||||||||||     ||||||||| ||||| |||||||||||| |||   |||||||||||||||||||    
T  235206 ggaacacacaaatccgaagcagaagcagaaaacgaacatagcaaccccaagaagaaaactctatcccctaaatttgccaacttcacccacttcttctc 235303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 328 - 389
Target Start/End: Original strand, 18991206 - 18991267
Alignment:
Q  328 aaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaa 389  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||    
T  18991206 aaatcagaagcagaagcagaaaacgaacatccattccccaagaacaaaaccctattccctaa 18991267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 8814500 - 8814388
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttca 403  Q
    |||||||| ||| | ||||||||||||||| |||||||||||||||| |||||      |||||| |||||||| |||||||||||| | |   ||||||    
T  8814500 acacaattccctttgggaacacacaaatccaaagcagaagcagaaaatgaacacaaggaccccaaaaacaaaactctatcccctaaattcgccaacttca 8814401  T
Q  404 cccacttcttctc 416  Q
    |||||||||||||    
T  8814400 cccacttcttctc 8814388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 388
Target Start/End: Complemental strand, 251516 - 251448
Alignment:
Q  320 gaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatccccta 388  Q
    |||||||||||||||| |||||| ||||||| ||||||     ||||||||||||||| ||||||||||    
T  251516 gaacacacaaatccgatgcagaaacagaaaatgaacatagccaccccaagaacaaaactctatccccta 251448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 20694562 - 20694463
Alignment:
Q  157 acgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacacagttcccac 256  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||| |||| |||| ||||||||||||| |||||||||| || ||||||||||| ||||    
T  20694562 acgatccactcaggaggaggccagaacaagttaaaatattcaggataatcggacaaaggtgaaagccgatcttgatccaaatggaaaacacagttaccac 20694463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 20694439 - 20694327
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttca 403  Q
    |||||||| ||| | | ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||| ||| ||||  |  |||    
T  20694439 acacaattccctttggcaacacacaaatccgaagcagaagcagaaaacgaacatccattccccaaaaacaaaaccctatcccccaaacttgtcaaactca 20694340  T
Q  404 cccacttcttctc 416  Q
    |||| ||||||||    
T  20694339 cccatttcttctc 20694327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 5e-23; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 120 - 247
Target Start/End: Complemental strand, 213382 - 213255
Alignment:
Q  120 tgcaagataacttacttagttacaaaggcaacttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaa 219  Q
    ||||||||||| |||| | |||| ||  || ||||||||||||||||| |||||||||||||||||| |  || |||||||| ||| ||||| || ||||    
T  213382 tgcaagataacatactcacttacgaattcagcttttgacgatccactcgggaggtggccagaacaagttggaaaattcaggagaattagacacagatgaa 213283  T
Q  220 agccgaccttgatccaagtgaaaaacac 247  Q
    || ||||||||||||||||| |||||||    
T  213282 agtcgaccttgatccaagtgcaaaacac 213255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 416
Target Start/End: Original strand, 7041461 - 7041586
Alignment:
Q  291 ataagtaaagacaacacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaa 390  Q
    |||| ||||||  |||||||| ||| | | ||| |||||||||||||||||| |||| ||||||||| | |  |||||||||||||| ||||||||||||    
T  7041461 ataactaaagatgacacaattccctttggcaacgcacaaatccgaagcagaaacagagaacgaacatacttctcccaagaacaaaaccctatcccctaaa 7041560  T
Q  391 gttgttgacttcacccacttcttctc 416  Q
     | ||  |||||||||||||||||||    
T  7041561 ctagtcaacttcacccacttcttctc 7041586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 304 - 416
Target Start/End: Original strand, 7046817 - 7046929
Alignment:
Q  304 acacaatttcctctaggaacacacaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttca 403  Q
    |||||||| ||| | | |||| ||||||| |||  ||||||||||||||||||||   ||||||||||||||||  ||||||||||| | ||| ||||||    
T  7046817 acacaattccctttggcaacatacaaatctgaaaaagaagcagaaaacgaacattttatccccaagaacaaaactttatcccctaaactcgttaacttca 7046916  T
Q  404 cccacttcttctc 416  Q
    |||||||||||||    
T  7046917 cccacttcttctc 7046929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 7041341 - 7041420
Alignment:
Q  159 gatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagt 238  Q
    |||||||| ||||||||||||||||||| |  ||||||||||| ||||||| ||||| ||| ||||||||||||||||||    
T  7041341 gatccactttggaggtggccagaacaagttggaatattcaggataatcagatagaggcgaatgccgaccttgatccaagt 7041420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 7025580 - 7025659
Alignment:
Q  159 gatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagt 238  Q
    |||||||||||||||||||||||||||| |  ||||||||||| |||| |||| | | ||| |||||||| |||||||||    
T  7025580 gatccactctggaggtggccagaacaagttggaatattcaggataatcggacaaaagcgaatgccgacctagatccaagt 7025659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 7012644 - 7012723
Alignment:
Q  159 gatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagt 238  Q
    ||||||||||| ||||||||| |||||| |  ||||||| ||||||||||||| | | ||| | ||||||||||||||||    
T  7012644 gatccactctgcaggtggccataacaagttggaatattcgggacaatcagacaaaagcgaatgtcgaccttgatccaagt 7012723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 416
Target Start/End: Complemental strand, 9159574 - 9159521
Alignment:
Q  363 ccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    ||||||||||||||| |||||||||||| | ||| | |||||||||||||||||    
T  9159574 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctc 9159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 9170854 - 9170907
Alignment:
Q  363 ccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    ||||||||||||||| |||||||||||| | ||| | |||||||||||||||||    
T  9170854 ccccaagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctc 9170907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 416
Target Start/End: Original strand, 7012809 - 7012910
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattcccc------aagaacaaaacactatcccctaaagttgttgacttcacccacttcttc 414  Q
    ||||||||||||||||||| | ||||||||||||||| |   ||||      ||||||||||  ||||| |||||| ||||  |||||||||||||||||    
T  7012809 aacacacaaatccgaagcacaggcagaaaacgaacataccaaccccaaccccaagaacaaaatcctatctcctaaacttgtcaacttcacccacttcttc 7012908  T
Q  415 tc 416  Q
    ||    
T  7012909 tc 7012910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 416
Target Start/End: Original strand, 7025745 - 7025846
Alignment:
Q  321 aacacacaaatccgaagcagaagcagaaaacgaacattcattcccc------aagaacaaaacactatcccctaaagttgttgacttcacccacttcttc 414  Q
    |||||||||||| |||||| ||||||||||||||||| |   ||||      ||||||||||| ||||| |||||| | ||  |||||||||||||||||    
T  7025745 aacacacaaatctgaagcacaagcagaaaacgaacataccaaccccaaccccaagaacaaaaccctatctcctaaactcgtcaacttcacccacttcttc 7025844  T
Q  415 tc 416  Q
    ||    
T  7025845 tc 7025846  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 363 - 416
Target Start/End: Original strand, 7029850 - 7029903
Alignment:
Q  363 ccccaagaacaaaacactatcccctaaagttgttgacttcacccacttcttctc 416  Q
    ||||||||||||||| |||||||| ||| | ||  |||||||||||||||||||    
T  7029850 ccccaagaacaaaaccctatccccgaaactcgtcaacttcacccacttcttctc 7029903  T

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Target: chr8 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 141 - 257
Target Start/End: Complemental strand, 13170936 - 13170820
Alignment:
Q  141 acaaaggcaacttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtga 240  Q
    ||||| ||| || ||||||||||| |||||||||||||| |||||| | || || || ||||||||||| | ||| |||||||| | |||||||||||||    
T  13170936 acaaatgcagctgttgacgatccattctggaggtggccaaaacaagttgaagtactcgggacaatcagataaaggggaaagccggcattgatccaagtga 13170837  T
Q  241 aaaacacagttcccaca 257  Q
    ||||||||  |||||||    
T  13170836 aaaacacacatcccaca 13170820  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 413
Target Start/End: Complemental strand, 44688901 - 44688814
Alignment:
Q  326 acaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccacttctt 413  Q
    ||||||||||||||| || |||||| ||| |||||||||||||||||||||  |||| ||||||| | ||| |||| ||||| |||||    
T  44688901 acaaatccgaagcagtagtagaaaatgaatattcattccccaagaacaaaattctattccctaaactcgttaactttacccatttctt 44688814  T

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Target: chr7 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 450403 - 450315
Alignment:
Q  159 gatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaacac 247  Q
    |||||| ||||||||||||||||||||  | ||||| || ||| |||||||||  ||||||| ||||||||||||||||||||||||||    
T  450403 gatccaatctggaggtggccagaacaacttgaaataatccggataatcagacaagggtgaaacccgaccttgatccaagtgaaaaacac 450315  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 3679911 - 3679988
Alignment:
Q  169 ggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaaagccgaccttgatccaagtgaaaaaca 246  Q
    |||||||||||||| ||| | |||||||||| |  |||||||| | | |||| |||||||| ||||||||| ||||||    
T  3679911 ggaggtggccagaataagctgaaatattcagcatcatcagacataagcgaaatccgaccttcatccaagtgcaaaaca 3679988  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 33541422 - 33541514
Alignment:
Q  127 taacttacttagttacaaaggcaacttttgacgatccactctggaggtggccagaacaaggtaaaatattcaggacaatcagacagaggtgaa 219  Q
    |||| |||| |||||| || ||| |||||||||||||||||||||||  ||  ||||||| | |||||||| ||| |||| |||| |||||||    
T  33541422 taacatactcagttacgaatgcagcttttgacgatccactctggaggctgcgggaacaagttgaaatattccggataatcggacaaaggtgaa 33541514  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 409
Target Start/End: Original strand, 33541652 - 33541735
Alignment:
Q  326 acaaatccgaagcagaagcagaaaacgaacattcattccccaagaacaaaacactatcccctaaagttgttgacttcacccact 409  Q
    ||||||| |||||||| |||||||| ||||| |||  ||| |||||||||||| |||| |||||| |  || ||||||||||||    
T  33541652 acaaatcagaagcagatgcagaaaaggaacagtcagcccctaagaacaaaacaatatctcctaaactctttaacttcacccact 33541735  T

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